Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009994

Physical Location & Seq

Genomic Coordinates Reverse (-)

1712180 .. 1715191

Gene Structure 3012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G012600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 498 bp

ATGGACGAAGCAGAAGCTCCAAGTCCTCCTCCGTTTCTGGAGGTCAAATGTCAGAGTTCAGGCATGAAACGCCGCTTCGCGAAGGGGACAGAGGCAGGTTTTGCAGTCTCACTGATAAACAAGAAATTGGGTTTGGGGGACCCACTTGCTGTGCATATTGAAGCCTTTAAAGAAGGAGAAGAGCCCATCAGTTTTGGACCCAGCTCGGCTCTCGTCGATTATGGCAATGGCTGGAGGTTACAGACCGTTTCCCAAGTGGATTCTTCTGGGATTGGAGGTGGACAAGGGGTTGGAAGGCCAATGGCAATGCCACTTCCTCGAGTAATGCGTTCTGACAAGTTACGTGTTCCAAAGAGGGTATCGAAACCAGAAATCAATTTTATGTACATTGGAAAAATAATATTAGCTTTCATTTTGATTTTTGTATTTGGTGCAATTTTCACGTTGGCTCTTGAGAACCTTCCTAGACTGATTTCTTTTTTCAGTTTATCAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AFT

Protein Analysis

166

Amino Acids

17.93

Weight (kDa)

9.37

Isoelectric Point (pI)

54.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37480 AT5G37480
fragaria_vesca	FvH4_1g28570
malus_domestica	MD12G1010600.v1.1 MD14G1007700.v1.1
prunus_persica	Prupe.7G012600_v2.0.a1 Prupe.7G012600_v2.0.a1 Prupe.7G012600_v2.0.a1
pyrus_communis	pycom12g00830
rosa_chinensis	RchiOBHm_Chr3g0496161
rosa_laevigata	RLG00000022556
rosa_multiflora	Rmu_sc0003733.1_g000053 Rmu_sc0006695.1_g000020
rosa_roxburghii	Rroxscaffold_6G00389510
rosa_rugosa	Rorug03G0279900 Rorug03G0280000
rosa_samantha	Rh3AG327000 Rh3BG363000 Rh3CG359900 Rh3DG363100
rosa_wichuraiana	Rw3G028660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	86
AccII	CGCG	1 cut(s)	80
AciI	CCGC	1 cut(s)	73
AfaI	GTAC	1 cut(s)	386
AflIII	ACRYGT	1 cut(s)	343
AgsI	TTSAA	1 cut(s)	161
AjuI	GAANNNNNNNTTGG	2 cut(s)	116, 148
AluBI	AGCT	3 cut(s)	17, 204, 407
AluI	AGCT	3 cut(s)	17, 204, 407
Alw26I	GTCTC	1 cut(s)	112
Ama87I	CYCGRG	1 cut(s)	318
AoxI	GGCC	1 cut(s)	296
AspS9I	GGNCC	2 cut(s)	139, 197
AvaI	CYCGRG	1 cut(s)	318
AvaII	GGWCC	2 cut(s)	139, 197
BanII	GRGCYC	1 cut(s)	186
BccI	CCATC	1 cut(s)	194
BcoDI	GTCTC	1 cut(s)	112
BfaI	CTAG	1 cut(s)	465
BfuAI	ACCTGC	1 cut(s)	86
BisI	GCNGC	1 cut(s)	73
BlsI	GCNGC	1 cut(s)	74
Bme18I	GGWCC	2 cut(s)	139, 197
BmeT110I	CYCGRG	1 cut(s)	318
BmgT120I	GGNCC	2 cut(s)	139, 197
BmiI	GGNNCC	3 cut(s)	140, 141, 199
BpmI	CTGGAG	2 cut(s)	59, 253
BpuEI	CTTGAG	1 cut(s)	473
BsaAI	YACGTR	1 cut(s)	344
Bse3DI	GCAATG	2 cut(s)	232, 312
BseMI	GCAATG	2 cut(s)	232, 312
BseRI	GAGGAG	1 cut(s)	18
BseYI	CCCAGC	1 cut(s)	200
Bsh1236I	CGCG	1 cut(s)	80
BshFI	GGCC	1 cut(s)	298
BsiHKCI	CYCGRG	1 cut(s)	318
BslFI	GGGAC	2 cut(s)	100, 152
BsmAI	GTCTC	1 cut(s)	112
BsmFI	GGGAC	2 cut(s)	100, 152
BsnI	GGCC	1 cut(s)	298
BsoBI	CYCGRG	1 cut(s)	318
Bsp1286I	GDGCHC	1 cut(s)	186
Bsp1407I	TGTACA	1 cut(s)	384
Bsp68I	TCGCGA	1 cut(s)	80
BspACI	CCGC	1 cut(s)	73
BspANI	GGCC	1 cut(s)	298
BspFNI	CGCG	1 cut(s)	80
BspLI	GGNNCC	3 cut(s)	140, 141, 199
BspMI	ACCTGC	1 cut(s)	86
BspQI	GCTCTTC	1 cut(s)	174
BsrDI	GCAATG	2 cut(s)	232, 312
BsrGI	TGTACA	1 cut(s)	384
Bst4CI	ACNGT	1 cut(s)	247
Bst6I	CTCTTC	1 cut(s)	174
BstAPI	GCANNNNNTGC	1 cut(s)	101
BstAUI	TGTACA	1 cut(s)	384
BstBAI	YACGTR	1 cut(s)	344
BstFNI	CGCG	1 cut(s)	80
BstMAI	GTCTC	1 cut(s)	112
BstMWI	GCNNNNNNNGC	2 cut(s)	69, 101
BstUI	CGCG	1 cut(s)	80
BsuRI	GGCC	1 cut(s)	298
BtsIMutI	CAGTG	1 cut(s)	110
BtuMI	TCGCGA	1 cut(s)	80
BveI	ACCTGC	1 cut(s)	86
Cfr13I	GGNCC	2 cut(s)	139, 197
Csp6I	GTAC	1 cut(s)	385
CviAII	CATG	1 cut(s)	64
CviJI	RGCY	9 cut(s)	17, 164, 184, 204, 209, 231, 298, 407, 449
CviKI_1	RGCY	9 cut(s)	17, 164, 184, 204, 209, 231, 298, 407, 449
CviQI	GTAC	1 cut(s)	385
DraI	TTTAAA	1 cut(s)	169
Eam1104I	CTCTTC	1 cut(s)	174
EarI	CTCTTC	1 cut(s)	174
Eco24I	GRGCYC	1 cut(s)	186
Eco47I	GGWCC	2 cut(s)	139, 197
Eco88I	CYCGRG	1 cut(s)	318
EcoO109I	RGGNCCY	1 cut(s)	139
EcoT38I	GRGCYC	1 cut(s)	186
FaeI	CATG	1 cut(s)	67
FaiI	YATR	4 cut(s)	65, 156, 222, 383
FaqI	GGGAC	2 cut(s)	100, 152
FatI	CATG	1 cut(s)	63
Fnu4HI	GCNGC	1 cut(s)	73
FriOI	GRGCYC	1 cut(s)	186
Fsp4HI	GCNGC	1 cut(s)	73
FspBI	CTAG	1 cut(s)	465
GluI	GCNGC	1 cut(s)	73
GsaI	CCCAGC	1 cut(s)	204
GsuI	CTGGAG	2 cut(s)	59, 253
HaeIII	GGCC	1 cut(s)	298
Hin1II	CATG	1 cut(s)	67
HinfI	GANTC	1 cut(s)	260
Hpy166II	GTNNAC	1 cut(s)	281
Hpy188I	TCNGA	2 cut(s)	54, 334
Hpy188III	TCNNGA	3 cut(s)	38, 79, 452
Hpy8I	GTNNAC	1 cut(s)	281
Hpy99I	CGWCG	1 cut(s)	218
HpyAV	CCTTC	4 cut(s)	76, 167, 288, 470
HpyCH4III	ACNGT	1 cut(s)	247
HpyCH4IV	ACGT	2 cut(s)	343, 443
HpyCH4V	TGCA	3 cut(s)	104, 154, 434
HpyF10VI	GCNNNNNNNGC	2 cut(s)	69, 101
HpySE526I	ACGT	2 cut(s)	343, 443
Hsp92II	CATG	1 cut(s)	67
KflI	GGGWCCC	1 cut(s)	139
LguI	GCTCTTC	1 cut(s)	174
LmnI	GCTCC	1 cut(s)	22
LpnPI	CCDG	7 cut(s)	23, 45, 81, 214, 217, 252, 381
MaeI	CTAG	1 cut(s)	465
MaeII	ACGT	2 cut(s)	343, 443
MaeIII	GTNAC	2 cut(s)	237, 339
MboII	GAAGA	2 cut(s)	191, 255
MhlI	GDGCHC	1 cut(s)	186
MluCI	AATT	3 cut(s)	125, 376, 435
MmeI	TCCRAC	1 cut(s)	271
MnlI	CCTC	8 cut(s)	34, 36, 39, 85, 228, 269, 327, 348
MseI	TTAA	1 cut(s)	168
MvnI	CGCG	1 cut(s)	80
MwoI	GCNNNNNNNGC	2 cut(s)	69, 101
NlaIII	CATG	1 cut(s)	67
NlaIV	GGNNCC	3 cut(s)	140, 141, 199
NmeAIII	GCCGAG	1 cut(s)	185
NruI	TCGCGA	1 cut(s)	80
PaeR7I	CTCGAG	1 cut(s)	318
PciSI	GCTCTTC	1 cut(s)	174
PcsI	WCGNNNNNNNCGW	1 cut(s)	325
PfeI	GAWTC	1 cut(s)	260
PkrI	GCNGC	1 cut(s)	74
Ppu21I	YACGTR	1 cut(s)	344
PpuMI	RGGWCCY	1 cut(s)	139
Psp5II	RGGWCCY	1 cut(s)	139
PspFI	CCCAGC	1 cut(s)	200
PspN4I	GGNNCC	3 cut(s)	140, 141, 199
PspPI	GGNCC	2 cut(s)	139, 197
PspPPI	RGGWCCY	1 cut(s)	139
PspXI	VCTCGAGB	1 cut(s)	318
RruI	TCGCGA	1 cut(s)	80
RsaI	GTAC	1 cut(s)	386
RsaNI	GTAC	1 cut(s)	385
SapI	GCTCTTC	1 cut(s)	174
SaqAI	TTAA	1 cut(s)	168
SatI	GCNGC	1 cut(s)	73
Sau96I	GGNCC	2 cut(s)	139, 197
SduI	GDGCHC	1 cut(s)	186
Sfr274I	CTCGAG	1 cut(s)	318
SinI	GGWCC	2 cut(s)	139, 197
SlaI	CTCGAG	1 cut(s)	318
SmlI	CTYRAG	2 cut(s)	318, 452
SmoI	CTYRAG	2 cut(s)	318, 452
Sse9I	AATT	3 cut(s)	125, 376, 435
SsiI	CCGC	1 cut(s)	73
SspI	AATATT	1 cut(s)	402
SspMI	CTAG	1 cut(s)	465
TaaI	ACNGT	1 cut(s)	247
TaiI	ACGT	2 cut(s)	346, 446
TaqI	TCGA	3 cut(s)	216, 319, 362
TasI	AATT	3 cut(s)	125, 376, 435
TatI	WGTACW	1 cut(s)	384
TauI	GCSGC	1 cut(s)	75
TfiI	GAWTC	1 cut(s)	260
Tru1I	TTAA	1 cut(s)	168
Tru9I	TTAA	1 cut(s)	168
TscAI	CASTG	1 cut(s)	117
TspDTI	ATGAA	2 cut(s)	80, 400
TspGWI	ACGGA	1 cut(s)	21
TspRI	CASTG	1 cut(s)	117
VpaK11BI	GGWCC	2 cut(s)	139, 197
XhoI	CTCGAG	1 cut(s)	318
XspI	CTAG	1 cut(s)	465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.