Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0001713

Physical Location & Seq

Genomic Coordinates Reverse (-)

6422689 .. 6424731

Gene Structure 2043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1056400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGTCTACTCCCAATTCCTCTGAAAATCCCAATGAAATCTTGTCCCTCGAGAGAATCAGAGAAACCATCATTCCCTCTCTCCTTGACCAATTCTCCCGGGCCAAATACTTCCTCTCCACCAGCCAATCTCACTCTGAAATGGCCAATCAATTTGAAAAATTACGCAAAGACCTCACTTACATCGAGCATGCATTCACCGGACTCAAGAACTTTGACGAAAGCGCGAGTAATCTTTTCAAGATCCTCCAACAGCCTCAACACAGCCTCAGCCACCTACTGGATCAGCTGTCAACGCGATCCCGCATCCTTGACTCACAAGCTAAGCAATTTCAGCCCAAACTGCGGGTGCTCAACGAGACCATCATCAAGCTGAAACTCCTACTTCCATCCCCACATAAACTTTTGTTGAGTAAGGAAAACTCTGTGTTGTCTACCGGCATTGACTTCCATCATCCCAACAAAGTGCTTGACAAATTGTCTGGCTTACACTTCAGTAAGGTGTTTGAAGAAAGCCCGGCTTATAAAGAATTTCAGGTTGTTTATAACAGTCTTCGTGTAACTACGAAGCTCTGTTTGTTGTGTTTCGCTGTGTTTCCTGTGAATGAGGTTGTAAAGAAGAGGGTTTTGATACAATGGTGGGTTGGAGAAGGGTTTGTGAATCCTCCGGTTGGTGGCAAAGAGACGGTTCTGGAAATTGCTGATGGTATATTTGAAGAATTAACAAAGAAGGGCTGCGTTGAACCTGTGAATAAGAAACGGAGACCTTCCGTGGTGCATAGTTTTAAAATGCACCCTATTATTCGTTCTGCGGTGATTGTTATTGCCAAAGAAGTGGGATTCTTTGATTTTGACAATAAAGGGAACCCCACAACCGAATTTTCATGGTCTCGACGTGCGTGTTTGATGGATGGTTCTCTGCCTCTGATGCAGGTAAGACCTCATGGGGATCCAGAAAACCTGCAGAGGAAGGATCCAGAAAACCTGCAGAGGAGGGATCCAGAAAACCTGCAGACGATATTCAATGTCAATGAGTCCTATCCAGATTTTTCCAAAGTGGAGTGGTCCAAGTTGAGGAATGTGAATGTTCTTTATCTTGGAAGGTGGCACAACAGAGCTAAGCATCACATTGAAGTAGATGACACCGAATTCTTCCAGGGGTTGCAGTATATGGTAAATTTGATATTCTTCAGTCTACGAGGAATATCGAGGATTATGGAGCTTCCTGATTCTGTATGCAAGCTTGTTAGTTTGAGGATCTTGGATCTCAGTGCCTGTCACAACTTAGAGGTACTTCCTGAAAAAATAGGCTTGCTTAAGAAGCTCACACACTTGGATATGTCCGAGTGTTACTTGCTAGAGCGTATGCCTAAGGGGATTGCGTTGCTCTCAGAACTCCAAGTTCTTAAAGGATTCATAATTCACGAATATCATAAGAATGATGCTTCATGTACTCTTCAGGATTTGTCAGCATTGCAGAAGTTGATGAAATTGACAATCAGCACTAGCAGGGAAGATTTTCCCAGCAAAGAAGAGCTAATTGATTTCCAACATCTTAAATCACTTCGAAAGCTGACAATAGTGTGGGGAGGGTTATCCATCCAAGCCAATGCTGCACAAGAACCGGTAGCACCAACTGGGACCAAAACTCATATGGGTAGAGTGCCATCAAGATTACCTACAGTCAAGAAAATGACCACGGCAACTACCATGATAAAGGAAAATCAAGAGTATTTTAAGGAACTTGAGAAGCTGGACCTTCAGTGCTATCCTCGGATGACAGCACCTAGCTGGTTGGTTCCCCGCAGGCTTAAGAGCCTGAAAATGCTCTACATTAGAGGAGGGCCGCTTCGAAATCTAGGTCATGCGGAGGAGAATGACAAGTGGACAGTTGAGATATTACGTCTGAAGTTCTTGAGTGAATTAAAGATGGACTGGAATGAACTGCAGATGTCATTTCCATGCTTAACATATGTGGAGAAATTTAGATGCCCTAGGCTCACTTTCTTCCCATGTGATGAGAGTGGAGTTTGCTTGAAGCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

681

Amino Acids

78.38

Weight (kDa)

8.97

Isoelectric Point (pI)

53.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	197 - 267	1.7e-08	Disease resistance protein Winged helix domain
LRR_14	PF23598	357 - 612	4.1e-16	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45520 AT5G45520
fragaria_vesca	FvH4_6g22160 FvH4_6g22160
malus_domestica	MD10G1305300.v1.1 MD12G1056400.v1.1
prunus_persica	Prupe.4G034300_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078600_v2.0.a1
pyrus_communis	pycom10g25780 pycom12g04920
rosa_chinensis	RchiOBHm_Chr3g0479511 RchiOBHm_Chr5g0005761
rosa_laevigata	RLG00000023563
rosa_multiflora	Rmu_sc0004732.1_g000003 Rmu_sc0010248.1_g000001 Rmu_sc0014513.1_g000002
rosa_roxburghii	Rroxscaffold_1G00070100 Rroxscaffold_6G00402180
rosa_rugosa	Rorug03G0175900 Rorug03G0176000 Rorug03G0176100 Rorug03G0176200 Rorug04G0417900
rosa_samantha	Rh3AG226900 Rh3BG260000 Rh3CG234800 Rh3CG256900 Rh3DG252500 Rh5AG045400 Rh5BG044100 Rh5CG052900 Rh5DG043900
rosa_wichuraiana	Rw0G011120 Rw3G020270 Rw5G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	522, 543
Acc36I	ACCTGC	4 cut(s)	919, 966, 990, 1014
AccB7I	CCANNNNNTGG	1 cut(s)	277
AccI	GTMKAC	3 cut(s)	5, 431, 1192
AccII	CGCG	2 cut(s)	224, 295
AciI	CCGC	6 cut(s)	301, 343, 809, 1801, 1844, 1865
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	5 cut(s)	527, 875, 1145, 1174, 1979
AcuI	CTGAAG	5 cut(s)	475, 1171, 1439, 1742, 1925
AfaI	GTAC	2 cut(s)	1290, 1450
AfiI	CCNNNNNNNGG	5 cut(s)	277, 342, 668, 671, 1071
AflII	CTTAAG	2 cut(s)	1313, 1808
AgeI	ACCGGT	1 cut(s)	1621
AgsI	TTSAA	8 cut(s)	155, 238, 506, 713, 740, 1021, 1130, 2035
AhdI	GACNNNNNGTC	1 cut(s)	475
AjiI	CACGTC	1 cut(s)	893
AjnI	CCWGG	1 cut(s)	1152
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	4 cut(s)	350, 674, 754, 891
AlwNI	CAGNNNCTG	1 cut(s)	1272
Ama87I	CYCGRG	2 cut(s)	47, 96
AoxI	GGCC	3 cut(s)	99, 141, 1841
ApeKI	GCWGC	2 cut(s)	732, 1610
ApoI	RAATTY	5 cut(s)	527, 875, 1145, 1174, 1979
ArsI	GACNNNNNNTTYG	2 cut(s)	1843, 1875
AsiGI	ACCGGT	1 cut(s)	1621
Asp700I	GAANNNNTTC	1 cut(s)	1515
AspA2I	CCTAGG	1 cut(s)	1991
AspLEI	GCGC	1 cut(s)	224
AspS9I	GGNCC	5 cut(s)	99, 1062, 1638, 1753, 1841
AsuC2I	CCSGG	3 cut(s)	97, 98, 515
AsuHPI	GGTGA	2 cut(s)	187, 823
AsuII	TTCGAA	2 cut(s)	1564, 1849
AvaI	CYCGRG	2 cut(s)	47, 96
AvaII	GGWCC	3 cut(s)	1062, 1638, 1753
AvrII	CCTAGG	1 cut(s)	1991
AxyI	CCTNAGG	1 cut(s)	1368
BaeI	ACNNNNGTAYC	2 cut(s)	620, 653
BalI	TGGCCA	1 cut(s)	143
BamHI	GGATCC	3 cut(s)	946, 970, 994
BbsI	GAAGAC	1 cut(s)	542
Bbv12I	GWGCWC	1 cut(s)	351
BbvCI	CCTCAGC	1 cut(s)	266
BbvI	GCAGC	2 cut(s)	719, 1597
BceAI	ACGGC	2 cut(s)	1713, 2023
BciT130I	CCWGG	1 cut(s)	1154
BcnI	CCSGG	3 cut(s)	97, 98, 515
BcoDI	GTCTC	4 cut(s)	350, 674, 754, 891
BfaI	CTAG	5 cut(s)	1355, 1503, 1785, 1856, 1992
BfmI	CTRYAG	5 cut(s)	959, 983, 1007, 1677, 1943
BfrI	CTTAAG	2 cut(s)	1313, 1808
BfuAI	ACCTGC	4 cut(s)	919, 966, 990, 1014
BisI	GCNGC	3 cut(s)	733, 1611, 1844
BlnI	CCTAGG	1 cut(s)	1991
BlpI	GCTNAGC	2 cut(s)	321, 1116
BlsI	GCNGC	3 cut(s)	734, 1612, 1845
Bme1390I	CCNGG	4 cut(s)	97, 98, 515, 1154
Bme18I	GGWCC	3 cut(s)	1062, 1638, 1753
BmeRI	GACNNNNNGTC	1 cut(s)	475
BmeT110I	CYCGRG	2 cut(s)	47, 96
BmgBI	CACGTC	1 cut(s)	893
BmgT120I	GGNCC	5 cut(s)	99, 1062, 1638, 1753, 1841
BmiI	GGNNCC	6 cut(s)	863, 948, 972, 996, 1639, 1797
BmrFI	CCNGG	4 cut(s)	97, 98, 515, 1154
BmrI	ACTGGG	1 cut(s)	1644
BmsI	GCATC	5 cut(s)	312, 915, 1129, 1429, 1976
BmuI	ACTGGG	1 cut(s)	1644
BpiI	GAAGAC	1 cut(s)	542
Bpu10I	CCTNAGC	1 cut(s)	266
Bpu1102I	GCTNAGC	2 cut(s)	321, 1116
Bpu14I	TTCGAA	2 cut(s)	1564, 1849
BpuEI	CTTGAG	3 cut(s)	188, 1763, 1933
BpuMI	CCSGG	3 cut(s)	97, 98, 515
BsaI	GGTCTC	3 cut(s)	350, 754, 891
BsaJI	CCNNGG	6 cut(s)	96, 768, 1153, 1695, 1769, 1991
BsaWI	WCCGGW	3 cut(s)	197, 664, 1621
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 98, 107, 128
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 342, 668, 671, 1071
Bse118I	RCCGGY	2 cut(s)	434, 1621
Bse1I	ACTGG	3 cut(s)	282, 1639, 1937
Bse21I	CCTNAGG	1 cut(s)	1368
Bse3DI	GCAATG	1 cut(s)	1469
BseBI	CCWGG	1 cut(s)	1154
BseDI	CCNNGG	6 cut(s)	96, 768, 1153, 1695, 1769, 1991
BseGI	GGATG	6 cut(s)	303, 386, 451, 913, 1596, 1779
BseLI	CCNNNNNNNGG	5 cut(s)	277, 342, 668, 671, 1071
BseMI	GCAATG	1 cut(s)	1469
BseMII	CTCAG	3 cut(s)	280, 1279, 1401
BseNI	ACTGG	3 cut(s)	282, 1639, 1937
BseRI	GAGGAG	3 cut(s)	1003, 1851, 1883
BseXI	GCAGC	2 cut(s)	719, 1597
BseYI	CCCAGC	1 cut(s)	1520
BsgI	GTGCAG	1 cut(s)	1596
Bsh1236I	CGCG	2 cut(s)	224, 295
BshFI	GGCC	3 cut(s)	101, 143, 1843
BshTI	ACCGGT	1 cut(s)	1621
BsiHKAI	GWGCWC	1 cut(s)	351
BsiHKCI	CYCGRG	2 cut(s)	47, 96
BsiSI	CCGG	6 cut(s)	97, 198, 435, 515, 665, 1622
BslFI	GGGAC	2 cut(s)	28, 1651
BslI	CCNNNNNNNGG	5 cut(s)	277, 342, 668, 671, 1071
BsmAI	GTCTC	4 cut(s)	350, 674, 754, 891
BsmBI	CGTCTC	1 cut(s)	674
BsmFI	GGGAC	2 cut(s)	28, 1651
BsmI	GAATGC	1 cut(s)	191
BsnI	GGCC	3 cut(s)	101, 143, 1843
Bso31I	GGTCTC	3 cut(s)	350, 754, 891
BsoBI	CYCGRG	2 cut(s)	47, 96
Bsp119I	TTCGAA	2 cut(s)	1564, 1849
Bsp1286I	GDGCHC	1 cut(s)	351
Bsp143I	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
Bsp1720I	GCTNAGC	2 cut(s)	321, 1116
BspACI	CCGC	6 cut(s)	301, 343, 809, 1801, 1844, 1865
BspANI	GGCC	3 cut(s)	101, 143, 1843
BspCNI	CTCAG	3 cut(s)	279, 1278, 1400
BspFNI	CGCG	2 cut(s)	224, 295
BspLI	GGNNCC	6 cut(s)	863, 948, 972, 996, 1639, 1797
BspMAI	CTGCAG	4 cut(s)	963, 987, 1011, 1947
BspMI	ACCTGC	4 cut(s)	919, 966, 990, 1014
BspQI	GCTCTTC	1 cut(s)	1524
BspT104I	TTCGAA	2 cut(s)	1564, 1849
BspTI	CTTAAG	2 cut(s)	1313, 1808
BspTNI	GGTCTC	3 cut(s)	350, 754, 891
BsrDI	GCAATG	1 cut(s)	1469
BsrFI	RCCGGY	2 cut(s)	434, 1621
BsrI	ACTGG	3 cut(s)	282, 1639, 1937
BssAI	RCCGGY	2 cut(s)	434, 1621
BssECI	CCNNGG	6 cut(s)	96, 768, 1153, 1695, 1769, 1991
BssMI	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
BssT1I	CCWWGG	1 cut(s)	1991
Bst2UI	CCWGG	1 cut(s)	1154
Bst4CI	ACNGT	4 cut(s)	548, 685, 1681, 1888
Bst6I	CTCTTC	3 cut(s)	611, 1458, 1524
BstAFI	CTTAAG	2 cut(s)	1313, 1808
BstBI	TTCGAA	2 cut(s)	1564, 1849
BstC8I	GCNNGC	4 cut(s)	189, 1238, 1310, 1805
BstDEI	CTNAG	7 cut(s)	266, 321, 1116, 1265, 1282, 1368, 1387
BstDSI	CCRYGG	2 cut(s)	768, 1695
BstF5I	GGATG	6 cut(s)	303, 386, 451, 913, 1596, 1779
BstFNI	CGCG	2 cut(s)	224, 295
BstHHI	GCGC	1 cut(s)	224
BstKTI	GATC	8 cut(s)	243, 283, 299, 949, 973, 997, 1257, 1264
BstMAI	GTCTC	4 cut(s)	350, 674, 754, 891
BstMBI	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
BstMWI	GCNNNNNNNGC	6 cut(s)	292, 331, 340, 925, 1318, 1610
BstNI	CCWGG	1 cut(s)	1154
BstNSI	RCATGY	1 cut(s)	191
BstSCI	CCNGG	4 cut(s)	95, 96, 513, 1152
BstSFI	CTRYAG	5 cut(s)	959, 983, 1007, 1677, 1943
BstUI	CGCG	2 cut(s)	224, 295
BstV1I	GCAGC	2 cut(s)	719, 1597
BstV2I	GAAGAC	1 cut(s)	542
BstX2I	RGATCY	6 cut(s)	240, 946, 970, 994, 1254, 1261
BstXI	CCANNNNNNTGG	1 cut(s)	832
BstYI	RGATCY	6 cut(s)	240, 946, 970, 994, 1254, 1261
Bsu36I	CCTNAGG	1 cut(s)	1368
BsuRI	GGCC	3 cut(s)	101, 143, 1843
BtgI	CCRYGG	2 cut(s)	768, 1695
BtrI	CACGTC	1 cut(s)	893
BtsCI	GGATG	6 cut(s)	303, 386, 451, 913, 1596, 1779
BtsIMutI	CAGTG	2 cut(s)	1273, 1766
BveI	ACCTGC	4 cut(s)	919, 966, 990, 1014
Cac8I	GCNNGC	4 cut(s)	189, 1238, 1310, 1805
CaiI	CAGNNNCTG	1 cut(s)	1272
CfoI	GCGC	1 cut(s)	224
Cfr10I	RCCGGY	2 cut(s)	434, 1621
Cfr13I	GGNCC	5 cut(s)	99, 1062, 1638, 1753, 1841
Cfr9I	CCCGGG	1 cut(s)	96
Csp6I	GTAC	2 cut(s)	1289, 1449
CspAI	ACCGGT	1 cut(s)	1621
CviAII	CATG	8 cut(s)	188, 882, 941, 1446, 1708, 1862, 1959, 2010
CviQI	GTAC	2 cut(s)	1289, 1449
DdeI	CTNAG	7 cut(s)	266, 321, 1116, 1265, 1282, 1368, 1387
DpnI	GATC	8 cut(s)	242, 282, 298, 948, 972, 996, 1256, 1263
DpnII	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
DraI	TTTAAA	1 cut(s)	784
DriI	GACNNNNNGTC	1 cut(s)	475
EaeI	YGGCCR	1 cut(s)	141
Eam1104I	CTCTTC	3 cut(s)	611, 1458, 1524
Eam1105I	GACNNNNNGTC	1 cut(s)	475
EarI	CTCTTC	3 cut(s)	611, 1458, 1524
Eco130I	CCWWGG	1 cut(s)	1991
Eco31I	GGTCTC	3 cut(s)	350, 754, 891
Eco47I	GGWCC	3 cut(s)	1062, 1638, 1753
Eco57I	CTGAAG	5 cut(s)	475, 1171, 1439, 1742, 1925
Eco81I	CCTNAGG	1 cut(s)	1368
Eco88I	CYCGRG	2 cut(s)	47, 96
EcoRI	GAATTC	1 cut(s)	1145
EcoRII	CCWGG	1 cut(s)	1152
EcoT14I	CCWWGG	1 cut(s)	1991
EcoT22I	ATGCAT	1 cut(s)	193
ErhI	CCWWGG	1 cut(s)	1991
Esp3I	CGTCTC	1 cut(s)	674
FaeI	CATG	8 cut(s)	191, 885, 944, 1449, 1711, 1865, 1962, 2013
FalI	AAGNNNNNCTT	2 cut(s)	502, 534
FaqI	GGGAC	2 cut(s)	28, 1651
FatI	CATG	8 cut(s)	187, 881, 940, 1445, 1707, 1861, 1958, 2009
FauI	CCCGC	3 cut(s)	308, 336, 1808
FauNDI	CATATG	2 cut(s)	1650, 1969
FblI	GTMKAC	3 cut(s)	5, 431, 1192
Fnu4HI	GCNGC	3 cut(s)	733, 1611, 1844
FokI	GGATG	6 cut(s)	290, 373, 438, 920, 1583, 1786
Fsp4HI	GCNGC	3 cut(s)	733, 1611, 1844
FspBI	CTAG	5 cut(s)	1355, 1503, 1785, 1856, 1992
GlaI	GCGC	1 cut(s)	223
GluI	GCNGC	3 cut(s)	733, 1611, 1844
GsaI	CCCAGC	1 cut(s)	1524
HaeIII	GGCC	3 cut(s)	101, 143, 1843
HapII	CCGG	6 cut(s)	97, 198, 435, 515, 665, 1622
HhaI	GCGC	1 cut(s)	224
Hin1II	CATG	8 cut(s)	191, 885, 944, 1449, 1711, 1865, 1962, 2013
Hin6I	GCGC	1 cut(s)	222
HinP1I	GCGC	1 cut(s)	222
HincII	GTYRAC	1 cut(s)	291
HindII	GTYRAC	1 cut(s)	291
HindIII	AAGCTT	1 cut(s)	1238
HinfI	GANTC	8 cut(s)	54, 201, 311, 658, 837, 1031, 1226, 1410
HpaII	CCGG	6 cut(s)	97, 198, 435, 515, 665, 1622
HphI	GGTGA	2 cut(s)	187, 823
Hpy166II	GTNNAC	5 cut(s)	6, 291, 432, 1193, 1884
Hpy188I	TCNGA	8 cut(s)	22, 59, 136, 924, 1342, 1390, 1773, 1905
Hpy8I	GTNNAC	5 cut(s)	6, 291, 432, 1193, 1884
Hpy99I	CGWCG	1 cut(s)	894
HpyAV	CCTTC	6 cut(s)	641, 721, 774, 961, 1092, 1766
HpyCH4III	ACNGT	4 cut(s)	548, 685, 1681, 1888
HpyCH4IV	ACGT	2 cut(s)	892, 1900
HpyF10VI	GCNNNNNNNGC	6 cut(s)	292, 331, 340, 925, 1318, 1610
HpyF3I	CTNAG	7 cut(s)	266, 321, 1116, 1265, 1282, 1368, 1387
HpySE526I	ACGT	2 cut(s)	892, 1900
Hsp92II	CATG	8 cut(s)	191, 885, 944, 1449, 1711, 1865, 1962, 2013
HspAI	GCGC	1 cut(s)	222
Kzo9I	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
LguI	GCTCTTC	1 cut(s)	1524
LmnI	GCTCC	1 cut(s)	1216
Lsp1109I	GCAGC	2 cut(s)	719, 1597
LweI	GCATC	5 cut(s)	312, 915, 1129, 1429, 1976
MaeI	CTAG	5 cut(s)	1355, 1503, 1785, 1856, 1992
MaeII	ACGT	2 cut(s)	892, 1900
MaeIII	GTNAC	3 cut(s)	556, 1274, 1346
MalI	GATC	8 cut(s)	242, 282, 298, 948, 972, 996, 1256, 1263
MboI	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
MflI	RGATCY	6 cut(s)	240, 946, 970, 994, 1254, 1261
MhlI	GDGCHC	1 cut(s)	351
MlsI	TGGCCA	1 cut(s)	143
MluNI	TGGCCA	1 cut(s)	143
MlyI	GAGTC	3 cut(s)	195, 305, 1040
MmeI	TCCRAC	3 cut(s)	271, 622, 1570
Mox20I	TGGCCA	1 cut(s)	143
Mph1103I	ATGCAT	1 cut(s)	193
MroXI	GAANNNNTTC	1 cut(s)	1515
MscI	TGGCCA	1 cut(s)	143
MseI	TTAA	9 cut(s)	719, 783, 1314, 1404, 1554, 1734, 1809, 1922, 1964
MslI	CAYNNNNRTG	2 cut(s)	1434, 1957
Msp20I	TGGCCA	1 cut(s)	143
MspA1I	CMGCKG	1 cut(s)	286
MspCI	CTTAAG	2 cut(s)	1313, 1808
MspI	CCGG	6 cut(s)	97, 198, 435, 515, 665, 1622
MspR9I	CCNGG	4 cut(s)	97, 98, 515, 1154
Mva1269I	GAATGC	1 cut(s)	191
MvaI	CCWGG	1 cut(s)	1154
MvnI	CGCG	2 cut(s)	224, 295
MwoI	GCNNNNNNNGC	6 cut(s)	292, 331, 340, 925, 1318, 1610
NciI	CCSGG	3 cut(s)	97, 98, 515
NdeI	CATATG	2 cut(s)	1650, 1969
NdeII	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
NlaIII	CATG	8 cut(s)	191, 885, 944, 1449, 1711, 1865, 1962, 2013
NlaIV	GGNNCC	6 cut(s)	863, 948, 972, 996, 1639, 1797
NmuCI	GTSAC	1 cut(s)	1274
NsiI	ATGCAT	1 cut(s)	193
NspI	RCATGY	1 cut(s)	191
NspV	TTCGAA	2 cut(s)	1564, 1849
PaeI	GCATGC	1 cut(s)	191
PaeR7I	CTCGAG	1 cut(s)	47
PciSI	GCTCTTC	1 cut(s)	1524
PctI	GAATGC	1 cut(s)	191
PdmI	GAANNNNTTC	1 cut(s)	1515
PfeI	GAWTC	5 cut(s)	54, 658, 837, 1226, 1410
PflMI	CCANNNNNTGG	1 cut(s)	277
PinAI	ACCGGT	1 cut(s)	1621
PkrI	GCNGC	3 cut(s)	734, 1612, 1845
PleI	GAGTC	3 cut(s)	195, 305, 1039
PpsI	GAGTC	3 cut(s)	195, 305, 1039
PsiI	TTATAA	2 cut(s)	522, 543
Psp6I	CCWGG	1 cut(s)	1152
PspFI	CCCAGC	1 cut(s)	1520
PspGI	CCWGG	1 cut(s)	1152
PspN4I	GGNNCC	6 cut(s)	863, 948, 972, 996, 1639, 1797
PspPI	GGNCC	5 cut(s)	99, 1062, 1638, 1753, 1841
PstI	CTGCAG	4 cut(s)	963, 987, 1011, 1947
PstNI	CAGNNNCTG	1 cut(s)	1272
PsuI	RGATCY	6 cut(s)	240, 946, 970, 994, 1254, 1261
PvuII	CAGCTG	1 cut(s)	286
RsaI	GTAC	2 cut(s)	1290, 1450
RsaNI	GTAC	2 cut(s)	1289, 1449
RseI	CAYNNNNRTG	2 cut(s)	1434, 1957
SapI	GCTCTTC	1 cut(s)	1524
SaqAI	TTAA	9 cut(s)	719, 783, 1314, 1404, 1554, 1734, 1809, 1922, 1964
SatI	GCNGC	3 cut(s)	733, 1611, 1844
Sau3AI	GATC	8 cut(s)	240, 280, 296, 946, 970, 994, 1254, 1261
Sau96I	GGNCC	5 cut(s)	99, 1062, 1638, 1753, 1841
SchI	GAGTC	3 cut(s)	195, 305, 1040
ScrFI	CCNGG	4 cut(s)	97, 98, 515, 1154
SduI	GDGCHC	1 cut(s)	351
SfaNI	GCATC	5 cut(s)	312, 915, 1129, 1429, 1976
SfcI	CTRYAG	5 cut(s)	959, 983, 1007, 1677, 1943
Sfr274I	CTCGAG	1 cut(s)	47
SfuI	TTCGAA	2 cut(s)	1564, 1849
SinI	GGWCC	3 cut(s)	1062, 1638, 1753
SlaI	CTCGAG	1 cut(s)	47
SmaI	CCCGGG	1 cut(s)	98
SmiMI	CAYNNNNRTG	2 cut(s)	1434, 1957
SmlI	CTYRAG	6 cut(s)	47, 203, 1313, 1742, 1808, 1912
SmoI	CTYRAG	6 cut(s)	47, 203, 1313, 1742, 1808, 1912
SphI	GCATGC	1 cut(s)	191
SsiI	CCGC	6 cut(s)	301, 343, 809, 1801, 1844, 1865
SspMI	CTAG	5 cut(s)	1355, 1503, 1785, 1856, 1992
StyD4I	CCNGG	4 cut(s)	95, 96, 513, 1152
StyI	CCWWGG	1 cut(s)	1991
TaaI	ACNGT	4 cut(s)	548, 685, 1681, 1888
TaiI	ACGT	2 cut(s)	895, 1903
TaqI	TCGA	6 cut(s)	48, 183, 889, 1205, 1564, 1849
TatI	WGTACW	1 cut(s)	1448
TauI	GCSGC	1 cut(s)	1846
TfiI	GAWTC	5 cut(s)	54, 658, 837, 1226, 1410
Tru1I	TTAA	9 cut(s)	719, 783, 1314, 1404, 1554, 1734, 1809, 1922, 1964
Tru9I	TTAA	9 cut(s)	719, 783, 1314, 1404, 1554, 1734, 1809, 1922, 1964
TscAI	CASTG	2 cut(s)	1273, 1766
TseFI	GTSAC	1 cut(s)	1274
TseI	GCWGC	2 cut(s)	732, 1610
Tsp45I	GTSAC	1 cut(s)	1274
TspDTI	ATGAA	6 cut(s)	48, 870, 1402, 1434, 1499, 1953
TspGWI	ACGGA	2 cut(s)	757, 772
TspMI	CCCGGG	1 cut(s)	96
TspRI	CASTG	2 cut(s)	1273, 1766
Van91I	CCANNNNNTGG	1 cut(s)	277
Vha464I	CTTAAG	2 cut(s)	1313, 1808
VpaK11BI	GGWCC	3 cut(s)	1062, 1638, 1753
XapI	RAATTY	5 cut(s)	527, 875, 1145, 1174, 1979
XceI	RCATGY	1 cut(s)	191
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1648
XhoI	CTCGAG	1 cut(s)	47
XmaI	CCCGGG	1 cut(s)	96
XmaJI	CCTAGG	1 cut(s)	1991
XmiI	GTMKAC	3 cut(s)	5, 431, 1192
XmnI	GAANNNNTTC	1 cut(s)	1515
XspI	CTAG	5 cut(s)	1355, 1503, 1785, 1856, 1992
Zsp2I	ATGCAT	1 cut(s)	193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.