Rorug03G0279900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0009994
Physical Location & Seq
Forward (+)
27775754 .. 27779516
3763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0279900.1

Sequence Viewer

Length: 2508 bp
ATGCAACTGGGTAGTGGTACTTTGTTTTTCTCATTCATCTTCAGTTTGCTTCCGTCACAATATGGCGCTGAAGTACTATATAACATAACTCCTTCAGACCCATTATCTGAGGGACAAACTCTAGTCTCTCCAGGCTTGATATTCGAATTGGGCTTCTTCAGTCCTAATAGTTCTGCTAAGAAGTATGTGGGGTTGTGGCACAAAAGTATATTTCCCCGTAAATATGTATGGGTGGCTAACAGATATAATCCTCTTGCAGCTACAAACACCTTGGCTACATTGAAAATTGGCAGCAATGGGAATCTGGAGCTTGTAGATGGGAAGCAGAGTTCTGTTTGGTCAACCAATATATCTAACGGTTCATCTGCAGTTCTCTTAGATAATGGAAACTTTGTTGTTAAAGATGTTATGGGAGCTGATTTGTGGGAGAGTTTTAATAATCCTGGTGACACACATCTGGCAGGCATGTTGGTGGGATATGATAATCATTCTGGAAAAAGGAATTTCTTGACCTCTTGGAAAAGTGAAAATGATCCATCACCGGGGATATTCTTGGTCGGACTGTCAGCAGAGTTGCCGGCACAATCGTTCATTTGGATTAATGGATCTACTCCCCACTGGAGAAGTGGGCCATGGGATAAATCAAAGTTTATTGGTTTACCCTCAATGGATTCTCAGTATCTAAATCCATTTACTATTGTTGATAATGAGACACAGGGAACAAGGTATTTATCTTACGGTATTGAGAAAATTCTTGGTGAGAAAATTCTTGCATATGGGGACATATCTTCAAAAGGTATAGCGAGATTCTATTTTTCAGTAAGTGGCAAGAACTGGTATCTTAACTGGGAGACATGGAAAACCCCATGTGACAATTATGGTGCCTGTGGACCTTTTGGGGTTTGCAAAGCTTCTAAATCTCCAATCTGCAATTGTTTGAAAGGGTTTATACCCAAGTCAAATGAGGAATGGAGCAAAAGAAACTGGACCGGAGGTTGTGTGAGACGAACAAATTTGTCTTGTCAGACACACAGAAATGAATCAGTCTCATCAAAAGGAAAAGATGGGTTTTTGAAATTGGAAAGATTGAAAGTACCCGATTTTCATCAATATCTGAGTTCTTTGGCTCCAGACAAGTTCGAGGACTGCAAGATAAAGTGCCTGAGTAATTGTTCTTGCCTGGCTTATGCATATATTGATAACATAGGGTGTTTGGTGTGGTCCAAAGACCTTATTGATATGCAGCAGTTTCCAGCTTTTGGAGAAGATCTTTACGTCCGTCTAGCACACTCAGAACTAGGTGAAGGAAAACCGATAAAGTTAATTGCCAGCCTTACAGCTATTGGATTTATGAGTATCTTGGTTGCTATAGTCTTCAGTTTGCAAAGGTGTCGTGCTAACCAAAAGCGACACGTCATATTAACATCCCGGCGCTTGGAATCAACTAGTATGACTAAGATTCATAGGGACAGTCTTCGAGAATATATAGGGAATCATGATCCCTCAGAGGTAAAGATATATGATTTTGATAGCATACTAATCGCCACAGACAGCTTCAACATCACAAACAAACTTGGGCAAGGAGGCTTTGGCCCAGTTTATAAGGGGATGCTACCAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGGACAAGGTGTCGAAGAGTTCAAGAATGAGATGTTGTTGATCTCTAATCTTCAACACAAAAACCTTGTTAGGATGATGGGTTGCTGTGTTAAAGAGGATGAGAAGTTACTGATTTACGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATGTGATCTGACTAAGAGAGCTGTGCTTGATTGGGCTACACGCATTAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATGTGAAGGTGATACATAGAGATTTAAAAGTCAGTAACATTCTCTTGGATGAGAAAATGAATCCAAAAATTTCAGATTTTGGATTGGCACGTATAGTTGAAGAAACACAGTGTCTAGAAAATACTCAAAAGGTTGTTGGAACACGTGGCTATATGTCTCCTGAGTATGCCATGGGTGGGGTATTTTCCGAAAAATCTGATGTCTACAGCTTTGGGGTCCTGGTATTGGAGATTATTAGCGGCAAGAAGAATACCAGCTTCTATTTATATGAACAACAGCTAGGCCTCCTTGCATATGCATGGAAGTTGTGGAATGAAGGCAGGGCATTGGAGTTAGTAGATGAAGTATTGAGTGATTCATATTCCTCATCAGAAGTAATAACATGCGTGCATGTTGGGCTTCTTTGTGTACAGGACAATGTTGTGGATAGACCAACCATGGCAGATGTAGCTTCAATTCTAAGCAGCGAGAAAGATGGTCCACATCCGAAGAGGCCTGTATTCACTATCCAAAATTCAGCTTATCATCTTAGACCATCCTATGAATATACTAATTCCTCCACAAATGAAGCTAGCATTACGACGATCGAAGGACGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AFT

Protein Analysis

835

Amino Acids

93.32

Weight (kDa)

7.21

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 174 1.5e-25 D-mannose binding lectin
S_locus_glycop PF00954 207 - 320 6.6e-26 S-locus glycoprotein domain
PAN_2 PF08276 351 - 414 5.4e-18 PAN-like domain
PK_Tyr_Ser-Thr PF07714 520 - 786 1.8e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 520 - 720 2.4e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1602
AccB1I GGYRCC 1 cut(s) 881
AccB7I CCANNNNNTGG 1 cut(s) 1259
AccI GTMKAC 1 cut(s) 2112
AciI CCGC 1 cut(s) 2148
AclWI GGATC 3 cut(s) 527, 613, 1493
AcsI RAATTY 6 cut(s) 502, 750, 765, 1012, 1977, 2422
AcuI CTGAAG 5 cut(s) 25, 78, 90, 142, 1360
AcvI CACGTG 1 cut(s) 2054
AfaI GTAC 4 cut(s) 19, 75, 1095, 2319
AfiI CCNNNNNNNGG 5 cut(s) 542, 1259, 1435, 2085, 2134
AflIII ACRYGT 2 cut(s) 1411, 2051
AhdI GACNNNNNGTC 1 cut(s) 1667
AhlI ACTAGT 1 cut(s) 1445
AjiI CACGTC 1 cut(s) 1414
AjnI CCWGG 4 cut(s) 130, 442, 1179, 2127
AloI GAACNNNNNNTCC 2 cut(s) 313, 345
Alw26I GTCTC 6 cut(s) 130, 704, 845, 997, 1051, 2070
AlwI GGATC 3 cut(s) 527, 613, 1493
AoxI GGCC 4 cut(s) 629, 1591, 2191, 2402
ApeKI GCWGC 4 cut(s) 257, 291, 1243, 2373
ApoI RAATTY 6 cut(s) 502, 750, 765, 1012, 1977, 2422
AseI ATTAAT 2 cut(s) 600, 1857
AspLEI GCGC 2 cut(s) 68, 1434
AspS9I GGNCC 7 cut(s) 629, 890, 987, 1221, 1592, 2125, 2387
AsuC2I CCSGG 2 cut(s) 543, 1429
AsuHPI GGTGA 5 cut(s) 458, 531, 770, 1313, 1930
AsuII TTCGAA 1 cut(s) 144
AsuNHI GCTAGC 1 cut(s) 2480
AvaII GGWCC 5 cut(s) 890, 987, 1221, 2125, 2387
BanI GGYRCC 1 cut(s) 881
BbrPI CACGTG 1 cut(s) 2054
BbsI GAAGAC 2 cut(s) 1366, 1466
BbvI GCAGC 4 cut(s) 269, 303, 1255, 2385
BccI CCATC 7 cut(s) 311, 544, 1058, 1729, 1905, 2378, 2452
BcgI CGANNNNNNTGC 4 cut(s) 1373, 1407, 1522, 1556
BciT130I CCWGG 4 cut(s) 132, 444, 1181, 2129
BciVI GTATCC 1 cut(s) 1795
BcnI CCSGG 2 cut(s) 543, 1429
BcoDI GTCTC 6 cut(s) 130, 704, 845, 997, 1051, 2070
BcuI ACTAGT 1 cut(s) 1445
BfaI CTAG 9 cut(s) 122, 1283, 1298, 1446, 1650, 1878, 2024, 2189, 2481
BfmI CTRYAG 3 cut(s) 366, 1368, 2113
BfoI RGCGCY 2 cut(s) 69, 1435
BfuI GTATCC 1 cut(s) 1795
BglII AGATCT 1 cut(s) 1267
BisI GCNGC 5 cut(s) 258, 292, 1244, 2149, 2374
BlsI GCNGC 5 cut(s) 259, 293, 1245, 2150, 2375
BmcAI AGTACT 1 cut(s) 75
Bme1390I CCNGG 6 cut(s) 132, 444, 543, 1181, 1429, 2129
Bme18I GGWCC 5 cut(s) 890, 987, 1221, 2125, 2387
BmeRI GACNNNNNGTC 1 cut(s) 1667
BmgBI CACGTC 1 cut(s) 1414
BmgT120I GGNCC 7 cut(s) 629, 890, 987, 1221, 1592, 2125, 2387
BmiI GGNNCC 3 cut(s) 883, 1128, 2126
BmrFI CCNGG 6 cut(s) 132, 444, 543, 1181, 1429, 2129
BmrI ACTGGG 3 cut(s) 17, 856, 1589
BmsI GCATC 1 cut(s) 1599
BmtI GCTAGC 1 cut(s) 2484
BmuI ACTGGG 3 cut(s) 17, 856, 1589
BpiI GAAGAC 2 cut(s) 1366, 1466
BpmI CTGGAG 4 cut(s) 114, 326, 640, 1113
Bpu10I CCTNAGC 1 cut(s) 1657
Bpu14I TTCGAA 1 cut(s) 144
BpuMI CCSGG 2 cut(s) 543, 1429
BsaAI YACGTR 2 cut(s) 2000, 2054
BsaBI GATNNNNATC 1 cut(s) 1104
BsaJI CCNNGG 5 cut(s) 270, 542, 632, 2079, 2346
BsaWI WCCGGW 1 cut(s) 989
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bsc4I CCNNNNNNNGG 5 cut(s) 542, 1259, 1435, 2085, 2134
Bse118I RCCGGY 1 cut(s) 577
Bse1I ACTGG 6 cut(s) 12, 623, 839, 851, 989, 1595
Bse3DI GCAATG 1 cut(s) 301
Bse8I GATNNNNATC 1 cut(s) 1104
BseBI CCWGG 4 cut(s) 132, 444, 1181, 2129
BseDI CCNNGG 5 cut(s) 270, 542, 632, 2079, 2346
BseGI GGATG 7 cut(s) 1424, 1614, 1737, 1762, 1963, 2392, 2444
BseJI GATNNNNATC 1 cut(s) 1104
BseLI CCNNNNNNNGG 5 cut(s) 542, 1259, 1435, 2085, 2134
BseMI GCAATG 1 cut(s) 301
BseMII CTCAG 8 cut(s) 99, 689, 1106, 1154, 1305, 1518, 1671, 2061
BseNI ACTGG 6 cut(s) 12, 623, 839, 851, 989, 1595
BseXI GCAGC 4 cut(s) 269, 303, 1255, 2385
Bsh1285I CGRYCG 1 cut(s) 2496
BshFI GGCC 4 cut(s) 631, 1593, 2193, 2404
BshNI GGYRCC 1 cut(s) 881
BsiEI CGRYCG 1 cut(s) 2496
BsiSI CCGG 4 cut(s) 542, 578, 990, 1429
BslFI GGGAC 3 cut(s) 126, 794, 1481
BslI CCNNNNNNNGG 5 cut(s) 542, 1259, 1435, 2085, 2134
BsmAI GTCTC 6 cut(s) 130, 704, 845, 997, 1051, 2070
BsmBI CGTCTC 1 cut(s) 997
BsmFI GGGAC 3 cut(s) 126, 794, 1481
BsnI GGCC 4 cut(s) 631, 1593, 2193, 2404
Bsp119I TTCGAA 1 cut(s) 144
Bsp1407I TGTACA 1 cut(s) 2317
Bsp143I GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
Bsp19I CCATGG 3 cut(s) 632, 2079, 2346
BspACI CCGC 1 cut(s) 2148
BspANI GGCC 4 cut(s) 631, 1593, 2193, 2404
BspCNI CTCAG 8 cut(s) 100, 688, 1107, 1155, 1304, 1517, 1670, 2062
BspHI TCATGA 2 cut(s) 1495, 1900
BspLI GGNNCC 3 cut(s) 883, 1128, 2126
BspMAI CTGCAG 1 cut(s) 370
BspOI GCTAGC 1 cut(s) 2484
BspPI GGATC 3 cut(s) 527, 613, 1493
BspT104I TTCGAA 1 cut(s) 144
BspT107I GGYRCC 1 cut(s) 881
BsrDI GCAATG 1 cut(s) 301
BsrFI RCCGGY 1 cut(s) 577
BsrGI TGTACA 1 cut(s) 2317
BsrI ACTGG 6 cut(s) 12, 623, 839, 851, 989, 1595
BssAI RCCGGY 1 cut(s) 577
BssECI CCNNGG 5 cut(s) 270, 542, 632, 2079, 2346
BssMI GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
BssT1I CCWWGG 4 cut(s) 270, 632, 2079, 2346
Bst2UI CCWGG 4 cut(s) 132, 444, 1181, 2129
Bst4CI ACNGT 5 cut(s) 359, 564, 740, 1472, 2019
Bst6I CTCTTC 2 cut(s) 1668, 2393
BstAUI TGTACA 1 cut(s) 2317
BstBAI YACGTR 2 cut(s) 2000, 2054
BstBI TTCGAA 1 cut(s) 144
BstC8I GCNNGC 5 cut(s) 463, 579, 1330, 2297, 2482
BstDSI CCRYGG 3 cut(s) 632, 2079, 2346
BstF5I GGATG 7 cut(s) 1424, 1614, 1737, 1762, 1963, 2392, 2444
BstH2I RGCGCY 2 cut(s) 69, 1435
BstHHI GCGC 2 cut(s) 68, 1434
BstKTI GATC 7 cut(s) 535, 608, 1270, 1501, 1701, 1819, 2496
BstMAI GTCTC 6 cut(s) 130, 704, 845, 997, 1051, 2070
BstMBI GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
BstMCI CGRYCG 1 cut(s) 2496
BstMWI GCNNNNNNNGC 2 cut(s) 2305, 2357
BstNI CCWGG 4 cut(s) 132, 444, 1181, 2129
BstNSI RCATGY 3 cut(s) 469, 2295, 2303
BstSCI CCNGG 6 cut(s) 130, 442, 541, 1179, 1427, 2127
BstSFI CTRYAG 3 cut(s) 366, 1368, 2113
BstV1I GCAGC 4 cut(s) 269, 303, 1255, 2385
BstV2I GAAGAC 2 cut(s) 1366, 1466
BstX2I RGATCY 2 cut(s) 605, 1267
BstYI RGATCY 2 cut(s) 605, 1267
BsuI GTATCC 1 cut(s) 1795
BsuRI GGCC 4 cut(s) 631, 1593, 2193, 2404
BtgI CCRYGG 3 cut(s) 632, 2079, 2346
BtrI CACGTC 1 cut(s) 1414
BtsCI GGATG 7 cut(s) 1424, 1614, 1737, 1762, 1963, 2392, 2444
BtsIMutI CAGTG 2 cut(s) 616, 2024
Cac8I GCNNGC 5 cut(s) 463, 579, 1330, 2297, 2482
CciI TCATGA 2 cut(s) 1495, 1900
CfoI GCGC 2 cut(s) 68, 1434
Cfr10I RCCGGY 1 cut(s) 577
Cfr13I GGNCC 7 cut(s) 629, 890, 987, 1221, 1592, 2125, 2387
Csp6I GTAC 4 cut(s) 18, 74, 1094, 2318
CviQI GTAC 4 cut(s) 18, 74, 1094, 2318
DpnI GATC 7 cut(s) 534, 607, 1269, 1500, 1700, 1818, 2495
DpnII GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
DraI TTTAAA 1 cut(s) 1935
DriI GACNNNNNGTC 1 cut(s) 1667
Eam1104I CTCTTC 2 cut(s) 1668, 2393
Eam1105I GACNNNNNGTC 1 cut(s) 1667
EarI CTCTTC 2 cut(s) 1668, 2393
Eco130I CCWWGG 4 cut(s) 270, 632, 2079, 2346
Eco147I AGGCCT 2 cut(s) 2193, 2404
Eco47I GGWCC 5 cut(s) 890, 987, 1221, 2125, 2387
Eco57I CTGAAG 5 cut(s) 25, 78, 90, 142, 1360
Eco72I CACGTG 1 cut(s) 2054
EcoO109I RGGNCCY 1 cut(s) 2125
EcoRII CCWGG 4 cut(s) 130, 442, 1179, 2127
EcoT14I CCWWGG 4 cut(s) 270, 632, 2079, 2346
EcoT22I ATGCAT 2 cut(s) 1192, 2209
ErhI CCWWGG 4 cut(s) 270, 632, 2079, 2346
Esp3I CGTCTC 1 cut(s) 997
FaqI GGGAC 3 cut(s) 126, 794, 1481
FauNDI CATATG 2 cut(s) 775, 2203
FblI GTMKAC 1 cut(s) 2112
Fnu4HI GCNGC 5 cut(s) 258, 292, 1244, 2149, 2374
FokI GGATG 7 cut(s) 1411, 1621, 1744, 1769, 1970, 2379, 2431
Fsp4HI GCNGC 5 cut(s) 258, 292, 1244, 2149, 2374
FspBI CTAG 9 cut(s) 122, 1283, 1298, 1446, 1650, 1878, 2024, 2189, 2481
GlaI GCGC 2 cut(s) 67, 1433
GluI GCNGC 5 cut(s) 258, 292, 1244, 2149, 2374
GsuI CTGGAG 4 cut(s) 114, 326, 640, 1113
HaeII RGCGCY 2 cut(s) 69, 1435
HaeIII GGCC 4 cut(s) 631, 1593, 2193, 2404
HapII CCGG 4 cut(s) 542, 578, 990, 1429
HhaI GCGC 2 cut(s) 68, 1434
Hin6I GCGC 2 cut(s) 66, 1432
HinP1I GCGC 2 cut(s) 66, 1432
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HindIII AAGCTT 2 cut(s) 909, 1795
HpaII CCGG 4 cut(s) 542, 578, 990, 1429
HphI GGTGA 5 cut(s) 458, 531, 770, 1313, 1930
Hpy166II GTNNAC 6 cut(s) 342, 659, 890, 2113, 2318, 2390
Hpy8I GTNNAC 6 cut(s) 342, 659, 890, 2113, 2318, 2390
Hpy99I CGWCG 1 cut(s) 2494
HpyAV CCTTC 7 cut(s) 102, 1298, 1613, 1618, 1909, 2219, 2492
HpyCH4III ACNGT 5 cut(s) 359, 564, 740, 1472, 2019
HpyCH4IV ACGT 5 cut(s) 1275, 1413, 1999, 2053, 2503
HpyF10VI GCNNNNNNNGC 2 cut(s) 2305, 2357
HpySE526I ACGT 5 cut(s) 1275, 1413, 1999, 2053, 2503
HspAI GCGC 2 cut(s) 66, 1432
KroI GCCGGC 1 cut(s) 577
KroNI GCCGGC 1 cut(s) 579
Kzo9I GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
LmnI GCTCC 4 cut(s) 307, 413, 972, 1132
Lsp1109I GCAGC 4 cut(s) 269, 303, 1255, 2385
LweI GCATC 1 cut(s) 1599
MaeI CTAG 9 cut(s) 122, 1283, 1298, 1446, 1650, 1878, 2024, 2189, 2481
MaeII ACGT 5 cut(s) 1275, 1413, 1999, 2053, 2503
MaeIII GTNAC 5 cut(s) 54, 446, 869, 1764, 1943
MalI GATC 7 cut(s) 534, 607, 1269, 1500, 1700, 1818, 2495
MboI GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
MfeI CAATTG 1 cut(s) 931
MflI RGATCY 2 cut(s) 605, 1267
MmeI TCCRAC 2 cut(s) 538, 2026
Mph1103I ATGCAT 2 cut(s) 1192, 2209
MroNI GCCGGC 1 cut(s) 577
MseI TTAA 9 cut(s) 399, 435, 600, 843, 1322, 1421, 1749, 1857, 1934
MslI CAYNNNNRTG 3 cut(s) 470, 1035, 2206
MspI CCGG 4 cut(s) 542, 578, 990, 1429
MspR9I CCNGG 6 cut(s) 132, 444, 543, 1181, 1429, 2129
MunI CAATTG 1 cut(s) 931
MvaI CCWGG 4 cut(s) 132, 444, 1181, 2129
MwoI GCNNNNNNNGC 2 cut(s) 2305, 2357
NaeI GCCGGC 1 cut(s) 579
NciI CCSGG 2 cut(s) 543, 1429
NcoI CCATGG 3 cut(s) 632, 2079, 2346
NdeI CATATG 2 cut(s) 775, 2203
NdeII GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
NgoMIV GCCGGC 1 cut(s) 577
NheI GCTAGC 1 cut(s) 2480
NlaIV GGNNCC 3 cut(s) 883, 1128, 2126
NmuCI GTSAC 3 cut(s) 54, 446, 869
NsiI ATGCAT 2 cut(s) 1192, 2209
NspI RCATGY 3 cut(s) 469, 2295, 2303
NspV TTCGAA 1 cut(s) 144
PagI TCATGA 2 cut(s) 1495, 1900
PceI AGGCCT 2 cut(s) 2193, 2404
PdiI GCCGGC 1 cut(s) 579
PflMI CCANNNNNTGG 1 cut(s) 1259
PkrI GCNGC 5 cut(s) 259, 293, 1245, 2150, 2375
Ple19I CGATCG 1 cut(s) 2496
PmaCI CACGTG 1 cut(s) 2054
PmlI CACGTG 1 cut(s) 2054
Ppu21I YACGTR 2 cut(s) 2000, 2054
PpuMI RGGWCCY 1 cut(s) 2125
PshBI ATTAAT 2 cut(s) 600, 1857
PsiI TTATAA 1 cut(s) 1602
Psp5II RGGWCCY 1 cut(s) 2125
Psp6I CCWGG 4 cut(s) 130, 442, 1179, 2127
PspCI CACGTG 1 cut(s) 2054
PspGI CCWGG 4 cut(s) 130, 442, 1179, 2127
PspN4I GGNNCC 3 cut(s) 883, 1128, 2126
PspPI GGNCC 7 cut(s) 629, 890, 987, 1221, 1592, 2125, 2387
PspPPI RGGWCCY 1 cut(s) 2125
PstI CTGCAG 1 cut(s) 370
PsuI RGATCY 2 cut(s) 605, 1267
PvuI CGATCG 1 cut(s) 2496
RsaI GTAC 4 cut(s) 19, 75, 1095, 2319
RsaNI GTAC 4 cut(s) 18, 74, 1094, 2318
RseI CAYNNNNRTG 3 cut(s) 470, 1035, 2206
SaqAI TTAA 9 cut(s) 399, 435, 600, 843, 1322, 1421, 1749, 1857, 1934
SatI GCNGC 5 cut(s) 258, 292, 1244, 2149, 2374
Sau3AI GATC 7 cut(s) 532, 605, 1267, 1498, 1698, 1816, 2493
Sau96I GGNCC 7 cut(s) 629, 890, 987, 1221, 1592, 2125, 2387
ScaI AGTACT 1 cut(s) 75
ScrFI CCNGG 6 cut(s) 132, 444, 543, 1181, 1429, 2129
SfaNI GCATC 1 cut(s) 1599
SfcI CTRYAG 3 cut(s) 366, 1368, 2113
SfuI TTCGAA 1 cut(s) 144
SinI GGWCC 5 cut(s) 890, 987, 1221, 2125, 2387
SmiMI CAYNNNNRTG 3 cut(s) 470, 1035, 2206
SpeI ACTAGT 1 cut(s) 1445
SseBI AGGCCT 2 cut(s) 2193, 2404
SsiI CCGC 1 cut(s) 2148
SspI AATATT 1 cut(s) 1861
SspMI CTAG 9 cut(s) 122, 1283, 1298, 1446, 1650, 1878, 2024, 2189, 2481
StuI AGGCCT 2 cut(s) 2193, 2404
StyD4I CCNGG 6 cut(s) 130, 442, 541, 1179, 1427, 2127
StyI CCWWGG 4 cut(s) 270, 632, 2079, 2346
TaaI ACNGT 5 cut(s) 359, 564, 740, 1472, 2019
TaiI ACGT 5 cut(s) 1278, 1416, 2002, 2056, 2506
TaqI TCGA 5 cut(s) 144, 1140, 1477, 1671, 2496
TatI WGTACW 2 cut(s) 73, 2317
TauI GCSGC 1 cut(s) 2151
Tru1I TTAA 9 cut(s) 399, 435, 600, 843, 1322, 1421, 1749, 1857, 1934
Tru9I TTAA 9 cut(s) 399, 435, 600, 843, 1322, 1421, 1749, 1857, 1934
TscAI CASTG 2 cut(s) 623, 2024
TseFI GTSAC 3 cut(s) 54, 446, 869
TseI GCWGC 4 cut(s) 257, 291, 1243, 2373
Tsp45I GTSAC 3 cut(s) 54, 446, 869
TspGWI ACGGA 2 cut(s) 42, 1268
TspRI CASTG 2 cut(s) 623, 2024
Van91I CCANNNNNTGG 1 cut(s) 1259
VpaK11BI GGWCC 5 cut(s) 890, 987, 1221, 2125, 2387
VspI ATTAAT 2 cut(s) 600, 1857
XapI RAATTY 6 cut(s) 502, 750, 765, 1012, 1977, 2422
XbaI TCTAGA 1 cut(s) 2023
XceI RCATGY 3 cut(s) 469, 2295, 2303
XcmI CCANNNNNNNNNTGG 1 cut(s) 623
XmiI GTMKAC 1 cut(s) 2112
XspI CTAG 9 cut(s) 122, 1283, 1298, 1446, 1650, 1878, 2024, 2189, 2481
ZrmI AGTACT 1 cut(s) 75
Zsp2I ATGCAT 2 cut(s) 1192, 2209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.