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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25670 AT4G25670 AT4G25690 AT4G25690 AT5G52550 |
| fragaria_vesca | FvH4_7g30190 FvH4_7g30190 |
| malus_domestica | MD01G1207900.v1.1 MD01G1208000.v1.1 MD07G1278500.v1.1 MD07G1278600.v1.1 |
| prunus_persica | Prupe.2G300400_v2.0.a1 Prupe.2G300500_v2.0.a1 Prupe.7G027400_v2.0.a1 |
| pyrus_communis | pycom01g21870 pycom07g25350 |
| rosa_chinensis | RchiOBHm_Chr1g0378241 |
| rosa_laevigata | RLG00000026457 |
| rosa_multiflora | Rmu_sc0006315.1_g000002 Rmu_sc0038642.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00280620 |
| rosa_rugosa | Rorug01G0407300 Rorug01G0407400 |
| rosa_samantha | Rh1AG422400 Rh1BG386700 Rh1CG400300 Rh1DG417900 |
| rosa_wichuraiana | Rw1G037500 Rw1G037510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1095 |
| AatII | GACGTC | 2 cut(s) | 1128, 1972 |
| Acc36I | ACCTGC | 1 cut(s) | 1501 |
| AccB1I | GGYRCC | 4 cut(s) | 34, 229, 625, 826 |
| AccII | CGCG | 2 cut(s) | 153, 1436 |
| AccIII | TCCGGA | 1 cut(s) | 20 |
| AciI | CCGC | 7 cut(s) | 70, 151, 296, 497, 1137, 1755, 1797 |
| AcoI | YGGCCR | 1 cut(s) | 693 |
| AcsI | RAATTY | 1 cut(s) | 985 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AcyI | GRCGYC | 3 cut(s) | 1125, 1648, 1969 |
| AfaI | GTAC | 5 cut(s) | 556, 679, 1688, 2020, 2293 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 27, 295, 1008 |
| AgeI | ACCGGT | 1 cut(s) | 1249 |
| AjnI | CCWGG | 1 cut(s) | 1477 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 87, 119 |
| AluBI | AGCT | 8 cut(s) | 263, 272, 494, 1065, 1767, 1916, 2205, 2331 |
| AluI | AGCT | 8 cut(s) | 263, 272, 494, 1065, 1767, 1916, 2205, 2331 |
| Alw26I | GTCTC | 3 cut(s) | 1116, 1132, 1811 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1624 |
| Ama87I | CYCGRG | 2 cut(s) | 258, 654 |
| Aor13HI | TCCGGA | 1 cut(s) | 20 |
| AoxI | GGCC | 6 cut(s) | 107, 693, 911, 1150, 2146, 2248 |
| ApaI | GGGCCC | 1 cut(s) | 2150 |
| ApoI | RAATTY | 1 cut(s) | 985 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 751, 783 |
| AsiGI | ACCGGT | 1 cut(s) | 1249 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1947 |
| AspA2I | CCTAGG | 3 cut(s) | 410, 605, 806 |
| AspLEI | GCGC | 2 cut(s) | 155, 1989 |
| AspS9I | GGNCC | 5 cut(s) | 107, 1151, 2146, 2147, 2248 |
| AsuHPI | GGTGA | 3 cut(s) | 104, 229, 1757 |
| AsuII | TTCGAA | 1 cut(s) | 2005 |
| AvaI | CYCGRG | 2 cut(s) | 258, 654 |
| AvrII | CCTAGG | 3 cut(s) | 410, 605, 806 |
| AxyI | CCTNAGG | 1 cut(s) | 1857 |
| BaeGI | GKGCMC | 2 cut(s) | 39, 2150 |
| BalI | TGGCCA | 1 cut(s) | 695 |
| BanI | GGYRCC | 4 cut(s) | 34, 229, 625, 826 |
| BanII | GRGCYC | 1 cut(s) | 2150 |
| BauI | CACGAG | 1 cut(s) | 934 |
| BbsI | GAAGAC | 1 cut(s) | 1830 |
| BccI | CCATC | 4 cut(s) | 1596, 2093, 2136, 2317 |
| BceAI | ACGGC | 3 cut(s) | 1548, 2014, 2097 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 2391 |
| BciT130I | CCWGG | 1 cut(s) | 1479 |
| BciVI | GTATCC | 1 cut(s) | 1858 |
| BclI | TGATCA | 1 cut(s) | 2158 |
| BcoDI | GTCTC | 3 cut(s) | 1116, 1132, 1811 |
| BfaI | CTAG | 7 cut(s) | 111, 411, 606, 716, 807, 917, 2310 |
| BfmI | CTRYAG | 3 cut(s) | 1605, 1982, 2361 |
| BfuAI | ACCTGC | 1 cut(s) | 1501 |
| BfuI | GTATCC | 1 cut(s) | 1858 |
| BglII | AGATCT | 4 cut(s) | 133, 718, 919, 1541 |
| BlnI | CCTAGG | 3 cut(s) | 410, 605, 806 |
| Bme1390I | CCNGG | 1 cut(s) | 1479 |
| BmeT110I | CYCGRG | 2 cut(s) | 258, 654 |
| BmgT120I | GGNCC | 5 cut(s) | 107, 1151, 2146, 2147, 2248 |
| BmiI | GGNNCC | 6 cut(s) | 36, 231, 627, 828, 2147, 2148 |
| BmrFI | CCNGG | 1 cut(s) | 1479 |
| BmrI | ACTGGG | 1 cut(s) | 473 |
| BmsI | GCATC | 9 cut(s) | 117, 241, 325, 637, 721, 1796, 2118, 2140, 2417 |
| BmuI | ACTGGG | 1 cut(s) | 473 |
| BpiI | GAAGAC | 1 cut(s) | 1830 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2057, 2089 |
| Bpu10I | CCTNAGC | 3 cut(s) | 513, 708, 1007 |
| Bpu14I | TTCGAA | 1 cut(s) | 2005 |
| BpuEI | CTTGAG | 1 cut(s) | 840 |
| BsaHI | GRCGYC | 3 cut(s) | 1125, 1648, 1969 |
| BsaJI | CCNNGG | 8 cut(s) | 51, 410, 605, 806, 908, 1477, 1478, 2150 |
| BsaWI | WCCGGW | 2 cut(s) | 20, 1249 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 27, 295, 1008 |
| Bse118I | RCCGGY | 1 cut(s) | 1249 |
| Bse1I | ACTGG | 6 cut(s) | 180, 324, 468, 686, 887, 1153 |
| Bse21I | CCTNAGG | 1 cut(s) | 1857 |
| Bse3DI | GCAATG | 8 cut(s) | 342, 383, 543, 584, 779, 800, 939, 980 |
| BseAI | TCCGGA | 1 cut(s) | 20 |
| BseBI | CCWGG | 1 cut(s) | 1479 |
| BseDI | CCNNGG | 8 cut(s) | 51, 410, 605, 806, 908, 1477, 1478, 2150 |
| BseGI | GGATG | 3 cut(s) | 256, 1895, 2104 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 27, 295, 1008 |
| BseMI | GCAATG | 8 cut(s) | 342, 383, 543, 584, 779, 800, 939, 980 |
| BseNI | ACTGG | 6 cut(s) | 180, 324, 468, 686, 887, 1153 |
| BseRI | GAGGAG | 1 cut(s) | 1874 |
| BseSI | GKGCMC | 2 cut(s) | 39, 2150 |
| BsgI | GTGCAG | 1 cut(s) | 2142 |
| Bsh1236I | CGCG | 2 cut(s) | 153, 1436 |
| BshFI | GGCC | 6 cut(s) | 109, 695, 913, 1152, 2148, 2250 |
| BshNI | GGYRCC | 4 cut(s) | 34, 229, 625, 826 |
| BshTI | ACCGGT | 1 cut(s) | 1249 |
| BsiHKCI | CYCGRG | 2 cut(s) | 258, 654 |
| BsiSI | CCGG | 2 cut(s) | 21, 1250 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 27, 295, 1008 |
| BsmAI | GTCTC | 3 cut(s) | 1116, 1132, 1811 |
| BsmBI | CGTCTC | 3 cut(s) | 1116, 1132, 1811 |
| BsmI | GAATGC | 2 cut(s) | 1139, 2277 |
| BsnI | GGCC | 6 cut(s) | 109, 695, 913, 1152, 2148, 2250 |
| BsoBI | CYCGRG | 2 cut(s) | 258, 654 |
| Bsp119I | TTCGAA | 1 cut(s) | 2005 |
| Bsp120I | GGGCCC | 1 cut(s) | 2146 |
| Bsp1286I | GDGCHC | 2 cut(s) | 39, 2150 |
| Bsp13I | TCCGGA | 1 cut(s) | 20 |
| Bsp68I | TCGCGA | 1 cut(s) | 1436 |
| BspACI | CCGC | 7 cut(s) | 70, 151, 296, 497, 1137, 1755, 1797 |
| BspANI | GGCC | 6 cut(s) | 109, 695, 913, 1152, 2148, 2250 |
| BspEI | TCCGGA | 1 cut(s) | 20 |
| BspFNI | CGCG | 2 cut(s) | 153, 1436 |
| BspHI | TCATGA | 1 cut(s) | 1015 |
| BspLI | GGNNCC | 6 cut(s) | 36, 231, 627, 828, 2147, 2148 |
| BspMAI | CTGCAG | 2 cut(s) | 1986, 2365 |
| BspMI | ACCTGC | 1 cut(s) | 1501 |
| BspQI | GCTCTTC | 1 cut(s) | 1377 |
| BspT104I | TTCGAA | 1 cut(s) | 2005 |
| BspT107I | GGYRCC | 4 cut(s) | 34, 229, 625, 826 |
| BsrDI | GCAATG | 8 cut(s) | 342, 383, 543, 584, 779, 800, 939, 980 |
| BsrFI | RCCGGY | 1 cut(s) | 1249 |
| BsrI | ACTGG | 6 cut(s) | 180, 324, 468, 686, 887, 1153 |
| BssAI | RCCGGY | 1 cut(s) | 1249 |
| BssECI | CCNNGG | 8 cut(s) | 51, 410, 605, 806, 908, 1477, 1478, 2150 |
| BssNI | GRCGYC | 3 cut(s) | 1125, 1648, 1969 |
| BssSI | CACGAG | 1 cut(s) | 934 |
| BssT1I | CCWWGG | 5 cut(s) | 51, 410, 605, 806, 908 |
| Bst2BI | CACGAG | 1 cut(s) | 934 |
| Bst2UI | CCWGG | 1 cut(s) | 1479 |
| Bst4CI | ACNGT | 9 cut(s) | 554, 955, 1003, 1180, 1606, 1733, 1924, 2154, 2240 |
| Bst6I | CTCTTC | 7 cut(s) | 201, 1155, 1377, 1809, 1991, 2080, 2181 |
| BstACI | GRCGYC | 3 cut(s) | 1125, 1648, 1969 |
| BstBI | TTCGAA | 1 cut(s) | 2005 |
| BstC8I | GCNNGC | 7 cut(s) | 340, 736, 946, 1289, 1677, 1824, 2252 |
| BstDSI | CCRYGG | 1 cut(s) | 2150 |
| BstEII | GGTNACC | 1 cut(s) | 1745 |
| BstF5I | GGATG | 3 cut(s) | 256, 1895, 2104 |
| BstFNI | CGCG | 2 cut(s) | 153, 1436 |
| BstHHI | GCGC | 2 cut(s) | 155, 1989 |
| BstMAI | GTCTC | 3 cut(s) | 1116, 1132, 1811 |
| BstNI | CCWGG | 1 cut(s) | 1479 |
| BstNSI | RCATGY | 3 cut(s) | 738, 1291, 1675 |
| BstPI | GGTNACC | 1 cut(s) | 1745 |
| BstSCI | CCNGG | 1 cut(s) | 1477 |
| BstSFI | CTRYAG | 3 cut(s) | 1605, 1982, 2361 |
| BstSLI | GKGCMC | 2 cut(s) | 39, 2150 |
| BstUI | CGCG | 2 cut(s) | 153, 1436 |
| BstV2I | GAAGAC | 1 cut(s) | 1830 |
| BstX2I | RGATCY | 8 cut(s) | 133, 322, 718, 919, 1078, 1168, 1541, 1621 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 58, 319 |
| BstYI | RGATCY | 8 cut(s) | 133, 322, 718, 919, 1078, 1168, 1541, 1621 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1857 |
| BsuI | GTATCC | 1 cut(s) | 1858 |
| BsuRI | GGCC | 6 cut(s) | 109, 695, 913, 1152, 2148, 2250 |
| BtgI | CCRYGG | 1 cut(s) | 2150 |
| BtgZI | GCGATG | 3 cut(s) | 390, 585, 2394 |
| BtsCI | GGATG | 3 cut(s) | 256, 1895, 2104 |
| BtsI | GCAGTG | 1 cut(s) | 1979 |
| BtsIMutI | CAGTG | 9 cut(s) | 150, 187, 317, 518, 1146, 1185, 1940, 1979, 2236 |
| BtuMI | TCGCGA | 1 cut(s) | 1436 |
| BveI | ACCTGC | 1 cut(s) | 1501 |
| Cac8I | GCNNGC | 7 cut(s) | 340, 736, 946, 1289, 1677, 1824, 2252 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1624 |
| CciI | TCATGA | 1 cut(s) | 1015 |
| CfoI | GCGC | 2 cut(s) | 155, 1989 |
| Cfr10I | RCCGGY | 1 cut(s) | 1249 |
| Cfr13I | GGNCC | 5 cut(s) | 107, 1151, 2146, 2147, 2248 |
| CseI | GACGC | 3 cut(s) | 1637, 1828, 2355 |
| Csp6I | GTAC | 5 cut(s) | 555, 678, 1687, 2019, 2292 |
| CspAI | ACCGGT | 1 cut(s) | 1249 |
| CviAII | CATG | 9 cut(s) | 735, 1016, 1040, 1223, 1288, 1307, 1334, 1493, 1672 |
| CviQI | GTAC | 5 cut(s) | 555, 678, 1687, 2019, 2292 |
| DraI | TTTAAA | 1 cut(s) | 1912 |
| EaeI | YGGCCR | 1 cut(s) | 693 |
| Eam1104I | CTCTTC | 7 cut(s) | 201, 1155, 1377, 1809, 1991, 2080, 2181 |
| EarI | CTCTTC | 7 cut(s) | 201, 1155, 1377, 1809, 1991, 2080, 2181 |
| EciI | GGCGGA | 1 cut(s) | 1786 |
| Eco130I | CCWWGG | 5 cut(s) | 51, 410, 605, 806, 908 |
| Eco24I | GRGCYC | 1 cut(s) | 2150 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| Eco81I | CCTNAGG | 1 cut(s) | 1857 |
| Eco88I | CYCGRG | 2 cut(s) | 258, 654 |
| Eco91I | GGTNACC | 1 cut(s) | 1745 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2146, 2248 |
| EcoO65I | GGTNACC | 1 cut(s) | 1745 |
| EcoRII | CCWGG | 1 cut(s) | 1477 |
| EcoT14I | CCWWGG | 5 cut(s) | 51, 410, 605, 806, 908 |
| EcoT22I | ATGCAT | 4 cut(s) | 736, 740, 2133, 2410 |
| EcoT38I | GRGCYC | 1 cut(s) | 2150 |
| ErhI | CCWWGG | 5 cut(s) | 51, 410, 605, 806, 908 |
| Esp3I | CGTCTC | 3 cut(s) | 1116, 1132, 1811 |
| FaeI | CATG | 9 cut(s) | 738, 1019, 1043, 1226, 1291, 1310, 1337, 1496, 1675 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 87, 119, 1806, 1838, 1956, 1988 |
| FatI | CATG | 9 cut(s) | 734, 1015, 1039, 1222, 1287, 1306, 1333, 1492, 1671 |
| FauI | CCCGC | 2 cut(s) | 63, 1130 |
| FauNDI | CATATG | 1 cut(s) | 2319 |
| FbaI | TGATCA | 1 cut(s) | 2158 |
| FokI | GGATG | 3 cut(s) | 263, 1882, 2111 |
| FriOI | GRGCYC | 1 cut(s) | 2150 |
| FspBI | CTAG | 7 cut(s) | 111, 411, 606, 716, 807, 917, 2310 |
| GlaI | GCGC | 2 cut(s) | 154, 1988 |
| HaeIII | GGCC | 6 cut(s) | 109, 695, 913, 1152, 2148, 2250 |
| HapII | CCGG | 2 cut(s) | 21, 1250 |
| HgaI | GACGC | 3 cut(s) | 1637, 1828, 2355 |
| HhaI | GCGC | 2 cut(s) | 155, 1989 |
| Hin1I | GRCGYC | 3 cut(s) | 1125, 1648, 1969 |
| Hin1II | CATG | 9 cut(s) | 738, 1019, 1043, 1226, 1291, 1310, 1337, 1496, 1675 |
| Hin6I | GCGC | 2 cut(s) | 153, 1987 |
| HinP1I | GCGC | 2 cut(s) | 153, 1987 |
| HincII | GTYRAC | 2 cut(s) | 301, 502 |
| HindII | GTYRAC | 2 cut(s) | 301, 502 |
| HinfI | GANTC | 8 cut(s) | 7, 17, 47, 140, 452, 523, 932, 2072 |
| HpaII | CCGG | 2 cut(s) | 21, 1250 |
| HphI | GGTGA | 3 cut(s) | 104, 229, 1757 |
| Hpy166II | GTNNAC | 7 cut(s) | 301, 502, 999, 1457, 1689, 1726, 2236 |
| Hpy188III | TCNNGA | 9 cut(s) | 21, 137, 258, 459, 654, 1016, 1119, 1435, 1625 |
| Hpy8I | GTNNAC | 7 cut(s) | 301, 502, 999, 1457, 1689, 1726, 2236 |
| Hpy99I | CGWCG | 1 cut(s) | 2371 |
| HpyAV | CCTTC | 4 cut(s) | 152, 1180, 1408, 1719 |
| HpyCH4III | ACNGT | 9 cut(s) | 554, 955, 1003, 1180, 1606, 1733, 1924, 2154, 2240 |
| HpyCH4IV | ACGT | 4 cut(s) | 1125, 1405, 1969, 2381 |
| HpySE526I | ACGT | 4 cut(s) | 1125, 1405, 1969, 2381 |
| Hsp92I | GRCGYC | 3 cut(s) | 1125, 1648, 1969 |
| Hsp92II | CATG | 9 cut(s) | 738, 1019, 1043, 1226, 1291, 1310, 1337, 1496, 1675 |
| HspAI | GCGC | 2 cut(s) | 153, 1987 |
| Kpn2I | TCCGGA | 1 cut(s) | 20 |
| Ksp22I | TGATCA | 1 cut(s) | 2158 |
| LguI | GCTCTTC | 1 cut(s) | 1377 |
| LmnI | GCTCC | 2 cut(s) | 1140, 1453 |
| LweI | GCATC | 9 cut(s) | 117, 241, 325, 637, 721, 1796, 2118, 2140, 2417 |
| MaeI | CTAG | 7 cut(s) | 111, 411, 606, 716, 807, 917, 2310 |
| MaeII | ACGT | 4 cut(s) | 1125, 1405, 1969, 2381 |
| MaeIII | GTNAC | 7 cut(s) | 235, 315, 421, 616, 817, 1745, 2240 |
| MfeI | CAATTG | 2 cut(s) | 291, 2263 |
| MflI | RGATCY | 8 cut(s) | 133, 322, 718, 919, 1078, 1168, 1541, 1621 |
| MhlI | GDGCHC | 2 cut(s) | 39, 2150 |
| MlsI | TGGCCA | 1 cut(s) | 695 |
| MluNI | TGGCCA | 1 cut(s) | 695 |
| MlyI | GAGTC | 2 cut(s) | 926, 2066 |
| MmeI | TCCRAC | 2 cut(s) | 1286, 1920 |
| Mox20I | TGGCCA | 1 cut(s) | 695 |
| Mph1103I | ATGCAT | 4 cut(s) | 736, 740, 2133, 2410 |
| MroI | TCCGGA | 1 cut(s) | 20 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1947 |
| MscI | TGGCCA | 1 cut(s) | 695 |
| MseI | TTAA | 5 cut(s) | 123, 924, 1112, 1911, 2422 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1044, 1319, 1346 |
| Msp20I | TGGCCA | 1 cut(s) | 695 |
| MspA1I | CMGCKG | 1 cut(s) | 494 |
| MspI | CCGG | 2 cut(s) | 21, 1250 |
| MspR9I | CCNGG | 1 cut(s) | 1479 |
| MunI | CAATTG | 2 cut(s) | 291, 2263 |
| Mva1269I | GAATGC | 2 cut(s) | 1139, 2277 |
| MvaI | CCWGG | 1 cut(s) | 1479 |
| MvnI | CGCG | 2 cut(s) | 153, 1436 |
| NdeI | CATATG | 1 cut(s) | 2319 |
| NlaIII | CATG | 9 cut(s) | 738, 1019, 1043, 1226, 1291, 1310, 1337, 1496, 1675 |
| NlaIV | GGNNCC | 6 cut(s) | 36, 231, 627, 828, 2147, 2148 |
| NmuCI | GTSAC | 4 cut(s) | 235, 315, 616, 1745 |
| NruI | TCGCGA | 1 cut(s) | 1436 |
| NsiI | ATGCAT | 4 cut(s) | 736, 740, 2133, 2410 |
| NspI | RCATGY | 3 cut(s) | 738, 1291, 1675 |
| NspV | TTCGAA | 1 cut(s) | 2005 |
| PaeI | GCATGC | 2 cut(s) | 738, 1291 |
| PaeR7I | CTCGAG | 2 cut(s) | 258, 654 |
| PagI | TCATGA | 1 cut(s) | 1015 |
| PasI | CCCWGGG | 1 cut(s) | 1478 |
| PciSI | GCTCTTC | 1 cut(s) | 1377 |
| PctI | GAATGC | 2 cut(s) | 1139, 2277 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1947 |
| PfeI | GAWTC | 6 cut(s) | 7, 17, 47, 140, 452, 523 |
| PinAI | ACCGGT | 1 cut(s) | 1249 |
| PleI | GAGTC | 2 cut(s) | 926, 2066 |
| PpsI | GAGTC | 2 cut(s) | 926, 2066 |
| PsiI | TTATAA | 1 cut(s) | 1095 |
| Psp6I | CCWGG | 1 cut(s) | 1477 |
| PspEI | GGTNACC | 1 cut(s) | 1745 |
| PspGI | CCWGG | 1 cut(s) | 1477 |
| PspN4I | GGNNCC | 6 cut(s) | 36, 231, 627, 828, 2147, 2148 |
| PspOMI | GGGCCC | 1 cut(s) | 2146 |
| PspPI | GGNCC | 5 cut(s) | 107, 1151, 2146, 2147, 2248 |
| PstI | CTGCAG | 2 cut(s) | 1986, 2365 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1624 |
| PsuI | RGATCY | 8 cut(s) | 133, 322, 718, 919, 1078, 1168, 1541, 1621 |
| PvuII | CAGCTG | 1 cut(s) | 494 |
| RruI | TCGCGA | 1 cut(s) | 1436 |
| RsaI | GTAC | 5 cut(s) | 556, 679, 1688, 2020, 2293 |
| RsaNI | GTAC | 5 cut(s) | 555, 678, 1687, 2019, 2292 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1044, 1319, 1346 |
| SapI | GCTCTTC | 1 cut(s) | 1377 |
| SaqAI | TTAA | 5 cut(s) | 123, 924, 1112, 1911, 2422 |
| Sau96I | GGNCC | 5 cut(s) | 107, 1151, 2146, 2147, 2248 |
| SchI | GAGTC | 2 cut(s) | 926, 2066 |
| ScrFI | CCNGG | 1 cut(s) | 1479 |
| SduI | GDGCHC | 2 cut(s) | 39, 2150 |
| SfaNI | GCATC | 9 cut(s) | 117, 241, 325, 637, 721, 1796, 2118, 2140, 2417 |
| SfcI | CTRYAG | 3 cut(s) | 1605, 1982, 2361 |
| Sfr274I | CTCGAG | 2 cut(s) | 258, 654 |
| SfuI | TTCGAA | 1 cut(s) | 2005 |
| SlaI | CTCGAG | 2 cut(s) | 258, 654 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1044, 1319, 1346 |
| SmlI | CTYRAG | 3 cut(s) | 258, 654, 855 |
| SmoI | CTYRAG | 3 cut(s) | 258, 654, 855 |
| SphI | GCATGC | 2 cut(s) | 738, 1291 |
| SsiI | CCGC | 7 cut(s) | 70, 151, 296, 497, 1137, 1755, 1797 |
| SspMI | CTAG | 7 cut(s) | 111, 411, 606, 716, 807, 917, 2310 |
| StyD4I | CCNGG | 1 cut(s) | 1477 |
| StyI | CCWWGG | 5 cut(s) | 51, 410, 605, 806, 908 |
| TaaI | ACNGT | 9 cut(s) | 554, 955, 1003, 1180, 1606, 1733, 1924, 2154, 2240 |
| TaiI | ACGT | 4 cut(s) | 1128, 1408, 1972, 2384 |
| TaqI | TCGA | 8 cut(s) | 15, 259, 460, 655, 1665, 2005, 2134, 2369 |
| TatI | WGTACW | 3 cut(s) | 554, 677, 2018 |
| TauI | GCSGC | 1 cut(s) | 153 |
| TfiI | GAWTC | 6 cut(s) | 7, 17, 47, 140, 452, 523 |
| Tru1I | TTAA | 5 cut(s) | 123, 924, 1112, 1911, 2422 |
| Tru9I | TTAA | 5 cut(s) | 123, 924, 1112, 1911, 2422 |
| TscAI | CASTG | 9 cut(s) | 150, 187, 324, 525, 1153, 1185, 1940, 1986, 2243 |
| TseFI | GTSAC | 4 cut(s) | 235, 315, 616, 1745 |
| Tsp45I | GTSAC | 4 cut(s) | 235, 315, 616, 1745 |
| TspDTI | ATGAA | 8 cut(s) | 114, 219, 1208, 1482, 1505, 1715, 1830, 2043 |
| TspGWI | ACGGA | 1 cut(s) | 133 |
| TspRI | CASTG | 9 cut(s) | 150, 187, 324, 525, 1153, 1185, 1940, 1986, 2243 |
| XapI | RAATTY | 1 cut(s) | 985 |
| XceI | RCATGY | 3 cut(s) | 738, 1291, 1675 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1037, 1179, 1595 |
| XhoI | CTCGAG | 2 cut(s) | 258, 654 |
| XmaJI | CCTAGG | 3 cut(s) | 410, 605, 806 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1947 |
| XspI | CTAG | 7 cut(s) | 111, 411, 606, 716, 807, 917, 2310 |
| ZraI | GACGTC | 2 cut(s) | 1126, 1970 |
| Zsp2I | ATGCAT | 4 cut(s) | 736, 740, 2133, 2410 |