Rorug03G0176200

disease resistance RPP13-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001713
Physical Location & Seq
Reverse (-)
14941422 .. 14948756
7335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0176200.1

Sequence Viewer

Length: 4404 bp
ATGTTTAGGATACACAGGAACAGGCCGGCGAAGTCAGGCGAGAGAATCGATTTCAAGTTCTCTCAGTTCAAAGCCGTTCAGGTGCCGAGAGGATGGGACAAGCTGTATGTGTCCATTGTGTCTGTGGAAACTGGGAAGCCAATTGCTAAGTCGAGCAAAGCGGCGGTGCGGAATGGGAGCTGTCAATGGAGTGAGGCGCTTTCCGAGTCTATATGGATTTCGCAGGATGATTCTTCCAAGGAGATGGAAGATTCTTTATTCAAGCTGGTGGTTGCCATGGGATCGGCTAGATCTGGAATCCTTGGAGAGGCTACAGTCAATATGTCGGATTATATAACTTCAAGTTCTACTGCTCCAGTTTCGCTTCCATTGAAAAAGTGCAACTATGGGACAGTTTTACAGGTGAAAATTAACTGCCTAAAGCCAAGAGCAAGGGTCAGGGATGAAGAGTCAAAAGAGACAAGCAGTCATTTGGAAGAACAAAATGGAACTGGTAATGATGTGGATGGCAAATCAGATGGATCCGGTAGTACATTTGGAAGGAGTCTCGGATCTTCCTCCACAAAAGATTTTGGCTTGACCTCAAATCCTGGAGAACCTGGAAGTAGGGGAAGTAGTTTCTCTGCTGCAGGTTCACATTGCAGCTATGAGTCAGCAGGGGGTTCCATAAGAAGGGATCCTATTCTTCTAGGAAGCAACCTTACTGGTGAAGGGAACCTCCTGATTGGAAGACAAGATTCAACCAGCTCTCAAACTAGTTCAATGCCTGGCAATTTTCCAGCCATTTCTTCTCCATCCAATCATTCATCATTTAACTCCAGGATCACAGGTGCGGGAAATCATTCTCAGAATTCTCGCAGAGATATTCCAGAATCACCTTTAAGAACCACTAGTTCTTCTAAAAACCTTCTGGAAACCGCAGAAGTTACTATTGAGGAGCTACATGCAGAAGCTAAGATGTGGGAGAGGAATGCACGGAAACTAATGCTTGATCTGGATATACTGAGGACAGAATTTTCTGATCAGTCAAAAAAGCAGGCAAATTTGAATATGGAGCTTTCAGCCGCATATGCTGAACGTGATAGCTTGAAGAAAGAAGTTGAACACTTAAAAGTGTCATTTGAGAGTTCAGTGATGAGACAAACAGCCAGCGAGGATTTATCTCAAGGTGGAGTGTCTCATATAGAGAAGGCATTACAAGATGAACTGAAGTTTCAAAAAGAATCCATTGCCAATCTGGACCTGCAGTTGAAAAGGAGCCAAGAATCAAATATTGAGCTGGTTTCCGTTCTCCAGGAGCTGGAAGAGACAATTGAAGAACAAAAGATGGAGTTAGAGAATCTATCAGAACTACAATCAAAACTTATTGAAATGGAAAATTCAATCCAAATAACTACAGAGGAGAACAGCAATCTAACGCGTCAACTGCAAAAATTGCAGGAATCAGAGAACAAGTTGCAAGATATGGTGCAGCAGCTGGAACAGGCTCTGGAAGAGAAAAACCGCGATGTAGAGAAGGGGTCGGGTCTGGAAAAACGAAGCCTTTCGGATATTGAGACAGAATACAGCAGTACATTATTCGATAAAGAAGAAGAGATTATTCAATTGAGAGAAAAGCTGTCTGAGTCTCTCAAAGAAAGCCATTCTGCAGAAATAAGGTCTATTACCATGAATGGAGGTGAAACAGATCTGATCAGACAAATTGAAGTCTTGAAAGAAAAGTTGCAGGAGCTAGAGACAGATTGTAATGAGCTGACGGATGAAAACCTTGAACTCTTATTCAAGCTTAAGGAAGCAAAGAACAATTCTGCAGGGGGACATGCACCTGTTGATCTTCCCACCACTGAGCTTTTGGTGGATTCTTTTAACAGCTTTGAGTCCAAAGTGGCTGAACGGAAATCCCACATACAAAATGCAGAGGAGAATTGCAATAAGATGGTGCTTGGGGAGATTACGAATAATCATGATCTTTCAATTCAAGTGCTTGAGAGTTTAAAAATGGAACTTGAAATTAAAGTCACAGATCTGGGGAAAGAATTGACAGAGAAAAGGTCTGAGATAGCCAAACTGGAGGATAACTTGCTAACCAAAGAAGAAGAAACCAGGGCTCTACGACAGGTGCACAATGAATTAGAGGCTCAGTTTTCCAATCTACAAAGGGAAAAAGTCGAGCTAGAAGAACACATGGAAATTGTGCTAAGAGAAAGTGAGCTCACCACCAAGTGTTTGAATGATTTGCGAAATGATCTAGTGGTGCTCAGCAGCAATGTGGATTCGCATGTTTCTACCAATAAGATACTTGAAAAGAAATCTTCAGAGCTTGAAGCTGATAAATATGAACTGGAATTTCACTTGTCTGAGCTTGAACAACAAAACAGACAATTATCAGAACGTATTTCTGCTCTAGAAGCTCAGCTAAGATGTTTGACAGATGAAAAGGAGGCTAATCAATTAGAACTAGAGAATTCCAAATCTTATTCTCTAAAGCTCCAAGATGAAATCAGCAGCTTAAAAGTTGAGATGGAATCTGATAAAGTTGAACTGAAACAGAAATTACAGGAATTGCAAAGTCAGTGGTCAGAAGCTCGAGAAGAATGTGAATTTCTTAGAAGGGCAAATCCAAAGTTACAAGCTACTGTGGAGACCCTCATTGAAGAGTGCAATTCGCTTGAGAAATCAAATGAGGAGCTGAAAACACAAAAGCTGGAGTTGCATGAGCAATGTACCTACTTGGAGGCAAGGTTGACTGAATCTCACAAGCGCTTTACAGATTGCTCGAAAATAGTTGAAGTGTTGGAACAAGATCTATCTTTGATGATGGAAAGCATTGCCTCAAAAGAGAAAATCCTAAATTCGGAATTAGATGCACTTCGTGATGAAACCATCCAACATAAGGAGAAACTTATTTCGGAAGAGAGCTTGTTGAATAAGATGTATTTGGAGAAGGCAGTGGAAGTTGAGAACCTTCAGCAAGAGGTAGAACGACTCAACAAGCAACTTTCTGAGACTCATAAAGAAAGCGAAGAACTAGCTTCAGGTGCTTTCCACGAAGCATCCAGATTACGAGCTGAGAAGGTAGATCTTGAGTCTGCTCTGCTAGAGGTTCAATCTAGAGCGATACAGACTGAGAATGAACTCAATATTATGAGAGCAGAATATGAAGAGAAGCTACAAGGCCTATCAGTTGATCTTGCTGCTTCTAAACAAATCCAGGAAACAATGATGGCTGACCATGAAAGGCTATTGAAGTTGTTGGAGAATTACAAGTCAAGTGAAGCAAAATTGAAGACCACTGTGAACAATCTGGAACTAAAACTTACAGTTTCTGATTATGAACAGCAACAGCTGGTGGAAGAATCTACCAATCTGAAGGTTCAACTGCAGAATTTAACTCATTGTCAGGATGAAATGTTGGCTGTTAAGAATGAGCTTGATGCGACTAAGCTTGAGAAAGAGAAATTGGAATCACTACTGGATACTCAACTACAGAATTTAACTCATTGTCAGGATGAAGTGTTGGCTATAAAGAATGAGCTTGACGCGATCAAGCTTGAGAAAGAGAAATTGGAAGCACTGCTGGATTCCGTGTCTGAGGAATATGAATATCTGAAGGCAGAGAAGAATTCATTCCTCGAGAAGATTTCAACATTGGATATGGTCTTATCTGAATTGGAGGATTGCAAACATAATAAAGCTGTCTTGGAGAGGAAAGTTCTGCGGATGGAAGGTGATCTAATTGCGAAAGAGGCTTTATTTGCACAAGATGCTGAGCTGAAGAATGAGCTCAACCAGTTCAGAAGAGCCAACGAGCAGTATCAACAAAAACTACAGCTACTCGAGGAGGAGAAAGATGAGTGCCTAAGAAGATCTCAGTCCCTTGAACAAGAATTGAAACTAATTAGGGAAGAAAAACAGAACCAGAGGGATCTAAAGTCAAGAAGCAGTGCCAAAGTCACTGAAGATAAGAAGCTCTCAAAAAATGAAATGGTGAAGAACAGCAGTCATCGTCGTGATAATAGAAGGAAGCCCCTAGTGAAGAATGGTCAGGATGATAATGGAATTGACAGCCATGATGCAAGTCCTCGTGATATTGGAGTTGACTCTGGTTTGAAGATTAAGATGCTTGAGGATGAACTTGTTAAGGCATTGGAAGCAAATAACACTTATAAACTTCAACTTGATAGGCTAACCCGAAACAACCATGCGGATGCTCATCAAAATTCAAGAGCTGAAGTAGTGGCAAAAGATAGATTTGAACGCTCGAAATCATCTCTAGAGACAGAATTGAAAGAGATTCGTGAGCGCTACTTGAACATGAGCCTGAGATATGCAGAGGTAGAAGCTGAGCGTGAGGAACTAGTGATGAAGCTCAAGCAATCCAAGAGTGGAAAAAGGTGGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1467

Amino Acids

167.18

Weight (kDa)

5.02

Isoelectric Point (pI)

54.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 28 - 140 4.4e-12 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4167
Acc36I ACCTGC 2 cut(s) 620, 1251
AccB1I GGYRCC 1 cut(s) 82
AccB7I CCANNNNNTGG 1 cut(s) 1300
AccII CGCG 3 cut(s) 1420, 1506, 3542
AciI CCGC 9 cut(s) 161, 164, 169, 833, 918, 1065, 1504, 3718, 4205
AclWI GGATC 8 cut(s) 289, 516, 529, 559, 671, 684, 830, 3933
AcuI CTGAAG 9 cut(s) 1229, 2298, 2951, 3018, 3389, 3629, 3794, 3978, 4251
AdeI CACNNNGTG 2 cut(s) 2223, 2873
AfaI GTAC 3 cut(s) 532, 1573, 2725
AfeI AGCGCT 2 cut(s) 2762, 4304
AfiI CCNNNNNNNGG 5 cut(s) 307, 672, 1300, 2854, 2893
AflII CTTAAG 1 cut(s) 1787
AflIII ACRYGT 1 cut(s) 1418
AhdI GACNNNNNGTC 1 cut(s) 465
AhlI ACTAGT 3 cut(s) 755, 890, 4357
AjnI CCWGG 7 cut(s) 589, 598, 766, 818, 1293, 2102, 3210
AjuI GAANNNNNNNTTGG 4 cut(s) 3443, 3475, 3548, 3580
Alw21I GWGCWC 4 cut(s) 2124, 2214, 2259, 3786
Alw44I GTGCAC 1 cut(s) 2120
AlwI GGATC 8 cut(s) 289, 516, 529, 559, 671, 684, 830, 3933
AlwNI CAGNNNCTG 4 cut(s) 1300, 1477, 1489, 3326
Ama87I CYCGRG 3 cut(s) 2586, 3632, 3836
Aor51HI AGCGCT 2 cut(s) 2762, 4304
AoxI GGCC 2 cut(s) 23, 3175
ApaLI GTGCAC 1 cut(s) 2120
ApeKI GCWGC 7 cut(s) 626, 642, 1471, 1474, 2262, 2505, 3194
Asp700I GAANNNNTTC 3 cut(s) 841, 1543, 3626
AspLEI GCGC 3 cut(s) 199, 2763, 4305
AspS9I GGNCC 1 cut(s) 1240
AsuHPI GGTGA 7 cut(s) 415, 719, 867, 1691, 2206, 3740, 4000
AvaI CYCGRG 3 cut(s) 2586, 3632, 3836
AvaII GGWCC 1 cut(s) 1240
BaeGI GKGCMC 1 cut(s) 2124
BamHI GGATCC 2 cut(s) 521, 676
BanI GGYRCC 1 cut(s) 82
BanII GRGCYC 3 cut(s) 2110, 2214, 3786
BarI GAAGNNNNNNTAC 4 cut(s) 685, 717, 3153, 3185
BauI CACGAG 1 cut(s) 4083
BbsI GAAGAC 2 cut(s) 736, 3293
Bbv12I GWGCWC 4 cut(s) 2124, 2214, 2259, 3786
BbvI GCAGC 7 cut(s) 613, 654, 1483, 1486, 2274, 2517, 3181
BceAI ACGGC 1 cut(s) 59
BciT130I CCWGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
BciVI GTATCC 2 cut(s) 3, 3469
BclI TGATCA 2 cut(s) 1021, 1692
BcuI ACTAGT 3 cut(s) 755, 890, 4357
BfmI CTRYAG 9 cut(s) 312, 627, 1244, 1395, 1647, 1809, 3380, 3485, 3827
BfoI RGCGCY 3 cut(s) 200, 2764, 4306
BfrI CTTAAG 1 cut(s) 1787
BfuAI ACCTGC 2 cut(s) 620, 1251
BfuI GTATCC 2 cut(s) 3, 3469
BglII AGATCT 6 cut(s) 290, 1687, 2023, 2803, 3079, 3866
BisI GCNGC 9 cut(s) 162, 627, 643, 1065, 1472, 1475, 2263, 2506, 3195
BlpI GCTNAGC 4 cut(s) 2258, 2412, 3768, 4344
BlsI GCNGC 9 cut(s) 163, 628, 644, 1066, 1473, 1476, 2264, 2507, 3196
Bme1390I CCNGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
Bme18I GGWCC 1 cut(s) 1240
BmeRI GACNNNNNGTC 1 cut(s) 465
BmeT110I CYCGRG 3 cut(s) 2586, 3632, 3836
BmgT120I GGNCC 1 cut(s) 1240
BmiI GGNNCC 6 cut(s) 84, 523, 664, 678, 716, 1259
BmrFI CCNGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
BmrI ACTGGG 1 cut(s) 141
BmsI GCATC 7 cut(s) 2854, 3062, 3424, 3754, 4063, 4110, 4198
BmuI ACTGGG 1 cut(s) 141
BpiI GAAGAC 2 cut(s) 736, 3293
BpmI CTGGAG 6 cut(s) 339, 612, 802, 1277, 2090, 2726
Bpu1102I GCTNAGC 4 cut(s) 2258, 2412, 3768, 4344
BpuEI CTTGAG 8 cut(s) 1149, 2006, 2690, 3104, 3467, 3572, 4145, 4355
Bsa29I ATCGAT 1 cut(s) 48
BsaBI GATNNNNATC 1 cut(s) 4212
BsaI GGTCTC 1 cut(s) 2636
BsaJI CCNNGG 4 cut(s) 237, 276, 301, 2103
BsaWI WCCGGW 1 cut(s) 524
BsaXI ACNNNNNCTCC 2 cut(s) 2726, 2756
Bsc4I CCNNNNNNNGG 5 cut(s) 307, 672, 1300, 2854, 2893
Bse118I RCCGGY 1 cut(s) 25
Bse1I ACTGG 8 cut(s) 136, 356, 496, 709, 2073, 2346, 3477, 3790
Bse3DI GCAATG 5 cut(s) 637, 1227, 2272, 2726, 2826
Bse8I GATNNNNATC 1 cut(s) 4212
BseBI CCWGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
BseCI ATCGAT 1 cut(s) 48
BseDI CCNNGG 4 cut(s) 237, 276, 301, 2103
BseJI GATNNNNATC 1 cut(s) 4212
BseLI CCNNNNNNNGG 5 cut(s) 307, 672, 1300, 2854, 2893
BseMI GCAATG 5 cut(s) 637, 1227, 2272, 2726, 2826
BseNI ACTGG 8 cut(s) 136, 356, 496, 709, 2073, 2346, 3477, 3790
BseRI GAGGAG 6 cut(s) 950, 1415, 1934, 2699, 3854, 3857
BseSI GKGCMC 1 cut(s) 2124
BseXI GCAGC 7 cut(s) 613, 654, 1483, 1486, 2274, 2517, 3181
BsgI GTGCAG 1 cut(s) 1490
Bsh1236I CGCG 3 cut(s) 1420, 1506, 3542
BshFI GGCC 2 cut(s) 25, 3177
BshNI GGYRCC 1 cut(s) 82
BshVI ATCGAT 1 cut(s) 48
BsiHKAI GWGCWC 4 cut(s) 2124, 2214, 2259, 3786
BsiHKCI CYCGRG 3 cut(s) 2586, 3632, 3836
BsiSI CCGG 2 cut(s) 26, 525
BslFI GGGAC 4 cut(s) 110, 403, 1830, 3859
BslI CCNNNNNNNGG 5 cut(s) 307, 672, 1300, 2854, 2893
BsmFI GGGAC 4 cut(s) 110, 403, 1830, 3859
BsmI GAATGC 1 cut(s) 976
BsnI GGCC 2 cut(s) 25, 3177
Bso31I GGTCTC 1 cut(s) 2636
BsoBI CYCGRG 3 cut(s) 2586, 3632, 3836
Bsp1286I GDGCHC 5 cut(s) 2110, 2124, 2214, 2259, 3786
Bsp1720I GCTNAGC 4 cut(s) 2258, 2412, 3768, 4344
Bsp19I CCATGG 1 cut(s) 276
BspACI CCGC 9 cut(s) 161, 164, 169, 833, 918, 1065, 1504, 3718, 4205
BspANI GGCC 2 cut(s) 25, 3177
BspDI ATCGAT 1 cut(s) 48
BspFNI CGCG 3 cut(s) 1420, 1506, 3542
BspHI TCATGA 1 cut(s) 1963
BspLI GGNNCC 6 cut(s) 84, 523, 664, 678, 716, 1259
BspMAI CTGCAG 5 cut(s) 631, 1248, 1651, 1813, 3384
BspMI ACCTGC 2 cut(s) 620, 1251
BspPI GGATC 8 cut(s) 289, 516, 529, 559, 671, 684, 830, 3933
BspQI GCTCTTC 1 cut(s) 3793
BspT107I GGYRCC 1 cut(s) 82
BspTI CTTAAG 1 cut(s) 1787
BspTNI GGTCTC 1 cut(s) 2636
BsrDI GCAATG 5 cut(s) 637, 1227, 2272, 2726, 2826
BsrFI RCCGGY 1 cut(s) 25
BsrI ACTGG 8 cut(s) 136, 356, 496, 709, 2073, 2346, 3477, 3790
BssAI RCCGGY 1 cut(s) 25
BssECI CCNNGG 4 cut(s) 237, 276, 301, 2103
BssSI CACGAG 1 cut(s) 4083
BssT1I CCWWGG 3 cut(s) 237, 276, 301
Bst2BI CACGAG 1 cut(s) 4083
Bst2UI CCWGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
Bst4CI ACNGT 5 cut(s) 316, 394, 2638, 3295, 3322
Bst6I CTCTTC 8 cut(s) 441, 1299, 1488, 1587, 2649, 2907, 3156, 3793
BstAFI CTTAAG 1 cut(s) 1787
BstAPI GCANNNNNTGC 2 cut(s) 1435, 3764
BstC8I GCNNGC 3 cut(s) 27, 1038, 1150
BstDSI CCRYGG 1 cut(s) 276
BstENI CCTNNNNNAGG 1 cut(s) 305
BstFNI CGCG 3 cut(s) 1420, 1506, 3542
BstH2I RGCGCY 3 cut(s) 200, 2764, 4306
BstHHI GCGC 3 cut(s) 199, 2763, 4305
BstNI CCWGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
BstNSI RCATGY 3 cut(s) 947, 1823, 2282
BstSCI CCNGG 7 cut(s) 589, 598, 766, 818, 1293, 2102, 3210
BstSFI CTRYAG 9 cut(s) 312, 627, 1244, 1395, 1647, 1809, 3380, 3485, 3827
BstSLI GKGCMC 1 cut(s) 2124
BstUI CGCG 3 cut(s) 1420, 1506, 3542
BstV1I GCAGC 7 cut(s) 613, 654, 1483, 1486, 2274, 2517, 3181
BstV2I GAAGAC 2 cut(s) 736, 3293
BstXI CCANNNNNNTGG 1 cut(s) 244
Bsu15I ATCGAT 1 cut(s) 48
BsuI GTATCC 2 cut(s) 3, 3469
BsuRI GGCC 2 cut(s) 25, 3177
BsuTUI ATCGAT 1 cut(s) 48
BtgI CCRYGG 1 cut(s) 276
BtgZI GCGATG 1 cut(s) 1521
BtsI GCAGTG 3 cut(s) 2955, 3572, 3949
BtsIMutI CAGTG 8 cut(s) 1137, 1842, 2579, 2955, 3291, 3572, 3949, 3954
BveI ACCTGC 2 cut(s) 620, 1251
Cac8I GCNNGC 3 cut(s) 27, 1038, 1150
CaiI CAGNNNCTG 4 cut(s) 1300, 1477, 1489, 3326
CciI TCATGA 1 cut(s) 1963
CfoI GCGC 3 cut(s) 199, 2763, 4305
Cfr10I RCCGGY 1 cut(s) 25
Cfr13I GGNCC 1 cut(s) 1240
ClaI ATCGAT 1 cut(s) 48
CseI GACGC 2 cut(s) 1409, 3548
Csp6I GTAC 3 cut(s) 531, 1572, 2724
CspCI CAANNNNNGTGG 2 cut(s) 2555, 2590
CviQI GTAC 3 cut(s) 531, 1572, 2724
DraI TTTAAA 1 cut(s) 1995
DraIII CACNNNGTG 2 cut(s) 2223, 2873
DriI GACNNNNNGTC 1 cut(s) 465
Eam1104I CTCTTC 8 cut(s) 441, 1299, 1488, 1587, 2649, 2907, 3156, 3793
Eam1105I GACNNNNNGTC 1 cut(s) 465
EarI CTCTTC 8 cut(s) 441, 1299, 1488, 1587, 2649, 2907, 3156, 3793
Ecl136II GAGCTC 2 cut(s) 2212, 3784
Eco130I CCWWGG 3 cut(s) 237, 276, 301
Eco147I AGGCCT 1 cut(s) 3177
Eco24I GRGCYC 3 cut(s) 2110, 2214, 3786
Eco31I GGTCTC 1 cut(s) 2636
Eco47I GGWCC 1 cut(s) 1240
Eco47III AGCGCT 2 cut(s) 2762, 4304
Eco53kI GAGCTC 2 cut(s) 2212, 3784
Eco57I CTGAAG 9 cut(s) 1229, 2298, 2951, 3018, 3389, 3629, 3794, 3978, 4251
Eco88I CYCGRG 3 cut(s) 2586, 3632, 3836
EcoICRI GAGCTC 2 cut(s) 2212, 3784
EcoNI CCTNNNNNAGG 1 cut(s) 305
EcoRI GAATTC 3 cut(s) 850, 2464, 3622
EcoRII CCWGG 7 cut(s) 589, 598, 766, 818, 1293, 2102, 3210
EcoT14I CCWWGG 3 cut(s) 237, 276, 301
EcoT38I GRGCYC 3 cut(s) 2110, 2214, 3786
ErhI CCWWGG 3 cut(s) 237, 276, 301
FaqI GGGAC 4 cut(s) 110, 403, 1830, 3859
FauI CCCGC 1 cut(s) 826
FauNDI CATATG 1 cut(s) 1069
FbaI TGATCA 2 cut(s) 1021, 1692
Fnu4HI GCNGC 9 cut(s) 162, 627, 643, 1065, 1472, 1475, 2263, 2506, 3195
FriOI GRGCYC 3 cut(s) 2110, 2214, 3786
Fsp4HI GCNGC 9 cut(s) 162, 627, 643, 1065, 1472, 1475, 2263, 2506, 3195
GlaI GCGC 3 cut(s) 198, 2762, 4304
GluI GCNGC 9 cut(s) 162, 627, 643, 1065, 1472, 1475, 2263, 2506, 3195
GsuI CTGGAG 6 cut(s) 339, 612, 802, 1277, 2090, 2726
HaeII RGCGCY 3 cut(s) 200, 2764, 4306
HaeIII GGCC 2 cut(s) 25, 3177
HapII CCGG 2 cut(s) 26, 525
HgaI GACGC 2 cut(s) 1409, 3548
HhaI GCGC 3 cut(s) 199, 2763, 4305
Hin6I GCGC 3 cut(s) 197, 2761, 4303
HinP1I GCGC 3 cut(s) 197, 2761, 4303
HincII GTYRAC 3 cut(s) 1424, 2745, 4099
HindII GTYRAC 3 cut(s) 1424, 2745, 4099
HindIII AAGCTT 3 cut(s) 1784, 3443, 3548
HpaII CCGG 2 cut(s) 26, 525
HphI GGTGA 7 cut(s) 415, 719, 867, 1691, 2206, 3740, 4000
Hpy166II GTNNAC 6 cut(s) 635, 1424, 2122, 2745, 3298, 4099
Hpy8I GTNNAC 6 cut(s) 635, 1424, 2122, 2745, 3298, 4099
Hpy99I CGWCG 1 cut(s) 4011
HpyCH4III ACNGT 5 cut(s) 316, 394, 2638, 3295, 3322
HpyCH4IV ACGT 2 cut(s) 1078, 2392
HpySE526I ACGT 2 cut(s) 1078, 2392
HspAI GCGC 3 cut(s) 197, 2761, 4303
KroI GCCGGC 1 cut(s) 25
KroNI GCCGGC 1 cut(s) 27
Ksp22I TGATCA 2 cut(s) 1021, 1692
LguI GCTCTTC 1 cut(s) 3793
LmnI GCTCC 9 cut(s) 177, 358, 937, 1054, 1257, 1297, 1729, 2493, 2686
Lsp1109I GCAGC 7 cut(s) 613, 654, 1483, 1486, 2274, 2517, 3181
LweI GCATC 7 cut(s) 2854, 3062, 3424, 3754, 4063, 4110, 4198
MaeII ACGT 2 cut(s) 1078, 2392
MaeIII GTNAC 4 cut(s) 925, 2017, 2625, 3952
MfeI CAATTG 3 cut(s) 141, 1311, 1604
MhlI GDGCHC 5 cut(s) 2110, 2124, 2214, 2259, 3786
MluI ACGCGT 1 cut(s) 1418
MmeI TCCRAC 4 cut(s) 306, 2775, 2911, 3234
MroNI GCCGGC 1 cut(s) 25
MroXI GAANNNNTTC 3 cut(s) 841, 1543, 3626
MslI CAYNNNNRTG 2 cut(s) 4008, 4206
MspA1I CMGCKG 2 cut(s) 1477, 3346
MspCI CTTAAG 1 cut(s) 1787
MspI CCGG 2 cut(s) 26, 525
MspR9I CCNGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
MunI CAATTG 3 cut(s) 141, 1311, 1604
Mva1269I GAATGC 1 cut(s) 976
MvaI CCWGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
MvnI CGCG 3 cut(s) 1420, 1506, 3542
NaeI GCCGGC 1 cut(s) 27
NcoI CCATGG 1 cut(s) 276
NdeI CATATG 1 cut(s) 1069
NgoMIV GCCGGC 1 cut(s) 25
NlaIV GGNNCC 6 cut(s) 84, 523, 664, 678, 716, 1259
NmeAIII GCCGAG 1 cut(s) 111
NmuCI GTSAC 2 cut(s) 2017, 3952
NspI RCATGY 3 cut(s) 947, 1823, 2282
PaeR7I CTCGAG 3 cut(s) 2586, 3632, 3836
PagI TCATGA 1 cut(s) 1963
PceI AGGCCT 1 cut(s) 3177
PciSI GCTCTTC 1 cut(s) 3793
PctI GAATGC 1 cut(s) 976
PdiI GCCGGC 1 cut(s) 27
PdmI GAANNNNTTC 3 cut(s) 841, 1543, 3626
PflMI CCANNNNNTGG 1 cut(s) 1300
PfoI TCCNGGA 4 cut(s) 589, 818, 1293, 3210
PkrI GCNGC 9 cut(s) 163, 628, 644, 1066, 1473, 1476, 2264, 2507, 3196
PsiI TTATAA 1 cut(s) 4167
Psp124BI GAGCTC 2 cut(s) 2214, 3786
Psp6I CCWGG 7 cut(s) 589, 598, 766, 818, 1293, 2102, 3210
PspGI CCWGG 7 cut(s) 589, 598, 766, 818, 1293, 2102, 3210
PspN4I GGNNCC 6 cut(s) 84, 523, 664, 678, 716, 1259
PspPI GGNCC 1 cut(s) 1240
PspXI VCTCGAGB 1 cut(s) 3836
PstI CTGCAG 5 cut(s) 631, 1248, 1651, 1813, 3384
PstNI CAGNNNCTG 4 cut(s) 1300, 1477, 1489, 3326
PvuII CAGCTG 2 cut(s) 1477, 3346
RsaI GTAC 3 cut(s) 532, 1573, 2725
RsaNI GTAC 3 cut(s) 531, 1572, 2724
RseI CAYNNNNRTG 2 cut(s) 4008, 4206
SacI GAGCTC 2 cut(s) 2214, 3786
SapI GCTCTTC 1 cut(s) 3793
SatI GCNGC 9 cut(s) 162, 627, 643, 1065, 1472, 1475, 2263, 2506, 3195
Sau96I GGNCC 1 cut(s) 1240
ScrFI CCNGG 7 cut(s) 591, 600, 768, 820, 1295, 2104, 3212
SduI GDGCHC 5 cut(s) 2110, 2124, 2214, 2259, 3786
SfaNI GCATC 7 cut(s) 2854, 3062, 3424, 3754, 4063, 4110, 4198
SfcI CTRYAG 9 cut(s) 312, 627, 1244, 1395, 1647, 1809, 3380, 3485, 3827
Sfr274I CTCGAG 3 cut(s) 2586, 3632, 3836
SinI GGWCC 1 cut(s) 1240
SlaI CTCGAG 3 cut(s) 2586, 3632, 3836
SmiMI CAYNNNNRTG 2 cut(s) 4008, 4206
SpeI ACTAGT 3 cut(s) 755, 890, 4357
SseBI AGGCCT 1 cut(s) 3177
SsiI CCGC 9 cut(s) 161, 164, 169, 833, 918, 1065, 1504, 3718, 4205
SspI AATATT 2 cut(s) 1273, 3142
SstI GAGCTC 2 cut(s) 2214, 3786
StuI AGGCCT 1 cut(s) 3177
StyD4I CCNGG 7 cut(s) 589, 598, 766, 818, 1293, 2102, 3210
StyI CCWWGG 3 cut(s) 237, 276, 301
TaaI ACNGT 5 cut(s) 316, 394, 2638, 3295, 3322
TaiI ACGT 2 cut(s) 1081, 2395
TaqI TCGA 9 cut(s) 48, 152, 1581, 2169, 2587, 2777, 3633, 3837, 4262
TatI WGTACW 2 cut(s) 530, 1571
TauI GCSGC 2 cut(s) 164, 1067
TscAI CASTG 8 cut(s) 1137, 1849, 2579, 2955, 3298, 3579, 3949, 3961
TseFI GTSAC 2 cut(s) 2017, 3952
TseI GCWGC 7 cut(s) 626, 642, 1471, 1474, 2262, 2505, 3194
Tsp45I GTSAC 2 cut(s) 2017, 3952
TspGWI ACGGA 5 cut(s) 991, 1276, 1772, 1909, 3574
TspRI CASTG 8 cut(s) 1137, 1849, 2579, 2955, 3298, 3579, 3949, 3961
Van91I CCANNNNNTGG 1 cut(s) 1300
Vha464I CTTAAG 1 cut(s) 1787
VneI GTGCAC 1 cut(s) 2120
VpaK11BI GGWCC 1 cut(s) 1240
XagI CCTNNNNNAGG 1 cut(s) 305
XbaI TCTAGA 3 cut(s) 2404, 3110, 4273
XceI RCATGY 3 cut(s) 947, 1823, 2282
XcmI CCANNNNNNNNNTGG 3 cut(s) 121, 1234, 1849
XhoI CTCGAG 3 cut(s) 2586, 3632, 3836
XmnI GAANNNNTTC 3 cut(s) 841, 1543, 3626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.