Prupe.7G056100_v2.0.a1

Mitochondrial

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
9503079 .. 9506344
3266 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G056100.3

Sequence Viewer

Length: 1140 bp
ATGGGGTTAGGGTTAAAGAATTTGGTGAAGAAGGGGATGATGGGGTTGGGAGAGATGGGGTTCAACGCCGGAGGTGGAGCCATCAACTGGTTCCCTGGCCACATGGCTGCAGCCACGCGCGCAATTCGCGAACGGCTCAAGCTCGCCGACTTCGTCATTGAGGTCCGTGACGCTCGCATTCCATTGTCCTCCGCCAACCAAGACCTTCAGCCCCAGCTCCGCTCCAAACGTTCCCTAATTGCCCTCAACAAAAAGGACCTCGCCAACCCCAATATCATGCAAAAATGGACCCGGTATTTCGAATCGTCCAATCAAGATTGCCTTCCCATGAATGCACACAGCAAGAGCTCTGTTTCAAAGCTTCTTGAGCTGGTGGAGTATAAACTGAAGGAAGCCATTTCGAGGGAACCTACTCTGCTTGTTATGGTGGTTGGCGTTCCTAATGTTGGGAAATCAGCTCTAATCAATAATATTCATCGGATTGCATCTTCTCGCTTTCCCGTGCAGGGTAAGATGAAGCGAGCTACAGTGGGCCCATTACCTGGTGTTACTCAAGACATTGCTGGATTCAAGATTGCTCATCAGCCTAGCATATATGTTCTTGACACTCCAGGTGTGTTGGTTCCAAGTATCCCGGACATAGAGACAGGATTAAAGCTAGCTCTTGCAGGATCTATTAAGGATTCGGTTGTAGGGGAGGATCGAATTTCTCAATACTTGCTTGCAGTTTTAAATACACGAGGGACACCTTTTCACTGGAAGAACTCAAATAATAGGAGAATGGAAGGGATTCAATATGAAGCAGAGGAAAAAGTTGACTACAGTCTTAAAAATCTTCGACCTAGTAGGAGGAAGTTGCCAACTAAGTCTCATGTGCTGTACGTTGAGGATCTTGTAACTGAAGTGCAGTGTGCTCTGTATTCGACTCTGTCAGAATTCAATGGCAACATGGAAGACGAGAGTGACTTGGAGGTACTTATAGAACAGCAGTTTGAAGCACTGCAGAAGGCACTAAAGATACCCAATAAGGGGTGTGAAGCTCGCTTGATGGTATCAAAGAAATTCCTTACCTTATTTAGGACGGGTAAGTTAGGCCCCTTCATCCTTGATGATGTCCCAGAAGCTAATCCGCTTTCATGA

Protein Analysis

380

Amino Acids

42.04

Weight (kDa)

9.36

Isoelectric Point (pI)

37.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 87, 542
AccBSI CCGCTC 1 cut(s) 222
AccII CGCG 3 cut(s) 118, 120, 129
AciI CCGC 3 cut(s) 192, 220, 1130
AclI AACGTT 1 cut(s) 229
AclWI GGATC 3 cut(s) 679, 708, 897
AcoI YGGCCR 1 cut(s) 97
AcsI RAATTY 4 cut(s) 19, 705, 935, 1061
AcuI CTGAAG 3 cut(s) 191, 407, 921
AfaI GTAC 2 cut(s) 881, 975
AfiI CCNNNNNNNGG 8 cut(s) 87, 402, 446, 506, 542, 1028, 1029, 1077
AgsI TTSAA 6 cut(s) 64, 357, 571, 794, 940, 995
AjnI CCWGG 3 cut(s) 94, 541, 610
Alw21I GWGCWC 2 cut(s) 350, 916
Alw26I GTCTC 2 cut(s) 638, 873
AlwI GGATC 3 cut(s) 679, 708, 897
AoxI GGCC 3 cut(s) 97, 532, 1093
ApaI GGGCCC 1 cut(s) 536
ApeKI GCWGC 2 cut(s) 107, 110
ApoI RAATTY 4 cut(s) 19, 705, 935, 1061
Asp700I GAANNNNTTC 1 cut(s) 789
AspLEI GCGC 2 cut(s) 120, 122
AspS9I GGNCC 6 cut(s) 163, 256, 288, 532, 533, 1094
AsuC2I CCSGG 2 cut(s) 292, 635
AsuHPI GGTGA 1 cut(s) 37
AsuII TTCGAA 1 cut(s) 300
AsuNHI GCTAGC 1 cut(s) 658
AvaII GGWCC 3 cut(s) 163, 256, 288
BaeGI GKGCMC 1 cut(s) 536
BalI TGGCCA 1 cut(s) 99
BanII GRGCYC 2 cut(s) 350, 536
BauI CACGAG 1 cut(s) 738
BbsI GAAGAC 1 cut(s) 960
Bbv12I GWGCWC 2 cut(s) 350, 916
BbvI GCAGC 2 cut(s) 94, 122
BccI CCATC 4 cut(s) 34, 49, 89, 1042
BceAI ACGGC 1 cut(s) 149
BciT130I CCWGG 3 cut(s) 96, 543, 612
BciVI GTATCC 1 cut(s) 641
BcnI CCSGG 2 cut(s) 292, 635
BcoDI GTCTC 2 cut(s) 638, 873
BfaI CTAG 3 cut(s) 588, 659, 843
BfmI CTRYAG 4 cut(s) 108, 525, 820, 1001
BfuI GTATCC 1 cut(s) 641
BisI GCNGC 2 cut(s) 108, 111
BlsI GCNGC 2 cut(s) 109, 112
Bme1390I CCNGG 5 cut(s) 96, 292, 543, 612, 635
Bme18I GGWCC 3 cut(s) 163, 256, 288
BmgT120I GGNCC 6 cut(s) 163, 256, 288, 532, 533, 1094
BmiI GGNNCC 7 cut(s) 79, 92, 290, 408, 534, 624, 1096
BmrFI CCNGG 5 cut(s) 96, 292, 543, 612, 635
BmsI GCATC 1 cut(s) 494
BmtI GCTAGC 1 cut(s) 662
BoxI GACNNNNGTC 1 cut(s) 822
BpiI GAAGAC 1 cut(s) 960
BpmI CTGGAG 1 cut(s) 594
Bpu14I TTCGAA 1 cut(s) 300
BpuEI CTTGAG 3 cut(s) 122, 386, 537
BpuMI CCSGG 2 cut(s) 292, 635
BsaJI CCNNGG 1 cut(s) 94
Bsc4I CCNNNNNNNGG 8 cut(s) 87, 402, 446, 506, 542, 1028, 1029, 1077
Bse1I ACTGG 2 cut(s) 92, 761
Bse3DI GCAATG 1 cut(s) 558
BseBI CCWGG 3 cut(s) 96, 543, 612
BseDI CCNNGG 1 cut(s) 94
BseGI GGATG 2 cut(s) 42, 1101
BseLI CCNNNNNNNGG 8 cut(s) 87, 402, 446, 506, 542, 1028, 1029, 1077
BseMI GCAATG 1 cut(s) 558
BseNI ACTGG 2 cut(s) 92, 761
BsePI GCGCGC 1 cut(s) 118
BseSI GKGCMC 1 cut(s) 536
BseXI GCAGC 2 cut(s) 94, 122
BseYI CCCAGC 1 cut(s) 213
BsgI GTGCAG 2 cut(s) 524, 926
Bsh1236I CGCG 3 cut(s) 118, 120, 129
BshFI GGCC 3 cut(s) 99, 534, 1095
BsiHKAI GWGCWC 2 cut(s) 350, 916
BsiSI CCGG 3 cut(s) 69, 292, 635
BslFI GGGAC 2 cut(s) 757, 1100
BslI CCNNNNNNNGG 8 cut(s) 87, 402, 446, 506, 542, 1028, 1029, 1077
BsmAI GTCTC 2 cut(s) 638, 873
BsmFI GGGAC 2 cut(s) 757, 1100
BsmI GAATGC 2 cut(s) 177, 337
BsnI GGCC 3 cut(s) 99, 534, 1095
Bsp119I TTCGAA 1 cut(s) 300
Bsp120I GGGCCC 1 cut(s) 532
Bsp1286I GDGCHC 3 cut(s) 350, 536, 916
Bsp143I GATC 3 cut(s) 671, 700, 889
Bsp68I TCGCGA 1 cut(s) 129
BspACI CCGC 3 cut(s) 192, 220, 1130
BspANI GGCC 3 cut(s) 99, 534, 1095
BspFNI CGCG 3 cut(s) 118, 120, 129
BspHI TCATGA 1 cut(s) 1136
BspLI GGNNCC 7 cut(s) 79, 92, 290, 408, 534, 624, 1096
BspMAI CTGCAG 2 cut(s) 112, 1005
BspOI GCTAGC 1 cut(s) 662
BspPI GGATC 3 cut(s) 679, 708, 897
BspT104I TTCGAA 1 cut(s) 300
BsrBI CCGCTC 1 cut(s) 222
BsrDI GCAATG 1 cut(s) 558
BsrI ACTGG 2 cut(s) 92, 761
BssECI CCNNGG 1 cut(s) 94
BssHII GCGCGC 1 cut(s) 118
BssMI GATC 3 cut(s) 671, 700, 889
BssSI CACGAG 1 cut(s) 738
Bst2BI CACGAG 1 cut(s) 738
Bst2UI CCWGG 3 cut(s) 96, 543, 612
Bst4CI ACNGT 2 cut(s) 529, 824
BstBI TTCGAA 1 cut(s) 300
BstC8I GCNNGC 7 cut(s) 120, 144, 175, 522, 660, 723, 1042
BstDEI CTNAG 1 cut(s) 864
BstENI CCTNNNNNAGG 1 cut(s) 1075
BstF5I GGATG 2 cut(s) 42, 1101
BstFNI CGCG 3 cut(s) 118, 120, 129
BstHHI GCGC 2 cut(s) 120, 122
BstKTI GATC 3 cut(s) 674, 703, 892
BstMAI GTCTC 2 cut(s) 638, 873
BstMBI GATC 3 cut(s) 671, 700, 889
BstMWI GCNNNNNNNGC 3 cut(s) 119, 126, 367
BstNI CCWGG 3 cut(s) 96, 543, 612
BstPAI GACNNNNGTC 1 cut(s) 822
BstSCI CCNGG 5 cut(s) 94, 290, 541, 610, 633
BstSFI CTRYAG 4 cut(s) 108, 525, 820, 1001
BstSLI GKGCMC 1 cut(s) 536
BstUI CGCG 3 cut(s) 118, 120, 129
BstV1I GCAGC 2 cut(s) 94, 122
BstV2I GAAGAC 1 cut(s) 960
BstX2I RGATCY 2 cut(s) 671, 889
BstYI RGATCY 2 cut(s) 671, 889
BsuI GTATCC 1 cut(s) 641
BsuRI GGCC 3 cut(s) 99, 534, 1095
BtsCI GGATG 2 cut(s) 42, 1101
BtsI GCAGTG 2 cut(s) 914, 998
BtsIMutI CAGTG 4 cut(s) 534, 754, 914, 998
BtuMI TCGCGA 1 cut(s) 129
Cac8I GCNNGC 7 cut(s) 120, 144, 175, 522, 660, 723, 1042
CciI TCATGA 1 cut(s) 1136
CfoI GCGC 2 cut(s) 120, 122
Cfr13I GGNCC 6 cut(s) 163, 256, 288, 532, 533, 1094
CseI GACGC 1 cut(s) 179
CsiI ACCWGGT 1 cut(s) 541
Csp6I GTAC 2 cut(s) 880, 974
CviAII CATG 6 cut(s) 103, 277, 328, 872, 949, 1137
CviQI GTAC 2 cut(s) 880, 974
DdeI CTNAG 1 cut(s) 864
DpnI GATC 3 cut(s) 673, 702, 891
DpnII GATC 3 cut(s) 671, 700, 889
DraI TTTAAA 1 cut(s) 732
EaeI YGGCCR 1 cut(s) 97
EciI GGCGGA 1 cut(s) 181
Ecl136II GAGCTC 1 cut(s) 348
Eco24I GRGCYC 2 cut(s) 350, 536
Eco47I GGWCC 3 cut(s) 163, 256, 288
Eco53kI GAGCTC 1 cut(s) 348
Eco57I CTGAAG 3 cut(s) 191, 407, 921
EcoICRI GAGCTC 1 cut(s) 348
EcoNI CCTNNNNNAGG 1 cut(s) 1075
EcoO109I RGGNCCY 2 cut(s) 256, 1094
EcoRI GAATTC 1 cut(s) 935
EcoRII CCWGG 3 cut(s) 94, 541, 610
EcoT38I GRGCYC 2 cut(s) 350, 536
FaeI CATG 6 cut(s) 106, 280, 331, 875, 952, 1140
FalI AAGNNNNNCTT 2 cut(s) 306, 338
FaqI GGGAC 2 cut(s) 757, 1100
FatI CATG 6 cut(s) 102, 276, 327, 871, 948, 1136
Fnu4HI GCNGC 2 cut(s) 108, 111
FokI GGATG 2 cut(s) 49, 1088
FriOI GRGCYC 2 cut(s) 350, 536
Fsp4HI GCNGC 2 cut(s) 108, 111
FspBI CTAG 3 cut(s) 588, 659, 843
GlaI GCGC 2 cut(s) 119, 121
GluI GCNGC 2 cut(s) 108, 111
GsaI CCCAGC 1 cut(s) 217
GsuI CTGGAG 1 cut(s) 594
HaeIII GGCC 3 cut(s) 99, 534, 1095
HapII CCGG 3 cut(s) 69, 292, 635
HgaI GACGC 1 cut(s) 179
HhaI GCGC 2 cut(s) 120, 122
Hin1II CATG 6 cut(s) 106, 280, 331, 875, 952, 1140
Hin6I GCGC 2 cut(s) 118, 120
HinP1I GCGC 2 cut(s) 118, 120
HincII GTYRAC 1 cut(s) 817
HindII GTYRAC 1 cut(s) 817
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 5 cut(s) 302, 567, 683, 790, 925
HpaII CCGG 3 cut(s) 69, 292, 635
HphI GGTGA 1 cut(s) 37
Hpy166II GTNNAC 1 cut(s) 817
Hpy188I TCNGA 2 cut(s) 480, 934
Hpy188III TCNNGA 7 cut(s) 128, 314, 365, 554, 571, 602, 1137
Hpy8I GTNNAC 1 cut(s) 817
HpyAV CCTTC 7 cut(s) 25, 215, 332, 382, 779, 1000, 1108
HpyCH4III ACNGT 2 cut(s) 529, 824
HpyCH4IV ACGT 2 cut(s) 229, 882
HpyCH4V TGCA 9 cut(s) 110, 280, 335, 485, 505, 668, 725, 907, 1003
HpyF10VI GCNNNNNNNGC 3 cut(s) 119, 126, 367
HpyF3I CTNAG 1 cut(s) 864
HpySE526I ACGT 2 cut(s) 229, 882
Hsp92II CATG 6 cut(s) 106, 280, 331, 875, 952, 1140
HspAI GCGC 2 cut(s) 118, 120
Kzo9I GATC 3 cut(s) 671, 700, 889
LmnI GCTCC 3 cut(s) 77, 222, 227
Lsp1109I GCAGC 2 cut(s) 94, 122
LweI GCATC 1 cut(s) 494
MabI ACCWGGT 1 cut(s) 541
MaeI CTAG 3 cut(s) 588, 659, 843
MaeII ACGT 2 cut(s) 229, 882
MaeIII GTNAC 4 cut(s) 167, 547, 895, 962
MalI GATC 3 cut(s) 673, 702, 891
MbiI CCGCTC 1 cut(s) 222
MboI GATC 3 cut(s) 671, 700, 889
MboII GAAGA 5 cut(s) 40, 480, 772, 827, 965
MflI RGATCY 2 cut(s) 671, 889
MhlI GDGCHC 3 cut(s) 350, 536, 916
MlsI TGGCCA 1 cut(s) 99
MluCI AATT 6 cut(s) 19, 123, 237, 705, 935, 1061
MluNI TGGCCA 1 cut(s) 99
MlyI GAGTC 1 cut(s) 919
Mox20I TGGCCA 1 cut(s) 99
MroXI GAANNNNTTC 1 cut(s) 789
MscI TGGCCA 1 cut(s) 99
MseI TTAA 5 cut(s) 14, 653, 678, 731, 828
Msp20I TGGCCA 1 cut(s) 99
MspI CCGG 3 cut(s) 69, 292, 635
MspR9I CCNGG 5 cut(s) 96, 292, 543, 612, 635
Mva1269I GAATGC 2 cut(s) 177, 337
MvaI CCWGG 3 cut(s) 96, 543, 612
MvnI CGCG 3 cut(s) 118, 120, 129
MwoI GCNNNNNNNGC 3 cut(s) 119, 126, 367
NciI CCSGG 2 cut(s) 292, 635
NdeII GATC 3 cut(s) 671, 700, 889
NheI GCTAGC 1 cut(s) 658
NlaIII CATG 6 cut(s) 106, 280, 331, 875, 952, 1140
NlaIV GGNNCC 7 cut(s) 79, 92, 290, 408, 534, 624, 1096
NmuCI GTSAC 2 cut(s) 167, 962
NruI TCGCGA 1 cut(s) 129
NspV TTCGAA 1 cut(s) 300
PagI TCATGA 1 cut(s) 1136
PauI GCGCGC 1 cut(s) 118
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 2 cut(s) 177, 337
PdmI GAANNNNTTC 1 cut(s) 789
PfeI GAWTC 4 cut(s) 302, 567, 683, 790
PflFI GACNNNGTC 2 cut(s) 152, 928
PflMI CCANNNNNTGG 2 cut(s) 87, 542
PfoI TCCNGGA 1 cut(s) 633
PkrI GCNGC 2 cut(s) 109, 112
PleI GAGTC 1 cut(s) 919
PpsI GAGTC 1 cut(s) 919
PpuMI RGGWCCY 1 cut(s) 256
PshAI GACNNNNGTC 1 cut(s) 822
Psp124BI GAGCTC 1 cut(s) 350
Psp1406I AACGTT 1 cut(s) 229
Psp5II RGGWCCY 1 cut(s) 256
Psp6I CCWGG 3 cut(s) 94, 541, 610
PspFI CCCAGC 1 cut(s) 213
PspGI CCWGG 3 cut(s) 94, 541, 610
PspN4I GGNNCC 7 cut(s) 79, 92, 290, 408, 534, 624, 1096
PspOMI GGGCCC 1 cut(s) 532
PspPI GGNCC 6 cut(s) 163, 256, 288, 532, 533, 1094
PspPPI RGGWCCY 1 cut(s) 256
PstI CTGCAG 2 cut(s) 112, 1005
PsuI RGATCY 2 cut(s) 671, 889
PsyI GACNNNGTC 2 cut(s) 152, 928
PteI GCGCGC 1 cut(s) 118
RruI TCGCGA 1 cut(s) 129
RsaI GTAC 2 cut(s) 881, 975
RsaNI GTAC 2 cut(s) 880, 974
SacI GAGCTC 1 cut(s) 350
SaqAI TTAA 5 cut(s) 14, 653, 678, 731, 828
SatI GCNGC 2 cut(s) 108, 111
Sau3AI GATC 3 cut(s) 671, 700, 889
Sau96I GGNCC 6 cut(s) 163, 256, 288, 532, 533, 1094
SchI GAGTC 1 cut(s) 919
ScrFI CCNGG 5 cut(s) 96, 292, 543, 612, 635
SduI GDGCHC 3 cut(s) 350, 536, 916
SexAI ACCWGGT 1 cut(s) 541
SfaNI GCATC 1 cut(s) 494
SfcI CTRYAG 4 cut(s) 108, 525, 820, 1001
SfuI TTCGAA 1 cut(s) 300
SinI GGWCC 3 cut(s) 163, 256, 288
SmlI CTYRAG 3 cut(s) 137, 365, 552
SmoI CTYRAG 3 cut(s) 137, 365, 552
Sse9I AATT 6 cut(s) 19, 123, 237, 705, 935, 1061
SsiI CCGC 3 cut(s) 192, 220, 1130
SspI AATATT 1 cut(s) 472
SspMI CTAG 3 cut(s) 588, 659, 843
SstI GAGCTC 1 cut(s) 350
StyD4I CCNGG 5 cut(s) 94, 290, 541, 610, 633
TaaI ACNGT 2 cut(s) 529, 824
TaiI ACGT 2 cut(s) 232, 885
TaqI TCGA 5 cut(s) 300, 401, 703, 838, 923
TasI AATT 6 cut(s) 19, 123, 237, 705, 935, 1061
TfiI GAWTC 4 cut(s) 302, 567, 683, 790
Tru1I TTAA 5 cut(s) 14, 653, 678, 731, 828
Tru9I TTAA 5 cut(s) 14, 653, 678, 731, 828
TscAI CASTG 4 cut(s) 534, 761, 914, 1005
TseFI GTSAC 2 cut(s) 167, 962
TseI GCWGC 2 cut(s) 107, 110
Tsp45I GTSAC 2 cut(s) 167, 962
TspDTI ATGAA 6 cut(s) 344, 464, 530, 813, 1090, 1125
TspGWI ACGGA 1 cut(s) 155
TspRI CASTG 4 cut(s) 534, 761, 914, 1005
Tth111I GACNNNGTC 2 cut(s) 152, 928
Van91I CCANNNNNTGG 2 cut(s) 87, 542
VpaK11BI GGWCC 3 cut(s) 163, 256, 288
XagI CCTNNNNNAGG 1 cut(s) 1075
XapI RAATTY 4 cut(s) 19, 705, 935, 1061
XmnI GAANNNNTTC 1 cut(s) 789
XspI CTAG 3 cut(s) 588, 659, 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.