Prupe.6G288500_v2.0.a1

Lipase (class 3)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
26682449 .. 26684605
2157 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G288500.1

Sequence Viewer

Length: 1788 bp
ATGGCATGCACTTCATTATCAATTCCTACCTCTCCGGCTAACTCAACCAAAAGAACAAACCCCATCTTCAAAGACCACGTTCCCATCCGCAGGTCTTGTTCAGATCATAACCATCTTTGTTCTTACACCAATCGTATTCGTGCCGCATCATCAACACAACCAAACAACAGCCGTTCCATAGGAATTTTCCCTTTTAAAATTTCAAGTTCCCTTGTCCCAAATTGTCTTGGCTCATTTTTGTTTGGTCCGTATAAGCCTATGGACGTGGTGGAAAAGAACATGAACATGAATATGGTGGAGAAGTCTGGGGAGAGTACTGGTAATGAAGGAGAGGAGATAAAGAGAGCTAATTGGATGGAGTGGCTTGTGGAACTCAGAAGTAAGTGGAGCAATATATGGCAGCAAAAACAGGTTGAGGATGAGGAGGAAGACAACAATAATGGAGAGGAGGGTTGCTGTGCAGAGGGTTGTAGTTTAGAAGAAAAGAATGGAGAAAAGGGATACAAATCATATGATCCTGAATCTTTCTCAAGATTTTTGGTTAGAGTTCCATGGTCTGAAACCAAGCTATTTTCTAAACTAGCTTTCTTGTGCAACATGGTTTATGTGATACCAGAGATCAAGGGTGAGGTTTTGCAGAGATATTATGACCTACAATTTGTAACATCTTCATTCGAAAAGAAAGCCGAGGCAGCTGCTTACATGGAAGCTTCAACAATGACAGTAGTGGTAGCAGCAAACGAAAGTGAAAAACATGAGACAACGAAGGACTTTCGAGCAAGCCAGCATTCCTCACCATGTGAATGGCTTGTTTGTGATGACTCTAGTACTTTTACTCGCTGCTTTGTGGTTCAGAATTCACATGGCACATTAATCTCGTTGTTTTTCACCCAAGAAGATATTTGTGCAATTCTTGACTTGCAGGGACTAGACTCCCATGCATCTTGGCAGGCATACCTCTTATTCGAACCGACTAAATTTGAGGGGACAAATGTACTTGTTCACAGAGGAATCTATGAAGCAGCAGAGGCAATGTACGAGCAATTCATGCCAGAAATTTTAGACCACTTAGAAAGAAAGGGGGAGCAAGCGAAGTTTCAATTTACCGGCCATTGCATTGGAGGAAGCATTGCTCTTCTAGTCCACTTGATGCTACTAACTAGGAACCTTGTCAAGCCCTCCACTCTTCGGCCAGTTGTCACGTTCGGCTCACCATTTGTGTTCTGCAAAGGGCACAAAATATTTGAGCAGCTGAGTTTGGATGAGAGTGATCACATCCATTGTGTGATGATGCACAGAGATATTGTCCCTAGAGCGTTCTCTTCCAACTACAATAACCAAGTGATTACACTCCTAAGGCGTTTAAATGGTTCATTTCAAACACACCCTTGTCTAATTAAAAGTAAACGTTTGTACTCGCCAATGGGCAATCTATTCATTCTCCAACCTGATGAAAAGTCATCTCCTCCACACCCTCTGCTCCCTCCGGGGAGTGCCCTCTATGTTTTGAACAAAACACAGTGTGGGTCCTCTTCAGGTGTCTTGATGGCCTTCTTGAATTCCCCACATCCACTAGAAACCTTTAGTGACCCTGCAGCTTATGGTTCAGAAGGTACAATCTTACGGGACCATGACTCTTGCAACTATCTAAAGGCTATGAATATGGTTCTAAGGCAACACACAAGGATGGTTGTGAGGAAAGTGAGGAAGCAAAGGAATCTCTTGTGGCCGATCCTTACTTCACCATCTCCACACTCATGGAATGATGAAGATAAAAGTGACCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

596

Amino Acids

67.44

Weight (kDa)

6.33

Isoelectric Point (pI)

50.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 81
AciI CCGC 2 cut(s) 88, 144
AclI AACGTT 1 cut(s) 1408
AclWI GGATC 2 cut(s) 509, 1726
AcoI YGGCCR 3 cut(s) 1108, 1190, 1727
AcsI RAATTY 6 cut(s) 183, 198, 856, 977, 1056, 1558
AcuI CTGAAG 1 cut(s) 1518
AdeI CACNNNGTG 2 cut(s) 800, 1523
AfaI GTAC 6 cut(s) 316, 829, 996, 1037, 1415, 1615
AfiI CCNNNNNNNGG 2 cut(s) 90, 1188
AgsI TTSAA 7 cut(s) 70, 204, 714, 1100, 1379, 1510, 1558
AjiI CACGTC 1 cut(s) 265
AluBI AGCT 7 cut(s) 347, 568, 584, 695, 710, 1252, 1598
AluI AGCT 7 cut(s) 347, 568, 584, 695, 710, 1252, 1598
Alw26I GTCTC 1 cut(s) 752
AlwI GGATC 2 cut(s) 509, 1726
AoxI GGCC 4 cut(s) 1108, 1190, 1548, 1727
ApeKI GCWGC 8 cut(s) 400, 692, 695, 734, 840, 1022, 1249, 1595
ApoI RAATTY 6 cut(s) 183, 198, 856, 977, 1056, 1558
ArsI GACNNNNNNTTYG 2 cut(s) 641, 673
AseI ATTAAT 1 cut(s) 872
AspS9I GGNCC 3 cut(s) 245, 1527, 1627
AsuC2I CCSGG 1 cut(s) 1488
AsuHPI GGTGA 5 cut(s) 638, 786, 880, 1203, 1734
AsuII TTCGAA 2 cut(s) 675, 966
AvaII GGWCC 3 cut(s) 245, 1527, 1627
AxyI CCTNAGG 1 cut(s) 1355
BaeGI GKGCMC 2 cut(s) 1236, 1498
BbsI GAAGAC 1 cut(s) 435
BbvI GCAGC 8 cut(s) 412, 682, 704, 746, 827, 1034, 1261, 1607
BccI CCATC 7 cut(s) 71, 92, 120, 349, 1540, 1681, 1753
BceAI ACGGC 1 cut(s) 156
BcgI CGANNNNNNTGC 2 cut(s) 677, 711
BciVI GTATCC 1 cut(s) 494
BclI TGATCA 1 cut(s) 1270
BcnI CCSGG 1 cut(s) 1488
BcoDI GTCTC 1 cut(s) 752
BfaI CTAG 7 cut(s) 581, 825, 929, 1139, 1161, 1311, 1574
BfmI CTRYAG 2 cut(s) 1593, 1784
BfuAI ACCTGC 1 cut(s) 81
BfuI GTATCC 1 cut(s) 494
BisI GCNGC 9 cut(s) 144, 401, 693, 696, 735, 841, 1023, 1250, 1596
BlsI GCNGC 9 cut(s) 145, 402, 694, 697, 736, 842, 1024, 1251, 1597
BmcAI AGTACT 2 cut(s) 316, 829
Bme1390I CCNGG 1 cut(s) 1488
Bme18I GGWCC 3 cut(s) 245, 1527, 1627
BmgBI CACGTC 1 cut(s) 265
BmgT120I GGNCC 3 cut(s) 245, 1527, 1627
BmiI GGNNCC 3 cut(s) 1166, 1528, 1628
BmrFI CCNGG 1 cut(s) 1488
BmsI GCATC 4 cut(s) 155, 950, 1140, 1281
BpiI GAAGAC 1 cut(s) 435
Bpu14I TTCGAA 2 cut(s) 675, 966
BpuEI CTTGAG 1 cut(s) 514
BpuMI CCSGG 1 cut(s) 1488
BsaBI GATNNNNATC 1 cut(s) 505
BsaJI CCNNGG 3 cut(s) 551, 687, 1487
Bsc4I CCNNNNNNNGG 2 cut(s) 90, 1188
Bse118I RCCGGY 1 cut(s) 1106
Bse1I ACTGG 2 cut(s) 322, 1193
Bse21I CCTNAGG 1 cut(s) 1355
Bse3DI GCAATG 3 cut(s) 1038, 1111, 1128
Bse8I GATNNNNATC 1 cut(s) 505
BseDI CCNNGG 3 cut(s) 551, 687, 1487
BseGI GGATG 7 cut(s) 84, 360, 424, 1267, 1275, 1567, 1692
BseJI GATNNNNATC 1 cut(s) 505
BseLI CCNNNNNNNGG 2 cut(s) 90, 1188
BseMI GCAATG 3 cut(s) 1038, 1111, 1128
BseMII CTCAG 2 cut(s) 388, 1244
BseNI ACTGG 2 cut(s) 322, 1193
BseRI GAGGAG 4 cut(s) 347, 437, 461, 1455
BseSI GKGCMC 2 cut(s) 1236, 1498
BseXI GCAGC 8 cut(s) 412, 682, 704, 746, 827, 1034, 1261, 1607
BsgI GTGCAG 1 cut(s) 480
BshFI GGCC 4 cut(s) 1110, 1192, 1550, 1729
BsiSI CCGG 3 cut(s) 35, 1107, 1487
BslFI GGGAC 5 cut(s) 200, 939, 1000, 1292, 1640
BslI CCNNNNNNNGG 2 cut(s) 90, 1188
BsmAI GTCTC 1 cut(s) 752
BsmFI GGGAC 5 cut(s) 200, 939, 1000, 1292, 1640
BsmI GAATGC 1 cut(s) 787
BsnI GGCC 4 cut(s) 1110, 1192, 1550, 1729
Bsp119I TTCGAA 2 cut(s) 675, 966
Bsp1286I GDGCHC 2 cut(s) 1236, 1498
Bsp143I GATC 5 cut(s) 103, 514, 618, 1270, 1731
Bsp19I CCATGG 1 cut(s) 551
BspACI CCGC 2 cut(s) 88, 144
BspANI GGCC 4 cut(s) 1110, 1192, 1550, 1729
BspCNI CTCAG 2 cut(s) 387, 1245
BspLI GGNNCC 3 cut(s) 1166, 1528, 1628
BspMAI CTGCAG 1 cut(s) 1597
BspMI ACCTGC 1 cut(s) 81
BspPI GGATC 2 cut(s) 509, 1726
BspQI GCTCTTC 1 cut(s) 1140
BspT104I TTCGAA 2 cut(s) 675, 966
BsrDI GCAATG 3 cut(s) 1038, 1111, 1128
BsrFI RCCGGY 1 cut(s) 1106
BsrI ACTGG 2 cut(s) 322, 1193
BssAI RCCGGY 1 cut(s) 1106
BssECI CCNNGG 3 cut(s) 551, 687, 1487
BssMI GATC 5 cut(s) 103, 514, 618, 1270, 1731
BssT1I CCWWGG 1 cut(s) 551
Bst4CI ACNGT 2 cut(s) 724, 1521
Bst6I CTCTTC 4 cut(s) 1140, 1191, 1327, 1537
BstAPI GCANNNNNTGC 1 cut(s) 1048
BstBI TTCGAA 2 cut(s) 675, 966
BstC8I GCNNGC 5 cut(s) 7, 781, 785, 951, 1089
BstDEI CTNAG 5 cut(s) 374, 1069, 1253, 1355, 1670
BstDSI CCRYGG 1 cut(s) 551
BstF5I GGATG 7 cut(s) 84, 360, 424, 1267, 1275, 1567, 1692
BstKTI GATC 5 cut(s) 106, 517, 621, 1273, 1734
BstMAI GTCTC 1 cut(s) 752
BstMBI GATC 5 cut(s) 103, 514, 618, 1270, 1731
BstMWI GCNNNNNNNGC 3 cut(s) 692, 1028, 1048
BstNSI RCATGY 1 cut(s) 9
BstSCI CCNGG 1 cut(s) 1486
BstSFI CTRYAG 2 cut(s) 1593, 1784
BstSLI GKGCMC 2 cut(s) 1236, 1498
BstV1I GCAGC 8 cut(s) 412, 682, 704, 746, 827, 1034, 1261, 1607
BstV2I GAAGAC 1 cut(s) 435
BstXI CCANNNNNNTGG 3 cut(s) 804, 1118, 1758
Bsu36I CCTNAGG 1 cut(s) 1355
BsuI GTATCC 1 cut(s) 494
BsuRI GGCC 4 cut(s) 1110, 1192, 1550, 1729
BtgI CCRYGG 1 cut(s) 551
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 7 cut(s) 84, 360, 424, 1267, 1275, 1567, 1692
BtsIMutI CAGTG 1 cut(s) 1526
BveI ACCTGC 1 cut(s) 81
Cac8I GCNNGC 5 cut(s) 7, 781, 785, 951, 1089
Cfr10I RCCGGY 1 cut(s) 1106
Cfr13I GGNCC 3 cut(s) 245, 1527, 1627
Csp6I GTAC 6 cut(s) 315, 828, 995, 1036, 1414, 1614
CviQI GTAC 6 cut(s) 315, 828, 995, 1036, 1414, 1614
DdeI CTNAG 5 cut(s) 374, 1069, 1253, 1355, 1670
DpnI GATC 5 cut(s) 105, 516, 620, 1272, 1733
DpnII GATC 5 cut(s) 103, 514, 618, 1270, 1731
DraI TTTAAA 2 cut(s) 196, 1365
DraIII CACNNNGTG 2 cut(s) 800, 1523
EaeI YGGCCR 3 cut(s) 1108, 1190, 1727
Eam1104I CTCTTC 4 cut(s) 1140, 1191, 1327, 1537
EarI CTCTTC 4 cut(s) 1140, 1191, 1327, 1537
Eco130I CCWWGG 1 cut(s) 551
Eco47I GGWCC 3 cut(s) 245, 1527, 1627
Eco57I CTGAAG 1 cut(s) 1518
Eco81I CCTNAGG 1 cut(s) 1355
EcoO109I RGGNCCY 1 cut(s) 1527
EcoRI GAATTC 2 cut(s) 856, 1558
EcoT14I CCWWGG 1 cut(s) 551
EcoT22I ATGCAT 1 cut(s) 943
ErhI CCWWGG 1 cut(s) 551
FaqI GGGAC 5 cut(s) 200, 939, 1000, 1292, 1640
FauNDI CATATG 1 cut(s) 511
FbaI TGATCA 1 cut(s) 1270
Fnu4HI GCNGC 9 cut(s) 144, 401, 693, 696, 735, 841, 1023, 1250, 1596
FokI GGATG 7 cut(s) 71, 367, 431, 1262, 1274, 1554, 1699
Fsp4HI GCNGC 9 cut(s) 144, 401, 693, 696, 735, 841, 1023, 1250, 1596
FspBI CTAG 7 cut(s) 581, 825, 929, 1139, 1161, 1311, 1574
GluI GCNGC 9 cut(s) 144, 401, 693, 696, 735, 841, 1023, 1250, 1596
HaeIII GGCC 4 cut(s) 1110, 1192, 1550, 1729
HapII CCGG 3 cut(s) 35, 1107, 1487
HindIII AAGCTT 1 cut(s) 708
HinfI GANTC 6 cut(s) 521, 821, 932, 1011, 1634, 1717
HpaII CCGG 3 cut(s) 35, 1107, 1487
HphI GGTGA 5 cut(s) 638, 786, 880, 1203, 1734
Hpy166II GTNNAC 3 cut(s) 1003, 1144, 1406
Hpy188I TCNGA 5 cut(s) 103, 377, 559, 855, 1609
Hpy188III TCNNGA 5 cut(s) 518, 531, 914, 1543, 1555
Hpy8I GTNNAC 3 cut(s) 1003, 1144, 1406
HpyAV CCTTC 4 cut(s) 320, 760, 1561, 1604
HpyCH4III ACNGT 2 cut(s) 724, 1521
HpyCH4IV ACGT 4 cut(s) 78, 264, 1202, 1408
HpyF10VI GCNNNNNNNGC 3 cut(s) 692, 1028, 1048
HpyF3I CTNAG 5 cut(s) 374, 1069, 1253, 1355, 1670
HpySE526I ACGT 4 cut(s) 78, 264, 1202, 1408
Ksp22I TGATCA 1 cut(s) 1270
Kzo9I GATC 5 cut(s) 103, 514, 618, 1270, 1731
LguI GCTCTTC 1 cut(s) 1140
LmnI GCTCC 3 cut(s) 387, 1084, 1485
Lsp1109I GCAGC 8 cut(s) 412, 682, 704, 746, 827, 1034, 1261, 1607
LweI GCATC 4 cut(s) 155, 950, 1140, 1281
MaeI CTAG 7 cut(s) 581, 825, 929, 1139, 1161, 1311, 1574
MaeII ACGT 4 cut(s) 78, 264, 1202, 1408
MaeIII GTNAC 4 cut(s) 661, 1198, 1586, 1778
MalI GATC 5 cut(s) 105, 516, 620, 1272, 1733
MboI GATC 5 cut(s) 103, 514, 618, 1270, 1731
MhlI GDGCHC 2 cut(s) 1236, 1498
MlyI GAGTC 3 cut(s) 815, 926, 1628
MmeI TCCRAC 2 cut(s) 1350, 1468
Mph1103I ATGCAT 1 cut(s) 943
MseI TTAA 4 cut(s) 195, 872, 1364, 1398
MslI CAYNNNNRTG 5 cut(s) 284, 290, 802, 1685, 1756
MspA1I CMGCKG 2 cut(s) 695, 1252
MspI CCGG 3 cut(s) 35, 1107, 1487
MspR9I CCNGG 1 cut(s) 1488
Mva1269I GAATGC 1 cut(s) 787
MwoI GCNNNNNNNGC 3 cut(s) 692, 1028, 1048
NciI CCSGG 1 cut(s) 1488
NcoI CCATGG 1 cut(s) 551
NdeI CATATG 1 cut(s) 511
NdeII GATC 5 cut(s) 103, 514, 618, 1270, 1731
NlaIV GGNNCC 3 cut(s) 1166, 1528, 1628
NmeAIII GCCGAG 1 cut(s) 712
NmuCI GTSAC 3 cut(s) 1198, 1586, 1778
NsiI ATGCAT 1 cut(s) 943
NspI RCATGY 1 cut(s) 9
NspV TTCGAA 2 cut(s) 675, 966
PaeI GCATGC 1 cut(s) 9
PciSI GCTCTTC 1 cut(s) 1140
PctI GAATGC 1 cut(s) 787
PfeI GAWTC 3 cut(s) 521, 1011, 1717
PkrI GCNGC 9 cut(s) 145, 402, 694, 697, 736, 842, 1024, 1251, 1597
PleI GAGTC 3 cut(s) 815, 926, 1628
PpsI GAGTC 3 cut(s) 815, 926, 1628
PpuMI RGGWCCY 1 cut(s) 1527
PshBI ATTAAT 1 cut(s) 872
Psp1406I AACGTT 1 cut(s) 1408
Psp5II RGGWCCY 1 cut(s) 1527
PspN4I GGNNCC 3 cut(s) 1166, 1528, 1628
PspPI GGNCC 3 cut(s) 245, 1527, 1627
PspPPI RGGWCCY 1 cut(s) 1527
PstI CTGCAG 1 cut(s) 1597
PvuII CAGCTG 2 cut(s) 695, 1252
RsaI GTAC 6 cut(s) 316, 829, 996, 1037, 1415, 1615
RsaNI GTAC 6 cut(s) 315, 828, 995, 1036, 1414, 1614
RseI CAYNNNNRTG 5 cut(s) 284, 290, 802, 1685, 1756
SapI GCTCTTC 1 cut(s) 1140
SaqAI TTAA 4 cut(s) 195, 872, 1364, 1398
SatI GCNGC 9 cut(s) 144, 401, 693, 696, 735, 841, 1023, 1250, 1596
Sau3AI GATC 5 cut(s) 103, 514, 618, 1270, 1731
Sau96I GGNCC 3 cut(s) 245, 1527, 1627
ScaI AGTACT 2 cut(s) 316, 829
SchI GAGTC 3 cut(s) 815, 926, 1628
ScrFI CCNGG 1 cut(s) 1488
SduI GDGCHC 2 cut(s) 1236, 1498
SfaNI GCATC 4 cut(s) 155, 950, 1140, 1281
SfcI CTRYAG 2 cut(s) 1593, 1784
SfuI TTCGAA 2 cut(s) 675, 966
SinI GGWCC 3 cut(s) 245, 1527, 1627
SmiMI CAYNNNNRTG 5 cut(s) 284, 290, 802, 1685, 1756
SmlI CTYRAG 1 cut(s) 529
SmoI CTYRAG 1 cut(s) 529
SphI GCATGC 1 cut(s) 9
SsiI CCGC 2 cut(s) 88, 144
SspI AATATT 1 cut(s) 1242
SspMI CTAG 7 cut(s) 581, 825, 929, 1139, 1161, 1311, 1574
StyD4I CCNGG 1 cut(s) 1486
StyI CCWWGG 1 cut(s) 551
TaaI ACNGT 2 cut(s) 724, 1521
TaiI ACGT 4 cut(s) 81, 267, 1205, 1411
TaqI TCGA 3 cut(s) 675, 775, 966
TatI WGTACW 4 cut(s) 314, 827, 994, 1413
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 3 cut(s) 521, 1011, 1717
Tru1I TTAA 4 cut(s) 195, 872, 1364, 1398
Tru9I TTAA 4 cut(s) 195, 872, 1364, 1398
TscAI CASTG 1 cut(s) 1526
TseFI GTSAC 3 cut(s) 1198, 1586, 1778
TseI GCWGC 8 cut(s) 400, 692, 695, 734, 840, 1022, 1249, 1595
Tsp45I GTSAC 3 cut(s) 1198, 1586, 1778
TspGWI ACGGA 1 cut(s) 237
TspRI CASTG 1 cut(s) 1526
VpaK11BI GGWCC 3 cut(s) 245, 1527, 1627
VspI ATTAAT 1 cut(s) 872
XapI RAATTY 6 cut(s) 183, 198, 856, 977, 1056, 1558
XceI RCATGY 1 cut(s) 9
XspI CTAG 7 cut(s) 581, 825, 929, 1139, 1161, 1311, 1574
ZrmI AGTACT 2 cut(s) 316, 829
Zsp2I ATGCAT 1 cut(s) 943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.