No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G37480 AT5G37480 |
| fragaria_vesca | FvH4_1g28570 |
| malus_domestica | MD12G1010600.v1.1 MD14G1007700.v1.1 |
| prunus_persica | Prupe.7G012600_v2.0.a1 Prupe.7G012600_v2.0.a1 Prupe.7G012600_v2.0.a1 |
| pyrus_communis | pycom12g00830 |
| rosa_chinensis | RchiOBHm_Chr3g0496161 |
| rosa_laevigata | RLG00000022556 |
| rosa_multiflora | Rmu_sc0003733.1_g000053 Rmu_sc0006695.1_g000020 |
| rosa_roxburghii | Rroxscaffold_6G00389510 |
| rosa_rugosa | Rorug03G0279900 Rorug03G0280000 |
| rosa_samantha | Rh3AG327000 Rh3BG363000 Rh3CG359900 Rh3DG363100 |
| rosa_wichuraiana | Rw3G028660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 73, 134, 207, 235 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 272 |
| AgsI | TTSAA | 1 cut(s) | 161 |
| AjnI | CCWGG | 1 cut(s) | 265 |
| AluBI | AGCT | 3 cut(s) | 11, 204, 256 |
| AluI | AGCT | 3 cut(s) | 11, 204, 256 |
| Alw26I | GTCTC | 1 cut(s) | 112 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 231 |
| AoxI | GGCC | 2 cut(s) | 196, 296 |
| AspS9I | GGNCC | 2 cut(s) | 139, 197 |
| AsuHPI | GGTGA | 2 cut(s) | 188, 255 |
| AvaII | GGWCC | 1 cut(s) | 139 |
| BanII | GRGCYC | 1 cut(s) | 186 |
| BccI | CCATC | 1 cut(s) | 194 |
| BceAI | ACGGC | 3 cut(s) | 86, 149, 238 |
| BciT130I | CCWGG | 1 cut(s) | 267 |
| BcoDI | GTCTC | 1 cut(s) | 112 |
| Bme1390I | CCNGG | 1 cut(s) | 267 |
| Bme18I | GGWCC | 1 cut(s) | 139 |
| BmgT120I | GGNCC | 2 cut(s) | 139, 197 |
| BmiI | GGNNCC | 4 cut(s) | 140, 141, 183, 199 |
| BmrFI | CCNGG | 1 cut(s) | 267 |
| BpmI | CTGGAG | 1 cut(s) | 59 |
| BsaJI | CCNNGG | 1 cut(s) | 266 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 13, 43, 273, 303 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 272 |
| Bse1I | ACTGG | 1 cut(s) | 311 |
| Bse3DI | GCAATG | 2 cut(s) | 87, 312 |
| BseBI | CCWGG | 1 cut(s) | 267 |
| BseDI | CCNNGG | 1 cut(s) | 266 |
| BseGI | GGATG | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 272 |
| BseMI | GCAATG | 2 cut(s) | 87, 312 |
| BseNI | ACTGG | 1 cut(s) | 311 |
| BseRI | GAGGAG | 1 cut(s) | 194 |
| BseYI | CCCAGC | 2 cut(s) | 200, 252 |
| BsgI | GTGCAG | 1 cut(s) | 137 |
| BshFI | GGCC | 2 cut(s) | 198, 298 |
| BslFI | GGGAC | 2 cut(s) | 100, 152 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 272 |
| BsmAI | GTCTC | 1 cut(s) | 112 |
| BsmFI | GGGAC | 2 cut(s) | 100, 152 |
| BsnI | GGCC | 2 cut(s) | 198, 298 |
| Bsp1286I | GDGCHC | 1 cut(s) | 186 |
| BspACI | CCGC | 4 cut(s) | 73, 134, 207, 235 |
| BspANI | GGCC | 2 cut(s) | 198, 298 |
| BspLI | GGNNCC | 4 cut(s) | 140, 141, 183, 199 |
| BsrDI | GCAATG | 2 cut(s) | 87, 312 |
| BsrI | ACTGG | 1 cut(s) | 311 |
| BssECI | CCNNGG | 1 cut(s) | 266 |
| Bst2UI | CCWGG | 1 cut(s) | 267 |
| Bst4CI | ACNGT | 2 cut(s) | 247, 328 |
| BstC8I | GCNNGC | 1 cut(s) | 233 |
| BstF5I | GGATG | 1 cut(s) | 69 |
| BstMAI | GTCTC | 1 cut(s) | 112 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 101 |
| BstNI | CCWGG | 1 cut(s) | 267 |
| BstSCI | CCNGG | 1 cut(s) | 265 |
| BsuRI | GGCC | 2 cut(s) | 198, 298 |
| BtsCI | GGATG | 1 cut(s) | 69 |
| BtsI | GCAGTG | 1 cut(s) | 232 |
| BtsIMutI | CAGTG | 1 cut(s) | 232 |
| Cac8I | GCNNGC | 1 cut(s) | 233 |
| CaiI | CAGNNNCTG | 1 cut(s) | 231 |
| Cfr13I | GGNCC | 2 cut(s) | 139, 197 |
| CviJI | RGCY | 8 cut(s) | 11, 164, 184, 198, 204, 231, 256, 298 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 164, 184, 198, 204, 231, 256, 298 |
| EciI | GGCGGA | 1 cut(s) | 196 |
| Eco24I | GRGCYC | 1 cut(s) | 186 |
| Eco47I | GGWCC | 1 cut(s) | 139 |
| EcoO109I | RGGNCCY | 1 cut(s) | 139 |
| EcoRII | CCWGG | 1 cut(s) | 265 |
| EcoT38I | GRGCYC | 1 cut(s) | 186 |
| FaiI | YATR | 2 cut(s) | 116, 331 |
| FaqI | GGGAC | 2 cut(s) | 100, 152 |
| FauI | CCCGC | 1 cut(s) | 127 |
| FokI | GGATG | 1 cut(s) | 76 |
| FriOI | GRGCYC | 1 cut(s) | 186 |
| GsaI | CCCAGC | 2 cut(s) | 204, 256 |
| GsuI | CTGGAG | 1 cut(s) | 59 |
| HaeIII | GGCC | 2 cut(s) | 198, 298 |
| HinfI | GANTC | 2 cut(s) | 99, 260 |
| HphI | GGTGA | 2 cut(s) | 188, 255 |
| Hpy188I | TCNGA | 1 cut(s) | 54 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 317 |
| Hpy99I | CGWCG | 1 cut(s) | 218 |
| HpyAV | CCTTC | 2 cut(s) | 167, 278 |
| HpyCH4III | ACNGT | 2 cut(s) | 247, 328 |
| HpyCH4V | TGCA | 1 cut(s) | 154 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 101 |
| KflI | GGGWCCC | 1 cut(s) | 139 |
| LmnI | GCTCC | 2 cut(s) | 181, 209 |
| MaeIII | GTNAC | 3 cut(s) | 237, 247, 322 |
| MhlI | GDGCHC | 1 cut(s) | 186 |
| MluCI | AATT | 1 cut(s) | 125 |
| MnlI | CCTC | 7 cut(s) | 27, 34, 85, 172, 221, 269, 288 |
| MspA1I | CMGCKG | 1 cut(s) | 256 |
| MspR9I | CCNGG | 1 cut(s) | 267 |
| MvaI | CCWGG | 1 cut(s) | 267 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 101 |
| NlaIV | GGNNCC | 4 cut(s) | 140, 141, 183, 199 |
| PfeI | GAWTC | 2 cut(s) | 99, 260 |
| PpuMI | RGGWCCY | 1 cut(s) | 139 |
| Psp5II | RGGWCCY | 1 cut(s) | 139 |
| Psp6I | CCWGG | 1 cut(s) | 265 |
| PspFI | CCCAGC | 2 cut(s) | 200, 252 |
| PspGI | CCWGG | 1 cut(s) | 265 |
| PspN4I | GGNNCC | 4 cut(s) | 140, 141, 183, 199 |
| PspPI | GGNCC | 2 cut(s) | 139, 197 |
| PspPPI | RGGWCCY | 1 cut(s) | 139 |
| PstNI | CAGNNNCTG | 1 cut(s) | 231 |
| PvuII | CAGCTG | 1 cut(s) | 256 |
| Sau96I | GGNCC | 2 cut(s) | 139, 197 |
| ScrFI | CCNGG | 1 cut(s) | 267 |
| SduI | GDGCHC | 1 cut(s) | 186 |
| SetI | ASST | 8 cut(s) | 13, 19, 45, 178, 206, 258, 268, 280 |
| SinI | GGWCC | 1 cut(s) | 139 |
| Sse9I | AATT | 1 cut(s) | 125 |
| SsiI | CCGC | 4 cut(s) | 73, 134, 207, 235 |
| StyD4I | CCNGG | 1 cut(s) | 265 |
| TaaI | ACNGT | 2 cut(s) | 247, 328 |
| TaqI | TCGA | 1 cut(s) | 216 |
| TasI | AATT | 1 cut(s) | 125 |
| TfiI | GAWTC | 2 cut(s) | 99, 260 |
| TscAI | CASTG | 1 cut(s) | 232 |
| TspGWI | ACGGA | 2 cut(s) | 21, 104 |
| TspRI | CASTG | 1 cut(s) | 232 |
| VpaK11BI | GGWCC | 1 cut(s) | 139 |