Prupe.6G161600_v2.0.a1

Egg cell-secreted protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
15035874 .. 15036810
937 bp
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UTR
Exon/CDS
Intron
Prupe.6G161600.1

Sequence Viewer

Length: 519 bp
ATGTTCTTCACTCAAGCTCTGAATATTCATATACAAATATTACAAACAGTAACAGAGAATACCATGGCTTTCAAAAATGCGGCTTTCCTCCTCTTGATGACCACAATGTGCCTCATAATGAGTGCAAACAATGCAATTGCCAATGCGAGGAACATGGCTGCTGTGGGGATCAAAACCGGCAGCCAAGGCGGTGAAGGCGGCAGCGGTGGCCAAGGGGGCTTAGGGGAGTGCTGGAATGCGCTTGTGGAGCTGAAATCATGTTCAAATGAAGTGGTTCTGTTTTTCCTCAACGGGCAGGCTGATATTGGGACTGACTGTTGCAAAGCCATTGCCACAATCACGCACCACTGCTGGCCTGCCATGCTGACGTCGCTTGGCTTCACGGCGGAGGAGGGTAACATTTTGCGAGGCCACTGTGATGCCGCTTCCGCTGCTGGTTCTACTGATAATGCTTCTTCCTCCGCCCCGGCTTCGCCTCCAAGTGCAGCTGCTTCCTCCGCCGCTACCCCAGCCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

173

Amino Acids

17.5

Weight (kDa)

5.14

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 371
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 1 cut(s) 208
AcyI GRCGYC 1 cut(s) 368
AdeI CACNNNGTG 1 cut(s) 108
AfiI CCNNNNNNNGG 1 cut(s) 147
AgsI TTSAA 2 cut(s) 73, 264
AluBI AGCT 3 cut(s) 17, 250, 488
AluI AGCT 3 cut(s) 17, 250, 488
AlwI GGATC 1 cut(s) 176
AoxI GGCC 3 cut(s) 208, 353, 409
ApeKI GCWGC 6 cut(s) 158, 180, 201, 431, 485, 488
Asp700I GAANNNNTTC 1 cut(s) 273
AspLEI GCGC 1 cut(s) 241
AsuC2I CCSGG 1 cut(s) 467
AsuHPI GGTGA 1 cut(s) 203
BalI TGGCCA 1 cut(s) 210
BbvI GCAGC 6 cut(s) 145, 192, 213, 418, 475, 497
BceAI ACGGC 1 cut(s) 399
BcnI CCSGG 1 cut(s) 467
BglI GCCNNNNNGGC 1 cut(s) 216
Bme1390I CCNGG 1 cut(s) 467
BmrFI CCNGG 1 cut(s) 467
BmsI GCATC 1 cut(s) 409
Bpu10I CCTNAGC 1 cut(s) 220
BpuMI CCSGG 1 cut(s) 467
BsaHI GRCGYC 1 cut(s) 368
BsaJI CCNNGG 4 cut(s) 63, 184, 211, 465
Bsc4I CCNNNNNNNGG 1 cut(s) 147
Bse118I RCCGGY 1 cut(s) 176
Bse3DI GCAATG 1 cut(s) 327
BseDI CCNNGG 4 cut(s) 63, 184, 211, 465
BseLI CCNNNNNNNGG 1 cut(s) 147
BseMI GCAATG 1 cut(s) 327
BseRI GAGGAG 2 cut(s) 80, 404
BseXI GCAGC 6 cut(s) 145, 192, 213, 418, 475, 497
BseYI CCCAGC 1 cut(s) 508
BsgI GTGCAG 1 cut(s) 504
BshFI GGCC 3 cut(s) 210, 355, 411
BsiSI CCGG 2 cut(s) 177, 467
BslFI GGGAC 1 cut(s) 322
BslI CCNNNNNNNGG 1 cut(s) 147
BsmFI GGGAC 1 cut(s) 322
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 3 cut(s) 210, 355, 411
Bsp143I GATC 1 cut(s) 168
Bsp19I CCATGG 1 cut(s) 63
BspANI GGCC 3 cut(s) 210, 355, 411
BspPI GGATC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 327
BsrFI RCCGGY 1 cut(s) 176
BssAI RCCGGY 1 cut(s) 176
BssECI CCNNGG 4 cut(s) 63, 184, 211, 465
BssMI GATC 1 cut(s) 168
BssNI GRCGYC 1 cut(s) 368
BssT1I CCWWGG 3 cut(s) 63, 184, 211
Bst4CI ACNGT 3 cut(s) 49, 317, 416
BstACI GRCGYC 1 cut(s) 368
BstAPI GCANNNNNTGC 1 cut(s) 131
BstC8I GCNNGC 3 cut(s) 297, 353, 357
BstDEI CTNAG 1 cut(s) 220
BstDSI CCRYGG 1 cut(s) 63
BstHHI GCGC 1 cut(s) 241
BstKTI GATC 1 cut(s) 171
BstMBI GATC 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 465
BstV1I GCAGC 6 cut(s) 145, 192, 213, 418, 475, 497
BsuRI GGCC 3 cut(s) 210, 355, 411
BtgI CCRYGG 1 cut(s) 63
BtsI GCAGTG 1 cut(s) 346
BtsIMutI CAGTG 2 cut(s) 346, 412
Cac8I GCNNGC 3 cut(s) 297, 353, 357
CfoI GCGC 1 cut(s) 241
Cfr10I RCCGGY 1 cut(s) 176
CspCI CAANNNNNGTGG 2 cut(s) 252, 287
CviAII CATG 4 cut(s) 64, 154, 258, 361
DdeI CTNAG 1 cut(s) 220
DpnI GATC 1 cut(s) 170
DpnII GATC 1 cut(s) 168
DraIII CACNNNGTG 1 cut(s) 108
EaeI YGGCCR 1 cut(s) 208
EciI GGCGGA 3 cut(s) 401, 451, 487
Eco130I CCWWGG 3 cut(s) 63, 184, 211
EcoT14I CCWWGG 3 cut(s) 63, 184, 211
ErhI CCWWGG 3 cut(s) 63, 184, 211
FaeI CATG 4 cut(s) 67, 157, 261, 364
FaiI YATR 7 cut(s) 30, 32, 65, 116, 155, 259, 362
FaqI GGGAC 1 cut(s) 322
FatI CATG 4 cut(s) 63, 153, 257, 360
GlaI GCGC 1 cut(s) 240
GsaI CCCAGC 1 cut(s) 512
HaeIII GGCC 3 cut(s) 210, 355, 411
HapII CCGG 2 cut(s) 177, 467
HhaI GCGC 1 cut(s) 241
Hin1I GRCGYC 1 cut(s) 368
Hin1II CATG 4 cut(s) 67, 157, 261, 364
Hin6I GCGC 1 cut(s) 239
HinP1I GCGC 1 cut(s) 239
HpaII CCGG 2 cut(s) 177, 467
HphI GGTGA 1 cut(s) 203
Hpy188I TCNGA 1 cut(s) 21
Hpy188III TCNNGA 1 cut(s) 94
Hpy99I CGWCG 1 cut(s) 373
HpyAV CCTTC 1 cut(s) 188
HpyCH4III ACNGT 3 cut(s) 49, 317, 416
HpyCH4IV ACGT 1 cut(s) 368
HpyCH4V TGCA 4 cut(s) 125, 134, 321, 485
HpyF3I CTNAG 1 cut(s) 220
HpySE526I ACGT 1 cut(s) 368
Hsp92I GRCGYC 1 cut(s) 368
Hsp92II CATG 4 cut(s) 67, 157, 261, 364
HspAI GCGC 1 cut(s) 239
Kzo9I GATC 1 cut(s) 168
LmnI GCTCC 1 cut(s) 247
LpnPI CCDG 7 cut(s) 190, 217, 281, 337, 369, 420, 480
Lsp1109I GCAGC 6 cut(s) 145, 192, 213, 418, 475, 497
LweI GCATC 1 cut(s) 409
MaeII ACGT 1 cut(s) 368
MaeIII GTNAC 2 cut(s) 49, 395
MalI GATC 1 cut(s) 170
MboI GATC 1 cut(s) 168
MboII GAAGA 1 cut(s) 447
MfeI CAATTG 1 cut(s) 135
MlsI TGGCCA 1 cut(s) 210
MluCI AATT 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 210
Mox20I TGGCCA 1 cut(s) 210
MroXI GAANNNNTTC 1 cut(s) 273
MscI TGGCCA 1 cut(s) 210
MseI TTAA 1 cut(s) 517
MslI CAYNNNNRTG 1 cut(s) 417
Msp20I TGGCCA 1 cut(s) 210
MspA1I CMGCKG 3 cut(s) 204, 431, 488
MspI CCGG 2 cut(s) 177, 467
MspR9I CCNGG 1 cut(s) 467
MunI CAATTG 1 cut(s) 135
Mva1269I GAATGC 1 cut(s) 241
NciI CCSGG 1 cut(s) 467
NcoI CCATGG 1 cut(s) 63
NdeII GATC 1 cut(s) 168
NlaIII CATG 4 cut(s) 67, 157, 261, 364
PctI GAATGC 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 273
PspFI CCCAGC 1 cut(s) 508
PvuII CAGCTG 1 cut(s) 488
RseI CAYNNNNRTG 1 cut(s) 417
SaqAI TTAA 1 cut(s) 517
Sau3AI GATC 1 cut(s) 168
ScrFI CCNGG 1 cut(s) 467
SetI ASST 4 cut(s) 19, 252, 371, 490
SfaNI GCATC 1 cut(s) 409
SmiMI CAYNNNNRTG 1 cut(s) 417
SmlI CTYRAG 1 cut(s) 12
SmoI CTYRAG 1 cut(s) 12
Sse9I AATT 1 cut(s) 135
SspI AATATT 2 cut(s) 25, 39
StyD4I CCNGG 1 cut(s) 465
StyI CCWWGG 3 cut(s) 63, 184, 211
TaaI ACNGT 3 cut(s) 49, 317, 416
TaiI ACGT 1 cut(s) 371
TasI AATT 1 cut(s) 135
TauI GCSGC 4 cut(s) 83, 201, 425, 503
Tru1I TTAA 1 cut(s) 517
Tru9I TTAA 1 cut(s) 517
TscAI CASTG 2 cut(s) 353, 419
TseI GCWGC 6 cut(s) 158, 180, 201, 431, 485, 488
TspDTI ATGAA 2 cut(s) 17, 282
TspRI CASTG 2 cut(s) 353, 419
XmnI GAANNNNTTC 1 cut(s) 273
ZraI GACGTC 1 cut(s) 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.