Prupe.7G016700_v2.0.a1
MYB Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0004859
Physical Location & Seq
Reverse (-)
2411864 .. 2414669
2806 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G016700.1

Sequence Viewer

Length: 1239 bp
ATGGCTCCTCAACATCTGAAGAGTGATTGTGTTGGTTTCACTAGATATGAAGATTTGAACTTTTTGCCACCTCCTCCTGTTTCTCATCAACTTTCTCTGTCAAACACCTTTGTGGCAATGGTTCATCCTCATTTTTATTCTGGAGGGCAAGACCACTCAGGTACTTCTTCTGAGCCTTTCAGCCCCTCATCATCCCAGCGAAGCACGAAACCATGGGGTTTTAAGCCTCTGGAAAATGGGGGAACAAGAACAACTGATCATGGTGATCAGTATCCTGTGCTTCTTGGGATTGATCAGAAAAAGGGCATGCCTTTAAGTCTTGCTGGAGAGGAAGCTGATGAAGGTAGGAGCCTTGCTGCTGCTGGGAGAACTGGTGCTGGTGGGCATACAAAGAGTTGTGCCAGAGGCCATTGGAGACCTGCTGAAGATTCAAAGCTCAAAGAACTTGTGGCCCAATATGGTCCTCAAAACTGGAACTTAATAGCTGAGCATCTTGATGGCAGATCAGGAAAAAGTTGCAGATTGAGGTGGTTTAACCAGCTAGATCCAAGGATCAACAGAAGGGCTTTCAGTGAGGAAGAAGAAGAAAGGCTCCTGGCTGCCCATAAACTTTATGGCAACAAATGGGCCATGATTGCTAGGCTCTTCCCTGGAAGGACTGATAATGCTGTGAAGAACCATTGGCATGTGATCATGGCTAGAAAACACAGAGAGCAATCCAATGTTTACAAGAGAAGAAAGCCTTCTACTCCTCAGGCCACCCAGCTTCCTAAGGAATTTCATCACCCTCCTGTGACCAATTTTCAAAAGAATACCTCCAGCACTGAATCAACTGTCTCAATAAGCACCATTGACGACACTCAATCTGCTTCAACATGCACTGAACTCTCCCTCACTCCCTCCACTAGGCTACCTCTTAGCTTTTTTAGCAAGCTCCATCCGTTTCAGCAACACCAGAACTTTGGATCACAGATGGGCTCATCAAGTGATGGGCGTTCTGGCAAGATCATTGGCAATGGGAATGGCTTGTGCAAAACTGGACCTCTGGAAGGAGCTATGATGGGTGTGGACCAATCTGGTCATCAATCAGATTCAAACTCAGAAATTTCAGGAGATGGATCAGTCACCACCACTAGGACCAATGTGTCATTGTCTGGGGAAAATCAAAACCAAAATCTGAATAATAATGAGAAGATCAGCATGTCCTTCATTGATTTTCTTGGAGTAGGCATGGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000987 GO:0000988 GO:0000989 GO:0001012 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001935 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0007275 GO:0008150 GO:0008283 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009741 GO:0009751 GO:0009753 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0023051 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035670 GO:0040008 GO:0042221 GO:0042493 GO:0042742 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0046677 GO:0046686 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048532 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048585 GO:0048586 GO:0048608 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050673 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051173 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051302 GO:0051704 GO:0051707 GO:0051716 GO:0051782 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071396 GO:0071407 GO:0071495 GO:0080050 GO:0080060 GO:0080090 GO:0080113 GO:0090567 GO:0097159 GO:0097305 GO:0098542 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1904961 GO:1990837 GO:2000022 GO:2000026 GO:2000028 GO:2000031 GO:2000112 GO:2000241 GO:2000242 GO:2001023 GO:2001038 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

413

Amino Acids

45.26

Weight (kDa)

8.72

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1144
Acc36I ACCTGC 1 cut(s) 427
AclWI GGATC 4 cut(s) 539, 560, 973, 1126
AcsI RAATTY 2 cut(s) 776, 1104
AcuI CTGAAG 2 cut(s) 38, 444
AfaI GTAC 1 cut(s) 163
AfiI CCNNNNNNNGG 3 cut(s) 906, 1049, 1134
AgsI TTSAA 5 cut(s) 58, 432, 806, 873, 1095
AjnI CCWGG 2 cut(s) 594, 649
AleI CACNNNNGTG 1 cut(s) 110
AluBI AGCT 8 cut(s) 335, 436, 485, 541, 766, 921, 934, 1055
AluI AGCT 8 cut(s) 335, 436, 485, 541, 766, 921, 934, 1055
Alw26I GTCTC 2 cut(s) 409, 841
AlwI GGATC 4 cut(s) 539, 560, 973, 1126
AoxI GGCC 4 cut(s) 406, 450, 627, 756
ApeKI GCWGC 3 cut(s) 356, 359, 599
ApoI RAATTY 2 cut(s) 776, 1104
Asp700I GAANNNNTTC 1 cut(s) 742
AspS9I GGNCC 6 cut(s) 451, 461, 627, 1040, 1069, 1137
AsuHPI GGTGA 3 cut(s) 275, 776, 1117
AvaII GGWCC 4 cut(s) 461, 1040, 1069, 1137
AxyI CCTNAGG 2 cut(s) 753, 771
BanII GRGCYC 1 cut(s) 980
BbvI GCAGC 3 cut(s) 343, 346, 586
BccI CCATC 6 cut(s) 491, 945, 967, 983, 1054, 1109
BciT130I CCWGG 2 cut(s) 596, 651
BciVI GTATCC 1 cut(s) 282
BclI TGATCA 4 cut(s) 256, 265, 292, 690
BcoDI GTCTC 2 cut(s) 409, 841
BfaI CTAG 6 cut(s) 42, 542, 639, 699, 906, 1134
BfuAI ACCTGC 1 cut(s) 427
BfuI GTATCC 1 cut(s) 282
BisI GCNGC 3 cut(s) 357, 360, 600
BlpI GCTNAGC 1 cut(s) 486
BlsI GCNGC 3 cut(s) 358, 361, 601
Bme1390I CCNGG 2 cut(s) 596, 651
Bme18I GGWCC 4 cut(s) 461, 1040, 1069, 1137
BmgT120I GGNCC 6 cut(s) 451, 461, 627, 1040, 1069, 1137
BmiI GGNNCC 3 cut(s) 6, 350, 593
BmrFI CCNGG 2 cut(s) 596, 651
BmsI GCATC 1 cut(s) 499
BpmI CTGGAG 3 cut(s) 162, 345, 802
Bpu1102I GCTNAGC 1 cut(s) 486
BsaBI GATNNNNATC 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 409
BsaJI CCNNGG 3 cut(s) 212, 548, 649
BsaXI ACNNNNNCTCC 2 cut(s) 358, 388
Bsc4I CCNNNNNNNGG 3 cut(s) 906, 1049, 1134
Bse1I ACTGG 3 cut(s) 376, 476, 1042
Bse21I CCTNAGG 2 cut(s) 753, 771
Bse3DI GCAATG 2 cut(s) 123, 1021
Bse8I GATNNNNATC 1 cut(s) 270
BseBI CCWGG 2 cut(s) 596, 651
BseDI CCNNGG 3 cut(s) 212, 548, 649
BseGI GGATG 3 cut(s) 124, 191, 937
BseJI GATNNNNATC 1 cut(s) 270
BseLI CCNNNNNNNGG 3 cut(s) 906, 1049, 1134
BseMI GCAATG 2 cut(s) 123, 1021
BseMII CTCAG 5 cut(s) 162, 171, 477, 767, 1113
BseNI ACTGG 3 cut(s) 376, 476, 1042
BseRI GAGGAG 2 cut(s) 63, 741
BseXI GCAGC 3 cut(s) 343, 346, 586
BseYI CCCAGC 3 cut(s) 195, 362, 762
BshFI GGCC 4 cut(s) 408, 452, 629, 758
BslI CCNNNNNNNGG 3 cut(s) 906, 1049, 1134
BsmAI GTCTC 2 cut(s) 409, 841
BsnI GGCC 4 cut(s) 408, 452, 629, 758
Bso31I GGTCTC 1 cut(s) 409
Bsp1286I GDGCHC 1 cut(s) 980
Bsp1720I GCTNAGC 1 cut(s) 486
Bsp19I CCATGG 1 cut(s) 212
BspANI GGCC 4 cut(s) 408, 452, 629, 758
BspCNI CTCAG 5 cut(s) 163, 170, 478, 766, 1112
BspLI GGNNCC 3 cut(s) 6, 350, 593
BspMI ACCTGC 1 cut(s) 427
BspPI GGATC 4 cut(s) 539, 560, 973, 1126
BspQI GCTCTTC 1 cut(s) 650
BspTNI GGTCTC 1 cut(s) 409
BsrDI GCAATG 2 cut(s) 123, 1021
BsrI ACTGG 3 cut(s) 376, 476, 1042
BssECI CCNNGG 3 cut(s) 212, 548, 649
BssT1I CCWWGG 2 cut(s) 212, 548
Bst2UI CCWGG 2 cut(s) 596, 651
Bst4CI ACNGT 1 cut(s) 835
Bst6I CTCTTC 2 cut(s) 14, 650
BstC8I GCNNGC 2 cut(s) 308, 932
BstDEI CTNAG 7 cut(s) 157, 171, 486, 753, 771, 917, 1099
BstDSI CCRYGG 1 cut(s) 212
BstENI CCTNNNNNAGG 2 cut(s) 904, 1047
BstF5I GGATG 3 cut(s) 124, 191, 937
BstMAI GTCTC 2 cut(s) 409, 841
BstMWI GCNNNNNNNGC 2 cut(s) 635, 927
BstNI CCWGG 2 cut(s) 596, 651
BstNSI RCATGY 4 cut(s) 310, 689, 879, 1204
BstSCI CCNGG 2 cut(s) 594, 649
BstV1I GCAGC 3 cut(s) 343, 346, 586
BstX2I RGATCY 1 cut(s) 544
BstXI CCANNNNNNTGG 1 cut(s) 962
BstYI RGATCY 1 cut(s) 544
Bsu36I CCTNAGG 2 cut(s) 753, 771
BsuI GTATCC 1 cut(s) 282
BsuRI GGCC 4 cut(s) 408, 452, 629, 758
BtgI CCRYGG 1 cut(s) 212
BtsCI GGATG 3 cut(s) 124, 191, 937
BtsIMutI CAGTG 3 cut(s) 577, 822, 879
BveI ACCTGC 1 cut(s) 427
Cac8I GCNNGC 2 cut(s) 308, 932
Cfr13I GGNCC 6 cut(s) 451, 461, 627, 1040, 1069, 1137
Csp6I GTAC 1 cut(s) 162
CviAII CATG 9 cut(s) 213, 260, 307, 631, 686, 694, 876, 1201, 1231
CviQI GTAC 1 cut(s) 162
DdeI CTNAG 7 cut(s) 157, 171, 486, 753, 771, 917, 1099
DrdI GACNNNNNNGTC 1 cut(s) 1144
DseDI GACNNNNNNGTC 1 cut(s) 1144
Eam1104I CTCTTC 2 cut(s) 14, 650
EarI CTCTTC 2 cut(s) 14, 650
Eco130I CCWWGG 2 cut(s) 212, 548
Eco24I GRGCYC 1 cut(s) 980
Eco31I GGTCTC 1 cut(s) 409
Eco47I GGWCC 4 cut(s) 461, 1040, 1069, 1137
Eco57I CTGAAG 2 cut(s) 38, 444
Eco81I CCTNAGG 2 cut(s) 753, 771
EcoNI CCTNNNNNAGG 2 cut(s) 904, 1047
EcoRII CCWGG 2 cut(s) 594, 649
EcoT14I CCWWGG 2 cut(s) 212, 548
EcoT38I GRGCYC 1 cut(s) 980
ErhI CCWWGG 2 cut(s) 212, 548
FaeI CATG 9 cut(s) 216, 263, 310, 634, 689, 697, 879, 1204, 1234
FalI AAGNNNNNCTT 2 cut(s) 727, 759
FatI CATG 9 cut(s) 212, 259, 306, 630, 685, 693, 875, 1200, 1230
FbaI TGATCA 4 cut(s) 256, 265, 292, 690
Fnu4HI GCNGC 3 cut(s) 357, 360, 600
FokI GGATG 3 cut(s) 111, 178, 924
FriOI GRGCYC 1 cut(s) 980
Fsp4HI GCNGC 3 cut(s) 357, 360, 600
FspBI CTAG 6 cut(s) 42, 542, 639, 699, 906, 1134
GluI GCNGC 3 cut(s) 357, 360, 600
GsaI CCCAGC 3 cut(s) 199, 366, 766
GsuI CTGGAG 3 cut(s) 162, 345, 802
HaeIII GGCC 4 cut(s) 408, 452, 629, 758
Hin1II CATG 9 cut(s) 216, 263, 310, 634, 689, 697, 879, 1204, 1234
HinfI GANTC 3 cut(s) 428, 827, 1091
HphI GGTGA 3 cut(s) 275, 776, 1117
Hpy166II GTNNAC 2 cut(s) 727, 1069
Hpy188I TCNGA 6 cut(s) 18, 172, 297, 1090, 1102, 1179
Hpy188III TCNNGA 6 cut(s) 141, 230, 494, 507, 1046, 1110
Hpy8I GTNNAC 2 cut(s) 727, 1069
HpyAV CCTTC 6 cut(s) 335, 555, 648, 753, 1043, 1216
HpyCH4III ACNGT 1 cut(s) 835
HpyCH4V TGCA 3 cut(s) 519, 879, 1032
HpyF10VI GCNNNNNNNGC 2 cut(s) 635, 927
HpyF3I CTNAG 7 cut(s) 157, 171, 486, 753, 771, 917, 1099
Hsp92II CATG 9 cut(s) 216, 263, 310, 634, 689, 697, 879, 1204, 1234
Ksp22I TGATCA 4 cut(s) 256, 265, 292, 690
LguI GCTCTTC 1 cut(s) 650
LmnI GCTCC 5 cut(s) 10, 348, 597, 939, 1052
Lsp1109I GCAGC 3 cut(s) 343, 346, 586
LweI GCATC 1 cut(s) 499
MaeI CTAG 6 cut(s) 42, 542, 639, 699, 906, 1134
MaeIII GTNAC 2 cut(s) 793, 1123
MflI RGATCY 1 cut(s) 544
MhlI GDGCHC 1 cut(s) 980
MluCI AATT 3 cut(s) 776, 799, 1104
MroXI GAANNNNTTC 1 cut(s) 742
MseI TTAA 5 cut(s) 222, 314, 479, 534, 1237
MslI CAYNNNNRTG 3 cut(s) 110, 495, 684
MspR9I CCNGG 2 cut(s) 596, 651
MvaI CCWGG 2 cut(s) 596, 651
MwoI GCNNNNNNNGC 2 cut(s) 635, 927
NcoI CCATGG 1 cut(s) 212
NlaIII CATG 9 cut(s) 216, 263, 310, 634, 689, 697, 879, 1204, 1234
NlaIV GGNNCC 3 cut(s) 6, 350, 593
NmuCI GTSAC 2 cut(s) 793, 1123
NspI RCATGY 4 cut(s) 310, 689, 879, 1204
OliI CACNNNNGTG 1 cut(s) 110
PaeI GCATGC 1 cut(s) 310
PciSI GCTCTTC 1 cut(s) 650
PdmI GAANNNNTTC 1 cut(s) 742
PfeI GAWTC 3 cut(s) 428, 827, 1091
PkrI GCNGC 3 cut(s) 358, 361, 601
Psp6I CCWGG 2 cut(s) 594, 649
PspFI CCCAGC 3 cut(s) 195, 362, 762
PspGI CCWGG 2 cut(s) 594, 649
PspN4I GGNNCC 3 cut(s) 6, 350, 593
PspPI GGNCC 6 cut(s) 451, 461, 627, 1040, 1069, 1137
PsuI RGATCY 1 cut(s) 544
RsaI GTAC 1 cut(s) 163
RsaNI GTAC 1 cut(s) 162
RseI CAYNNNNRTG 3 cut(s) 110, 495, 684
SapI GCTCTTC 1 cut(s) 650
SaqAI TTAA 5 cut(s) 222, 314, 479, 534, 1237
SatI GCNGC 3 cut(s) 357, 360, 600
Sau96I GGNCC 6 cut(s) 451, 461, 627, 1040, 1069, 1137
ScrFI CCNGG 2 cut(s) 596, 651
SduI GDGCHC 1 cut(s) 980
SfaNI GCATC 1 cut(s) 499
SinI GGWCC 4 cut(s) 461, 1040, 1069, 1137
SmiMI CAYNNNNRTG 3 cut(s) 110, 495, 684
SphI GCATGC 1 cut(s) 310
Sse9I AATT 3 cut(s) 776, 799, 1104
SspMI CTAG 6 cut(s) 42, 542, 639, 699, 906, 1134
StyD4I CCNGG 2 cut(s) 594, 649
StyI CCWWGG 2 cut(s) 212, 548
TaaI ACNGT 1 cut(s) 835
TasI AATT 3 cut(s) 776, 799, 1104
TfiI GAWTC 3 cut(s) 428, 827, 1091
Tru1I TTAA 5 cut(s) 222, 314, 479, 534, 1237
Tru9I TTAA 5 cut(s) 222, 314, 479, 534, 1237
TscAI CASTG 3 cut(s) 577, 829, 886
TseFI GTSAC 2 cut(s) 793, 1123
TseI GCWGC 3 cut(s) 356, 359, 599
Tsp45I GTSAC 2 cut(s) 793, 1123
TspDTI ATGAA 5 cut(s) 63, 113, 354, 770, 1198
TspGWI ACGGA 1 cut(s) 930
TspRI CASTG 3 cut(s) 577, 829, 886
VpaK11BI GGWCC 4 cut(s) 461, 1040, 1069, 1137
XagI CCTNNNNNAGG 2 cut(s) 904, 1047
XapI RAATTY 2 cut(s) 776, 1104
XceI RCATGY 4 cut(s) 310, 689, 879, 1204
XcmI CCANNNNNNNNNTGG 1 cut(s) 611
XmnI GAANNNNTTC 1 cut(s) 742
XspI CTAG 6 cut(s) 42, 542, 639, 699, 906, 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.