Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005497

Physical Location & Seq

Genomic Coordinates Forward (+)

11387451 .. 11391526

Gene Structure 4076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G077600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGGAGAAGAGCAATTCGTTCAAAGGCCCTCAAAACCCATGGAGCGCCGATTTAGGACTTGGCACCAGCGATCGGAGATTGGCGTTTTCGCGCCAAGCCTCGTTCCAGCAATACCACGAACCACACACGCCGGTTTCGATCAATCTCAACGACTCTGAGGCGACGCCGTTTCTCTCGCGGAGCGTGTCGAGCATTGACGTTCCTCCAGGGGCGTATTTGGCAGAGGAAAATGACAAGCTTTTCGGGGAACGAAGAGTTTCGGCCGAGAAATTATCCGTCTTGTTGGTTTTTGAATCGGTGTTTCGGATTTTGAGGTCCGGAAATCGGTATATGAAGAGATTGTTCTTGTTGATTTCGCTTAATGTGGCGTATTCGACCGCGGAGCTATGTATTGGACTCTTCACGGGACGTATAGGTTTGGTGTCAGATTCATTTCATTTAAGTTTTGGGTGTGGCTTATTAACGTTTTCATTGTTCGCTATGGCTGCTTCTCGAAAGAAACCTGATGCAATTTACACTTATGGGTATAAAAGGCTAGAAGTTTTGTCTGCTTTTACCAATGCTCTGTTTCTTTTGTTTATGTCATTCTCCTTGGCTGTGGAAGCACTTCATGCGTTCATACAGGATGAATCTGAACACAAGCATTACTTGATTGTTTCGGCAGTGACAAATCTACTGGTGAATCTTATTGGTGTTTGGTTCTTCAGAAATTATGCTCGTGTCAATCTTGTTTACAGAAACGCAGAAGATATGAACAACCACTCAGTTTGCCTGCATGTTCTTGCAGATTCCATTCGTAGTGCAGGGTTGATATTGGCATCTTGGTTTCTGTCTCTGGGGGTTCAGAATGCAGAAGTTTTGTGTTTCGGACTAGTTTCAGTTGCAGTTTTTATGCTTGTAATGCCATTATTTAGAGCGAGTGGTGGTATTCTACTTCAAATGGCACCACCAAACGTTCCAACTTCTGCATTGAGCAAATGCTGGCGACAGATTACTGCCCGCGAAGATGTTTCTGAAGTTTCTCAAGCACGGTTTTGGGAATTGGTTCCTGGTCATGTTGTTGGCTCACTTTCAATACAGGTAAAGAAGGGGATAGATGATCGCCCCATACTTCAATTAGTGCATGGTTTGTACCATGATTTGGGAATACAGGACTTGACAGTGCAAGCTGACAATGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005385 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0010035 GO:0010038 GO:0010043 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0032879 GO:0034220 GO:0042221 GO:0042592 GO:0043207 GO:0046873 GO:0046915 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0061088 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_efflux

Protein Analysis

394

Amino Acids

43.7

Weight (kDa)

7.17

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12100 AT3G12100
fragaria_vesca	FvH4_6g22170
malus_domestica	MD12G1056600.v1.1 MD14G1055100.v1.1
prunus_persica	Prupe.7G077600_v2.0.a1 Prupe.7G077600_v2.0.a1
pyrus_communis	pycom12g05070 pycom14g04540
rosa_chinensis	RchiOBHm_Chr2g0145321 RchiOBHm_Chr3g0479521
rosa_laevigata	RLG00000023562
rosa_multiflora	Rmu_sc0001786.1_g000012 Rmu_sc0004732.1_g000002 Rmu_sc0016947.1_g000001
rosa_roxburghii	Rroxscaffold_6G00402170
rosa_rugosa	Rorug03G0176200
rosa_samantha	Rh3AG227000 Rh3CG257000 Rh3DG252600 Rh3DG352500 Rh4AG055300 Rh4BG053300 Rh5BG537800 Rh5CG561700 Rh7DG359200
rosa_wichuraiana	Rw3G020280 Rw4G012830 Rw6G021660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	62, 943
AccB7I	CCANNNNNTGG	1 cut(s)	1141
AccII	CGCG	4 cut(s)	91, 178, 380, 1002
AccIII	TCCGGA	1 cut(s)	317
AciI	CCGC	4 cut(s)	178, 378, 380, 1000
AclI	AACGTT	2 cut(s)	464, 954
AcoI	YGGCCR	1 cut(s)	261
AcuI	CTGAAG	2 cut(s)	688, 1035
AcyI	GRCGYC	1 cut(s)	164
AfaI	GTAC	1 cut(s)	1133
AfiI	CCNNNNNNNGG	3 cut(s)	72, 324, 1141
AgsI	TTSAA	5 cut(s)	22, 293, 938, 1074, 1115
AhlI	ACTAGT	1 cut(s)	871
AjnI	CCWGG	2 cut(s)	205, 1048
AluBI	AGCT	3 cut(s)	238, 385, 1169
AluI	AGCT	3 cut(s)	238, 385, 1169
Alw26I	GTCTC	1 cut(s)	837
Aor13HI	TCCGGA	1 cut(s)	317
AoxI	GGCC	2 cut(s)	25, 261
ApeKI	GCWGC	1 cut(s)	485
ArsI	GACNNNNNNTTYG	2 cut(s)	224, 256
Asp700I	GAANNNNTTC	3 cut(s)	256, 606, 1044
AspLEI	GCGC	2 cut(s)	47, 93
AspS9I	GGNCC	2 cut(s)	26, 315
AsuHPI	GGTGA	1 cut(s)	691
AvaII	GGWCC	1 cut(s)	315
BanI	GGYRCC	2 cut(s)	62, 943
BauI	CACGAG	1 cut(s)	717
BbvI	GCAGC	1 cut(s)	472
BceAI	ACGGC	1 cut(s)	151
BciT130I	CCWGG	2 cut(s)	207, 1050
BcoDI	GTCTC	1 cut(s)	837
BcuI	ACTAGT	1 cut(s)	871
BfaI	CTAG	2 cut(s)	536, 872
BfoI	RGCGCY	1 cut(s)	48
BisI	GCNGC	1 cut(s)	486
BlsI	GCNGC	1 cut(s)	487
Bme1390I	CCNGG	2 cut(s)	207, 1050
Bme18I	GGWCC	1 cut(s)	315
BmgT120I	GGNCC	2 cut(s)	26, 315
BmiI	GGNNCC	3 cut(s)	64, 945, 1047
BmrFI	CCNGG	2 cut(s)	207, 1050
BmsI	GCATC	2 cut(s)	496, 827
BpmI	CTGGAG	1 cut(s)	189
BpuEI	CTTGAG	1 cut(s)	1008
BsaHI	GRCGYC	1 cut(s)	164
BsaJI	CCNNGG	4 cut(s)	38, 206, 378, 591
BsaWI	WCCGGW	1 cut(s)	317
Bsc4I	CCNNNNNNNGG	3 cut(s)	72, 324, 1141
Bse118I	RCCGGY	1 cut(s)	130
Bse1I	ACTGG	1 cut(s)	681
BseAI	TCCGGA	1 cut(s)	317
BseBI	CCWGG	2 cut(s)	207, 1050
BseDI	CCNNGG	4 cut(s)	38, 206, 378, 591
BseGI	GGATG	1 cut(s)	631
BseLI	CCNNNNNNNGG	3 cut(s)	72, 324, 1141
BseMII	CTCAG	2 cut(s)	147, 777
BseNI	ACTGG	1 cut(s)	681
BseX3I	CGGCCG	1 cut(s)	261
BseXI	GCAGC	1 cut(s)	472
BsgI	GTGCAG	1 cut(s)	822
Bsh1236I	CGCG	4 cut(s)	91, 178, 380, 1002
Bsh1285I	CGRYCG	3 cut(s)	73, 264, 378
BshFI	GGCC	2 cut(s)	27, 263
BshNI	GGYRCC	2 cut(s)	62, 943
BsiEI	CGRYCG	3 cut(s)	73, 264, 378
BsiSI	CCGG	2 cut(s)	131, 318
BslFI	GGGAC	1 cut(s)	420
BslI	CCNNNNNNNGG	3 cut(s)	72, 324, 1141
BsmAI	GTCTC	1 cut(s)	837
BsmFI	GGGAC	1 cut(s)	420
BsmI	GAATGC	1 cut(s)	853
BsnI	GGCC	2 cut(s)	27, 263
Bsp13I	TCCGGA	1 cut(s)	317
Bsp143I	GATC	3 cut(s)	70, 138, 1099
Bsp19I	CCATGG	1 cut(s)	38
BspACI	CCGC	4 cut(s)	178, 378, 380, 1000
BspANI	GGCC	2 cut(s)	27, 263
BspCNI	CTCAG	2 cut(s)	148, 776
BspEI	TCCGGA	1 cut(s)	317
BspFNI	CGCG	4 cut(s)	91, 178, 380, 1002
BspLI	GGNNCC	3 cut(s)	64, 945, 1047
BspQI	GCTCTTC	1 cut(s)	2
BspT107I	GGYRCC	2 cut(s)	62, 943
BsrFI	RCCGGY	1 cut(s)	130
BsrI	ACTGG	1 cut(s)	681
BssAI	RCCGGY	1 cut(s)	130
BssECI	CCNNGG	4 cut(s)	38, 206, 378, 591
BssMI	GATC	3 cut(s)	70, 138, 1099
BssNI	GRCGYC	1 cut(s)	164
BssSI	CACGAG	1 cut(s)	717
BssT1I	CCWWGG	2 cut(s)	38, 591
Bst2BI	CACGAG	1 cut(s)	717
Bst2UI	CCWGG	2 cut(s)	207, 1050
Bst4CI	ACNGT	2 cut(s)	1032, 1162
Bst6I	CTCTTC	4 cut(s)	2, 247, 329, 404
BstACI	GRCGYC	1 cut(s)	164
BstAPI	GCANNNNNTGC	1 cut(s)	611
BstC8I	GCNNGC	4 cut(s)	773, 983, 1000, 1167
BstDEI	CTNAG	2 cut(s)	156, 763
BstDSI	CCRYGG	2 cut(s)	38, 378
BstF5I	GGATG	1 cut(s)	631
BstFNI	CGCG	4 cut(s)	91, 178, 380, 1002
BstH2I	RGCGCY	1 cut(s)	48
BstHHI	GCGC	2 cut(s)	47, 93
BstKTI	GATC	3 cut(s)	73, 141, 1102
BstMAI	GTCTC	1 cut(s)	837
BstMBI	GATC	3 cut(s)	70, 138, 1099
BstMCI	CGRYCG	3 cut(s)	73, 264, 378
BstMWI	GCNNNNNNNGC	6 cut(s)	189, 218, 485, 602, 611, 901
BstNI	CCWGG	2 cut(s)	207, 1050
BstNSI	RCATGY	1 cut(s)	779
BstSCI	CCNGG	2 cut(s)	205, 1048
BstUI	CGCG	4 cut(s)	91, 178, 380, 1002
BstV1I	GCAGC	1 cut(s)	472
BstZI	CGGCCG	1 cut(s)	261
BsuRI	GGCC	2 cut(s)	27, 263
BtgI	CCRYGG	2 cut(s)	38, 378
BtsCI	GGATG	1 cut(s)	631
BtsI	GCAGTG	1 cut(s)	669
BtsIMutI	CAGTG	2 cut(s)	669, 1167
Cac8I	GCNNGC	4 cut(s)	773, 983, 1000, 1167
CfoI	GCGC	2 cut(s)	47, 93
Cfr10I	RCCGGY	1 cut(s)	130
Cfr13I	GGNCC	2 cut(s)	26, 315
Cfr42I	CCGCGG	1 cut(s)	381
CseI	GACGC	1 cut(s)	172
Csp6I	GTAC	1 cut(s)	1132
CspCI	CAANNNNNGTGG	2 cut(s)	749, 784
CviAII	CATG	6 cut(s)	39, 611, 776, 1055, 1124, 1136
CviQI	GTAC	1 cut(s)	1132
DdeI	CTNAG	2 cut(s)	156, 763
DpnI	GATC	3 cut(s)	72, 140, 1101
DpnII	GATC	3 cut(s)	70, 138, 1099
EaeI	YGGCCR	1 cut(s)	261
EagI	CGGCCG	1 cut(s)	261
Eam1104I	CTCTTC	4 cut(s)	2, 247, 329, 404
EarI	CTCTTC	4 cut(s)	2, 247, 329, 404
EclXI	CGGCCG	1 cut(s)	261
Eco130I	CCWWGG	2 cut(s)	38, 591
Eco47I	GGWCC	1 cut(s)	315
Eco52I	CGGCCG	1 cut(s)	261
Eco57I	CTGAAG	2 cut(s)	688, 1035
EcoO109I	RGGNCCY	1 cut(s)	26
EcoRII	CCWGG	2 cut(s)	205, 1048
EcoT14I	CCWWGG	2 cut(s)	38, 591
ErhI	CCWWGG	2 cut(s)	38, 591
FaeI	CATG	6 cut(s)	42, 614, 779, 1058, 1127, 1139
FalI	AAGNNNNNCTT	2 cut(s)	632, 664
FaqI	GGGAC	1 cut(s)	420
FatI	CATG	6 cut(s)	38, 610, 775, 1054, 1123, 1135
FauI	CCCGC	1 cut(s)	1007
Fnu4HI	GCNGC	1 cut(s)	486
FokI	GGATG	1 cut(s)	638
Fsp4HI	GCNGC	1 cut(s)	486
FspBI	CTAG	2 cut(s)	536, 872
GlaI	GCGC	2 cut(s)	46, 92
GluI	GCNGC	1 cut(s)	486
GsuI	CTGGAG	1 cut(s)	189
HaeII	RGCGCY	1 cut(s)	48
HaeIII	GGCC	2 cut(s)	27, 263
HapII	CCGG	2 cut(s)	131, 318
HgaI	GACGC	1 cut(s)	172
HhaI	GCGC	2 cut(s)	47, 93
Hin1I	GRCGYC	1 cut(s)	164
Hin1II	CATG	6 cut(s)	42, 614, 779, 1058, 1127, 1139
Hin6I	GCGC	2 cut(s)	45, 91
HinP1I	GCGC	2 cut(s)	45, 91
HindIII	AAGCTT	1 cut(s)	236
HinfI	GANTC	7 cut(s)	152, 293, 396, 428, 629, 682, 788
HpaII	CCGG	2 cut(s)	131, 318
HphI	GGTGA	1 cut(s)	691
Hpy166II	GTNNAC	1 cut(s)	733
Hpy188III	TCNNGA	2 cut(s)	318, 492
Hpy8I	GTNNAC	1 cut(s)	733
Hpy99I	CGWCG	1 cut(s)	166
HpyAV	CCTTC	1 cut(s)	1081
HpyCH4III	ACNGT	2 cut(s)	1032, 1162
HpyCH4IV	ACGT	4 cut(s)	198, 409, 464, 954
HpyCH4V	TGCA	9 cut(s)	509, 775, 785, 803, 851, 884, 968, 1123, 1165
HpyF10VI	GCNNNNNNNGC	6 cut(s)	189, 218, 485, 602, 611, 901
HpyF3I	CTNAG	2 cut(s)	156, 763
HpySE526I	ACGT	4 cut(s)	198, 409, 464, 954
Hsp92I	GRCGYC	1 cut(s)	164
Hsp92II	CATG	6 cut(s)	42, 614, 779, 1058, 1127, 1139
HspAI	GCGC	2 cut(s)	45, 91
Kpn2I	TCCGGA	1 cut(s)	317
KspI	CCGCGG	1 cut(s)	381
Kzo9I	GATC	3 cut(s)	70, 138, 1099
LguI	GCTCTTC	1 cut(s)	2
LmnI	GCTCC	3 cut(s)	42, 180, 382
Lsp1109I	GCAGC	1 cut(s)	472
LweI	GCATC	2 cut(s)	496, 827
MaeI	CTAG	2 cut(s)	536, 872
MaeII	ACGT	4 cut(s)	198, 409, 464, 954
MaeIII	GTNAC	1 cut(s)	664
MalI	GATC	3 cut(s)	72, 140, 1101
MboI	GATC	3 cut(s)	70, 138, 1099
MboII	GAAGA	7 cut(s)	19, 264, 346, 391, 694, 758, 1016
MluCI	AATT	6 cut(s)	13, 269, 510, 709, 1040, 1115
MlyI	GAGTC	2 cut(s)	146, 390
MmeI	TCCRAC	1 cut(s)	983
MnlI	CCTC	6 cut(s)	39, 109, 151, 213, 217, 306
MroI	TCCGGA	1 cut(s)	317
MroXI	GAANNNNTTC	3 cut(s)	256, 606, 1044
MseI	TTAA	3 cut(s)	360, 440, 461
MspA1I	CMGCKG	1 cut(s)	380
MspI	CCGG	2 cut(s)	131, 318
MspR9I	CCNGG	2 cut(s)	207, 1050
Mva1269I	GAATGC	1 cut(s)	853
MvaI	CCWGG	2 cut(s)	207, 1050
MvnI	CGCG	4 cut(s)	91, 178, 380, 1002
MwoI	GCNNNNNNNGC	6 cut(s)	189, 218, 485, 602, 611, 901
NcoI	CCATGG	1 cut(s)	38
NdeII	GATC	3 cut(s)	70, 138, 1099
NlaIII	CATG	6 cut(s)	42, 614, 779, 1058, 1127, 1139
NlaIV	GGNNCC	3 cut(s)	64, 945, 1047
NmeAIII	GCCGAG	1 cut(s)	289
NmuCI	GTSAC	1 cut(s)	664
NspI	RCATGY	1 cut(s)	779
PciSI	GCTCTTC	1 cut(s)	2
PcsI	WCGNNNNNNNCGW	1 cut(s)	134
PctI	GAATGC	1 cut(s)	853
PdmI	GAANNNNTTC	3 cut(s)	256, 606, 1044
PfeI	GAWTC	5 cut(s)	293, 428, 629, 682, 788
PflFI	GACNNNGTC	1 cut(s)	1175
PflMI	CCANNNNNTGG	1 cut(s)	1141
PkrI	GCNGC	1 cut(s)	487
Ple19I	CGATCG	1 cut(s)	73
PleI	GAGTC	2 cut(s)	146, 390
PpsI	GAGTC	2 cut(s)	146, 390
Psp1406I	AACGTT	2 cut(s)	464, 954
Psp6I	CCWGG	2 cut(s)	205, 1048
PspGI	CCWGG	2 cut(s)	205, 1048
PspN4I	GGNNCC	3 cut(s)	64, 945, 1047
PspPI	GGNCC	2 cut(s)	26, 315
PsyI	GACNNNGTC	1 cut(s)	1175
PvuI	CGATCG	1 cut(s)	73
RsaI	GTAC	1 cut(s)	1133
RsaNI	GTAC	1 cut(s)	1132
SacII	CCGCGG	1 cut(s)	381
SapI	GCTCTTC	1 cut(s)	2
SaqAI	TTAA	3 cut(s)	360, 440, 461
SatI	GCNGC	1 cut(s)	486
Sau3AI	GATC	3 cut(s)	70, 138, 1099
Sau96I	GGNCC	2 cut(s)	26, 315
SchI	GAGTC	2 cut(s)	146, 390
ScrFI	CCNGG	2 cut(s)	207, 1050
SfaNI	GCATC	2 cut(s)	496, 827
Sfr303I	CCGCGG	1 cut(s)	381
SgrBI	CCGCGG	1 cut(s)	381
SinI	GGWCC	1 cut(s)	315
SmlI	CTYRAG	1 cut(s)	1023
SmoI	CTYRAG	1 cut(s)	1023
SpeI	ACTAGT	1 cut(s)	871
Sse9I	AATT	6 cut(s)	13, 269, 510, 709, 1040, 1115
SsiI	CCGC	4 cut(s)	178, 378, 380, 1000
SspMI	CTAG	2 cut(s)	536, 872
StyD4I	CCNGG	2 cut(s)	205, 1048
StyI	CCWWGG	2 cut(s)	38, 591
TaaI	ACNGT	2 cut(s)	1032, 1162
TaiI	ACGT	4 cut(s)	201, 412, 467, 957
TaqI	TCGA	4 cut(s)	137, 188, 374, 493
TasI	AATT	6 cut(s)	13, 269, 510, 709, 1040, 1115
TfiI	GAWTC	5 cut(s)	293, 428, 629, 682, 788
Tru1I	TTAA	3 cut(s)	360, 440, 461
Tru9I	TTAA	3 cut(s)	360, 440, 461
TscAI	CASTG	2 cut(s)	669, 1167
TseFI	GTSAC	1 cut(s)	664
TseI	GCWGC	1 cut(s)	485
Tsp45I	GTSAC	1 cut(s)	664
TspDTI	ATGAA	8 cut(s)	347, 420, 425, 459, 599, 607, 642, 767
TspGWI	ACGGA	1 cut(s)	265
TspRI	CASTG	2 cut(s)	669, 1167
Tth111I	GACNNNGTC	1 cut(s)	1175
Van91I	CCANNNNNTGG	1 cut(s)	1141
VpaK11BI	GGWCC	1 cut(s)	315
XceI	RCATGY	1 cut(s)	779
XmnI	GAANNNNTTC	3 cut(s)	256, 606, 1044
XspI	CTAG	2 cut(s)	536, 872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.