Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0001713

Physical Location & Seq

Genomic Coordinates Forward (+)

25239334 .. 25243401

Gene Structure 4068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG260000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGAGGCGTCTCTGTCTAGTCTCAATTCCTATCCAAACTCGGAAAAAATTTCCTATCCAAACTCGGAAAAAATCTTGACCATTGAGTATGTCAGAGAGACCCTCATTCCCATACTCATCGAGCATCTCAACAAAGCCAAGGGTTACCTTTCCGATAACCACGCCAACAACAATGAGAGAGACAAACTTACCACTGAAATGGAAAAGCTACGCAAAGACCTCATTTTTATCAAGCAAGTTTTCACCGGATTGGACACTTTTGAAAAAAGCACAAGTGATCTTTTCAAGGTTCTCCAGCAACCAGAACACAGCCTGGAGCAGCTTTTGGAGCCTCCAGGAACGCAGACCCGCTTCCACGAGCCGCTTGCAAAGCAATTTAAGCCCAAGCTTGGAGTGCTTGGTGAGGTTATCATCAAACTGAAGCTGCTACTTCCATCACCGCACAAACTGTTGTTGGACAGGTCCAGTACTTTTCAACTGTCCAGCATTCATTCGGGTGGAGATGAGCATCTCAATCGATTGCTTGGCTTGCACTCAAGTGAGGTGTTCTATAAAAGCCAGGCTTTTAAAGACTTTCAGGATGTTTATAACAGTCTTGATGTTACTGCAAAGCTCTGCTTGCTGAGTTTCGCGGTGTTTCCGGCGAATGAGGTTCTAAAGAAGAGGCGTTTGGTACATTGGTGGGTTGTAGAAGAGATCCTCTACCCTCCAGTTGATGGTGAAAAGACGGTGGAGGAAATCGCTGATGGAATATTTGAAGTCTTAACAGTGAAGGGCTGCATTGAACCGGTCAAGAAGAAGTGGAGATCAGACGTGCACAGTTTTAAAATGCACCCTCTAGTTCGTTCAGCGGTGATTCGGATTGCCAAAGAGGTTGAGTTCTTAGATTTTGATGACAAAGGGAGACCAACTACTGAATTTTCAAGGTCTTATCGCGCGTGTTTGGTAAGTGGTTTTCAACTGAAATTGGCAAATAAAAAAGAGGAGGAATTAGAAAAACTGCAAACTATATTCAATGTGAACGATTCTTATCCGAATTTTTCCCAAGTGGAATGGTCCAAGTTGAAGAATGTGAAGGTTCTTTATCTTGGAAGGTGGCACAGCAGGGCTAAACATCACATTGAACTAGTTGACAGCAATTTCTTGGAAGGGTTGAAATTTATGACACGTTTGAGGTTTCTCAGCCTTCGAGGAATATCGGGGATCATGGAGCTGCCTGATTCATTATGCAAGCTTGTTTGTTTGAAGATCTTGGATCTTGGAGCATGTCACAGTCTAGAGGTGCTTCCGAAAAAAATAAGCTTGCTTAAGAAGCTCACACACTTGGATATGTCCGAGTGTTACTTGCTGGATCGTATGCCTAAGGGGATCGGATCGCTCTCAGAACTCGAAGTTCTTAAGGGGTTCATAATTGGTGATCACAAGGAGAACACTTCATGTACTCTGCATGATTTGTCAGGATTGCAAAAGTTGAAAAAATTGACAATTAACACAAGCAGGGAGGATTTTCCCAACGAAGAAGAGCTAACCGTTTTAAAAGGATTTGGTTCGCTTCAAAAGCTAACAATAGCATGGGGAGGAGTAGACCTTCTTGCCAACCGCCAAAATAAGCATAGGAAGCAGGACAATGTTGGAGCAAAACCAAAAACAGCAAGCACAACGGATGCCAGTGGAGGTAACAGAAAAGAAGATGATGCTAATGGCATTAAAAATCCTGTGCCAAAAACCCCGGCAAGGTCATTAACCTTCAACGGAGGGGCTAAATTGGCTCCGAGGCGTCAGGAACATTTTGAAGTACTTGAGAAACTGGACTTGCAATGCTACCCTTGTATGAAAGCACCGACTTGGTTGACGCCCGGAATGCTCAAGAAGCTGGAAAAACTCTACATTAGAGGGGGACAGCTCCAAAGTCTAGGTCAAGTTCAAGAGAGTGACAAGTGGACAGTTGAGATATTGCGTTTGAAGTTCTTGAGTGAACTAAAGATGGATTGGAATGACCTCCAGTCAGCATTTCCAAAATTGAATTATGTGGAGAAATTTAGATGCCCTAAGACCACTTTCTTCCCATGCAATGAGACTGGAGTCTGGCTGAAGCCCGGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

701

Amino Acids

79.97

Weight (kDa)

8.92

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	212 - 282	3.1e-08	Disease resistance protein Winged helix domain
LRR_14	PF23598	351 - 524	3.1e-20	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45520 AT5G45520
fragaria_vesca	FvH4_6g22160 FvH4_6g22160
malus_domestica	MD10G1305300.v1.1 MD12G1056400.v1.1
prunus_persica	Prupe.4G034300_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078600_v2.0.a1
pyrus_communis	pycom10g25780 pycom12g04920
rosa_chinensis	RchiOBHm_Chr3g0479511 RchiOBHm_Chr5g0005761
rosa_laevigata	RLG00000023563
rosa_multiflora	Rmu_sc0004732.1_g000003 Rmu_sc0010248.1_g000001 Rmu_sc0014513.1_g000002
rosa_roxburghii	Rroxscaffold_1G00070100 Rroxscaffold_6G00402180
rosa_rugosa	Rorug03G0175900 Rorug03G0176000 Rorug03G0176100 Rorug03G0176200 Rorug04G0417900
rosa_samantha	Rh3AG226900 Rh3BG260000 Rh3CG234800 Rh3CG256900 Rh3DG252500 Rh5AG045400 Rh5BG044100 Rh5CG052900 Rh5DG043900
rosa_wichuraiana	Rw0G011120 Rw3G020270 Rw5G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	588
AccB7I	CCANNNNNTGG	1 cut(s)	716
AccI	GTMKAC	1 cut(s)	1584
AccII	CGCG	3 cut(s)	632, 936, 938
AciI	CCGC	6 cut(s)	349, 362, 440, 632, 851, 1600
AclWI	GGATC	6 cut(s)	691, 1211, 1263, 1359, 1376, 1381
AcsI	RAATTY	5 cut(s)	48, 917, 1036, 1157, 2036
AcuI	CTGAAG	1 cut(s)	440
AcyI	GRCGYC	3 cut(s)	8, 1777, 1853
AfaI	GTAC	4 cut(s)	469, 675, 1441, 1797
AfiI	CCNNNNNNNGG	3 cut(s)	389, 716, 1734
AflII	CTTAAG	2 cut(s)	1307, 1397
AflIII	ACRYGT	1 cut(s)	1166
AgeI	ACCGGT	1 cut(s)	787
AhdI	GACNNNNNGTC	1 cut(s)	2002
AhlI	ACTAGT	1 cut(s)	1126
AjiI	CACGTC	1 cut(s)	814
AjnI	CCWGG	3 cut(s)	312, 334, 558
AjuI	GAANNNNNNNTTGG	2 cut(s)	653, 685
AleI	CACNNNNGTG	1 cut(s)	537
Alw21I	GWGCWC	1 cut(s)	819
Alw26I	GTCTC	6 cut(s)	15, 26, 92, 174, 898, 2069
Alw44I	GTGCAC	1 cut(s)	815
AlwI	GGATC	6 cut(s)	691, 1211, 1263, 1359, 1376, 1381
ApaLI	GTGCAC	1 cut(s)	815
ApeKI	GCWGC	4 cut(s)	319, 424, 777, 1213
ApoI	RAATTY	5 cut(s)	48, 917, 1036, 1157, 2036
ArsI	GACNNNNNNTTYG	2 cut(s)	1900, 1932
AsiGI	ACCGGT	1 cut(s)	787
AspLEI	GCGC	1 cut(s)	938
AspS9I	GGNCC	2 cut(s)	462, 1056
AsuC2I	CCSGG	3 cut(s)	1730, 1857, 2097
AsuHPI	GGTGA	6 cut(s)	235, 413, 429, 731, 865, 1427
AvaII	GGWCC	2 cut(s)	462, 1056
AxyI	CCTNAGG	1 cut(s)	1362
BaeGI	GKGCMC	1 cut(s)	819
BaeI	ACNNNNGTAYC	2 cut(s)	665, 698
BauI	CACGAG	1 cut(s)	356
Bbv12I	GWGCWC	1 cut(s)	819
BbvI	GCAGC	4 cut(s)	331, 411, 764, 1200
BccI	CCATC	4 cut(s)	442, 710, 740, 1978
BcgI	CGANNNNNNTGC	4 cut(s)	347, 381, 497, 531
BciT130I	CCWGG	3 cut(s)	314, 336, 560
BclI	TGATCA	1 cut(s)	1417
BcnI	CCSGG	3 cut(s)	1730, 1857, 2097
BcoDI	GTCTC	6 cut(s)	15, 26, 92, 174, 898, 2069
BcuI	ACTAGT	1 cut(s)	1126
BfaI	CTAG	5 cut(s)	18, 839, 1127, 1277, 1913
BfrI	CTTAAG	2 cut(s)	1307, 1397
BglII	AGATCT	1 cut(s)	1248
BisI	GCNGC	5 cut(s)	320, 362, 425, 778, 1214
BlsI	GCNGC	5 cut(s)	321, 363, 426, 779, 1215
BmcAI	AGTACT	2 cut(s)	469, 1797
Bme1390I	CCNGG	6 cut(s)	314, 336, 560, 1730, 1857, 2097
Bme18I	GGWCC	2 cut(s)	462, 1056
BmeRI	GACNNNNNGTC	1 cut(s)	2002
BmgBI	CACGTC	1 cut(s)	814
BmgT120I	GGNCC	2 cut(s)	462, 1056
BmiI	GGNNCC	2 cut(s)	330, 1770
BmrFI	CCNGG	6 cut(s)	314, 336, 560, 1730, 1857, 2097
BmsI	GCATC	5 cut(s)	133, 517, 1654, 1684, 2033
BoxI	GACNNNNGTC	1 cut(s)	2081
BplI	GAGNNNNNCTC	2 cut(s)	87, 119
BpmI	CTGGAG	6 cut(s)	278, 318, 335, 693, 1985, 2100
BpuEI	CTTGAG	4 cut(s)	520, 1820, 1850, 1990
BpuMI	CCSGG	3 cut(s)	1730, 1857, 2097
Bsa29I	ATCGAT	1 cut(s)	517
BsaBI	GATNNNNATC	2 cut(s)	507, 1029
BsaHI	GRCGYC	3 cut(s)	8, 1777, 1853
BsaI	GGTCTC	2 cut(s)	92, 898
BsaJI	CCNNGG	3 cut(s)	138, 1728, 1772
BsaWI	WCCGGW	2 cut(s)	245, 787
Bsc4I	CCNNNNNNNGG	3 cut(s)	389, 716, 1734
Bse118I	RCCGGY	1 cut(s)	787
Bse1I	ACTGG	6 cut(s)	465, 710, 1668, 1812, 2002, 2083
Bse21I	CCTNAGG	1 cut(s)	1362
Bse3DI	GCAATG	2 cut(s)	1823, 2077
Bse8I	GATNNNNATC	2 cut(s)	507, 1029
BseBI	CCWGG	3 cut(s)	314, 336, 560
BseCI	ATCGAT	1 cut(s)	517
BseDI	CCNNGG	3 cut(s)	138, 1728, 1772
BseGI	GGATG	2 cut(s)	586, 1669
BseJI	GATNNNNATC	2 cut(s)	507, 1029
BseLI	CCNNNNNNNGG	3 cut(s)	389, 716, 1734
BseMI	GCAATG	2 cut(s)	1823, 2077
BseMII	CTCAG	3 cut(s)	614, 1195, 1395
BseNI	ACTGG	6 cut(s)	465, 710, 1668, 1812, 2002, 2083
BseRI	GAGGAG	2 cut(s)	998, 1593
BseSI	GKGCMC	1 cut(s)	819
BseXI	GCAGC	4 cut(s)	331, 411, 764, 1200
Bsh1236I	CGCG	3 cut(s)	632, 936, 938
BshTI	ACCGGT	1 cut(s)	787
BshVI	ATCGAT	1 cut(s)	517
BsiHKAI	GWGCWC	1 cut(s)	819
BsiSI	CCGG	6 cut(s)	246, 641, 788, 1730, 1857, 2097
BslFI	GGGAC	1 cut(s)	1911
BslI	CCNNNNNNNGG	3 cut(s)	389, 716, 1734
BsmAI	GTCTC	6 cut(s)	15, 26, 92, 174, 898, 2069
BsmBI	CGTCTC	1 cut(s)	15
BsmFI	GGGAC	1 cut(s)	1911
BsmI	GAATGC	2 cut(s)	486, 1866
Bso31I	GGTCTC	2 cut(s)	92, 898
Bsp1286I	GDGCHC	1 cut(s)	819
BspACI	CCGC	6 cut(s)	349, 362, 440, 632, 851, 1600
BspCNI	CTCAG	3 cut(s)	615, 1194, 1394
BspDI	ATCGAT	1 cut(s)	517
BspFNI	CGCG	3 cut(s)	632, 936, 938
BspLI	GGNNCC	2 cut(s)	330, 1770
BspPI	GGATC	6 cut(s)	691, 1211, 1263, 1359, 1376, 1381
BspQI	GCTCTTC	1 cut(s)	1515
BspTI	CTTAAG	2 cut(s)	1307, 1397
BspTNI	GGTCTC	2 cut(s)	92, 898
BsrDI	GCAATG	2 cut(s)	1823, 2077
BsrFI	RCCGGY	1 cut(s)	787
BsrI	ACTGG	6 cut(s)	465, 710, 1668, 1812, 2002, 2083
BssAI	RCCGGY	1 cut(s)	787
BssECI	CCNNGG	3 cut(s)	138, 1728, 1772
BssNI	GRCGYC	3 cut(s)	8, 1777, 1853
BssSI	CACGAG	1 cut(s)	356
BssT1I	CCWWGG	1 cut(s)	138
Bst2BI	CACGAG	1 cut(s)	356
Bst2UI	CCWGG	3 cut(s)	314, 336, 560
Bst4CI	ACNGT	9 cut(s)	450, 480, 593, 730, 769, 821, 1274, 1531, 1945
Bst6I	CTCTTC	3 cut(s)	656, 687, 1515
BstACI	GRCGYC	3 cut(s)	8, 1777, 1853
BstAFI	CTTAAG	2 cut(s)	1307, 1397
BstC8I	GCNNGC	6 cut(s)	366, 530, 620, 1232, 1304, 1654
BstDEI	CTNAG	6 cut(s)	623, 883, 1181, 1362, 1381, 2049
BstEII	GGTNACC	1 cut(s)	143
BstF5I	GGATG	2 cut(s)	586, 1669
BstFNI	CGCG	3 cut(s)	632, 936, 938
BstHHI	GCGC	1 cut(s)	938
BstMAI	GTCTC	6 cut(s)	15, 26, 92, 174, 898, 2069
BstNI	CCWGG	3 cut(s)	314, 336, 560
BstNSI	RCATGY	1 cut(s)	1269
BstPAI	GACNNNNGTC	1 cut(s)	2081
BstPI	GGTNACC	1 cut(s)	143
BstSCI	CCNGG	6 cut(s)	312, 334, 558, 1728, 1855, 2095
BstSLI	GKGCMC	1 cut(s)	819
BstUI	CGCG	3 cut(s)	632, 936, 938
BstV1I	GCAGC	4 cut(s)	331, 411, 764, 1200
BstX2I	RGATCY	3 cut(s)	696, 1248, 1255
BstXI	CCANNNNNNTGG	1 cut(s)	199
BstYI	RGATCY	3 cut(s)	696, 1248, 1255
Bsu15I	ATCGAT	1 cut(s)	517
Bsu36I	CCTNAGG	1 cut(s)	1362
BsuTUI	ATCGAT	1 cut(s)	517
BtrI	CACGTC	1 cut(s)	814
BtsCI	GGATG	2 cut(s)	586, 1669
BtsIMutI	CAGTG	3 cut(s)	192, 774, 1675
Cac8I	GCNNGC	6 cut(s)	366, 530, 620, 1232, 1304, 1654
CfoI	GCGC	1 cut(s)	938
Cfr10I	RCCGGY	1 cut(s)	787
Cfr13I	GGNCC	2 cut(s)	462, 1056
ClaI	ATCGAT	1 cut(s)	517
CseI	GACGC	2 cut(s)	1766, 1861
Csp6I	GTAC	4 cut(s)	468, 674, 1440, 1796
CspAI	ACCGGT	1 cut(s)	787
CviAII	CATG	6 cut(s)	1207, 1266, 1437, 1448, 1572, 2067
CviQI	GTAC	4 cut(s)	468, 674, 1440, 1796
DdeI	CTNAG	6 cut(s)	623, 883, 1181, 1362, 1381, 2049
DraI	TTTAAA	3 cut(s)	568, 826, 1536
DriI	GACNNNNNGTC	1 cut(s)	2002
Eam1104I	CTCTTC	3 cut(s)	656, 687, 1515
Eam1105I	GACNNNNNGTC	1 cut(s)	2002
EarI	CTCTTC	3 cut(s)	656, 687, 1515
Eco130I	CCWWGG	1 cut(s)	138
Eco31I	GGTCTC	2 cut(s)	92, 898
Eco47I	GGWCC	2 cut(s)	462, 1056
Eco57I	CTGAAG	1 cut(s)	440
Eco81I	CCTNAGG	1 cut(s)	1362
Eco91I	GGTNACC	1 cut(s)	143
EcoO65I	GGTNACC	1 cut(s)	143
EcoRII	CCWGG	3 cut(s)	312, 334, 558
EcoT14I	CCWWGG	1 cut(s)	138
ErhI	CCWWGG	1 cut(s)	138
Esp3I	CGTCTC	1 cut(s)	15
FaeI	CATG	6 cut(s)	1210, 1269, 1440, 1451, 1575, 2070
FalI	AAGNNNNNCTT	4 cut(s)	547, 579, 602, 634
FaqI	GGGAC	1 cut(s)	1911
FatI	CATG	6 cut(s)	1206, 1265, 1436, 1447, 1571, 2066
FauI	CCCGC	1 cut(s)	356
FbaI	TGATCA	1 cut(s)	1417
FblI	GTMKAC	1 cut(s)	1584
Fnu4HI	GCNGC	5 cut(s)	320, 362, 425, 778, 1214
FokI	GGATG	2 cut(s)	593, 1676
Fsp4HI	GCNGC	5 cut(s)	320, 362, 425, 778, 1214
FspBI	CTAG	5 cut(s)	18, 839, 1127, 1277, 1913
GlaI	GCGC	1 cut(s)	937
GluI	GCNGC	5 cut(s)	320, 362, 425, 778, 1214
GsuI	CTGGAG	6 cut(s)	278, 318, 335, 693, 1985, 2100
HapII	CCGG	6 cut(s)	246, 641, 788, 1730, 1857, 2097
HgaI	GACGC	2 cut(s)	1766, 1861
HhaI	GCGC	1 cut(s)	938
Hin1I	GRCGYC	3 cut(s)	8, 1777, 1853
Hin1II	CATG	6 cut(s)	1210, 1269, 1440, 1451, 1575, 2070
Hin6I	GCGC	1 cut(s)	936
HinP1I	GCGC	1 cut(s)	936
HincII	GTYRAC	2 cut(s)	1132, 1851
HindII	GTYRAC	2 cut(s)	1132, 1851
HindIII	AAGCTT	3 cut(s)	386, 1232, 1300
HinfI	GANTC	4 cut(s)	856, 1025, 1220, 2082
HpaII	CCGG	6 cut(s)	246, 641, 788, 1730, 1857, 2097
HphI	GGTGA	6 cut(s)	235, 413, 429, 731, 865, 1427
Hpy166II	GTNNAC	7 cut(s)	817, 1021, 1132, 1585, 1851, 1941, 1976
Hpy8I	GTNNAC	7 cut(s)	817, 1021, 1132, 1585, 1851, 1941, 1976
HpyAV	CCTTC	7 cut(s)	766, 1069, 1086, 1142, 1196, 1598, 1756
HpyCH4III	ACNGT	9 cut(s)	450, 480, 593, 730, 769, 821, 1274, 1531, 1945
HpyCH4IV	ACGT	2 cut(s)	813, 1168
HpyF3I	CTNAG	6 cut(s)	623, 883, 1181, 1362, 1381, 2049
HpySE526I	ACGT	2 cut(s)	813, 1168
Hsp92I	GRCGYC	3 cut(s)	8, 1777, 1853
Hsp92II	CATG	6 cut(s)	1210, 1269, 1440, 1451, 1575, 2070
HspAI	GCGC	1 cut(s)	936
Ksp22I	TGATCA	1 cut(s)	1417
LguI	GCTCTTC	1 cut(s)	1515
LmnI	GCTCC	7 cut(s)	316, 328, 1210, 1262, 1634, 1774, 1908
Lsp1109I	GCAGC	4 cut(s)	331, 411, 764, 1200
LweI	GCATC	5 cut(s)	133, 517, 1654, 1684, 2033
MaeI	CTAG	5 cut(s)	18, 839, 1127, 1277, 1913
MaeII	ACGT	2 cut(s)	813, 1168
MaeIII	GTNAC	6 cut(s)	143, 601, 1268, 1340, 1676, 1931
MboII	GAAGA	9 cut(s)	673, 704, 808, 1078, 1258, 1529, 1532, 1700, 2053
MflI	RGATCY	3 cut(s)	696, 1248, 1255
MhlI	GDGCHC	1 cut(s)	819
MlyI	GAGTC	1 cut(s)	2091
MmeI	TCCRAC	2 cut(s)	435, 1612
MslI	CAYNNNNRTG	3 cut(s)	197, 495, 537
MspA1I	CMGCKG	1 cut(s)	851
MspCI	CTTAAG	2 cut(s)	1307, 1397
MspI	CCGG	6 cut(s)	246, 641, 788, 1730, 1857, 2097
MspR9I	CCNGG	6 cut(s)	314, 336, 560, 1730, 1857, 2097
Mva1269I	GAATGC	2 cut(s)	486, 1866
MvaI	CCWGG	3 cut(s)	314, 336, 560
MvnI	CGCG	3 cut(s)	632, 936, 938
NciI	CCSGG	3 cut(s)	1730, 1857, 2097
NlaIII	CATG	6 cut(s)	1210, 1269, 1440, 1451, 1575, 2070
NlaIV	GGNNCC	2 cut(s)	330, 1770
NmuCI	GTSAC	2 cut(s)	1268, 1931
NspI	RCATGY	1 cut(s)	1269
OliI	CACNNNNGTG	1 cut(s)	537
PciSI	GCTCTTC	1 cut(s)	1515
PctI	GAATGC	2 cut(s)	486, 1866
PfeI	GAWTC	3 cut(s)	856, 1025, 1220
PflMI	CCANNNNNTGG	1 cut(s)	716
PfoI	TCCNGGA	1 cut(s)	334
PinAI	ACCGGT	1 cut(s)	787
PkrI	GCNGC	5 cut(s)	321, 363, 426, 779, 1215
PleI	GAGTC	1 cut(s)	2090
PpsI	GAGTC	1 cut(s)	2090
PshAI	GACNNNNGTC	1 cut(s)	2081
PsiI	TTATAA	1 cut(s)	588
Psp6I	CCWGG	3 cut(s)	312, 334, 558
PspEI	GGTNACC	1 cut(s)	143
PspGI	CCWGG	3 cut(s)	312, 334, 558
PspN4I	GGNNCC	2 cut(s)	330, 1770
PspPI	GGNCC	2 cut(s)	462, 1056
PsuI	RGATCY	3 cut(s)	696, 1248, 1255
RsaI	GTAC	4 cut(s)	469, 675, 1441, 1797
RsaNI	GTAC	4 cut(s)	468, 674, 1440, 1796
RseI	CAYNNNNRTG	3 cut(s)	197, 495, 537
SapI	GCTCTTC	1 cut(s)	1515
SatI	GCNGC	5 cut(s)	320, 362, 425, 778, 1214
Sau96I	GGNCC	2 cut(s)	462, 1056
ScaI	AGTACT	2 cut(s)	469, 1797
SchI	GAGTC	1 cut(s)	2091
ScrFI	CCNGG	6 cut(s)	314, 336, 560, 1730, 1857, 2097
SduI	GDGCHC	1 cut(s)	819
SfaNI	GCATC	5 cut(s)	133, 517, 1654, 1684, 2033
SinI	GGWCC	2 cut(s)	462, 1056
SmiMI	CAYNNNNRTG	3 cut(s)	197, 495, 537
SmlI	CTYRAG	6 cut(s)	535, 1307, 1397, 1799, 1865, 1969
SmoI	CTYRAG	6 cut(s)	535, 1307, 1397, 1799, 1865, 1969
SpeI	ACTAGT	1 cut(s)	1126
SsiI	CCGC	6 cut(s)	349, 362, 440, 632, 851, 1600
SspI	AATATT	1 cut(s)	753
SspMI	CTAG	5 cut(s)	18, 839, 1127, 1277, 1913
StyD4I	CCNGG	6 cut(s)	312, 334, 558, 1728, 1855, 2095
StyI	CCWWGG	1 cut(s)	138
TaaI	ACNGT	9 cut(s)	450, 480, 593, 730, 769, 821, 1274, 1531, 1945
TaiI	ACGT	2 cut(s)	816, 1171
TaqI	TCGA	4 cut(s)	120, 517, 1189, 1389
TatI	WGTACW	3 cut(s)	467, 1439, 1795
TauI	GCSGC	1 cut(s)	364
TfiI	GAWTC	3 cut(s)	856, 1025, 1220
TscAI	CASTG	3 cut(s)	199, 774, 1675
TseFI	GTSAC	2 cut(s)	1268, 1931
TseI	GCWGC	4 cut(s)	319, 424, 777, 1213
Tsp45I	GTSAC	2 cut(s)	1268, 1931
TspDTI	ATGAA	5 cut(s)	479, 1212, 1396, 1425, 1847
TspGWI	ACGGA	2 cut(s)	1676, 1767
TspRI	CASTG	3 cut(s)	199, 774, 1675
Van91I	CCANNNNNTGG	1 cut(s)	716
Vha464I	CTTAAG	2 cut(s)	1307, 1397
VneI	GTGCAC	1 cut(s)	815
VpaK11BI	GGWCC	2 cut(s)	462, 1056
XapI	RAATTY	5 cut(s)	48, 917, 1036, 1157, 2036
XbaI	TCTAGA	1 cut(s)	1276
XceI	RCATGY	1 cut(s)	1269
XmiI	GTMKAC	1 cut(s)	1584
XspI	CTAG	5 cut(s)	18, 839, 1127, 1277, 1913
ZrmI	AGTACT	2 cut(s)	469, 1797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.