Prupe.7G056300_v2.0.a1

Mitochondrial

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
9549750 .. 9553168
3419 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G056300.2

Sequence Viewer

Length: 1062 bp
ATGGGGTTAGGGTTAAAGAATTTGGTGAAGAAGAGGATGATGGGGTTGGGAGAGATGGGGTTCAACGCCGGAGGTGGAGCCATCAAGTGGTTCCCTGGCCACATGGCTGCAGCCAAGCGCGCAATCCGCGACCGGCTCAAGCTCGCCGACTTCGTCATTGAGGTCCGTGACGCTCGCATTCCATTGTCCTCCGCCAACCAAGACCTTCAGCCCCAGCTCCGCTCCAAACGTTCCCTAATTGCCCTCAACAAAAAGGACCTCGCCAACCCCAATATCATGCAACTTCTTGAGCTGGTGGAGTATAAACTGAAGGAAGCCATTTCGAGGGAACCTACTCTGCTTGTTATGGTGGTTGGCGTTGCTAATGTTGGGAAATCATCTCTAATCAATAATATTCATCGGATTGCATCTTCTAGCTTTCCCGTGCAGGGTAAGATGAAGCGAGCTACAGTGGGCCCATTACCTGGTGTTACTCAAGACATTGCTGGATTCAAGATTGGTCATCAGCCTAGCATATATGTTCTTGACACTCCAGGTGTGTTGGTTCCAAGTATCCCAGACATAGAGACAGGATTAAAGCTAGCTCTTACAGGATCTAGTAAGGATTCGGTTGTAGGGGAGGATCGAATTGCTCAATACTTGCTTGCAATTTTAAATACACAAGGGACACCCTTTCACTGGAAGAACTCAAATAATAGGAGAATGGAAGGGATTCAATATGAAGCAAAGGAAAAAGTTGACTACAGTCTTAAAAATCTTCGACCTAGTAGGAGGAAGTTGCCAACTAAGTCTCATGTGCTGTACGTTGAGGATCTTGTAACTGAAGTGCAGCATGCTCTGTATTCGACTCTGTCAGAATTCAATGGCAACACGGAGGATGAGAGTGACTTGGTGGTACTTATAGAACAGCAGTTTGAATCACTGCAGAAGGCACGAAAGATACCCAATGAGGGGTCGGAAGCTCGCTTGATGATATCAAAGAAATTCCTTACCTTATTTAGGACGGGTAAGTTAGGCCCTTTCATCCTTGATGATGTCCCAGAAGCTAATCCGCTTTCATGA

Protein Analysis

354

Amino Acids

39.06

Weight (kDa)

9.6

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 87, 464
AccBSI CCGCTC 1 cut(s) 222
AccII CGCG 2 cut(s) 120, 129
AciI CCGC 4 cut(s) 127, 192, 220, 1052
AclI AACGTT 1 cut(s) 229
AclWI GGATC 3 cut(s) 601, 630, 819
AcoI YGGCCR 1 cut(s) 97
AcsI RAATTY 3 cut(s) 19, 857, 983
AcuI CTGAAG 3 cut(s) 191, 329, 843
AfaI GTAC 2 cut(s) 803, 897
AfiI CCNNNNNNNGG 8 cut(s) 87, 324, 428, 464, 678, 950, 951, 999
AgsI TTSAA 5 cut(s) 64, 493, 716, 862, 917
AjnI CCWGG 3 cut(s) 94, 463, 532
AluBI AGCT 9 cut(s) 142, 217, 292, 417, 446, 580, 584, 962, 1046
AluI AGCT 9 cut(s) 142, 217, 292, 417, 446, 580, 584, 962, 1046
Alw26I GTCTC 2 cut(s) 560, 795
AlwI GGATC 3 cut(s) 601, 630, 819
AoxI GGCC 3 cut(s) 97, 454, 1015
ApaI GGGCCC 1 cut(s) 458
ApeKI GCWGC 3 cut(s) 107, 110, 829
ApoI RAATTY 3 cut(s) 19, 857, 983
Asp700I GAANNNNTTC 1 cut(s) 711
AspLEI GCGC 2 cut(s) 120, 122
AspS9I GGNCC 5 cut(s) 163, 256, 454, 455, 1016
AsuHPI GGTGA 1 cut(s) 37
AsuNHI GCTAGC 1 cut(s) 580
AvaII GGWCC 2 cut(s) 163, 256
BaeGI GKGCMC 1 cut(s) 458
BalI TGGCCA 1 cut(s) 99
BanII GRGCYC 1 cut(s) 458
BbvI GCAGC 3 cut(s) 94, 122, 841
BccI CCATC 3 cut(s) 34, 49, 89
BciT130I CCWGG 3 cut(s) 96, 465, 534
BciVI GTATCC 1 cut(s) 563
BcoDI GTCTC 2 cut(s) 560, 795
BfaI CTAG 5 cut(s) 414, 510, 581, 597, 765
BfmI CTRYAG 4 cut(s) 108, 447, 742, 923
BfuI GTATCC 1 cut(s) 563
BisI GCNGC 3 cut(s) 108, 111, 830
BlsI GCNGC 3 cut(s) 109, 112, 831
Bme1390I CCNGG 3 cut(s) 96, 465, 534
Bme18I GGWCC 2 cut(s) 163, 256
BmgT120I GGNCC 5 cut(s) 163, 256, 454, 455, 1016
BmiI GGNNCC 5 cut(s) 79, 92, 330, 456, 546
BmrFI CCNGG 3 cut(s) 96, 465, 534
BmsI GCATC 1 cut(s) 416
BmtI GCTAGC 1 cut(s) 584
BoxI GACNNNNGTC 1 cut(s) 744
BpmI CTGGAG 1 cut(s) 516
BpuEI CTTGAG 3 cut(s) 122, 308, 459
BsaJI CCNNGG 1 cut(s) 94
Bsc4I CCNNNNNNNGG 8 cut(s) 87, 324, 428, 464, 678, 950, 951, 999
Bse118I RCCGGY 1 cut(s) 132
Bse1I ACTGG 1 cut(s) 683
Bse3DI GCAATG 1 cut(s) 480
BseBI CCWGG 3 cut(s) 96, 465, 534
BseDI CCNNGG 1 cut(s) 94
BseGI GGATG 3 cut(s) 42, 883, 1023
BseLI CCNNNNNNNGG 8 cut(s) 87, 324, 428, 464, 678, 950, 951, 999
BseMI GCAATG 1 cut(s) 480
BseNI ACTGG 1 cut(s) 683
BsePI GCGCGC 1 cut(s) 118
BseSI GKGCMC 1 cut(s) 458
BseXI GCAGC 3 cut(s) 94, 122, 841
BseYI CCCAGC 1 cut(s) 213
BsgI GTGCAG 2 cut(s) 446, 848
Bsh1236I CGCG 2 cut(s) 120, 129
Bsh1285I CGRYCG 1 cut(s) 133
BshFI GGCC 3 cut(s) 99, 456, 1017
BsiEI CGRYCG 1 cut(s) 133
BsiSI CCGG 2 cut(s) 69, 133
BslFI GGGAC 2 cut(s) 679, 1022
BslI CCNNNNNNNGG 8 cut(s) 87, 324, 428, 464, 678, 950, 951, 999
BsmAI GTCTC 2 cut(s) 560, 795
BsmFI GGGAC 2 cut(s) 679, 1022
BsmI GAATGC 1 cut(s) 177
BsnI GGCC 3 cut(s) 99, 456, 1017
Bsp120I GGGCCC 1 cut(s) 454
Bsp1286I GDGCHC 1 cut(s) 458
Bsp143I GATC 3 cut(s) 593, 622, 811
BspACI CCGC 4 cut(s) 127, 192, 220, 1052
BspANI GGCC 3 cut(s) 99, 456, 1017
BspFNI CGCG 2 cut(s) 120, 129
BspHI TCATGA 1 cut(s) 1058
BspLI GGNNCC 5 cut(s) 79, 92, 330, 456, 546
BspMAI CTGCAG 2 cut(s) 112, 927
BspOI GCTAGC 1 cut(s) 584
BspPI GGATC 3 cut(s) 601, 630, 819
BsrBI CCGCTC 1 cut(s) 222
BsrDI GCAATG 1 cut(s) 480
BsrFI RCCGGY 1 cut(s) 132
BsrI ACTGG 1 cut(s) 683
BssAI RCCGGY 1 cut(s) 132
BssECI CCNNGG 1 cut(s) 94
BssHII GCGCGC 1 cut(s) 118
BssMI GATC 3 cut(s) 593, 622, 811
Bst2UI CCWGG 3 cut(s) 96, 465, 534
Bst4CI ACNGT 2 cut(s) 451, 746
Bst6I CTCTTC 1 cut(s) 26
BstC8I GCNNGC 8 cut(s) 120, 144, 175, 444, 582, 645, 834, 964
BstDEI CTNAG 1 cut(s) 786
BstENI CCTNNNNNAGG 1 cut(s) 997
BstF5I GGATG 3 cut(s) 42, 883, 1023
BstFNI CGCG 2 cut(s) 120, 129
BstHHI GCGC 2 cut(s) 120, 122
BstKTI GATC 3 cut(s) 596, 625, 814
BstMAI GTCTC 2 cut(s) 560, 795
BstMBI GATC 3 cut(s) 593, 622, 811
BstMCI CGRYCG 1 cut(s) 133
BstMWI GCNNNNNNNGC 2 cut(s) 119, 126
BstNI CCWGG 3 cut(s) 96, 465, 534
BstNSI RCATGY 1 cut(s) 836
BstPAI GACNNNNGTC 1 cut(s) 744
BstSCI CCNGG 3 cut(s) 94, 463, 532
BstSFI CTRYAG 4 cut(s) 108, 447, 742, 923
BstSLI GKGCMC 1 cut(s) 458
BstUI CGCG 2 cut(s) 120, 129
BstV1I GCAGC 3 cut(s) 94, 122, 841
BstX2I RGATCY 2 cut(s) 593, 811
BstYI RGATCY 2 cut(s) 593, 811
BsuI GTATCC 1 cut(s) 563
BsuRI GGCC 3 cut(s) 99, 456, 1017
BtsCI GGATG 3 cut(s) 42, 883, 1023
BtsI GCAGTG 1 cut(s) 920
BtsIMutI CAGTG 3 cut(s) 456, 676, 920
Cac8I GCNNGC 8 cut(s) 120, 144, 175, 444, 582, 645, 834, 964
CciI TCATGA 1 cut(s) 1058
CfoI GCGC 2 cut(s) 120, 122
Cfr10I RCCGGY 1 cut(s) 132
Cfr13I GGNCC 5 cut(s) 163, 256, 454, 455, 1016
CseI GACGC 1 cut(s) 179
CsiI ACCWGGT 1 cut(s) 463
Csp6I GTAC 2 cut(s) 802, 896
CviAII CATG 5 cut(s) 103, 277, 794, 833, 1059
CviQI GTAC 2 cut(s) 802, 896
DdeI CTNAG 1 cut(s) 786
DpnI GATC 3 cut(s) 595, 624, 813
DpnII GATC 3 cut(s) 593, 622, 811
DraI TTTAAA 1 cut(s) 654
EaeI YGGCCR 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 26
EarI CTCTTC 1 cut(s) 26
EciI GGCGGA 1 cut(s) 181
Eco24I GRGCYC 1 cut(s) 458
Eco32I GATATC 1 cut(s) 975
Eco47I GGWCC 2 cut(s) 163, 256
Eco57I CTGAAG 3 cut(s) 191, 329, 843
EcoNI CCTNNNNNAGG 1 cut(s) 997
EcoO109I RGGNCCY 2 cut(s) 256, 1016
EcoRI GAATTC 1 cut(s) 857
EcoRII CCWGG 3 cut(s) 94, 463, 532
EcoRV GATATC 1 cut(s) 975
EcoT38I GRGCYC 1 cut(s) 458
FaeI CATG 5 cut(s) 106, 280, 797, 836, 1062
FaqI GGGAC 2 cut(s) 679, 1022
FatI CATG 5 cut(s) 102, 276, 793, 832, 1058
Fnu4HI GCNGC 3 cut(s) 108, 111, 830
FokI GGATG 3 cut(s) 49, 890, 1010
FriOI GRGCYC 1 cut(s) 458
Fsp4HI GCNGC 3 cut(s) 108, 111, 830
FspBI CTAG 5 cut(s) 414, 510, 581, 597, 765
GlaI GCGC 2 cut(s) 119, 121
GluI GCNGC 3 cut(s) 108, 111, 830
GsaI CCCAGC 1 cut(s) 217
GsuI CTGGAG 1 cut(s) 516
HaeIII GGCC 3 cut(s) 99, 456, 1017
HapII CCGG 2 cut(s) 69, 133
HgaI GACGC 1 cut(s) 179
HhaI GCGC 2 cut(s) 120, 122
Hin1II CATG 5 cut(s) 106, 280, 797, 836, 1062
Hin6I GCGC 2 cut(s) 118, 120
HinP1I GCGC 2 cut(s) 118, 120
HincII GTYRAC 1 cut(s) 739
HindII GTYRAC 1 cut(s) 739
HinfI GANTC 5 cut(s) 489, 605, 712, 847, 917
HpaII CCGG 2 cut(s) 69, 133
HphI GGTGA 1 cut(s) 37
Hpy166II GTNNAC 1 cut(s) 739
Hpy188I TCNGA 3 cut(s) 402, 856, 958
Hpy188III TCNNGA 5 cut(s) 287, 476, 493, 524, 1059
Hpy8I GTNNAC 1 cut(s) 739
HpyAV CCTTC 4 cut(s) 215, 304, 701, 922
HpyCH4III ACNGT 2 cut(s) 451, 746
HpyCH4IV ACGT 2 cut(s) 229, 804
HpyCH4V TGCA 7 cut(s) 110, 280, 407, 427, 647, 829, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 119, 126
HpyF3I CTNAG 1 cut(s) 786
HpySE526I ACGT 2 cut(s) 229, 804
Hsp92II CATG 5 cut(s) 106, 280, 797, 836, 1062
HspAI GCGC 2 cut(s) 118, 120
Kzo9I GATC 3 cut(s) 593, 622, 811
LmnI GCTCC 3 cut(s) 77, 222, 227
Lsp1109I GCAGC 3 cut(s) 94, 122, 841
LweI GCATC 1 cut(s) 416
MabI ACCWGGT 1 cut(s) 463
MaeI CTAG 5 cut(s) 414, 510, 581, 597, 765
MaeII ACGT 2 cut(s) 229, 804
MaeIII GTNAC 4 cut(s) 167, 469, 817, 884
MalI GATC 3 cut(s) 595, 624, 813
MbiI CCGCTC 1 cut(s) 222
MboI GATC 3 cut(s) 593, 622, 811
MboII GAAGA 5 cut(s) 40, 43, 402, 694, 749
MflI RGATCY 2 cut(s) 593, 811
MhlI GDGCHC 1 cut(s) 458
MlsI TGGCCA 1 cut(s) 99
MluCI AATT 6 cut(s) 19, 237, 627, 648, 857, 983
MluNI TGGCCA 1 cut(s) 99
MlyI GAGTC 1 cut(s) 841
MmeI TCCRAC 1 cut(s) 936
Mox20I TGGCCA 1 cut(s) 99
MroXI GAANNNNTTC 1 cut(s) 711
MscI TGGCCA 1 cut(s) 99
MseI TTAA 4 cut(s) 14, 575, 653, 750
Msp20I TGGCCA 1 cut(s) 99
MspI CCGG 2 cut(s) 69, 133
MspR9I CCNGG 3 cut(s) 96, 465, 534
Mva1269I GAATGC 1 cut(s) 177
MvaI CCWGG 3 cut(s) 96, 465, 534
MvnI CGCG 2 cut(s) 120, 129
MwoI GCNNNNNNNGC 2 cut(s) 119, 126
NdeII GATC 3 cut(s) 593, 622, 811
NheI GCTAGC 1 cut(s) 580
NlaIII CATG 5 cut(s) 106, 280, 797, 836, 1062
NlaIV GGNNCC 5 cut(s) 79, 92, 330, 456, 546
NmuCI GTSAC 2 cut(s) 167, 884
NspI RCATGY 1 cut(s) 836
PaeI GCATGC 1 cut(s) 836
PagI TCATGA 1 cut(s) 1058
PauI GCGCGC 1 cut(s) 118
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 1 cut(s) 177
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 4 cut(s) 489, 605, 712, 917
PflFI GACNNNGTC 2 cut(s) 152, 850
PflMI CCANNNNNTGG 2 cut(s) 87, 464
PkrI GCNGC 3 cut(s) 109, 112, 831
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
PpuMI RGGWCCY 1 cut(s) 256
PshAI GACNNNNGTC 1 cut(s) 744
Psp1406I AACGTT 1 cut(s) 229
Psp5II RGGWCCY 1 cut(s) 256
Psp6I CCWGG 3 cut(s) 94, 463, 532
PspFI CCCAGC 1 cut(s) 213
PspGI CCWGG 3 cut(s) 94, 463, 532
PspN4I GGNNCC 5 cut(s) 79, 92, 330, 456, 546
PspOMI GGGCCC 1 cut(s) 454
PspPI GGNCC 5 cut(s) 163, 256, 454, 455, 1016
PspPPI RGGWCCY 1 cut(s) 256
PstI CTGCAG 2 cut(s) 112, 927
PsuI RGATCY 2 cut(s) 593, 811
PsyI GACNNNGTC 2 cut(s) 152, 850
PteI GCGCGC 1 cut(s) 118
RsaI GTAC 2 cut(s) 803, 897
RsaNI GTAC 2 cut(s) 802, 896
SaqAI TTAA 4 cut(s) 14, 575, 653, 750
SatI GCNGC 3 cut(s) 108, 111, 830
Sau3AI GATC 3 cut(s) 593, 622, 811
Sau96I GGNCC 5 cut(s) 163, 256, 454, 455, 1016
SchI GAGTC 1 cut(s) 841
ScrFI CCNGG 3 cut(s) 96, 465, 534
SduI GDGCHC 1 cut(s) 458
SexAI ACCWGGT 1 cut(s) 463
SfaNI GCATC 1 cut(s) 416
SfcI CTRYAG 4 cut(s) 108, 447, 742, 923
SinI GGWCC 2 cut(s) 163, 256
SmlI CTYRAG 3 cut(s) 137, 287, 474
SmoI CTYRAG 3 cut(s) 137, 287, 474
SphI GCATGC 1 cut(s) 836
Sse9I AATT 6 cut(s) 19, 237, 627, 648, 857, 983
SsiI CCGC 4 cut(s) 127, 192, 220, 1052
SspI AATATT 1 cut(s) 394
SspMI CTAG 5 cut(s) 414, 510, 581, 597, 765
StyD4I CCNGG 3 cut(s) 94, 463, 532
TaaI ACNGT 2 cut(s) 451, 746
TaiI ACGT 2 cut(s) 232, 807
TaqI TCGA 4 cut(s) 323, 625, 760, 845
TasI AATT 6 cut(s) 19, 237, 627, 648, 857, 983
TfiI GAWTC 4 cut(s) 489, 605, 712, 917
Tru1I TTAA 4 cut(s) 14, 575, 653, 750
Tru9I TTAA 4 cut(s) 14, 575, 653, 750
TscAI CASTG 3 cut(s) 456, 683, 927
TseFI GTSAC 2 cut(s) 167, 884
TseI GCWGC 3 cut(s) 107, 110, 829
Tsp45I GTSAC 2 cut(s) 167, 884
TspDTI ATGAA 5 cut(s) 386, 452, 735, 1012, 1047
TspGWI ACGGA 2 cut(s) 155, 887
TspRI CASTG 3 cut(s) 456, 683, 927
Tth111I GACNNNGTC 2 cut(s) 152, 850
Van91I CCANNNNNTGG 2 cut(s) 87, 464
VpaK11BI GGWCC 2 cut(s) 163, 256
XagI CCTNNNNNAGG 1 cut(s) 997
XapI RAATTY 3 cut(s) 19, 857, 983
XceI RCATGY 1 cut(s) 836
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 5 cut(s) 414, 510, 581, 597, 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.