Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001713

Physical Location & Seq

Genomic Coordinates Forward (+)

25368590 .. 25370800

Gene Structure 2211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ44459

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGAGGCGTCTCTGTCTAGTCTCAATTCCTATCCAAACTCGGAAAAAAATTCCTATCCAAACTCGGAAAAAAGCTTGACCATTGAGTATGTCAGAGAGACCCTCATTCCCATACTCATCGAGCATCTCAACAAAGCCAAGGGTTACCTTTCCAATAACCACGCCGACAACGATGAGGCAGACGAACTTACCACTGAAATGGAAAAGCTACGCAAAGACCTCATTTTTATCAAGCAAGTTTTCACCGGGTTGGACACTTTTGAAAAAAGCACAAGTGATCTTTTCAAGGTTCTCCAGCAACCAGAACACAGCCTGAAGCAGCTTTTGGAGCCTCCAGGAAGGCAGACCCGCTTCCACGAGCCGCTTGCAAAGCAATTTAAGCCCAAGCTTGGAGTGCTTGGCGAGGTTATCATCAAACTGAAGCTGCTACTTCCATCACCGCACAAACTGTTGTTGGACAGGTCCAGTACTTTTCAACTGTCCAGCATTCATTCGGGTGGAGACGAGCATCTCAATCGATTGCTTGGCTTACAGTCAAGTGAGGTGTTCTATAAAAGTCAGGCTTTTAAAGACTTTCAGGATGTTTATAACAGTCTTGGTGTTACTGCAAAGCTCTGCTTGCTGAGTTTCTCGGTGTTTCCGGCGAATGAGGTTCTAAAGAAGAGTCGTTTGGTACATTGGTGGGTTGGAGAAGAGATCCTCTACCCTCCGGTTGATGGTGAGACGGTGGAGGAAATTGCTGATGGAATATTTAAAGACTTAGCAGTGAAGGGCTGCATTGAACCGGTCAAGAAGAAGCGGAGATCAGACGTGCACAGTTTTAAAATGCACCCCCTAATTCGTTCAGCGGTGATTCGGCTTGCCAAAGACGTTGAGTTCTTAGATTTTGATGACAAAGGGAGACTAACTACTGAATTTTCAAAGTCTTATCGCGCGTGTTTGGTAAGTGATTCTGAACTGGTAGGTTCTCAACTGAAATCGGCAAAGAAAACCCAGGTGGAAATAACCGCGGAATTAGAAAAACTGCAGACTATATTTAATGTGAACGATTCTTATCCGAATTTTTCCCAAATGGAATGGTCCAAATTGAAGAATGTGAAGGTTCTTTATCTTGGAAGGTGGCACAGCAGGGCAAAACATCACATTGAACTAGTTGACAGCAAGTTCTTGGAAGCGTTGGTGTTTATGACACGTTTGAGGTTTCTCAGCCTTCGAGGAATATCGGGCATCATGGAGCTTCCTGATTCATTATGCAAGCTTGTTTGTTTGAAGATCTTGGATCTTGGAGCATGTCACAATCTAGAGGTGCTTCCGAAAAAAATAAGCTTGCTTAAGAAGCTCACACACTTGGATATGTCCGAGTGTTACTTACTGGATCGTATGCCTAAGGGGATCGCATTGCTCTCAAAACTCGAAGTTCTTAAGGGGTTCATAATTGGTGATCCCAAGAAGCACACTTCATGTACTCTGCATGATTTGTCAGGATTGCAAAAGTTGAAAAAATTGACAATTAACACAAGCAGGGAGGATTTTCCCAACGAAGAAGAGCTCACCGTTTTACAAGGATTTGGTTCGCTTCAAAAGCTAACAATAGCATGGGGAGGAGTAGAATTTCTTGCCAACCGCCAAAATAAGCATAGGAAGCAGGACAATGTTGGAGCACAACCAAAAACAGCAAGCACAACGGATGCCAGTGGAGGTAACAGAAAAGAAGATGATGCTAATGGCATTCAAAATCATGTGCCAAAAACCCCGGCAAGGTCATTAACCTTCAAGCGAGGGGCTATATTGGCTCCGAGGATTCGGGAACATTTTGAAGCACTTGAGAAACTGGACTTGCAATGCTACCCTCATATGAAAGCACCGACTTGGTTGACTCCCGGAATGCTCAAGAAGCTGGAAAAACTCTACATTAGAGGGGGACAGCTCCAAAGTCTAGGTCAAGTTCAGGAGAGTGACAAGTGGACAGTTGAGATATTGCGTTTGAAGTTCTTGAGAGAACTAAAGATGGATTGGAATGACCTCCAGTCAGCATTTCCAAAATTGAATTATGTGGAGAAATTTAGATGCCCTAAGACCACTTTCTTCCCATGCGATGAGACTGGAGTCTGGCTGAAGCCCGGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

709

Amino Acids

80.73

Weight (kDa)

8.99

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	212 - 281	1.8e-09	Disease resistance protein Winged helix domain
LRR_14	PF23598	358 - 532	2.9e-18	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45520 AT5G45520
fragaria_vesca	FvH4_6g22160 FvH4_6g22160
malus_domestica	MD10G1305300.v1.1 MD12G1056400.v1.1
prunus_persica	Prupe.4G034300_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078600_v2.0.a1
pyrus_communis	pycom10g25780 pycom12g04920
rosa_chinensis	RchiOBHm_Chr3g0479511 RchiOBHm_Chr5g0005761
rosa_laevigata	RLG00000023563
rosa_multiflora	Rmu_sc0004732.1_g000003 Rmu_sc0010248.1_g000001 Rmu_sc0014513.1_g000002
rosa_roxburghii	Rroxscaffold_1G00070100 Rroxscaffold_6G00402180
rosa_rugosa	Rorug03G0175900 Rorug03G0176000 Rorug03G0176100 Rorug03G0176200 Rorug04G0417900
rosa_samantha	Rh3AG226900 Rh3BG260000 Rh3CG234800 Rh3CG256900 Rh3DG252500 Rh5AG045400 Rh5BG044100 Rh5CG052900 Rh5DG043900
rosa_wichuraiana	Rw0G011120 Rw3G020270 Rw5G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	588
AccII	CGCG	3 cut(s)	933, 935, 1010
AciI	CCGC	8 cut(s)	349, 362, 440, 799, 848, 1008, 1010, 1624
AclWI	GGATC	5 cut(s)	691, 1287, 1383, 1400, 1436
AcsI	RAATTY	5 cut(s)	49, 914, 1060, 1610, 2060
AcuI	CTGAAG	2 cut(s)	335, 440
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	3 cut(s)	469, 675, 1465
AfiI	CCNNNNNNNGG	3 cut(s)	389, 716, 1758
AflII	CTTAAG	2 cut(s)	1331, 1421
AflIII	ACRYGT	1 cut(s)	1190
AgeI	ACCGGT	1 cut(s)	784
AhdI	GACNNNNNGTC	1 cut(s)	2026
AhlI	ACTAGT	1 cut(s)	1150
AjiI	CACGTC	1 cut(s)	811
AjnI	CCWGG	2 cut(s)	334, 993
AjuI	GAANNNNNNNTTGG	4 cut(s)	308, 340, 653, 685
Alw21I	GWGCWC	3 cut(s)	816, 1551, 1663
Alw26I	GTCTC	7 cut(s)	15, 26, 92, 495, 716, 895, 2093
Alw44I	GTGCAC	1 cut(s)	812
AlwI	GGATC	5 cut(s)	691, 1287, 1383, 1400, 1436
ApaLI	GTGCAC	1 cut(s)	812
ApeKI	GCWGC	3 cut(s)	319, 424, 774
ApoI	RAATTY	5 cut(s)	49, 914, 1060, 1610, 2060
ArsI	GACNNNNNNTTYG	2 cut(s)	1924, 1956
AsiGI	ACCGGT	1 cut(s)	784
AspLEI	GCGC	1 cut(s)	935
AspS9I	GGNCC	2 cut(s)	462, 1080
AsuC2I	CCSGG	4 cut(s)	247, 1754, 1881, 2121
AsuHPI	GGTGA	6 cut(s)	235, 429, 731, 862, 1451, 1543
AvaII	GGWCC	2 cut(s)	462, 1080
AxyI	CCTNAGG	1 cut(s)	1386
BaeGI	GKGCMC	1 cut(s)	816
BaeI	ACNNNNGTAYC	2 cut(s)	665, 698
BanII	GRGCYC	1 cut(s)	1551
BauI	CACGAG	1 cut(s)	356
Bbv12I	GWGCWC	3 cut(s)	816, 1551, 1663
BbvI	GCAGC	3 cut(s)	331, 411, 761
BccI	CCATC	4 cut(s)	442, 710, 737, 2002
BcgI	CGANNNNNNTGC	4 cut(s)	347, 381, 497, 531
BciT130I	CCWGG	2 cut(s)	336, 995
BcnI	CCSGG	4 cut(s)	247, 1754, 1881, 2121
BcoDI	GTCTC	7 cut(s)	15, 26, 92, 495, 716, 895, 2093
BcuI	ACTAGT	1 cut(s)	1150
BfaI	CTAG	4 cut(s)	18, 1151, 1301, 1937
BfmI	CTRYAG	1 cut(s)	1025
BfrI	CTTAAG	2 cut(s)	1331, 1421
BglII	AGATCT	1 cut(s)	1272
BisI	GCNGC	4 cut(s)	320, 362, 425, 775
BlsI	GCNGC	4 cut(s)	321, 363, 426, 776
BmcAI	AGTACT	1 cut(s)	469
Bme1390I	CCNGG	6 cut(s)	247, 336, 995, 1754, 1881, 2121
Bme18I	GGWCC	2 cut(s)	462, 1080
BmeRI	GACNNNNNGTC	1 cut(s)	2026
BmgBI	CACGTC	1 cut(s)	811
BmgT120I	GGNCC	2 cut(s)	462, 1080
BmiI	GGNNCC	2 cut(s)	330, 1794
BmrFI	CCNGG	6 cut(s)	247, 336, 995, 1754, 1881, 2121
BmsI	GCATC	6 cut(s)	133, 517, 1236, 1678, 1708, 2057
BoxI	GACNNNNGTC	1 cut(s)	2105
BplI	GAGNNNNNCTC	2 cut(s)	87, 119
BpmI	CTGGAG	4 cut(s)	278, 318, 2009, 2124
BpuEI	CTTGAG	3 cut(s)	1844, 1874, 2014
BpuMI	CCSGG	4 cut(s)	247, 1754, 1881, 2121
Bsa29I	ATCGAT	1 cut(s)	517
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaHI	GRCGYC	1 cut(s)	8
BsaI	GGTCTC	1 cut(s)	92
BsaJI	CCNNGG	5 cut(s)	138, 993, 1008, 1752, 1796
BsaWI	WCCGGW	2 cut(s)	709, 784
Bsc4I	CCNNNNNNNGG	3 cut(s)	389, 716, 1758
Bse118I	RCCGGY	1 cut(s)	784
Bse1I	ACTGG	7 cut(s)	465, 963, 1377, 1692, 1836, 2026, 2107
Bse21I	CCTNAGG	1 cut(s)	1386
Bse3DI	GCAATG	2 cut(s)	1397, 1847
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	2 cut(s)	336, 995
BseCI	ATCGAT	1 cut(s)	517
BseDI	CCNNGG	5 cut(s)	138, 993, 1008, 1752, 1796
BseGI	GGATG	2 cut(s)	586, 1693
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	3 cut(s)	389, 716, 1758
BseMI	GCAATG	2 cut(s)	1397, 1847
BseMII	CTCAG	2 cut(s)	614, 1219
BseNI	ACTGG	7 cut(s)	465, 963, 1377, 1692, 1836, 2026, 2107
BseRI	GAGGAG	1 cut(s)	1617
BseSI	GKGCMC	1 cut(s)	816
BseXI	GCAGC	3 cut(s)	331, 411, 761
Bsh1236I	CGCG	3 cut(s)	933, 935, 1010
BshTI	ACCGGT	1 cut(s)	784
BshVI	ATCGAT	1 cut(s)	517
BsiHKAI	GWGCWC	3 cut(s)	816, 1551, 1663
BsiSI	CCGG	7 cut(s)	246, 641, 710, 785, 1754, 1881, 2121
BslFI	GGGAC	1 cut(s)	1935
BslI	CCNNNNNNNGG	3 cut(s)	389, 716, 1758
BsmAI	GTCTC	7 cut(s)	15, 26, 92, 495, 716, 895, 2093
BsmBI	CGTCTC	3 cut(s)	15, 495, 716
BsmFI	GGGAC	1 cut(s)	1935
BsmI	GAATGC	3 cut(s)	486, 1728, 1890
Bso31I	GGTCTC	1 cut(s)	92
Bsp1286I	GDGCHC	3 cut(s)	816, 1551, 1663
Bsp143I	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
BspACI	CCGC	8 cut(s)	349, 362, 440, 799, 848, 1008, 1010, 1624
BspCNI	CTCAG	2 cut(s)	615, 1218
BspDI	ATCGAT	1 cut(s)	517
BspFNI	CGCG	3 cut(s)	933, 935, 1010
BspLI	GGNNCC	2 cut(s)	330, 1794
BspMAI	CTGCAG	1 cut(s)	1029
BspPI	GGATC	5 cut(s)	691, 1287, 1383, 1400, 1436
BspQI	GCTCTTC	1 cut(s)	1539
BspTI	CTTAAG	2 cut(s)	1331, 1421
BspTNI	GGTCTC	1 cut(s)	92
BsrDI	GCAATG	2 cut(s)	1397, 1847
BsrFI	RCCGGY	1 cut(s)	784
BsrI	ACTGG	7 cut(s)	465, 963, 1377, 1692, 1836, 2026, 2107
BssAI	RCCGGY	1 cut(s)	784
BssECI	CCNNGG	5 cut(s)	138, 993, 1008, 1752, 1796
BssMI	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
BssNI	GRCGYC	1 cut(s)	8
BssSI	CACGAG	1 cut(s)	356
BssT1I	CCWWGG	1 cut(s)	138
Bst2BI	CACGAG	1 cut(s)	356
Bst2UI	CCWGG	2 cut(s)	336, 995
Bst4CI	ACNGT	8 cut(s)	450, 480, 534, 593, 727, 818, 1555, 1969
Bst6I	CTCTTC	3 cut(s)	656, 687, 1539
BstACI	GRCGYC	1 cut(s)	8
BstAFI	CTTAAG	2 cut(s)	1331, 1421
BstC8I	GCNNGC	6 cut(s)	366, 620, 861, 1256, 1328, 1678
BstDEI	CTNAG	6 cut(s)	623, 760, 880, 1205, 1386, 2073
BstDSI	CCRYGG	1 cut(s)	1008
BstEII	GGTNACC	1 cut(s)	143
BstF5I	GGATG	2 cut(s)	586, 1693
BstFNI	CGCG	3 cut(s)	933, 935, 1010
BstHHI	GCGC	1 cut(s)	935
BstKTI	GATC	8 cut(s)	280, 699, 806, 1275, 1282, 1378, 1395, 1444
BstMAI	GTCTC	7 cut(s)	15, 26, 92, 495, 716, 895, 2093
BstMBI	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
BstNI	CCWGG	2 cut(s)	336, 995
BstNSI	RCATGY	1 cut(s)	1293
BstPAI	GACNNNNGTC	1 cut(s)	2105
BstPI	GGTNACC	1 cut(s)	143
BstSCI	CCNGG	6 cut(s)	245, 334, 993, 1752, 1879, 2119
BstSFI	CTRYAG	1 cut(s)	1025
BstSLI	GKGCMC	1 cut(s)	816
BstUI	CGCG	3 cut(s)	933, 935, 1010
BstV1I	GCAGC	3 cut(s)	331, 411, 761
BstX2I	RGATCY	3 cut(s)	696, 1272, 1279
BstXI	CCANNNNNNTGG	1 cut(s)	199
BstYI	RGATCY	3 cut(s)	696, 1272, 1279
Bsu15I	ATCGAT	1 cut(s)	517
Bsu36I	CCTNAGG	1 cut(s)	1386
BsuTUI	ATCGAT	1 cut(s)	517
BtgI	CCRYGG	1 cut(s)	1008
BtgZI	GCGATG	1 cut(s)	2109
BtrI	CACGTC	1 cut(s)	811
BtsCI	GGATG	2 cut(s)	586, 1693
BtsI	GCAGTG	1 cut(s)	771
BtsIMutI	CAGTG	3 cut(s)	192, 771, 1699
Cac8I	GCNNGC	6 cut(s)	366, 620, 861, 1256, 1328, 1678
CfoI	GCGC	1 cut(s)	935
Cfr10I	RCCGGY	1 cut(s)	784
Cfr13I	GGNCC	2 cut(s)	462, 1080
Cfr42I	CCGCGG	1 cut(s)	1011
ClaI	ATCGAT	1 cut(s)	517
Csp6I	GTAC	3 cut(s)	468, 674, 1464
CspAI	ACCGGT	1 cut(s)	784
CviAII	CATG	7 cut(s)	1231, 1290, 1461, 1472, 1596, 1739, 2091
CviQI	GTAC	3 cut(s)	468, 674, 1464
DdeI	CTNAG	6 cut(s)	623, 760, 880, 1205, 1386, 2073
DpnI	GATC	8 cut(s)	279, 698, 805, 1274, 1281, 1377, 1394, 1443
DpnII	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
DraI	TTTAAA	3 cut(s)	568, 754, 823
DriI	GACNNNNNGTC	1 cut(s)	2026
Eam1104I	CTCTTC	3 cut(s)	656, 687, 1539
Eam1105I	GACNNNNNGTC	1 cut(s)	2026
EarI	CTCTTC	3 cut(s)	656, 687, 1539
Ecl136II	GAGCTC	1 cut(s)	1549
Eco130I	CCWWGG	1 cut(s)	138
Eco24I	GRGCYC	1 cut(s)	1551
Eco31I	GGTCTC	1 cut(s)	92
Eco47I	GGWCC	2 cut(s)	462, 1080
Eco53kI	GAGCTC	1 cut(s)	1549
Eco57I	CTGAAG	2 cut(s)	335, 440
Eco81I	CCTNAGG	1 cut(s)	1386
Eco91I	GGTNACC	1 cut(s)	143
EcoICRI	GAGCTC	1 cut(s)	1549
EcoO65I	GGTNACC	1 cut(s)	143
EcoRII	CCWGG	2 cut(s)	334, 993
EcoT14I	CCWWGG	1 cut(s)	138
EcoT38I	GRGCYC	1 cut(s)	1551
ErhI	CCWWGG	1 cut(s)	138
Esp3I	CGTCTC	3 cut(s)	15, 495, 716
FaeI	CATG	7 cut(s)	1234, 1293, 1464, 1475, 1599, 1742, 2094
FalI	AAGNNNNNCTT	4 cut(s)	547, 579, 602, 634
FaqI	GGGAC	1 cut(s)	1935
FatI	CATG	7 cut(s)	1230, 1289, 1460, 1471, 1595, 1738, 2090
FauI	CCCGC	1 cut(s)	356
FauNDI	CATATG	1 cut(s)	1854
Fnu4HI	GCNGC	4 cut(s)	320, 362, 425, 775
FokI	GGATG	2 cut(s)	593, 1700
FriOI	GRGCYC	1 cut(s)	1551
Fsp4HI	GCNGC	4 cut(s)	320, 362, 425, 775
FspBI	CTAG	4 cut(s)	18, 1151, 1301, 1937
GlaI	GCGC	1 cut(s)	934
GluI	GCNGC	4 cut(s)	320, 362, 425, 775
GsuI	CTGGAG	4 cut(s)	278, 318, 2009, 2124
HapII	CCGG	7 cut(s)	246, 641, 710, 785, 1754, 1881, 2121
HhaI	GCGC	1 cut(s)	935
Hin1I	GRCGYC	1 cut(s)	8
Hin1II	CATG	7 cut(s)	1234, 1293, 1464, 1475, 1599, 1742, 2094
Hin6I	GCGC	1 cut(s)	933
HinP1I	GCGC	1 cut(s)	933
HincII	GTYRAC	2 cut(s)	1156, 1875
HindII	GTYRAC	2 cut(s)	1156, 1875
HindIII	AAGCTT	4 cut(s)	73, 386, 1256, 1324
HinfI	GANTC	8 cut(s)	664, 853, 950, 1049, 1244, 1801, 1876, 2106
HpaII	CCGG	7 cut(s)	246, 641, 710, 785, 1754, 1881, 2121
HphI	GGTGA	6 cut(s)	235, 429, 731, 862, 1451, 1543
Hpy166II	GTNNAC	5 cut(s)	814, 1045, 1156, 1875, 1965
Hpy188I	TCNGA	9 cut(s)	43, 67, 95, 808, 955, 1059, 1314, 1360, 1797
Hpy188III	TCNNGA	9 cut(s)	578, 790, 1241, 1301, 1482, 1805, 1891, 1949, 1993
Hpy8I	GTNNAC	5 cut(s)	814, 1045, 1156, 1875, 1965
HpyAV	CCTTC	6 cut(s)	333, 763, 1093, 1110, 1220, 1780
HpyCH4III	ACNGT	8 cut(s)	450, 480, 534, 593, 727, 818, 1555, 1969
HpyCH4IV	ACGT	3 cut(s)	810, 870, 1192
HpyF3I	CTNAG	6 cut(s)	623, 760, 880, 1205, 1386, 2073
HpySE526I	ACGT	3 cut(s)	810, 870, 1192
Hsp92I	GRCGYC	1 cut(s)	8
Hsp92II	CATG	7 cut(s)	1234, 1293, 1464, 1475, 1599, 1742, 2094
HspAI	GCGC	1 cut(s)	933
KspI	CCGCGG	1 cut(s)	1011
Kzo9I	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
LguI	GCTCTTC	1 cut(s)	1539
LmnI	GCTCC	6 cut(s)	328, 1234, 1286, 1658, 1798, 1932
Lsp1109I	GCAGC	3 cut(s)	331, 411, 761
LweI	GCATC	6 cut(s)	133, 517, 1236, 1678, 1708, 2057
MaeI	CTAG	4 cut(s)	18, 1151, 1301, 1937
MaeII	ACGT	3 cut(s)	810, 870, 1192
MaeIII	GTNAC	6 cut(s)	143, 601, 1292, 1364, 1700, 1955
MalI	GATC	8 cut(s)	279, 698, 805, 1274, 1281, 1377, 1394, 1443
MboI	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
MboII	GAAGA	9 cut(s)	673, 704, 805, 1102, 1282, 1553, 1556, 1724, 2077
MflI	RGATCY	3 cut(s)	696, 1272, 1279
MhlI	GDGCHC	3 cut(s)	816, 1551, 1663
MlyI	GAGTC	3 cut(s)	673, 1870, 2115
MmeI	TCCRAC	4 cut(s)	231, 435, 667, 1636
MseI	TTAA	9 cut(s)	378, 567, 753, 822, 1038, 1332, 1422, 1512, 1766
MslI	CAYNNNNRTG	2 cut(s)	197, 495
MspA1I	CMGCKG	2 cut(s)	848, 1010
MspCI	CTTAAG	2 cut(s)	1331, 1421
MspI	CCGG	7 cut(s)	246, 641, 710, 785, 1754, 1881, 2121
MspR9I	CCNGG	6 cut(s)	247, 336, 995, 1754, 1881, 2121
Mva1269I	GAATGC	3 cut(s)	486, 1728, 1890
MvaI	CCWGG	2 cut(s)	336, 995
MvnI	CGCG	3 cut(s)	933, 935, 1010
NciI	CCSGG	4 cut(s)	247, 1754, 1881, 2121
NdeI	CATATG	1 cut(s)	1854
NdeII	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
NlaIII	CATG	7 cut(s)	1234, 1293, 1464, 1475, 1599, 1742, 2094
NlaIV	GGNNCC	2 cut(s)	330, 1794
NmuCI	GTSAC	2 cut(s)	1292, 1955
NspI	RCATGY	1 cut(s)	1293
PciSI	GCTCTTC	1 cut(s)	1539
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PctI	GAATGC	3 cut(s)	486, 1728, 1890
PfeI	GAWTC	5 cut(s)	853, 950, 1049, 1244, 1801
PfoI	TCCNGGA	2 cut(s)	334, 1879
PinAI	ACCGGT	1 cut(s)	784
PkrI	GCNGC	4 cut(s)	321, 363, 426, 776
PleI	GAGTC	3 cut(s)	672, 1870, 2114
PpsI	GAGTC	3 cut(s)	672, 1870, 2114
PshAI	GACNNNNGTC	1 cut(s)	2105
PsiI	TTATAA	1 cut(s)	588
Psp124BI	GAGCTC	1 cut(s)	1551
Psp6I	CCWGG	2 cut(s)	334, 993
PspEI	GGTNACC	1 cut(s)	143
PspGI	CCWGG	2 cut(s)	334, 993
PspN4I	GGNNCC	2 cut(s)	330, 1794
PspPI	GGNCC	2 cut(s)	462, 1080
PstI	CTGCAG	1 cut(s)	1029
PsuI	RGATCY	3 cut(s)	696, 1272, 1279
RsaI	GTAC	3 cut(s)	469, 675, 1465
RsaNI	GTAC	3 cut(s)	468, 674, 1464
RseI	CAYNNNNRTG	2 cut(s)	197, 495
SacI	GAGCTC	1 cut(s)	1551
SacII	CCGCGG	1 cut(s)	1011
SapI	GCTCTTC	1 cut(s)	1539
SaqAI	TTAA	9 cut(s)	378, 567, 753, 822, 1038, 1332, 1422, 1512, 1766
SatI	GCNGC	4 cut(s)	320, 362, 425, 775
Sau3AI	GATC	8 cut(s)	277, 696, 803, 1272, 1279, 1375, 1392, 1441
Sau96I	GGNCC	2 cut(s)	462, 1080
ScaI	AGTACT	1 cut(s)	469
SchI	GAGTC	3 cut(s)	673, 1870, 2115
ScrFI	CCNGG	6 cut(s)	247, 336, 995, 1754, 1881, 2121
SduI	GDGCHC	3 cut(s)	816, 1551, 1663
SfaNI	GCATC	6 cut(s)	133, 517, 1236, 1678, 1708, 2057
SfcI	CTRYAG	1 cut(s)	1025
Sfr303I	CCGCGG	1 cut(s)	1011
SgrBI	CCGCGG	1 cut(s)	1011
SinI	GGWCC	2 cut(s)	462, 1080
SmiMI	CAYNNNNRTG	2 cut(s)	197, 495
SmlI	CTYRAG	5 cut(s)	1331, 1421, 1823, 1889, 1993
SmoI	CTYRAG	5 cut(s)	1331, 1421, 1823, 1889, 1993
SpeI	ACTAGT	1 cut(s)	1150
SsiI	CCGC	8 cut(s)	349, 362, 440, 799, 848, 1008, 1010, 1624
SspI	AATATT	1 cut(s)	750
SspMI	CTAG	4 cut(s)	18, 1151, 1301, 1937
SstI	GAGCTC	1 cut(s)	1551
StyD4I	CCNGG	6 cut(s)	245, 334, 993, 1752, 1879, 2119
StyI	CCWWGG	1 cut(s)	138
TaaI	ACNGT	8 cut(s)	450, 480, 534, 593, 727, 818, 1555, 1969
TaiI	ACGT	3 cut(s)	813, 873, 1195
TaqI	TCGA	4 cut(s)	120, 517, 1213, 1413
TatI	WGTACW	2 cut(s)	467, 1463
TauI	GCSGC	1 cut(s)	364
TfiI	GAWTC	5 cut(s)	853, 950, 1049, 1244, 1801
Tru1I	TTAA	9 cut(s)	378, 567, 753, 822, 1038, 1332, 1422, 1512, 1766
Tru9I	TTAA	9 cut(s)	378, 567, 753, 822, 1038, 1332, 1422, 1512, 1766
TscAI	CASTG	3 cut(s)	199, 771, 1699
TseFI	GTSAC	2 cut(s)	1292, 1955
TseI	GCWGC	3 cut(s)	319, 424, 774
Tsp45I	GTSAC	2 cut(s)	1292, 1955
TspDTI	ATGAA	5 cut(s)	479, 1236, 1420, 1449, 1871
TspGWI	ACGGA	1 cut(s)	1700
TspRI	CASTG	3 cut(s)	199, 771, 1699
Vha464I	CTTAAG	2 cut(s)	1331, 1421
VneI	GTGCAC	1 cut(s)	812
VpaK11BI	GGWCC	2 cut(s)	462, 1080
XapI	RAATTY	5 cut(s)	49, 914, 1060, 1610, 2060
XbaI	TCTAGA	1 cut(s)	1300
XceI	RCATGY	1 cut(s)	1293
XspI	CTAG	4 cut(s)	18, 1151, 1301, 1937
ZrmI	AGTACT	1 cut(s)	469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.