Rorug01G0407300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0005288
Physical Location & Seq
Reverse (-)
51369601 .. 51383147
13547 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0407300.1

Sequence Viewer

Length: 2052 bp
ATGGTTCCCTCACGTCTATTATTCCTTTCTCCCATTTTGTTACTGATCATAATCACTAGTACCACCGATCAAGCGGCCGCCCTTGCTCAGCCGCAGCCAGCAGCTGATCATCTGCTAAGCCACTTCTGTTCAAACCACAAAGGTAACTACACCACGACGGGTGCCTATCGCACAAACCTTAACCACCTTCTCTCATCCCTTCCCTTCAAGGGTAGCGGCAACGGCTTTTATAGTTCTTCATATGGCCGAAACACTACATCCGGCGCAATATATGCAATCGGACTATGTAAAGGAGACATTGGAACCACGCGCCACTGCCTTCGTTGCCTCAATACCTCTAGAAGTGCTCTCATGGAGCTTTGTGCCAATCAGAAGGAAGCTATTGTTTGGTACGACAACTGCATGCTGCGCTACTCAAACCGCTCCCTATATGGCGTCATGGACACGCTGCCTGCTTTCGATTTGTGGAGCACTCAAAGCGTACCATCATCGGAGTTTGATGTATTTTTCCGGCAGCTCAGGTGGTTACTAGAAGCCCTAAGAAACAAAGCTGCGAAAGGGGGTTCTCTTAAGTTTGCGAAAAATAACGCAACCATTCTCAACTATAGTAACGGACTGTCTTCCTTAACGGCACTTGTGCACTGCACCCCTGATTTGTCCGAGTTACAGTGCAGCACTTGCTTACTTGGTGCTTTTGAAGAACTCCCAAAATGTTGTGATGGAAAGGAAGGTGGGCGAGTTCTTAGACCCAGCTGTAACTTCAACTATCAGCTGAACCAGGTTATTGAGGTCAATAAACCGAAAGGTTCCGTGATTCCCAACTTAGGACGTCGTGCAAGAGATAGAAGAGTAGGCATCCTTATATTATTTGCAATGGTTGTTTCTCTTGTACTAATGATCTCCATAGGCATTTACGCGAAAGTAGTGAAAACAAGGCGACAACCTATCTTAGGGATGAAACATAATTTTCTTGAGAAAATGGATGAGCATATGGCCATGGAATCCTTGCTATTCGACTGTGGCGCCATTCGAGTTGCCACAAATAACTTTTCTGAAGCAAATAAACTTGGAGATGATGGATATGGCACTGTTTACAGGGGTAGTCTTTCCAACGACAAAAGCATAGCAGTGAGGAGGCTTTCAATAAATTATGTGAAAGAGTATACGGAAATTAAGAAAGAGGTTTTGTTAATGGCGCCCAAGCTTCAACATCCAAATCTAGTTGAGCTCCTAGGGTGTGCCTTGGAAGAAAATTCTGAAAGGCTTCTTGTCTACGAGCTTTTCCCTAACGCAACTCTTGATCGCATCATATTTGACCGAATGCAGAGCAGACAATGGGATTGGGAGATCCGGTACAACATCATAGTGAGCATTGCACGGGGACTCCTTCACCTTCATGACAGTCACTTTGTTCATGGCGATGTCAACGCTAGTAACATTTTGATAGATGCAGAAATGAATCCCAAAATTTCAAATTTTGGCATGGCAAGATTCTTTGCGGTTGATCAAATACATGGCAACGTTAACGGAATTCATCTGCTGAATCTGATGTCTAACACATACATGGCTCCAGAGGCAATTGTTGGACATTCATCTGCAGAATCTGATGTCTACAGTTTTGGTGCGTTAGTCGTGGAGATAGTAAGTGGACAAGAAATTAGTAGTTTGGCTTCCGAAAAGCTAAATGATAAGGATCTTCTGAGATTTGCATGGAAGAATTGGGCAGAAGGGACAATTAGAAATCTAATAGACCCAACGTTGTGGACTGGTTCAGGAATTGAATTAATGGAGAGATGCATCAGAATCGGATTATTGTGTATGCAGAGGACTAGAACCGATAGGCCAACCATGTCTTCTGTTACTCAGATGCTTAGTCATTCTTCCTCTATCCCTCTACCTAATAAATTTTGGCATGGTAGCTTTGGGATCATTGGAACCTTGAACAATGTGGAAGGTGTTTCTGATCCAAGGTCTAGAGCAAAAGTTCAACCCTTCATTGCGAAGATGCGGTGTGCCACTACTGGTATCATCAATAAGATACGTAGAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

683

Amino Acids

76.21

Weight (kDa)

9.0

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 43 - 141 1.5e-21 Salt stress response/antifungal
Stress-antifung PF01657 167 - 257 9.4e-08 Salt stress response/antifungal
Pkinase PF00069 351 - 622 1.1e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 353 - 623 7.8e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 832
AccB1I GGYRCC 3 cut(s) 161, 1022, 1195
AccBSI CCGCTC 1 cut(s) 423
AccI GTMKAC 3 cut(s) 1163, 1272, 1611
AccII CGCG 2 cut(s) 310, 917
AciI CCGC 7 cut(s) 74, 78, 92, 216, 421, 1499, 2008
AclI AACGTT 2 cut(s) 1521, 1757
AclWI GGATC 4 cut(s) 1342, 1701, 1934, 1958
AcoI YGGCCR 3 cut(s) 75, 244, 993
AcsI RAATTY 5 cut(s) 1252, 1467, 1474, 1530, 1904
AcuI CTGAAG 1 cut(s) 1074
AcyI GRCGYC 4 cut(s) 435, 829, 1023, 1196
AfaI GTAC 5 cut(s) 61, 392, 483, 891, 1355
AfiI CCNNNNNNNGG 3 cut(s) 209, 824, 950
AflII CTTAAG 1 cut(s) 569
AhlI ACTAGT 1 cut(s) 56
AjiI CACGTC 1 cut(s) 14
AjnI CCWGG 1 cut(s) 777
AjuI GAANNNNNNNTTGG 2 cut(s) 1837, 1869
Alw21I GWGCWC 4 cut(s) 349, 473, 642, 1230
Alw26I GTCTC 1 cut(s) 288
Alw44I GTGCAC 1 cut(s) 638
AlwI GGATC 4 cut(s) 1342, 1701, 1934, 1958
AlwNI CAGNNNCTG 2 cut(s) 104, 1604
AoxI GGCC 4 cut(s) 75, 244, 993, 1841
ApaLI GTGCAC 1 cut(s) 638
ApeKI GCWGC 7 cut(s) 94, 101, 406, 448, 514, 551, 672
ApoI RAATTY 5 cut(s) 1252, 1467, 1474, 1530, 1904
ArsI GACNNNNNNTTYG 2 cut(s) 1391, 1423
AseI ATTAAT 1 cut(s) 1784
Asp700I GAANNNNTTC 1 cut(s) 1263
AspA2I CCTAGG 1 cut(s) 1231
AspLEI GCGC 5 cut(s) 266, 312, 411, 1025, 1198
AsuHPI GGTGA 1 cut(s) 1382
AvrII CCTAGG 1 cut(s) 1231
BaeGI GKGCMC 1 cut(s) 642
BalI TGGCCA 1 cut(s) 995
BanI GGYRCC 3 cut(s) 161, 1022, 1195
BanII GRGCYC 1 cut(s) 1230
BarI GAAGNNNNNNTAC 2 cut(s) 1654, 1686
BbsI GAAGAC 2 cut(s) 612, 1845
Bbv12I GWGCWC 4 cut(s) 349, 473, 642, 1230
BbvI GCAGC 7 cut(s) 106, 113, 393, 435, 526, 538, 684
BccI CCATC 3 cut(s) 493, 713, 1070
BceAI ACGGC 2 cut(s) 238, 645
BcgI CGANNNNNNTGC 2 cut(s) 1786, 1820
BciT130I CCWGG 1 cut(s) 779
BclI TGATCA 3 cut(s) 45, 106, 1504
BcoDI GTCTC 1 cut(s) 288
BcuI ACTAGT 1 cut(s) 56
BfaI CTAG 8 cut(s) 57, 339, 530, 1220, 1232, 1431, 1830, 1974
BfmI CTRYAG 3 cut(s) 604, 1596, 1612
BfoI RGCGCY 2 cut(s) 1026, 1199
BfrI CTTAAG 1 cut(s) 569
BlnI CCTAGG 1 cut(s) 1231
BlpI GCTNAGC 2 cut(s) 87, 116
Bme1390I CCNGG 1 cut(s) 779
BmgBI CACGTC 1 cut(s) 14
BmiI GGNNCC 8 cut(s) 6, 163, 304, 808, 1024, 1197, 1569, 1936
BmrFI CCNGG 1 cut(s) 779
BmsI GCATC 7 cut(s) 864, 1314, 1438, 1784, 1806, 1857, 1995
BpiI GAAGAC 2 cut(s) 612, 1845
BpmI CTGGAG 1 cut(s) 1554
Bpu10I CCTNAGC 1 cut(s) 518
Bpu1102I GCTNAGC 2 cut(s) 87, 116
BpuEI CTTGAG 1 cut(s) 992
BsaAI YACGTR 1 cut(s) 2042
BsaBI GATNNNNATC 2 cut(s) 50, 1692
BsaHI GRCGYC 4 cut(s) 435, 829, 1023, 1196
BsaJI CCNNGG 4 cut(s) 996, 1231, 1242, 1967
BsaWI WCCGGW 1 cut(s) 1350
BsaXI ACNNNNNCTCC 4 cut(s) 1337, 1367, 1368, 1398
Bsc4I CCNNNNNNNGG 3 cut(s) 209, 824, 950
Bse1I ACTGG 2 cut(s) 1771, 2026
Bse3DI GCAATG 3 cut(s) 879, 1371, 1995
Bse8I GATNNNNATC 2 cut(s) 50, 1692
BseBI CCWGG 1 cut(s) 779
BseDI CCNNGG 4 cut(s) 996, 1231, 1242, 1967
BseGI GGATG 6 cut(s) 194, 257, 855, 960, 988, 1210
BseJI GATNNNNATC 2 cut(s) 50, 1692
BseLI CCNNNNNNNGG 3 cut(s) 209, 824, 950
BseMI GCAATG 3 cut(s) 879, 1371, 1995
BseMII CTCAG 4 cut(s) 101, 532, 1691, 1877
BseNI ACTGG 2 cut(s) 1771, 2026
BseRI GAGGAG 1 cut(s) 1147
BseSI GKGCMC 1 cut(s) 642
BseX3I CGGCCG 1 cut(s) 75
BseXI GCAGC 7 cut(s) 106, 113, 393, 435, 526, 538, 684
BseYI CCCAGC 1 cut(s) 749
BsgI GTGCAG 2 cut(s) 628, 691
Bsh1236I CGCG 2 cut(s) 310, 917
Bsh1285I CGRYCG 1 cut(s) 78
BshFI GGCC 4 cut(s) 77, 246, 995, 1843
BshNI GGYRCC 3 cut(s) 161, 1022, 1195
BsiEI CGRYCG 1 cut(s) 78
BsiHKAI GWGCWC 4 cut(s) 349, 473, 642, 1230
BsiSI CCGG 3 cut(s) 261, 511, 1351
BslFI GGGAC 2 cut(s) 1395, 1744
BslI CCNNNNNNNGG 3 cut(s) 209, 824, 950
BsmAI GTCTC 1 cut(s) 288
BsmFI GGGAC 2 cut(s) 1395, 1744
BsmI GAATGC 1 cut(s) 1326
BsnI GGCC 4 cut(s) 77, 246, 995, 1843
Bsp1286I GDGCHC 4 cut(s) 349, 473, 642, 1230
Bsp1720I GCTNAGC 2 cut(s) 87, 116
Bsp19I CCATGG 1 cut(s) 996
BspACI CCGC 7 cut(s) 74, 78, 92, 216, 421, 1499, 2008
BspANI GGCC 4 cut(s) 77, 246, 995, 1843
BspCNI CTCAG 4 cut(s) 100, 531, 1692, 1876
BspFNI CGCG 2 cut(s) 310, 917
BspHI TCATGA 1 cut(s) 1396
BspLI GGNNCC 8 cut(s) 6, 163, 304, 808, 1024, 1197, 1569, 1936
BspMAI CTGCAG 1 cut(s) 1600
BspPI GGATC 4 cut(s) 1342, 1701, 1934, 1958
BspT107I GGYRCC 3 cut(s) 161, 1022, 1195
BspTI CTTAAG 1 cut(s) 569
BsrBI CCGCTC 1 cut(s) 423
BsrDI GCAATG 3 cut(s) 879, 1371, 1995
BsrI ACTGG 2 cut(s) 1771, 2026
BssECI CCNNGG 4 cut(s) 996, 1231, 1242, 1967
BssNAI GTATAC 1 cut(s) 1164
BssNI GRCGYC 4 cut(s) 435, 829, 1023, 1196
BssT1I CCWWGG 4 cut(s) 996, 1231, 1242, 1967
Bst1107I GTATAC 1 cut(s) 1164
Bst2UI CCWGG 1 cut(s) 779
Bst4CI ACNGT 6 cut(s) 618, 669, 1019, 1090, 1403, 1616
Bst6I CTCTTC 1 cut(s) 841
BstACI GRCGYC 4 cut(s) 435, 829, 1023, 1196
BstAFI CTTAAG 1 cut(s) 569
BstAPI GCANNNNNTGC 2 cut(s) 272, 678
BstBAI YACGTR 1 cut(s) 2042
BstC8I GCNNGC 3 cut(s) 99, 404, 453
BstDSI CCRYGG 1 cut(s) 996
BstENI CCTNNNNNAGG 1 cut(s) 948
BstF5I GGATG 6 cut(s) 194, 257, 855, 960, 988, 1210
BstFNI CGCG 2 cut(s) 310, 917
BstH2I RGCGCY 2 cut(s) 1026, 1199
BstHHI GCGC 5 cut(s) 266, 312, 411, 1025, 1198
BstMAI GTCTC 1 cut(s) 288
BstMCI CGRYCG 1 cut(s) 78
BstMWI GCNNNNNNNGC 8 cut(s) 83, 222, 272, 324, 408, 477, 678, 1574
BstNI CCWGG 1 cut(s) 779
BstNSI RCATGY 1 cut(s) 406
BstSCI CCNGG 1 cut(s) 777
BstSFI CTRYAG 3 cut(s) 604, 1596, 1612
BstSLI GKGCMC 1 cut(s) 642
BstSNI TACGTA 1 cut(s) 2042
BstUI CGCG 2 cut(s) 310, 917
BstV1I GCAGC 7 cut(s) 106, 113, 393, 435, 526, 538, 684
BstV2I GAAGAC 2 cut(s) 612, 1845
BstX2I RGATCY 2 cut(s) 1347, 1693
BstXI CCANNNNNNTGG 1 cut(s) 1761
BstYI RGATCY 2 cut(s) 1347, 1693
BstZ17I GTATAC 1 cut(s) 1164
BstZI CGGCCG 1 cut(s) 75
BsuRI GGCC 4 cut(s) 77, 246, 995, 1843
BtgI CCRYGG 1 cut(s) 996
BtgZI GCGATG 1 cut(s) 1434
BtrI CACGTC 1 cut(s) 14
BtsCI GGATG 6 cut(s) 194, 257, 855, 960, 988, 1210
BtsI GCAGTG 3 cut(s) 313, 640, 1134
BtsIMutI CAGTG 5 cut(s) 313, 640, 674, 1086, 1134
Cac8I GCNNGC 3 cut(s) 99, 404, 453
CaiI CAGNNNCTG 2 cut(s) 104, 1604
CciI TCATGA 1 cut(s) 1396
CciNI GCGGCCGC 1 cut(s) 75
CfoI GCGC 5 cut(s) 266, 312, 411, 1025, 1198
CseI GACGC 1 cut(s) 424
CsiI ACCWGGT 1 cut(s) 777
Csp6I GTAC 5 cut(s) 60, 391, 482, 890, 1354
CviQI GTAC 5 cut(s) 60, 391, 482, 890, 1354
DinI GGCGCC 2 cut(s) 1024, 1197
EaeI YGGCCR 3 cut(s) 75, 244, 993
EagI CGGCCG 1 cut(s) 75
Eam1104I CTCTTC 1 cut(s) 841
EarI CTCTTC 1 cut(s) 841
Ecl136II GAGCTC 1 cut(s) 1228
EclXI CGGCCG 1 cut(s) 75
Eco105I TACGTA 1 cut(s) 2042
Eco130I CCWWGG 4 cut(s) 996, 1231, 1242, 1967
Eco24I GRGCYC 1 cut(s) 1230
Eco52I CGGCCG 1 cut(s) 75
Eco53kI GAGCTC 1 cut(s) 1228
Eco57I CTGAAG 1 cut(s) 1074
EcoICRI GAGCTC 1 cut(s) 1228
EcoNI CCTNNNNNAGG 1 cut(s) 948
EcoRI GAATTC 1 cut(s) 1530
EcoRII CCWGG 1 cut(s) 777
EcoT14I CCWWGG 4 cut(s) 996, 1231, 1242, 1967
EcoT22I ATGCAT 1 cut(s) 1799
EcoT38I GRGCYC 1 cut(s) 1230
EgeI GGCGCC 2 cut(s) 1024, 1197
EheI GGCGCC 2 cut(s) 1024, 1197
ErhI CCWWGG 4 cut(s) 996, 1231, 1242, 1967
FaqI GGGAC 2 cut(s) 1395, 1744
FauNDI CATATG 2 cut(s) 241, 990
FbaI TGATCA 3 cut(s) 45, 106, 1504
FblI GTMKAC 3 cut(s) 1163, 1272, 1611
FokI GGATG 6 cut(s) 181, 244, 842, 967, 995, 1197
FriOI GRGCYC 1 cut(s) 1230
FspBI CTAG 8 cut(s) 57, 339, 530, 1220, 1232, 1431, 1830, 1974
GlaI GCGC 5 cut(s) 265, 311, 410, 1024, 1197
GsaI CCCAGC 1 cut(s) 753
GsuI CTGGAG 1 cut(s) 1554
HaeII RGCGCY 2 cut(s) 1026, 1199
HaeIII GGCC 4 cut(s) 77, 246, 995, 1843
HapII CCGG 3 cut(s) 261, 511, 1351
HgaI GACGC 1 cut(s) 424
HhaI GCGC 5 cut(s) 266, 312, 411, 1025, 1198
Hin1I GRCGYC 4 cut(s) 435, 829, 1023, 1196
Hin6I GCGC 5 cut(s) 264, 310, 409, 1023, 1196
HinP1I GCGC 5 cut(s) 264, 310, 409, 1023, 1196
HincII GTYRAC 2 cut(s) 1426, 1525
HindII GTYRAC 2 cut(s) 1426, 1525
HindIII AAGCTT 1 cut(s) 1202
HinfI GANTC 8 cut(s) 814, 1001, 1383, 1459, 1491, 1543, 1601, 1803
HpaI GTTAAC 1 cut(s) 1525
HpaII CCGG 3 cut(s) 261, 511, 1351
HphI GGTGA 1 cut(s) 1382
Hpy166II GTNNAC 9 cut(s) 640, 1093, 1164, 1273, 1426, 1525, 1612, 1649, 1764
Hpy188III TCNNGA 7 cut(s) 339, 971, 1298, 1397, 1571, 1773, 1974
Hpy8I GTNNAC 9 cut(s) 640, 1093, 1164, 1273, 1426, 1525, 1612, 1649, 1764
Hpy99I CGWCG 2 cut(s) 160, 834
HpyCH4III ACNGT 6 cut(s) 618, 669, 1019, 1090, 1403, 1616
HpyCH4IV ACGT 5 cut(s) 13, 829, 1521, 1757, 2041
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 222, 272, 324, 408, 477, 678, 1574
HpySE526I ACGT 5 cut(s) 13, 829, 1521, 1757, 2041
Hsp92I GRCGYC 4 cut(s) 435, 829, 1023, 1196
HspAI GCGC 5 cut(s) 264, 310, 409, 1023, 1196
KasI GGCGCC 2 cut(s) 1022, 1195
Ksp22I TGATCA 3 cut(s) 45, 106, 1504
KspAI GTTAAC 1 cut(s) 1525
LmnI GCTCC 5 cut(s) 355, 428, 468, 1233, 1573
Lsp1109I GCAGC 7 cut(s) 106, 113, 393, 435, 526, 538, 684
LweI GCATC 7 cut(s) 864, 1314, 1438, 1784, 1806, 1857, 1995
MabI ACCWGGT 1 cut(s) 777
MaeI CTAG 8 cut(s) 57, 339, 530, 1220, 1232, 1431, 1830, 1974
MaeII ACGT 5 cut(s) 13, 829, 1521, 1757, 2041
MaeIII GTNAC 9 cut(s) 39, 143, 525, 608, 663, 755, 1403, 1433, 1858
MbiI CCGCTC 1 cut(s) 423
MfeI CAATTG 1 cut(s) 1578
MflI RGATCY 2 cut(s) 1347, 1693
MhlI GDGCHC 4 cut(s) 349, 473, 642, 1230
MlsI TGGCCA 1 cut(s) 995
MluNI TGGCCA 1 cut(s) 995
Mly113I GGCGCC 2 cut(s) 1023, 1196
MlyI GAGTC 1 cut(s) 1377
MmeI TCCRAC 2 cut(s) 1134, 1564
Mox20I TGGCCA 1 cut(s) 995
Mph1103I ATGCAT 1 cut(s) 1799
MroXI GAANNNNTTC 1 cut(s) 1263
MscI TGGCCA 1 cut(s) 995
MseI TTAA 7 cut(s) 180, 570, 626, 1173, 1190, 1524, 1784
MslI CAYNNNNRTG 5 cut(s) 1127, 1364, 1395, 1419, 1562
Msp20I TGGCCA 1 cut(s) 995
MspA1I CMGCKG 3 cut(s) 104, 753, 772
MspCI CTTAAG 1 cut(s) 569
MspI CCGG 3 cut(s) 261, 511, 1351
MspR9I CCNGG 1 cut(s) 779
MunI CAATTG 1 cut(s) 1578
Mva1269I GAATGC 1 cut(s) 1326
MvaI CCWGG 1 cut(s) 779
MvnI CGCG 2 cut(s) 310, 917
MwoI GCNNNNNNNGC 8 cut(s) 83, 222, 272, 324, 408, 477, 678, 1574
NarI GGCGCC 2 cut(s) 1023, 1196
NcoI CCATGG 1 cut(s) 996
NdeI CATATG 2 cut(s) 241, 990
NlaIV GGNNCC 8 cut(s) 6, 163, 304, 808, 1024, 1197, 1569, 1936
NmuCI GTSAC 1 cut(s) 1403
NotI GCGGCCGC 1 cut(s) 75
NsiI ATGCAT 1 cut(s) 1799
NspI RCATGY 1 cut(s) 406
PaeI GCATGC 1 cut(s) 406
PagI TCATGA 1 cut(s) 1396
PctI GAATGC 1 cut(s) 1326
PdmI GAANNNNTTC 1 cut(s) 1263
PfeI GAWTC 7 cut(s) 814, 1001, 1459, 1491, 1543, 1601, 1803
PleI GAGTC 1 cut(s) 1377
PluTI GGCGCC 2 cut(s) 1026, 1199
PpsI GAGTC 1 cut(s) 1377
Ppu21I YACGTR 1 cut(s) 2042
PshBI ATTAAT 1 cut(s) 1784
Psp124BI GAGCTC 1 cut(s) 1230
Psp1406I AACGTT 2 cut(s) 1521, 1757
Psp6I CCWGG 1 cut(s) 777
PspFI CCCAGC 1 cut(s) 749
PspGI CCWGG 1 cut(s) 777
PspN4I GGNNCC 8 cut(s) 6, 163, 304, 808, 1024, 1197, 1569, 1936
PstI CTGCAG 1 cut(s) 1600
PstNI CAGNNNCTG 2 cut(s) 104, 1604
PsuI RGATCY 2 cut(s) 1347, 1693
PvuII CAGCTG 3 cut(s) 104, 753, 772
RsaI GTAC 5 cut(s) 61, 392, 483, 891, 1355
RsaNI GTAC 5 cut(s) 60, 391, 482, 890, 1354
RseI CAYNNNNRTG 5 cut(s) 1127, 1364, 1395, 1419, 1562
SacI GAGCTC 1 cut(s) 1230
SaqAI TTAA 7 cut(s) 180, 570, 626, 1173, 1190, 1524, 1784
SchI GAGTC 1 cut(s) 1377
ScrFI CCNGG 1 cut(s) 779
SduI GDGCHC 4 cut(s) 349, 473, 642, 1230
SexAI ACCWGGT 1 cut(s) 777
SfaNI GCATC 7 cut(s) 864, 1314, 1438, 1784, 1806, 1857, 1995
SfcI CTRYAG 3 cut(s) 604, 1596, 1612
SfoI GGCGCC 2 cut(s) 1024, 1197
SmiMI CAYNNNNRTG 5 cut(s) 1127, 1364, 1395, 1419, 1562
SmlI CTYRAG 2 cut(s) 569, 971
SmoI CTYRAG 2 cut(s) 569, 971
SnaBI TACGTA 1 cut(s) 2042
SpeI ACTAGT 1 cut(s) 56
SphI GCATGC 1 cut(s) 406
SsiI CCGC 7 cut(s) 74, 78, 92, 216, 421, 1499, 2008
SspDI GGCGCC 2 cut(s) 1022, 1195
SspMI CTAG 8 cut(s) 57, 339, 530, 1220, 1232, 1431, 1830, 1974
SstI GAGCTC 1 cut(s) 1230
StyD4I CCNGG 1 cut(s) 777
StyI CCWWGG 4 cut(s) 996, 1231, 1242, 1967
TaaI ACNGT 6 cut(s) 618, 669, 1019, 1090, 1403, 1616
TaiI ACGT 5 cut(s) 16, 832, 1524, 1760, 2044
TaqI TCGA 3 cut(s) 459, 1014, 1030
TaqII GACCGA 1 cut(s) 1332
TatI WGTACW 1 cut(s) 889
TauI GCSGC 4 cut(s) 77, 80, 94, 219
TfiI GAWTC 7 cut(s) 814, 1001, 1459, 1491, 1543, 1601, 1803
Tru1I TTAA 7 cut(s) 180, 570, 626, 1173, 1190, 1524, 1784
Tru9I TTAA 7 cut(s) 180, 570, 626, 1173, 1190, 1524, 1784
TscAI CASTG 5 cut(s) 320, 647, 674, 1093, 1134
TseFI GTSAC 1 cut(s) 1403
TseI GCWGC 7 cut(s) 94, 101, 406, 448, 514, 551, 672
Tsp45I GTSAC 1 cut(s) 1403
TspDTI ATGAA 8 cut(s) 228, 971, 1385, 1403, 1472, 1523, 1581, 1984
TspGWI ACGGA 4 cut(s) 627, 799, 1181, 1542
TspRI CASTG 5 cut(s) 320, 647, 674, 1093, 1134
Vha464I CTTAAG 1 cut(s) 569
VneI GTGCAC 1 cut(s) 638
VspI ATTAAT 1 cut(s) 1784
XagI CCTNNNNNAGG 1 cut(s) 948
XapI RAATTY 5 cut(s) 1252, 1467, 1474, 1530, 1904
XbaI TCTAGA 2 cut(s) 338, 1973
XceI RCATGY 1 cut(s) 406
XmaJI CCTAGG 1 cut(s) 1231
XmiI GTMKAC 3 cut(s) 1163, 1272, 1611
XmnI GAANNNNTTC 1 cut(s) 1263
XspI CTAG 8 cut(s) 57, 339, 530, 1220, 1232, 1431, 1830, 1974
ZraI GACGTC 1 cut(s) 830
Zsp2I ATGCAT 1 cut(s) 1799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.