Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0001713

Physical Location & Seq

Genomic Coordinates Forward (+)

25070245 .. 25074318

Gene Structure 4074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG256900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGTCAGAGAAACCCTCATCCCCAAACTCATCGAGTATGTTGCCCATTGTGTTTGTCAGAGAAACCTGCATTCCCAAACTCATCCGGCATCTGACAGATGCCCAGAGTTACCTTTCCGATAAACACGCCGACAACAATGAAGCATCCAAATTTACTATTGAAATGGAAAAGCTACGCAAAGACCTCATTTTTATCAGGCAAGTTTTCACCGGATTGGACACTTTTGAAAAAAGCACAAGTGATCTTTTCAAGGTTCTCCAACAACCAGAACACAGCCTGGAGCAGCTTTTGGAGCCTCCAGGAAAGCAGACCGGCTTCTACGAGCTTTCAAAGCGATTTGAGCCCAAGCTTGCAGTGCTTGGTGAGGTTATCATGAAACTGAAGCTGCTACTTCCATCACCGCACAAACTGTTGTTGGACAGGTCCAGTACTCTTCAACTGTCCAGCATTCATTTGGGTGGAGGTGAGCATCTCAATGAATTGCATGGCTTACACTCAAGTGAGGTGTTCTATAAAAGCCAGGCTTTTAAAGACTTTCAGGATGTTTATAACAGTCTTGGTGTTACTGCAAAGCTCTGCTTGCTGAGTTTCTCGGTGTTTCCGGCGAATGAGGTTCTAAAGAAAAGGCGTTTGGTACATTGGTGGGTTGGAGAAGAGATCCTCTACCCTCCGGTTGATAGTGAGACGGTGGAGGAAATTGCTGATGGAATATTTAAAGACTTAACAGTGAAGGGCTGCATTGAACCGGTCAAGAAGAAGCAGAGATCAGACGTGCACAGTTTTAAAATGCACCCTCTAATTCGTTCAGCGGTGATTCGGCTTGCCAAAGACGTTGAGTTCTTAGATTTTGATGACAAAGGGAGACTAACTACTGAATTTTCAAAGTCTTATCGCGCGTGTTTGGTAAGTGATTCTGAACTGGTAGGTTCTCAACTGAAATCGGCAAATAAAACCCAGGTGGAAATAACCGCGGAATTAGAAAAACTGCAGACTATATTCAATGTGAACGATTCTTATCCGAATTTTTCCCAAATGGAATGGTCCAAATTGAAGAATGTGAAGGTTCTTTATCTTGGAAGGTGGCACAGCAGGGCAAAACATCACATTGAACTAGTTGACAGCAAGTTCTTGGAAGCGTTGGTGTTTATGACACGTTTGAGGTTTCTCAGCCTTCGAGGAATATCGGGGATCATGGAGCTTCCTGATTCATTATGCAAGCTTGTTTGTTTGAAGATCTTGGATCTTGGAGCATGTCACAATCTAGAGGTGATTCCGAAACAAATAAGCTTGCTTAAGAAGCTCACACACTTGGATATGTCCGAGTGTTACTTACTGGATCGTATGCCTAAGGGGATCGCATTGCTCTCAGAACTCGAAGTTCTTAAGGGGTTCATAATTGGTGATCACAAGAAGCACACTTCATGTACTCTGCATGATTTGTCAGGATTGCAAAAGTTGAAAAAATTGACAATTAACACAAGCAGGGAGGATTTTCCCAACGAAGAAGAGCTAACCGTTTTACAAGGATTTGGTTCGCTTCAAAAGCTAACAATAGCATGGGGAGGAGTAGAATTTCTTGCCAACCGCCAAAATAAGCATAGGAAGCAGGACAATGTTGGAGCACAACCAAAAGCAGCAAGCACAACGGATGCCAGTGGAGGTAACAGAAATGAAGATGATGCTAATGGTATTCAAAATCATGTGCCAAAAACCCCGGCAAGGTCATTAACCTTCAAGCGAAGGGCTATATTGGCTCCGAGGATTCGGGAACATTTTGAAGCACTTGAGAAACTGGACTTGCAATGCTACCCTCATATGAAAGCACCGACTTGGTTGACTCCCGGAATGCTCAAGAAGCTGGAAAAACTCTACATTAGAGGGGGACAGCTCCAAAGTCTAGGTCAAGTTCAGGAGAGTGACAAGTGGACAGTTGAGATATTGCGTTTGAAGTTCTTGAGTGAACTAAAGATGGATTGGAATGACCTCCAGTCAGCATTTCCAAAATTGAATTATGTGGAGAAATTTAGATGCCCTAAGACCACTTTCTTCCCATGCGATGAGACTGGAGTCTGGCTGAAACCCGGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

696

Amino Acids

79.31

Weight (kDa)

8.79

Isoelectric Point (pI)

49.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	199 - 268	1.3e-09	Disease resistance protein Winged helix domain
LRR_14	PF23598	345 - 519	1.4e-17	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45520 AT5G45520
fragaria_vesca	FvH4_6g22160 FvH4_6g22160
malus_domestica	MD10G1305300.v1.1 MD12G1056400.v1.1
prunus_persica	Prupe.4G034300_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078600_v2.0.a1
pyrus_communis	pycom10g25780 pycom12g04920
rosa_chinensis	RchiOBHm_Chr3g0479511 RchiOBHm_Chr5g0005761
rosa_laevigata	RLG00000023563
rosa_multiflora	Rmu_sc0004732.1_g000003 Rmu_sc0010248.1_g000001 Rmu_sc0014513.1_g000002
rosa_roxburghii	Rroxscaffold_1G00070100 Rroxscaffold_6G00402180
rosa_rugosa	Rorug03G0175900 Rorug03G0176000 Rorug03G0176100 Rorug03G0176200 Rorug04G0417900
rosa_samantha	Rh3AG226900 Rh3BG260000 Rh3CG234800 Rh3CG256900 Rh3DG252500 Rh5AG045400 Rh5BG044100 Rh5CG052900 Rh5DG043900
rosa_wichuraiana	Rw0G011120 Rw3G020270 Rw5G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	549
Acc36I	ACCTGC	1 cut(s)	74
AccII	CGCG	3 cut(s)	894, 896, 971
AciI	CCGC	5 cut(s)	401, 809, 969, 971, 1585
AclWI	GGATC	5 cut(s)	652, 1196, 1248, 1344, 1361
AcsI	RAATTY	5 cut(s)	149, 875, 1021, 1571, 2021
AcuI	CTGAAG	1 cut(s)	401
AfaI	GTAC	3 cut(s)	430, 636, 1426
AfiI	CCNNNNNNNGG	1 cut(s)	1719
AflII	CTTAAG	2 cut(s)	1292, 1382
AflIII	ACRYGT	1 cut(s)	1151
AgeI	ACCGGT	1 cut(s)	745
AhdI	GACNNNNNGTC	1 cut(s)	1987
AhlI	ACTAGT	1 cut(s)	1111
AjiI	CACGTC	1 cut(s)	772
AjnI	CCWGG	4 cut(s)	276, 298, 519, 954
AjuI	GAANNNNNNNTTGG	2 cut(s)	614, 646
AleI	CACNNNNGTG	1 cut(s)	498
Alw21I	GWGCWC	2 cut(s)	777, 1624
Alw26I	GTCTC	3 cut(s)	677, 856, 2054
Alw44I	GTGCAC	1 cut(s)	773
AlwI	GGATC	5 cut(s)	652, 1196, 1248, 1344, 1361
ApaLI	GTGCAC	1 cut(s)	773
ApeKI	GCWGC	4 cut(s)	283, 385, 735, 1634
ApoI	RAATTY	5 cut(s)	149, 875, 1021, 1571, 2021
ArsI	GACNNNNNNTTYG	2 cut(s)	1885, 1917
AsiGI	ACCGGT	1 cut(s)	745
AspLEI	GCGC	1 cut(s)	896
AspS9I	GGNCC	2 cut(s)	423, 1041
AsuC2I	CCSGG	3 cut(s)	1715, 1842, 2082
AsuHPI	GGTGA	7 cut(s)	199, 374, 390, 476, 823, 1279, 1412
AvaII	GGWCC	2 cut(s)	423, 1041
AxyI	CCTNAGG	1 cut(s)	1347
BaeGI	GKGCMC	1 cut(s)	777
BaeI	ACNNNNGTAYC	2 cut(s)	626, 659
BanII	GRGCYC	1 cut(s)	345
Bbv12I	GWGCWC	2 cut(s)	777, 1624
BbvI	GCAGC	4 cut(s)	295, 372, 722, 1646
BccI	CCATC	3 cut(s)	403, 698, 1963
BcgI	CGANNNNNNTGC	2 cut(s)	22, 56
BciT130I	CCWGG	4 cut(s)	278, 300, 521, 956
BclI	TGATCA	1 cut(s)	1402
BcnI	CCSGG	3 cut(s)	1715, 1842, 2082
BcoDI	GTCTC	3 cut(s)	677, 856, 2054
BcuI	ACTAGT	1 cut(s)	1111
BfaI	CTAG	3 cut(s)	1112, 1262, 1898
BfmI	CTRYAG	1 cut(s)	986
BfrI	CTTAAG	2 cut(s)	1292, 1382
BfuAI	ACCTGC	1 cut(s)	74
BglII	AGATCT	1 cut(s)	1233
BisI	GCNGC	4 cut(s)	284, 386, 736, 1635
BlsI	GCNGC	4 cut(s)	285, 387, 737, 1636
BmcAI	AGTACT	1 cut(s)	430
Bme1390I	CCNGG	7 cut(s)	278, 300, 521, 956, 1715, 1842, 2082
Bme18I	GGWCC	2 cut(s)	423, 1041
BmeRI	GACNNNNNGTC	1 cut(s)	1987
BmgBI	CACGTC	1 cut(s)	772
BmgT120I	GGNCC	2 cut(s)	423, 1041
BmiI	GGNNCC	2 cut(s)	294, 1755
BmrFI	CCNGG	7 cut(s)	278, 300, 521, 956, 1715, 1842, 2082
BmsI	GCATC	7 cut(s)	88, 97, 152, 478, 1639, 1669, 2018
BoxI	GACNNNNGTC	1 cut(s)	2066
BplI	GAGNNNNNCTC	1 cut(s)	31
BpmI	CTGGAG	4 cut(s)	282, 299, 1970, 2085
BpuEI	CTTGAG	4 cut(s)	481, 1805, 1835, 1975
BpuMI	CCSGG	3 cut(s)	1715, 1842, 2082
BsaBI	GATNNNNATC	1 cut(s)	1014
BsaJI	CCNNGG	4 cut(s)	954, 969, 1713, 1757
BsaWI	WCCGGW	3 cut(s)	209, 670, 745
Bsc4I	CCNNNNNNNGG	1 cut(s)	1719
Bse118I	RCCGGY	2 cut(s)	311, 745
Bse1I	ACTGG	7 cut(s)	426, 924, 1338, 1653, 1797, 1987, 2068
Bse21I	CCTNAGG	1 cut(s)	1347
Bse3DI	GCAATG	2 cut(s)	1358, 1808
Bse8I	GATNNNNATC	1 cut(s)	1014
BseBI	CCWGG	4 cut(s)	278, 300, 521, 956
BseDI	CCNNGG	4 cut(s)	954, 969, 1713, 1757
BseGI	GGATG	5 cut(s)	17, 81, 143, 547, 1654
BseJI	GATNNNNATC	1 cut(s)	1014
BseLI	CCNNNNNNNGG	1 cut(s)	1719
BseMI	GCAATG	2 cut(s)	1358, 1808
BseMII	CTCAG	3 cut(s)	575, 1180, 1380
BseNI	ACTGG	7 cut(s)	426, 924, 1338, 1653, 1797, 1987, 2068
BseRI	GAGGAG	1 cut(s)	1578
BseSI	GKGCMC	1 cut(s)	777
BseXI	GCAGC	4 cut(s)	295, 372, 722, 1646
Bsh1236I	CGCG	3 cut(s)	894, 896, 971
BshTI	ACCGGT	1 cut(s)	745
BsiHKAI	GWGCWC	2 cut(s)	777, 1624
BsiSI	CCGG	9 cut(s)	85, 210, 312, 602, 671, 746, 1715, 1842, 2082
BslFI	GGGAC	1 cut(s)	1896
BslI	CCNNNNNNNGG	1 cut(s)	1719
BsmAI	GTCTC	3 cut(s)	677, 856, 2054
BsmBI	CGTCTC	1 cut(s)	677
BsmFI	GGGAC	1 cut(s)	1896
BsmI	GAATGC	3 cut(s)	69, 447, 1851
Bsp1286I	GDGCHC	3 cut(s)	345, 777, 1624
Bsp143I	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
BspACI	CCGC	5 cut(s)	401, 809, 969, 971, 1585
BspCNI	CTCAG	3 cut(s)	576, 1179, 1379
BspFNI	CGCG	3 cut(s)	894, 896, 971
BspHI	TCATGA	1 cut(s)	372
BspLI	GGNNCC	2 cut(s)	294, 1755
BspMAI	CTGCAG	1 cut(s)	990
BspMI	ACCTGC	1 cut(s)	74
BspPI	GGATC	5 cut(s)	652, 1196, 1248, 1344, 1361
BspQI	GCTCTTC	1 cut(s)	1500
BspTI	CTTAAG	2 cut(s)	1292, 1382
BsrDI	GCAATG	2 cut(s)	1358, 1808
BsrFI	RCCGGY	2 cut(s)	311, 745
BsrI	ACTGG	7 cut(s)	426, 924, 1338, 1653, 1797, 1987, 2068
BssAI	RCCGGY	2 cut(s)	311, 745
BssECI	CCNNGG	4 cut(s)	954, 969, 1713, 1757
BssMI	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
Bst2UI	CCWGG	4 cut(s)	278, 300, 521, 956
Bst4CI	ACNGT	8 cut(s)	411, 441, 554, 688, 727, 779, 1516, 1930
Bst6I	CTCTTC	3 cut(s)	438, 648, 1500
BstAFI	CTTAAG	2 cut(s)	1292, 1382
BstC8I	GCNNGC	6 cut(s)	351, 581, 822, 1217, 1289, 1639
BstDEI	CTNAG	6 cut(s)	584, 841, 1166, 1347, 1366, 2034
BstDSI	CCRYGG	1 cut(s)	969
BstF5I	GGATG	5 cut(s)	17, 81, 143, 547, 1654
BstFNI	CGCG	3 cut(s)	894, 896, 971
BstHHI	GCGC	1 cut(s)	896
BstKTI	GATC	9 cut(s)	244, 660, 767, 1191, 1236, 1243, 1339, 1356, 1405
BstMAI	GTCTC	3 cut(s)	677, 856, 2054
BstMBI	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
BstNI	CCWGG	4 cut(s)	278, 300, 521, 956
BstNSI	RCATGY	1 cut(s)	1254
BstPAI	GACNNNNGTC	1 cut(s)	2066
BstSCI	CCNGG	7 cut(s)	276, 298, 519, 954, 1713, 1840, 2080
BstSFI	CTRYAG	1 cut(s)	986
BstSLI	GKGCMC	1 cut(s)	777
BstUI	CGCG	3 cut(s)	894, 896, 971
BstV1I	GCAGC	4 cut(s)	295, 372, 722, 1646
BstX2I	RGATCY	3 cut(s)	657, 1233, 1240
BstYI	RGATCY	3 cut(s)	657, 1233, 1240
Bsu36I	CCTNAGG	1 cut(s)	1347
BtgI	CCRYGG	1 cut(s)	969
BtgZI	GCGATG	1 cut(s)	2070
BtrI	CACGTC	1 cut(s)	772
BtsCI	GGATG	5 cut(s)	17, 81, 143, 547, 1654
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	3 cut(s)	360, 732, 1660
BveI	ACCTGC	1 cut(s)	74
Cac8I	GCNNGC	6 cut(s)	351, 581, 822, 1217, 1289, 1639
CciI	TCATGA	1 cut(s)	372
CfoI	GCGC	1 cut(s)	896
Cfr10I	RCCGGY	2 cut(s)	311, 745
Cfr13I	GGNCC	2 cut(s)	423, 1041
Cfr42I	CCGCGG	1 cut(s)	972
Csp6I	GTAC	3 cut(s)	429, 635, 1425
CspAI	ACCGGT	1 cut(s)	745
CviAII	CATG	9 cut(s)	373, 485, 1192, 1251, 1422, 1433, 1557, 1700, 2052
CviQI	GTAC	3 cut(s)	429, 635, 1425
DdeI	CTNAG	6 cut(s)	584, 841, 1166, 1347, 1366, 2034
DpnI	GATC	9 cut(s)	243, 659, 766, 1190, 1235, 1242, 1338, 1355, 1404
DpnII	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
DraI	TTTAAA	3 cut(s)	529, 715, 784
DriI	GACNNNNNGTC	1 cut(s)	1987
Eam1104I	CTCTTC	3 cut(s)	438, 648, 1500
Eam1105I	GACNNNNNGTC	1 cut(s)	1987
EarI	CTCTTC	3 cut(s)	438, 648, 1500
Eco24I	GRGCYC	1 cut(s)	345
Eco47I	GGWCC	2 cut(s)	423, 1041
Eco57I	CTGAAG	1 cut(s)	401
Eco81I	CCTNAGG	1 cut(s)	1347
EcoRII	CCWGG	4 cut(s)	276, 298, 519, 954
EcoT38I	GRGCYC	1 cut(s)	345
Esp3I	CGTCTC	1 cut(s)	677
FaeI	CATG	9 cut(s)	376, 488, 1195, 1254, 1425, 1436, 1560, 1703, 2055
FalI	AAGNNNNNCTT	4 cut(s)	508, 540, 563, 595
FaqI	GGGAC	1 cut(s)	1896
FatI	CATG	9 cut(s)	372, 484, 1191, 1250, 1421, 1432, 1556, 1699, 2051
FauNDI	CATATG	1 cut(s)	1815
FbaI	TGATCA	1 cut(s)	1402
Fnu4HI	GCNGC	4 cut(s)	284, 386, 736, 1635
FokI	GGATG	5 cut(s)	4, 68, 130, 554, 1661
FriOI	GRGCYC	1 cut(s)	345
Fsp4HI	GCNGC	4 cut(s)	284, 386, 736, 1635
FspBI	CTAG	3 cut(s)	1112, 1262, 1898
GlaI	GCGC	1 cut(s)	895
GluI	GCNGC	4 cut(s)	284, 386, 736, 1635
GsuI	CTGGAG	4 cut(s)	282, 299, 1970, 2085
HapII	CCGG	9 cut(s)	85, 210, 312, 602, 671, 746, 1715, 1842, 2082
HhaI	GCGC	1 cut(s)	896
Hin1II	CATG	9 cut(s)	376, 488, 1195, 1254, 1425, 1436, 1560, 1703, 2055
Hin6I	GCGC	1 cut(s)	894
HinP1I	GCGC	1 cut(s)	894
HincII	GTYRAC	2 cut(s)	1117, 1836
HindII	GTYRAC	2 cut(s)	1117, 1836
HindIII	AAGCTT	3 cut(s)	347, 1217, 1285
HinfI	GANTC	8 cut(s)	814, 911, 1010, 1205, 1270, 1762, 1837, 2067
HpaII	CCGG	9 cut(s)	85, 210, 312, 602, 671, 746, 1715, 1842, 2082
HphI	GGTGA	7 cut(s)	199, 374, 390, 476, 823, 1279, 1412
Hpy166II	GTNNAC	6 cut(s)	775, 1006, 1117, 1836, 1926, 1961
Hpy8I	GTNNAC	6 cut(s)	775, 1006, 1117, 1836, 1926, 1961
HpyAV	CCTTC	6 cut(s)	724, 1054, 1071, 1181, 1734, 1741
HpyCH4III	ACNGT	8 cut(s)	411, 441, 554, 688, 727, 779, 1516, 1930
HpyCH4IV	ACGT	3 cut(s)	771, 831, 1153
HpyF3I	CTNAG	6 cut(s)	584, 841, 1166, 1347, 1366, 2034
HpySE526I	ACGT	3 cut(s)	771, 831, 1153
Hsp92II	CATG	9 cut(s)	376, 488, 1195, 1254, 1425, 1436, 1560, 1703, 2055
HspAI	GCGC	1 cut(s)	894
Ksp22I	TGATCA	1 cut(s)	1402
KspI	CCGCGG	1 cut(s)	972
Kzo9I	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
LguI	GCTCTTC	1 cut(s)	1500
LmnI	GCTCC	7 cut(s)	280, 292, 1195, 1247, 1619, 1759, 1893
Lsp1109I	GCAGC	4 cut(s)	295, 372, 722, 1646
LweI	GCATC	7 cut(s)	88, 97, 152, 478, 1639, 1669, 2018
MaeI	CTAG	3 cut(s)	1112, 1262, 1898
MaeII	ACGT	3 cut(s)	771, 831, 1153
MaeIII	GTNAC	6 cut(s)	107, 562, 1253, 1325, 1661, 1916
MalI	GATC	9 cut(s)	243, 659, 766, 1190, 1235, 1242, 1338, 1355, 1404
MboI	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
MboII	GAAGA	9 cut(s)	425, 665, 766, 1063, 1243, 1514, 1517, 1685, 2038
MflI	RGATCY	3 cut(s)	657, 1233, 1240
MhlI	GDGCHC	3 cut(s)	345, 777, 1624
MlyI	GAGTC	2 cut(s)	1831, 2076
MmeI	TCCRAC	4 cut(s)	283, 396, 628, 1597
MseI	TTAA	8 cut(s)	528, 714, 722, 783, 1293, 1383, 1473, 1727
MslI	CAYNNNNRTG	3 cut(s)	456, 474, 498
MspA1I	CMGCKG	2 cut(s)	809, 971
MspCI	CTTAAG	2 cut(s)	1292, 1382
MspI	CCGG	9 cut(s)	85, 210, 312, 602, 671, 746, 1715, 1842, 2082
MspR9I	CCNGG	7 cut(s)	278, 300, 521, 956, 1715, 1842, 2082
Mva1269I	GAATGC	3 cut(s)	69, 447, 1851
MvaI	CCWGG	4 cut(s)	278, 300, 521, 956
MvnI	CGCG	3 cut(s)	894, 896, 971
NciI	CCSGG	3 cut(s)	1715, 1842, 2082
NdeI	CATATG	1 cut(s)	1815
NdeII	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
NlaIII	CATG	9 cut(s)	376, 488, 1195, 1254, 1425, 1436, 1560, 1703, 2055
NlaIV	GGNNCC	2 cut(s)	294, 1755
NmuCI	GTSAC	2 cut(s)	1253, 1916
NspI	RCATGY	1 cut(s)	1254
OliI	CACNNNNGTG	1 cut(s)	498
PagI	TCATGA	1 cut(s)	372
PciSI	GCTCTTC	1 cut(s)	1500
PctI	GAATGC	3 cut(s)	69, 447, 1851
PfeI	GAWTC	6 cut(s)	814, 911, 1010, 1205, 1270, 1762
PfoI	TCCNGGA	2 cut(s)	298, 1840
PinAI	ACCGGT	1 cut(s)	745
PkrI	GCNGC	4 cut(s)	285, 387, 737, 1636
PleI	GAGTC	2 cut(s)	1831, 2075
PpsI	GAGTC	2 cut(s)	1831, 2075
PshAI	GACNNNNGTC	1 cut(s)	2066
PsiI	TTATAA	1 cut(s)	549
Psp6I	CCWGG	4 cut(s)	276, 298, 519, 954
PspGI	CCWGG	4 cut(s)	276, 298, 519, 954
PspN4I	GGNNCC	2 cut(s)	294, 1755
PspPI	GGNCC	2 cut(s)	423, 1041
PstI	CTGCAG	1 cut(s)	990
PsuI	RGATCY	3 cut(s)	657, 1233, 1240
RsaI	GTAC	3 cut(s)	430, 636, 1426
RsaNI	GTAC	3 cut(s)	429, 635, 1425
RseI	CAYNNNNRTG	3 cut(s)	456, 474, 498
SacII	CCGCGG	1 cut(s)	972
SapI	GCTCTTC	1 cut(s)	1500
SaqAI	TTAA	8 cut(s)	528, 714, 722, 783, 1293, 1383, 1473, 1727
SatI	GCNGC	4 cut(s)	284, 386, 736, 1635
Sau3AI	GATC	9 cut(s)	241, 657, 764, 1188, 1233, 1240, 1336, 1353, 1402
Sau96I	GGNCC	2 cut(s)	423, 1041
ScaI	AGTACT	1 cut(s)	430
SchI	GAGTC	2 cut(s)	1831, 2076
ScrFI	CCNGG	7 cut(s)	278, 300, 521, 956, 1715, 1842, 2082
SduI	GDGCHC	3 cut(s)	345, 777, 1624
SfaNI	GCATC	7 cut(s)	88, 97, 152, 478, 1639, 1669, 2018
SfcI	CTRYAG	1 cut(s)	986
Sfr303I	CCGCGG	1 cut(s)	972
SgrBI	CCGCGG	1 cut(s)	972
SinI	GGWCC	2 cut(s)	423, 1041
SmiMI	CAYNNNNRTG	3 cut(s)	456, 474, 498
SmlI	CTYRAG	6 cut(s)	496, 1292, 1382, 1784, 1850, 1954
SmoI	CTYRAG	6 cut(s)	496, 1292, 1382, 1784, 1850, 1954
SpeI	ACTAGT	1 cut(s)	1111
SsiI	CCGC	5 cut(s)	401, 809, 969, 971, 1585
SspI	AATATT	1 cut(s)	711
SspMI	CTAG	3 cut(s)	1112, 1262, 1898
StyD4I	CCNGG	7 cut(s)	276, 298, 519, 954, 1713, 1840, 2080
TaaI	ACNGT	8 cut(s)	411, 441, 554, 688, 727, 779, 1516, 1930
TaiI	ACGT	3 cut(s)	774, 834, 1156
TaqI	TCGA	3 cut(s)	32, 1174, 1374
TatI	WGTACW	2 cut(s)	428, 1424
TfiI	GAWTC	6 cut(s)	814, 911, 1010, 1205, 1270, 1762
Tru1I	TTAA	8 cut(s)	528, 714, 722, 783, 1293, 1383, 1473, 1727
Tru9I	TTAA	8 cut(s)	528, 714, 722, 783, 1293, 1383, 1473, 1727
TscAI	CASTG	3 cut(s)	360, 732, 1660
TseFI	GTSAC	2 cut(s)	1253, 1916
TseI	GCWGC	4 cut(s)	283, 385, 735, 1634
Tsp45I	GTSAC	2 cut(s)	1253, 1916
TspDTI	ATGAA	9 cut(s)	153, 389, 440, 492, 1197, 1381, 1410, 1686, 1832
TspGWI	ACGGA	1 cut(s)	1661
TspRI	CASTG	3 cut(s)	360, 732, 1660
Vha464I	CTTAAG	2 cut(s)	1292, 1382
VneI	GTGCAC	1 cut(s)	773
VpaK11BI	GGWCC	2 cut(s)	423, 1041
XapI	RAATTY	5 cut(s)	149, 875, 1021, 1571, 2021
XbaI	TCTAGA	1 cut(s)	1261
XceI	RCATGY	1 cut(s)	1254
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XspI	CTAG	3 cut(s)	1112, 1262, 1898
ZrmI	AGTACT	1 cut(s)	430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.