Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001713

Physical Location & Seq

Genomic Coordinates Forward (+)

15849318 .. 15852653

Gene Structure 3336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g22160.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGAAGTCTTCGTCTAGTCTCAAATCCAATTCAAACTTGGAAAAAATCTTGACCATTGAGGATGTCAGAGAAACCCACATTCCCTCACTCCTCAATAGCCTCTCCGAGGCCAAGCGTTACCTTTCTGAGACCCACGCAGACAACAATGAGGCAGGGAAAATTTCCACTGAAATTGAAAAGCTTCGTAAAGACCTCATTTTCATCAAGCAAGTTTTCACTGGACTGGACACTTTGGGAAAAAGCACAAGTGATCTTTTCAAGGTTCTCCTCGAGCACAGCCTAGACCCGCTTTTGGAGCGAGGAACGCAGACTCGCTACCACGAGTCGCTTGAAAAGCAATTCAAGCCAAAGCTTGGAGTGCTTGCTGAGGTTATCATCAAACTGAAGCTCCTACTTCCATCACCGCACAAACTGTTGTTGGATAGGTCCAATCCTTTTCTACTGTCCAGCATTCATTTGGGTGCAGGCAATCGTCTCAATCAATTGCTTGGCTTACACGCAAGTGAGGTGTTCTATAATAGCCAGGCTTTTAATGAGTTCCAGAATGTTTATAACAGTCTTGGTACTGTTACTACAAAGCTGTGCTTGCTGTGTTTCGCTGTGTTTCCGGCTAATGAGGTTCTAAAGAAGAAGCGTCTGGTACATTGGTGGGTCGGAGAAGGCATCCTCTACCCTCCGGTGGAGGAAATTGCTGATGGAATATTTGAGGAGTTAACAACTAAGGGCTGCATTGAACCGGTCAGGAAAAAGAGGAGATCAGACCCGCATAGTTTTAAATTGCACCCTCTAATTCGTTCAGCAGTGATTCGGATGGCCAAAGAAGTCGGATTCTTACAATTTGATGACAAAGGGAGACCAACAACTGAGTTCTCAAGCTCTTATCGGGCTTGTCTTGTGAGTGGTTGTCGTCATCTGGAATTGGTAACTAAAACCGATATGGAATTAGAAAAACTGCAGACTATATTCAATGTGAACGAGTCTTATCCAAATTTTTCCAAAGTGGAATGGTCCAGGTTGAAGAATGTGAAGGTTCTTTATCTTGGAAGGTGGCACAGCAGGGCTAAACATCACATTGAAGTAGTCGACATCGATTTCTTGAAAGGGTTGATGTTTATGACACGTTTGAGGTTTCTCAGCCTCCGAGGAATATCAGGGATCATGGAGCTACCTGATTCATTATGCAAGCTTGTTTGTTTGGAAATCTTGGATCTTGGAGCATGTCACAATCTAGAGGTGCTTCCGGAGAAAATAAGCTCGCTTAAGAAGCTCACACACTTGGACATGTCCGAGTGTTACTTGCTGGATCGTATGCCTAAGGGGATCGCATCGCTCTCAGAACTTGAAGTTCTTAAAGGGTTCATAATTGGTGATCACAGGCATAACACTTCGTGTACTCTGCATGATTTGTCAGAATTGCAAAAGTTGAAAAAATTGACAATCAACACAAGCAGGGAGGATTTTCCCAAGGAAGAAGAGCTAACTGTCTTGCAAGGATTTGGTTCACTTCTAAAGCTAACAATAGCATGGGGAGGAGTAGACTTCCTTGCTAACCGCCAGGAGAAGCATAGTAAGCAACACAGAGTTGGAGCACAACCTAAAACAAGCACGACAGATGCCAGAGGGGGTATCAGAAAAGAAGATCATGCTAATGGTGTTCAAAATGATGTGCGCAGAATTCCGGCAAGGTTAGTAACCTCGAGGCGAGGGGCTACTCAGGAACATTTCAAAGTACTTGAGAAACTGGACTTGCAATGCTACCCTCATATGAAAGCACCAAGTTGGTTGGCGCCTGGAAAGCTCGAGAAGCTGAAGAAACTCTACGTTAGAGGGGGACAGCTCCAAAGTCTAGGTCAAGTTCAGGAGAGTGAGAAGTGGACAGTTGAGATGTTGCGTCTGAAGTTCTTGAGTGAACTAAAGTTAGATTGGAATGAACTCCAGGCAGCATTTCCAAAATTGAATTATGTGGAGAAATTTAGATGCCCTAAGACCACTTTCTTCCCCTGCAATGAGAATGGAATCTGGCTGAAAACTGAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

680

Amino Acids

77.54

Weight (kDa)

9.12

Isoelectric Point (pI)

41.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	201 - 265	5.5e-06	Disease resistance protein Winged helix domain
LRR_14	PF23598	335 - 505	1.3e-19	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45520 AT5G45520
fragaria_vesca	FvH4_6g22160 FvH4_6g22160
malus_domestica	MD10G1305300.v1.1 MD12G1056400.v1.1
prunus_persica	Prupe.4G034300_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078600_v2.0.a1
pyrus_communis	pycom10g25780 pycom12g04920
rosa_chinensis	RchiOBHm_Chr3g0479511 RchiOBHm_Chr5g0005761
rosa_laevigata	RLG00000023563
rosa_multiflora	Rmu_sc0004732.1_g000003 Rmu_sc0010248.1_g000001 Rmu_sc0014513.1_g000002
rosa_roxburghii	Rroxscaffold_1G00070100 Rroxscaffold_6G00402180
rosa_rugosa	Rorug03G0175900 Rorug03G0176000 Rorug03G0176100 Rorug03G0176200 Rorug04G0417900
rosa_samantha	Rh3AG226900 Rh3BG260000 Rh3CG234800 Rh3CG256900 Rh3DG252500 Rh5AG045400 Rh5BG044100 Rh5CG052900 Rh5DG043900
rosa_wichuraiana	Rw0G011120 Rw3G020270 Rw5G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	552
AbsI	CCTCGAGG	1 cut(s)	1696
Acc16I	TGCGCA	1 cut(s)	1670
AccB1I	GGYRCC	1 cut(s)	1786
AccB7I	CCANNNNNTGG	1 cut(s)	353
AccI	GTMKAC	2 cut(s)	1083, 1536
AccIII	TCCGGA	1 cut(s)	1240
AciI	CCGC	4 cut(s)	287, 404, 764, 1552
AclWI	GGATC	4 cut(s)	1163, 1215, 1311, 1328
AcoI	YGGCCR	1 cut(s)	813
AcsI	RAATTY	4 cut(s)	159, 988, 1674, 1970
AcuI	CTGAAG	3 cut(s)	404, 1829, 1916
AcyI	GRCGYC	1 cut(s)	1787
AdeI	CACNNNGTG	1 cut(s)	1389
AfaI	GTAC	4 cut(s)	565, 642, 1393, 1731
AfiI	CCNNNNNNNGG	4 cut(s)	106, 292, 353, 679
AflII	CTTAAG	1 cut(s)	1259
AflIII	ACRYGT	2 cut(s)	1118, 1281
AgeI	ACCGGT	1 cut(s)	736
AjnI	CCWGG	5 cut(s)	522, 1010, 1554, 1789, 1935
AleI	CACNNNNGTG	1 cut(s)	501
Alw21I	GWGCWC	2 cut(s)	276, 1591
Alw26I	GTCTC	4 cut(s)	23, 122, 479, 847
AlwI	GGATC	4 cut(s)	1163, 1215, 1311, 1328
Ama87I	CYCGRG	3 cut(s)	269, 1696, 1799
Aor13HI	TCCGGA	1 cut(s)	1240
AoxI	GGCC	2 cut(s)	108, 813
ApeKI	GCWGC	2 cut(s)	726, 1940
ApoI	RAATTY	4 cut(s)	159, 988, 1674, 1970
ArsI	GACNNNNNNTTYG	2 cut(s)	1834, 1866
AsiGI	ACCGGT	1 cut(s)	736
Asp700I	GAANNNNTTC	1 cut(s)	180
AspLEI	GCGC	2 cut(s)	1671, 1789
AspS9I	GGNCC	2 cut(s)	426, 1008
AsuHPI	GGTGA	2 cut(s)	393, 1379
AvaI	CYCGRG	3 cut(s)	269, 1696, 1799
AvaII	GGWCC	2 cut(s)	426, 1008
AxyI	CCTNAGG	1 cut(s)	1314
BaeI	ACNNNNGTAYC	2 cut(s)	632, 665
BalI	TGGCCA	1 cut(s)	815
BanI	GGYRCC	1 cut(s)	1786
BarI	GAAGNNNNNNTAC	2 cut(s)	1802, 1834
BauI	CACGAG	1 cut(s)	320
Bbv12I	GWGCWC	2 cut(s)	276, 1591
BbvCI	CCTCAGC	1 cut(s)	366
BbvI	GCAGC	2 cut(s)	713, 1952
BccI	CCATC	3 cut(s)	406, 689, 805
BciT130I	CCWGG	5 cut(s)	524, 1012, 1556, 1791, 1937
BclI	TGATCA	1 cut(s)	1369
BcoDI	GTCTC	4 cut(s)	23, 122, 479, 847
BfaI	CTAG	4 cut(s)	15, 281, 1229, 1847
BfmI	CTRYAG	1 cut(s)	953
BfoI	RGCGCY	1 cut(s)	1790
BfrI	CTTAAG	1 cut(s)	1259
BisI	GCNGC	2 cut(s)	727, 1941
BlsI	GCNGC	2 cut(s)	728, 1942
BmcAI	AGTACT	1 cut(s)	1731
Bme1390I	CCNGG	5 cut(s)	524, 1012, 1556, 1791, 1937
Bme18I	GGWCC	2 cut(s)	426, 1008
BmeT110I	CYCGRG	3 cut(s)	269, 1696, 1799
BmgT120I	GGNCC	2 cut(s)	426, 1008
BmiI	GGNNCC	1 cut(s)	1788
BmrFI	CCNGG	5 cut(s)	524, 1012, 1556, 1791, 1937
BmsI	GCATC	4 cut(s)	672, 1334, 1603, 1967
BpmI	CTGGAG	1 cut(s)	1919
Bpu10I	CCTNAGC	1 cut(s)	366
BpuEI	CTTGAG	3 cut(s)	856, 1754, 1924
Bsa29I	ATCGAT	1 cut(s)	1089
BsaHI	GRCGYC	1 cut(s)	1787
BsaI	GGTCTC	2 cut(s)	122, 847
BsaJI	CCNNGG	3 cut(s)	105, 1141, 1464
BsaWI	WCCGGW	3 cut(s)	676, 736, 1240
BsaXI	ACNNNNNCTCC	2 cut(s)	372, 402
Bsc4I	CCNNNNNNNGG	4 cut(s)	106, 292, 353, 679
Bse118I	RCCGGY	1 cut(s)	736
Bse1I	ACTGG	3 cut(s)	223, 228, 1746
Bse21I	CCTNAGG	1 cut(s)	1314
Bse3DI	GCAATG	2 cut(s)	1757, 2011
BseAI	TCCGGA	1 cut(s)	1240
BseBI	CCWGG	5 cut(s)	524, 1012, 1556, 1791, 1937
BseCI	ATCGAT	1 cut(s)	1089
BseDI	CCNNGG	3 cut(s)	105, 1141, 1464
BseGI	GGATG	3 cut(s)	67, 663, 816
BseLI	CCNNNNNNNGG	4 cut(s)	106, 292, 353, 679
BseMI	GCAATG	2 cut(s)	1757, 2011
BseMII	CTCAG	6 cut(s)	117, 357, 855, 1147, 1347, 1727
BseNI	ACTGG	3 cut(s)	223, 228, 1746
BseRI	GAGGAG	5 cut(s)	80, 257, 722, 766, 1545
BseXI	GCAGC	2 cut(s)	713, 1952
BsgI	GTGCAG	1 cut(s)	483
BshFI	GGCC	2 cut(s)	110, 815
BshNI	GGYRCC	1 cut(s)	1786
BshTI	ACCGGT	1 cut(s)	736
BshVI	ATCGAT	1 cut(s)	1089
BsiHKAI	GWGCWC	2 cut(s)	276, 1591
BsiHKCI	CYCGRG	3 cut(s)	269, 1696, 1799
BsiSI	CCGG	5 cut(s)	608, 677, 737, 1241, 1679
BslFI	GGGAC	1 cut(s)	1845
BslI	CCNNNNNNNGG	4 cut(s)	106, 292, 353, 679
BsmAI	GTCTC	4 cut(s)	23, 122, 479, 847
BsmBI	CGTCTC	1 cut(s)	479
BsmFI	GGGAC	1 cut(s)	1845
BsmI	GAATGC	1 cut(s)	450
BsnI	GGCC	2 cut(s)	110, 815
Bso31I	GGTCTC	2 cut(s)	122, 847
BsoBI	CYCGRG	3 cut(s)	269, 1696, 1799
Bsp1286I	GDGCHC	2 cut(s)	276, 1591
Bsp13I	TCCGGA	1 cut(s)	1240
Bsp143I	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
BspACI	CCGC	4 cut(s)	287, 404, 764, 1552
BspANI	GGCC	2 cut(s)	110, 815
BspCNI	CTCAG	6 cut(s)	118, 358, 856, 1146, 1346, 1726
BspDI	ATCGAT	1 cut(s)	1089
BspEI	TCCGGA	1 cut(s)	1240
BspLI	GGNNCC	1 cut(s)	1788
BspMAI	CTGCAG	1 cut(s)	957
BspPI	GGATC	4 cut(s)	1163, 1215, 1311, 1328
BspQI	GCTCTTC	1 cut(s)	1467
BspT107I	GGYRCC	1 cut(s)	1786
BspTI	CTTAAG	1 cut(s)	1259
BspTNI	GGTCTC	2 cut(s)	122, 847
BsrDI	GCAATG	2 cut(s)	1757, 2011
BsrFI	RCCGGY	1 cut(s)	736
BsrI	ACTGG	3 cut(s)	223, 228, 1746
BssAI	RCCGGY	1 cut(s)	736
BssECI	CCNNGG	3 cut(s)	105, 1141, 1464
BssMI	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
BssNI	GRCGYC	1 cut(s)	1787
BssSI	CACGAG	1 cut(s)	320
BssT1I	CCWWGG	1 cut(s)	1464
Bst2BI	CACGAG	1 cut(s)	320
Bst2UI	CCWGG	5 cut(s)	524, 1012, 1556, 1791, 1937
Bst4CI	ACNGT	6 cut(s)	414, 444, 557, 568, 1483, 1879
Bst6I	CTCTTC	1 cut(s)	1467
BstACI	GRCGYC	1 cut(s)	1787
BstAFI	CTTAAG	1 cut(s)	1259
BstC8I	GCNNGC	5 cut(s)	363, 466, 587, 1184, 1256
BstDEI	CTNAG	9 cut(s)	126, 366, 720, 864, 1133, 1314, 1333, 1713, 1983
BstENI	CCTNNNNNAGG	1 cut(s)	104
BstF5I	GGATG	3 cut(s)	67, 663, 816
BstH2I	RGCGCY	1 cut(s)	1790
BstHHI	GCGC	2 cut(s)	1671, 1789
BstKTI	GATC	8 cut(s)	253, 758, 1158, 1210, 1306, 1323, 1372, 1642
BstMAI	GTCTC	4 cut(s)	23, 122, 479, 847
BstMBI	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
BstNI	CCWGG	5 cut(s)	524, 1012, 1556, 1791, 1937
BstNSI	RCATGY	2 cut(s)	1221, 1285
BstSCI	CCNGG	5 cut(s)	522, 1010, 1554, 1789, 1935
BstSFI	CTRYAG	1 cut(s)	953
BstV1I	GCAGC	2 cut(s)	713, 1952
BstX2I	RGATCY	1 cut(s)	1207
BstYI	RGATCY	1 cut(s)	1207
Bsu15I	ATCGAT	1 cut(s)	1089
Bsu36I	CCTNAGG	1 cut(s)	1314
BsuRI	GGCC	2 cut(s)	110, 815
BsuTUI	ATCGAT	1 cut(s)	1089
BtgZI	GCGATG	1 cut(s)	1311
BtsCI	GGATG	3 cut(s)	67, 663, 816
BtsI	GCAGTG	1 cut(s)	807
BtsIMutI	CAGTG	3 cut(s)	165, 216, 807
Cac8I	GCNNGC	5 cut(s)	363, 466, 587, 1184, 1256
CfoI	GCGC	2 cut(s)	1671, 1789
Cfr10I	RCCGGY	1 cut(s)	736
Cfr13I	GGNCC	2 cut(s)	426, 1008
ClaI	ATCGAT	1 cut(s)	1089
CseI	GACGC	2 cut(s)	623, 1880
Csp6I	GTAC	4 cut(s)	564, 641, 1392, 1730
CspAI	ACCGGT	1 cut(s)	736
CspCI	CAANNNNNGTGG	2 cut(s)	154, 189
CviAII	CATG	6 cut(s)	1159, 1218, 1282, 1400, 1524, 1643
CviQI	GTAC	4 cut(s)	564, 641, 1392, 1730
DdeI	CTNAG	9 cut(s)	126, 366, 720, 864, 1133, 1314, 1333, 1713, 1983
DinI	GGCGCC	1 cut(s)	1788
DpnI	GATC	8 cut(s)	252, 757, 1157, 1209, 1305, 1322, 1371, 1641
DpnII	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
DraI	TTTAAA	1 cut(s)	775
DraIII	CACNNNGTG	1 cut(s)	1389
EaeI	YGGCCR	1 cut(s)	813
Eam1104I	CTCTTC	1 cut(s)	1467
EarI	CTCTTC	1 cut(s)	1467
Eco130I	CCWWGG	1 cut(s)	1464
Eco31I	GGTCTC	2 cut(s)	122, 847
Eco47I	GGWCC	2 cut(s)	426, 1008
Eco57I	CTGAAG	3 cut(s)	404, 1829, 1916
Eco81I	CCTNAGG	1 cut(s)	1314
Eco88I	CYCGRG	3 cut(s)	269, 1696, 1799
EcoNI	CCTNNNNNAGG	1 cut(s)	104
EcoRI	GAATTC	1 cut(s)	1674
EcoRII	CCWGG	5 cut(s)	522, 1010, 1554, 1789, 1935
EcoT14I	CCWWGG	1 cut(s)	1464
EgeI	GGCGCC	1 cut(s)	1788
EheI	GGCGCC	1 cut(s)	1788
ErhI	CCWWGG	1 cut(s)	1464
Esp3I	CGTCTC	1 cut(s)	479
FaeI	CATG	6 cut(s)	1162, 1221, 1285, 1403, 1527, 1646
FalI	AAGNNNNNCTT	2 cut(s)	569, 601
FaqI	GGGAC	1 cut(s)	1845
FatI	CATG	6 cut(s)	1158, 1217, 1281, 1399, 1523, 1642
FauI	CCCGC	2 cut(s)	294, 771
FauNDI	CATATG	1 cut(s)	1764
FbaI	TGATCA	1 cut(s)	1369
FblI	GTMKAC	2 cut(s)	1083, 1536
Fnu4HI	GCNGC	2 cut(s)	727, 1941
FokI	GGATG	3 cut(s)	74, 650, 823
Fsp4HI	GCNGC	2 cut(s)	727, 1941
FspBI	CTAG	4 cut(s)	15, 281, 1229, 1847
FspI	TGCGCA	1 cut(s)	1670
GlaI	GCGC	2 cut(s)	1670, 1788
GluI	GCNGC	2 cut(s)	727, 1941
GsuI	CTGGAG	1 cut(s)	1919
HaeII	RGCGCY	1 cut(s)	1790
HaeIII	GGCC	2 cut(s)	110, 815
HapII	CCGG	5 cut(s)	608, 677, 737, 1241, 1679
HgaI	GACGC	2 cut(s)	623, 1880
HhaI	GCGC	2 cut(s)	1671, 1789
Hin1I	GRCGYC	1 cut(s)	1787
Hin1II	CATG	6 cut(s)	1162, 1221, 1285, 1403, 1527, 1646
Hin6I	GCGC	2 cut(s)	1669, 1787
HinP1I	GCGC	2 cut(s)	1669, 1787
HincII	GTYRAC	2 cut(s)	714, 1084
HindII	GTYRAC	2 cut(s)	714, 1084
HindIII	AAGCTT	3 cut(s)	179, 350, 1184
HinfI	GANTC	7 cut(s)	310, 323, 805, 828, 977, 1172, 2016
HpaI	GTTAAC	1 cut(s)	714
HpaII	CCGG	5 cut(s)	608, 677, 737, 1241, 1679
HphI	GGTGA	2 cut(s)	393, 1379
Hpy166II	GTNNAC	8 cut(s)	714, 973, 1084, 1392, 1502, 1537, 1875, 1910
Hpy8I	GTNNAC	8 cut(s)	714, 973, 1084, 1392, 1502, 1537, 1875, 1910
HpyAV	CCTTC	3 cut(s)	653, 1021, 1038
HpyCH4III	ACNGT	6 cut(s)	414, 444, 557, 568, 1483, 1879
HpyCH4IV	ACGT	2 cut(s)	1120, 1821
HpyF3I	CTNAG	9 cut(s)	126, 366, 720, 864, 1133, 1314, 1333, 1713, 1983
HpySE526I	ACGT	2 cut(s)	1120, 1821
Hsp92I	GRCGYC	1 cut(s)	1787
Hsp92II	CATG	6 cut(s)	1162, 1221, 1285, 1403, 1527, 1646
HspAI	GCGC	2 cut(s)	1669, 1787
KasI	GGCGCC	1 cut(s)	1786
Kpn2I	TCCGGA	1 cut(s)	1240
Ksp22I	TGATCA	1 cut(s)	1369
KspAI	GTTAAC	1 cut(s)	714
Kzo9I	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
LguI	GCTCTTC	1 cut(s)	1467
LmnI	GCTCC	6 cut(s)	295, 393, 1162, 1214, 1586, 1842
Lsp1109I	GCAGC	2 cut(s)	713, 1952
LweI	GCATC	4 cut(s)	672, 1334, 1603, 1967
MaeI	CTAG	4 cut(s)	15, 281, 1229, 1847
MaeII	ACGT	2 cut(s)	1120, 1821
MaeIII	GTNAC	6 cut(s)	116, 568, 922, 1220, 1292, 1690
MalI	GATC	8 cut(s)	252, 757, 1157, 1209, 1305, 1322, 1371, 1641
MboI	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
MboII	GAAGA	7 cut(s)	640, 1030, 1481, 1484, 1649, 1822, 1987
MfeI	CAATTG	1 cut(s)	482
MflI	RGATCY	1 cut(s)	1207
MhlI	GDGCHC	2 cut(s)	276, 1591
MlsI	TGGCCA	1 cut(s)	815
MluNI	TGGCCA	1 cut(s)	815
Mly113I	GGCGCC	1 cut(s)	1787
MlyI	GAGTC	3 cut(s)	304, 332, 986
MmeI	TCCRAC	4 cut(s)	399, 634, 805, 1564
Mox20I	TGGCCA	1 cut(s)	815
MroI	TCCGGA	1 cut(s)	1240
MroXI	GAANNNNTTC	1 cut(s)	180
MscI	TGGCCA	1 cut(s)	815
MseI	TTAA	5 cut(s)	531, 713, 774, 1260, 1350
MslI	CAYNNNNRTG	3 cut(s)	459, 501, 1647
Msp20I	TGGCCA	1 cut(s)	815
MspCI	CTTAAG	1 cut(s)	1259
MspI	CCGG	5 cut(s)	608, 677, 737, 1241, 1679
MspR9I	CCNGG	5 cut(s)	524, 1012, 1556, 1791, 1937
MunI	CAATTG	1 cut(s)	482
Mva1269I	GAATGC	1 cut(s)	450
MvaI	CCWGG	5 cut(s)	524, 1012, 1556, 1791, 1937
NarI	GGCGCC	1 cut(s)	1787
NdeI	CATATG	1 cut(s)	1764
NdeII	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
NlaIII	CATG	6 cut(s)	1162, 1221, 1285, 1403, 1527, 1646
NlaIV	GGNNCC	1 cut(s)	1788
NmuCI	GTSAC	1 cut(s)	1220
NsbI	TGCGCA	1 cut(s)	1670
NspI	RCATGY	2 cut(s)	1221, 1285
OliI	CACNNNNGTG	1 cut(s)	501
PaeR7I	CTCGAG	3 cut(s)	269, 1696, 1799
PciI	ACATGT	1 cut(s)	1281
PciSI	GCTCTTC	1 cut(s)	1467
PctI	GAATGC	1 cut(s)	450
PdmI	GAANNNNTTC	1 cut(s)	180
PfeI	GAWTC	4 cut(s)	805, 828, 1172, 2016
PflMI	CCANNNNNTGG	1 cut(s)	353
PinAI	ACCGGT	1 cut(s)	736
PkrI	GCNGC	2 cut(s)	728, 1942
PleI	GAGTC	3 cut(s)	304, 331, 985
PluTI	GGCGCC	1 cut(s)	1790
PpsI	GAGTC	3 cut(s)	304, 331, 985
PscI	ACATGT	1 cut(s)	1281
PsiI	TTATAA	1 cut(s)	552
Psp6I	CCWGG	5 cut(s)	522, 1010, 1554, 1789, 1935
PspGI	CCWGG	5 cut(s)	522, 1010, 1554, 1789, 1935
PspN4I	GGNNCC	1 cut(s)	1788
PspPI	GGNCC	2 cut(s)	426, 1008
PspXI	VCTCGAGB	2 cut(s)	269, 1696
PstI	CTGCAG	1 cut(s)	957
PsuI	RGATCY	1 cut(s)	1207
RsaI	GTAC	4 cut(s)	565, 642, 1393, 1731
RsaNI	GTAC	4 cut(s)	564, 641, 1392, 1730
RseI	CAYNNNNRTG	3 cut(s)	459, 501, 1647
SalI	GTCGAC	1 cut(s)	1082
SapI	GCTCTTC	1 cut(s)	1467
SaqAI	TTAA	5 cut(s)	531, 713, 774, 1260, 1350
SatI	GCNGC	2 cut(s)	727, 1941
Sau3AI	GATC	8 cut(s)	250, 755, 1155, 1207, 1303, 1320, 1369, 1639
Sau96I	GGNCC	2 cut(s)	426, 1008
ScaI	AGTACT	1 cut(s)	1731
SchI	GAGTC	3 cut(s)	304, 332, 986
ScrFI	CCNGG	5 cut(s)	524, 1012, 1556, 1791, 1937
SduI	GDGCHC	2 cut(s)	276, 1591
SfaNI	GCATC	4 cut(s)	672, 1334, 1603, 1967
SfcI	CTRYAG	1 cut(s)	953
SfoI	GGCGCC	1 cut(s)	1788
Sfr274I	CTCGAG	3 cut(s)	269, 1696, 1799
SinI	GGWCC	2 cut(s)	426, 1008
SlaI	CTCGAG	3 cut(s)	269, 1696, 1799
SmiMI	CAYNNNNRTG	3 cut(s)	459, 501, 1647
SmlI	CTYRAG	7 cut(s)	269, 871, 1259, 1696, 1733, 1799, 1903
SmoI	CTYRAG	7 cut(s)	269, 871, 1259, 1696, 1733, 1799, 1903
SsiI	CCGC	4 cut(s)	287, 404, 764, 1552
SspDI	GGCGCC	1 cut(s)	1786
SspI	AATATT	1 cut(s)	702
SspMI	CTAG	4 cut(s)	15, 281, 1229, 1847
StyD4I	CCNGG	5 cut(s)	522, 1010, 1554, 1789, 1935
StyI	CCWWGG	1 cut(s)	1464
TaaI	ACNGT	6 cut(s)	414, 444, 557, 568, 1483, 1879
TaiI	ACGT	2 cut(s)	1123, 1824
TaqI	TCGA	5 cut(s)	270, 1083, 1089, 1697, 1800
TatI	WGTACW	2 cut(s)	1391, 1729
TfiI	GAWTC	4 cut(s)	805, 828, 1172, 2016
Tru1I	TTAA	5 cut(s)	531, 713, 774, 1260, 1350
Tru9I	TTAA	5 cut(s)	531, 713, 774, 1260, 1350
TscAI	CASTG	3 cut(s)	172, 223, 807
TseFI	GTSAC	1 cut(s)	1220
TseI	GCWGC	2 cut(s)	726, 1940
Tsp45I	GTSAC	1 cut(s)	1220
TspDTI	ATGAA	7 cut(s)	17, 190, 443, 1164, 1348, 1781, 1944
TspRI	CASTG	3 cut(s)	172, 223, 807
Van91I	CCANNNNNTGG	1 cut(s)	353
Vha464I	CTTAAG	1 cut(s)	1259
VpaK11BI	GGWCC	2 cut(s)	426, 1008
XagI	CCTNNNNNAGG	1 cut(s)	104
XapI	RAATTY	4 cut(s)	159, 988, 1674, 1970
XbaI	TCTAGA	1 cut(s)	1228
XceI	RCATGY	2 cut(s)	1221, 1285
XcmI	CCANNNNNNNNNTGG	2 cut(s)	34, 454
XhoI	CTCGAG	3 cut(s)	269, 1696, 1799
XmiI	GTMKAC	2 cut(s)	1083, 1536
XmnI	GAANNNNTTC	1 cut(s)	180
XspI	CTAG	4 cut(s)	15, 281, 1229, 1847
ZrmI	AGTACT	1 cut(s)	1731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.