Prupe.7G027400_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
5160896 .. 5161412
517 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G027400.1

Sequence Viewer

Length: 330 bp
ATGGGTAAATGCAAAGGTTGTGGGAAATTAGGAAGAATGATGCCAAGGGGTGGATCTGTGAGTGCATATCAATTTTCCCTTATGTTGTCGCCTGTTGTTTTTGTTTGGGATTGCATCGTTCGCAAAATGAGGTACTCCTACAGACCTGAGTGGTGTAATAAACTGCAACCTGTTGTGAGAAAAGTTAAGAAGCAGGTGATGGACGAGTTGGAGAAAGCCCTTGCTTCTTCGGCTGCCATCATTTCTAAACTAGAAAAGAAAAAACAAAAGCAGAAAGAAGAGCAACAGAGGCTTGATGAAGAAGGTTGCGCTGCATGTTCTACTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

110

Amino Acids

12.48

Weight (kDa)

9.61

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 184
Acc36I ACCTGC 1 cut(s) 184
AccB7I CCANNNNNTGG 1 cut(s) 50
AclWI GGATC 1 cut(s) 61
AfaI GTAC 1 cut(s) 134
AfiI CCNNNNNNNGG 1 cut(s) 50
AlwI GGATC 1 cut(s) 61
ApeKI GCWGC 2 cut(s) 233, 311
AspLEI GCGC 1 cut(s) 311
AsuHPI GGTGA 1 cut(s) 208
BbvI GCAGC 2 cut(s) 220, 298
BccI CCATC 2 cut(s) 193, 245
BfaI CTAG 1 cut(s) 251
BfmI CTRYAG 1 cut(s) 139
BfuAI ACCTGC 1 cut(s) 184
BisI GCNGC 2 cut(s) 234, 312
BlsI GCNGC 2 cut(s) 235, 313
BmsI GCATC 2 cut(s) 30, 123
BsaJI CCNNGG 1 cut(s) 44
Bsc4I CCNNNNNNNGG 1 cut(s) 50
BseDI CCNNGG 1 cut(s) 44
BseLI CCNNNNNNNGG 1 cut(s) 50
BseMII CTCAG 1 cut(s) 138
BseXI GCAGC 2 cut(s) 220, 298
BslI CCNNNNNNNGG 1 cut(s) 50
Bsp143I GATC 1 cut(s) 53
BspCNI CTCAG 1 cut(s) 139
BspMI ACCTGC 1 cut(s) 184
BspPI GGATC 1 cut(s) 61
BspQI GCTCTTC 1 cut(s) 273
BssECI CCNNGG 1 cut(s) 44
BssMI GATC 1 cut(s) 53
BssT1I CCWWGG 1 cut(s) 44
Bst6I CTCTTC 1 cut(s) 273
BstDEI CTNAG 1 cut(s) 147
BstHHI GCGC 1 cut(s) 311
BstKTI GATC 1 cut(s) 56
BstMBI GATC 1 cut(s) 53
BstMWI GCNNNNNNNGC 3 cut(s) 120, 230, 289
BstNSI RCATGY 1 cut(s) 318
BstSFI CTRYAG 1 cut(s) 139
BstV1I GCAGC 2 cut(s) 220, 298
BstX2I RGATCY 1 cut(s) 53
BstYI RGATCY 1 cut(s) 53
BveI ACCTGC 1 cut(s) 184
CfoI GCGC 1 cut(s) 311
Csp6I GTAC 1 cut(s) 133
CspCI CAANNNNNGTGG 1 cut(s) 36
CviAII CATG 1 cut(s) 315
CviJI RGCY 3 cut(s) 218, 233, 292
CviKI_1 RGCY 3 cut(s) 218, 233, 292
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 1 cut(s) 147
DpnI GATC 1 cut(s) 55
DpnII GATC 1 cut(s) 53
Eam1104I CTCTTC 1 cut(s) 273
EarI CTCTTC 1 cut(s) 273
Eco130I CCWWGG 1 cut(s) 44
EcoT14I CCWWGG 1 cut(s) 44
ErhI CCWWGG 1 cut(s) 44
FaeI CATG 1 cut(s) 318
FaiI YATR 3 cut(s) 67, 83, 316
FatI CATG 1 cut(s) 314
Fnu4HI GCNGC 2 cut(s) 234, 312
Fsp4HI GCNGC 2 cut(s) 234, 312
FspBI CTAG 1 cut(s) 251
GlaI GCGC 1 cut(s) 310
GluI GCNGC 2 cut(s) 234, 312
HhaI GCGC 1 cut(s) 311
Hin1II CATG 1 cut(s) 318
Hin6I GCGC 1 cut(s) 309
HinP1I GCGC 1 cut(s) 309
HphI GGTGA 1 cut(s) 208
HpyAV CCTTC 1 cut(s) 296
HpyCH4V TGCA 5 cut(s) 12, 65, 114, 166, 314
HpyF10VI GCNNNNNNNGC 3 cut(s) 120, 230, 289
HpyF3I CTNAG 1 cut(s) 147
Hsp92II CATG 1 cut(s) 318
HspAI GCGC 1 cut(s) 309
Kzo9I GATC 1 cut(s) 53
LguI GCTCTTC 1 cut(s) 273
LpnPI CCDG 4 cut(s) 105, 159, 179, 183
Lsp1109I GCAGC 2 cut(s) 220, 298
LweI GCATC 2 cut(s) 30, 123
MaeI CTAG 1 cut(s) 251
MalI GATC 1 cut(s) 55
MboI GATC 1 cut(s) 53
MboII GAAGA 4 cut(s) 45, 219, 290, 311
MflI RGATCY 1 cut(s) 53
MluCI AATT 2 cut(s) 26, 71
MmeI TCCRAC 1 cut(s) 189
MnlI CCTC 2 cut(s) 123, 282
MseI TTAA 1 cut(s) 186
MwoI GCNNNNNNNGC 3 cut(s) 120, 230, 289
NdeII GATC 1 cut(s) 53
NlaIII CATG 1 cut(s) 318
NspI RCATGY 1 cut(s) 318
PaqCI CACCTGC 1 cut(s) 184
PciSI GCTCTTC 1 cut(s) 273
PflMI CCANNNNNTGG 1 cut(s) 50
PkrI GCNGC 2 cut(s) 235, 313
PsuI RGATCY 1 cut(s) 53
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
SapI GCTCTTC 1 cut(s) 273
SaqAI TTAA 1 cut(s) 186
SatI GCNGC 2 cut(s) 234, 312
Sau3AI GATC 1 cut(s) 53
SetI ASST 6 cut(s) 19, 134, 148, 172, 198, 307
SfaNI GCATC 2 cut(s) 30, 123
SfcI CTRYAG 1 cut(s) 139
SgeI CNNG 9 cut(s) 57, 104, 158, 182, 206, 217, 233, 263, 305
Sse9I AATT 2 cut(s) 26, 71
SspMI CTAG 1 cut(s) 251
StyI CCWWGG 1 cut(s) 44
TasI AATT 2 cut(s) 26, 71
Tru1I TTAA 1 cut(s) 186
Tru9I TTAA 1 cut(s) 186
TseI GCWGC 2 cut(s) 233, 311
TspDTI ATGAA 1 cut(s) 312
Van91I CCANNNNNTGG 1 cut(s) 50
XceI RCATGY 1 cut(s) 318
XspI CTAG 1 cut(s) 251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.