transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g27870 FvH4_5g27870 FvH4_5g27870 |
| malus_domestica | MD12G1012700.v1.1 MD14G1010600.v1.1 |
| prunus_persica | Prupe.7G016700_v2.0.a1 |
| pyrus_communis | pycom12g01020 pycom14g00900 |
| rosa_chinensis | RchiOBHm_Chr7g0219951 RchiOBHm_Chr7g0219961 |
| rosa_laevigata | RLG00000002266 RLG00000002267 |
| rosa_multiflora | Rmu_sc0005014.1_g000023 Rmu_sc0011050.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00239850 Rroxscaffold_3G00239860 |
| rosa_rugosa | Rorug07G0188000 Rorug07G0188100 Rorug07G0188200 Rorug07G0188200 Rorug07G0188200 |
| rosa_samantha | Rh7AG331800 Rh7AG331900 Rh7BG321300 Rh7BG321500 Rh7CG349200 Rh7CG349300 Rh7DG327300 Rh7DG327400 |
| rosa_wichuraiana | Rw7G027930 Rw7G027950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 484 |
| AclWI | GGATC | 1 cut(s) | 267 |
| AcuI | CTGAAG | 1 cut(s) | 243 |
| AfaI | GTAC | 2 cut(s) | 58, 725 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 162 |
| AgsI | TTSAA | 4 cut(s) | 88, 232, 499, 637 |
| AjnI | CCWGG | 1 cut(s) | 286 |
| AluBI | AGCT | 3 cut(s) | 67, 295, 673 |
| AluI | AGCT | 3 cut(s) | 67, 295, 673 |
| AlwI | GGATC | 1 cut(s) | 267 |
| ApeKI | GCWGC | 2 cut(s) | 142, 414 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 116, 148 |
| BbvI | GCAGC | 2 cut(s) | 129, 426 |
| BciT130I | CCWGG | 1 cut(s) | 288 |
| BfaI | CTAG | 2 cut(s) | 299, 651 |
| BfmI | CTRYAG | 1 cut(s) | 412 |
| BisI | GCNGC | 2 cut(s) | 143, 415 |
| BlsI | GCNGC | 2 cut(s) | 144, 416 |
| Bme1390I | CCNGG | 1 cut(s) | 288 |
| BmrFI | CCNGG | 1 cut(s) | 288 |
| BmsI | GCATC | 2 cut(s) | 3, 50 |
| BpmI | CTGGAG | 1 cut(s) | 661 |
| BpuEI | CTTGAG | 1 cut(s) | 722 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 162 |
| Bse1I | ACTGG | 2 cut(s) | 167, 644 |
| Bse3DI | GCAATG | 1 cut(s) | 424 |
| BseBI | CCWGG | 1 cut(s) | 288 |
| BseGI | GGATG | 2 cut(s) | 171, 669 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseMI | GCAATG | 1 cut(s) | 424 |
| BseMII | CTCAG | 3 cut(s) | 54, 261, 665 |
| BseNI | ACTGG | 2 cut(s) | 167, 644 |
| BseXI | GCAGC | 2 cut(s) | 129, 426 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 162 |
| Bsp143I | GATC | 2 cut(s) | 259, 490 |
| BspCNI | CTCAG | 3 cut(s) | 55, 262, 666 |
| BspHI | TCATGA | 1 cut(s) | 177 |
| BspMAI | CTGCAG | 1 cut(s) | 416 |
| BspPI | GGATC | 1 cut(s) | 267 |
| BspQI | GCTCTTC | 1 cut(s) | 152 |
| BsrDI | GCAATG | 1 cut(s) | 424 |
| BsrI | ACTGG | 2 cut(s) | 167, 644 |
| BssMI | GATC | 2 cut(s) | 259, 490 |
| BssNAI | GTATAC | 1 cut(s) | 485 |
| Bst1107I | GTATAC | 1 cut(s) | 485 |
| Bst2UI | CCWGG | 1 cut(s) | 288 |
| Bst4CI | ACNGT | 2 cut(s) | 728, 790 |
| Bst6I | CTCTTC | 2 cut(s) | 152, 681 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 608 |
| BstDEI | CTNAG | 4 cut(s) | 63, 270, 332, 674 |
| BstF5I | GGATG | 2 cut(s) | 171, 669 |
| BstKTI | GATC | 2 cut(s) | 262, 493 |
| BstMBI | GATC | 2 cut(s) | 259, 490 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 233, 608, 617 |
| BstNI | CCWGG | 1 cut(s) | 288 |
| BstSCI | CCNGG | 1 cut(s) | 286 |
| BstSFI | CTRYAG | 1 cut(s) | 412 |
| BstV1I | GCAGC | 2 cut(s) | 129, 426 |
| BstX2I | RGATCY | 1 cut(s) | 259 |
| BstYI | RGATCY | 1 cut(s) | 259 |
| BstZ17I | GTATAC | 1 cut(s) | 485 |
| BtsCI | GGATG | 2 cut(s) | 171, 669 |
| BtsI | GCAGTG | 1 cut(s) | 609 |
| BtsIMutI | CAGTG | 2 cut(s) | 160, 609 |
| CciI | TCATGA | 1 cut(s) | 177 |
| Csp6I | GTAC | 2 cut(s) | 57, 724 |
| CviAII | CATG | 4 cut(s) | 178, 365, 456, 508 |
| CviJI | RGCY | 5 cut(s) | 67, 295, 446, 572, 673 |
| CviKI_1 | RGCY | 5 cut(s) | 67, 295, 446, 572, 673 |
| CviQI | GTAC | 2 cut(s) | 57, 724 |
| DdeI | CTNAG | 4 cut(s) | 63, 270, 332, 674 |
| DpnI | GATC | 2 cut(s) | 261, 492 |
| DpnII | GATC | 2 cut(s) | 259, 490 |
| Eam1104I | CTCTTC | 2 cut(s) | 152, 681 |
| EarI | CTCTTC | 2 cut(s) | 152, 681 |
| Eco32I | GATATC | 1 cut(s) | 424 |
| Eco57I | CTGAAG | 1 cut(s) | 243 |
| EcoRII | CCWGG | 1 cut(s) | 286 |
| EcoRV | GATATC | 1 cut(s) | 424 |
| FaeI | CATG | 4 cut(s) | 181, 368, 459, 511 |
| FatI | CATG | 4 cut(s) | 177, 364, 455, 507 |
| FblI | GTMKAC | 1 cut(s) | 484 |
| Fnu4HI | GCNGC | 2 cut(s) | 143, 415 |
| FokI | GGATG | 2 cut(s) | 178, 676 |
| Fsp4HI | GCNGC | 2 cut(s) | 143, 415 |
| FspBI | CTAG | 2 cut(s) | 299, 651 |
| GluI | GCNGC | 2 cut(s) | 143, 415 |
| GsuI | CTGGAG | 1 cut(s) | 661 |
| Hin1II | CATG | 4 cut(s) | 181, 368, 459, 511 |
| HinfI | GANTC | 3 cut(s) | 174, 511, 752 |
| Hpy166II | GTNNAC | 2 cut(s) | 461, 485 |
| Hpy188I | TCNGA | 2 cut(s) | 64, 264 |
| Hpy188III | TCNNGA | 6 cut(s) | 88, 171, 178, 349, 383, 515 |
| Hpy8I | GTNNAC | 2 cut(s) | 461, 485 |
| HpyAV | CCTTC | 3 cut(s) | 346, 555, 700 |
| HpyCH4III | ACNGT | 2 cut(s) | 728, 790 |
| HpyCH4V | TGCA | 4 cut(s) | 16, 41, 73, 414 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 233, 608, 617 |
| HpyF3I | CTNAG | 4 cut(s) | 63, 270, 332, 674 |
| Hsp92II | CATG | 4 cut(s) | 181, 368, 459, 511 |
| Kzo9I | GATC | 2 cut(s) | 259, 490 |
| LguI | GCTCTTC | 1 cut(s) | 152 |
| LmnI | GCTCC | 1 cut(s) | 589 |
| LpnPI | CCDG | 8 cut(s) | 148, 187, 273, 300, 334, 344, 424, 625 |
| Lsp1109I | GCAGC | 2 cut(s) | 129, 426 |
| LweI | GCATC | 2 cut(s) | 3, 50 |
| MaeI | CTAG | 2 cut(s) | 299, 651 |
| MaeIII | GTNAC | 1 cut(s) | 450 |
| MalI | GATC | 2 cut(s) | 261, 492 |
| MboI | GATC | 2 cut(s) | 259, 490 |
| MboII | GAAGA | 3 cut(s) | 139, 698, 761 |
| MflI | RGATCY | 1 cut(s) | 259 |
| MluCI | AATT | 4 cut(s) | 338, 440, 478, 501 |
| MmeI | TCCRAC | 2 cut(s) | 567, 726 |
| MnlI | CCTC | 7 cut(s) | 130, 168, 511, 541, 636, 682, 714 |
| MseI | TTAA | 1 cut(s) | 207 |
| MspR9I | CCNGG | 1 cut(s) | 288 |
| MvaI | CCWGG | 1 cut(s) | 288 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 233, 608, 617 |
| NdeII | GATC | 2 cut(s) | 259, 490 |
| NlaIII | CATG | 4 cut(s) | 181, 368, 459, 511 |
| PagI | TCATGA | 1 cut(s) | 177 |
| PciSI | GCTCTTC | 1 cut(s) | 152 |
| PfeI | GAWTC | 3 cut(s) | 174, 511, 752 |
| PflFI | GACNNNGTC | 1 cut(s) | 242 |
| PkrI | GCNGC | 2 cut(s) | 144, 416 |
| Psp6I | CCWGG | 1 cut(s) | 286 |
| PspGI | CCWGG | 1 cut(s) | 286 |
| PstI | CTGCAG | 1 cut(s) | 416 |
| PsuI | RGATCY | 1 cut(s) | 259 |
| PsyI | GACNNNGTC | 1 cut(s) | 242 |
| RsaI | GTAC | 2 cut(s) | 58, 725 |
| RsaNI | GTAC | 2 cut(s) | 57, 724 |
| SapI | GCTCTTC | 1 cut(s) | 152 |
| SaqAI | TTAA | 1 cut(s) | 207 |
| SatI | GCNGC | 2 cut(s) | 143, 415 |
| Sau3AI | GATC | 2 cut(s) | 259, 490 |
| ScrFI | CCNGG | 1 cut(s) | 288 |
| SfaNI | GCATC | 2 cut(s) | 3, 50 |
| SfcI | CTRYAG | 1 cut(s) | 412 |
| SmlI | CTYRAG | 1 cut(s) | 737 |
| SmoI | CTYRAG | 1 cut(s) | 737 |
| Sse9I | AATT | 4 cut(s) | 338, 440, 478, 501 |
| SspI | AATATT | 1 cut(s) | 79 |
| SspMI | CTAG | 2 cut(s) | 299, 651 |
| StyD4I | CCNGG | 1 cut(s) | 286 |
| TaaI | ACNGT | 2 cut(s) | 728, 790 |
| TasI | AATT | 4 cut(s) | 338, 440, 478, 501 |
| TatI | WGTACW | 1 cut(s) | 56 |
| TfiI | GAWTC | 3 cut(s) | 174, 511, 752 |
| Tru1I | TTAA | 1 cut(s) | 207 |
| Tru9I | TTAA | 1 cut(s) | 207 |
| TscAI | CASTG | 2 cut(s) | 167, 609 |
| TseI | GCWGC | 2 cut(s) | 142, 414 |
| TspDTI | ATGAA | 8 cut(s) | 17, 166, 305, 461, 524, 540, 672, 680 |
| TspGWI | ACGGA | 1 cut(s) | 676 |
| TspRI | CASTG | 2 cut(s) | 167, 609 |
| Tth111I | GACNNNGTC | 1 cut(s) | 242 |
| XmiI | GTMKAC | 1 cut(s) | 484 |
| XspI | CTAG | 2 cut(s) | 299, 651 |