Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001713

Physical Location & Seq

Genomic Coordinates Forward (+)

3647793 .. 3650440

Gene Structure 2648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28695

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGTCCAGGCGACCCCTTGTTACTACTTCATTCAAGACACCTTATGTGTCTCTGGATCTTCTTTCGTACTTGAAATCTGGGCAGGTCACACCATTCCAAGTTTTCAATGACGTTATCATGCCCGATTTCAAAGACCACATATCCAAGGGAAACAACAGCCCCAACAATGAAGAAGCACGTGGGATAGTTAAGGAAATCGAGGAAGATCTGGATCCCATTGGTAAGGCTTGTGAAAGGTTCCAGGAATGGGAAGTTGAGGTCAGCAGTGCTATCAAAGATTTAGCTTACCAAAGCCTGGATGATGCATTCAGAGAAAGAACAGAGGCACTGGAAAGTACCAACAGAGCCAATTTTCTTCTGAACAAGCTTACCAGGACCCGCAGCATTGTCTCCAGGTTGAAGAAATCTGTTTGTTCAGCTTCAATCAAGATGAGTGATGAGACCTCAGAAAACTCAGATACTCCCCAGACCGGTGAGGAATTACAGCCTTTGAAGACCAATGAAACGATGGGATTAACAGAAATTGAGGCAATCTACAATGATCTAGAAGACAGAGTGAGGCCCTGCTTGCTCTGTTTCTCAATGTTCCCTGAAGATGCTGTCATAAAGAAGAAGGTTCTAATCCACTGGTGGGTTGGAGAGGGGTTCATAGACAATTTGGGCGCAGGAGAGACTGCTGAGAAGAAGGGGAATACATTATTCAAAGTATTTTTGGATAAGGACATTGTTCAGCCCTTCTACAAAAGGCGCAGGCCTAGTGCAGACAGCTGCAAGATGCAACCTTCCATCCGTGATGCTGTGATTGAGCTTGCAACGAGAGAAAACTTCTTCCATTTCGATAGAAATGGAAACCCAACTGAAGATTTCTCTTGCTCTAAGAGGGCATGCCTGGTAAGAACCATAGAAGGATCCAATGTCCGTGAATTGCCACTCCTTTCAAGTCAGGAGAATGTTCAAAGTCTGATCAATGTCAATGAGCATGATCTTTATTTTAGACCAAACTGGTTCTCACAGATGAAAAGGGTCAAAGTTTTGCAGCTTGGGAGATGGCATTCAGACAAGCATCTCATCGAAGTAGAGGACTGTGAATTCCTGAAAGGCTTGAAGAATATGAGAGAGCTCCGGTACTTAAGCCTCCGAGGAGTGTCTAGAATCACAGAGCTTCCTGCTTCAATTTGCAAAGCCCGGAATCTAAGAATCCTGAACCTGAATGGATGCTGTGATTTGGAGAAACTCCCTCGTGGGATAGGCTCACTCAAGAAGCTGACACACCTGGATATGTATGAGTGCTACTTGATAAGCGGCATGCCCAAAGGACTTGCTTTGCTCTCCAACCTCCAAGTGCTCAAAGGGTTTGTGATTAGTAAAAGGTCGGGAAGCCAAGACTGTAAGCTAGATGACTTGTCAAAATTGGAATATCTTCGGAAGCTGAGTATCCACATAGACAGAAATCAAGCTAAAACAGCAGAAAGAGAACTGAATTCTTTGGCAAAGTTCAAAAAGCTCCGGTCACTTTCTATATCATGGTCACGAATATATGACAAGCCTGCAACTCATTCTCTCCAAACTCTCCAGAGGGCAAAAAGAATAACAAAACTGCCTTCAATGTTAATGGCTCTAGACAAACTTCCTTCAATGTCAAAGGGTCCAGAAAAACTGCCTTCAATTCCAGAGTCTCCACTTCCTTTGGAGAAACTTGACCTCCATTACTTCCCTCATTCAAAGATGCCAGACTGGTTGAAGCCAACACTCCTCGGTAAGCTAAAGAAGCTCTATATCAGAGGAGGAAGCCTCTCAGATCTTGGTCACAAGAAGCTCAATATTGGAGGAGGAAGCCTCTCAGATCTTTGTCACAATGGCATCAATTGTACATGGACTGTCCAAATGGTGCGCTTGAAGTTCTTGAATGAATTGAAAATGGATTGGGGAACACTGCAAGGCTTGTTTCCGGAACTGAGTTACTTGGAGGTAGTCGAATGTCCTAAACTCCGTTTCACGCAATGTGATGAAAATGGAGTGTGGAAAAAGGAAGACTCGAAGCCAGTAGAACTAGCATCGAGCAGCAATGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

690

Amino Acids

78.69

Weight (kDa)

8.85

Isoelectric Point (pI)

50.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	195 - 265	6.2e-10	Disease resistance protein Winged helix domain
LRR_14	PF23598	336 - 622	8.8e-24	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45500 AT5G45520 AT5G45520
fragaria_vesca	FvH4_6g22160 FvH4_6g22160
malus_domestica	MD10G1305300.v1.1 MD12G1056400.v1.1
prunus_persica	Prupe.4G034300_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078100_v2.0.a1 Prupe.7G078600_v2.0.a1
pyrus_communis	pycom10g25780 pycom12g04920
rosa_chinensis	RchiOBHm_Chr3g0479511 RchiOBHm_Chr5g0005761
rosa_laevigata	RLG00000023563
rosa_multiflora	Rmu_sc0004732.1_g000003 Rmu_sc0010248.1_g000001 Rmu_sc0014513.1_g000002
rosa_roxburghii	Rroxscaffold_1G00070100 Rroxscaffold_6G00402180
rosa_rugosa	Rorug03G0175900 Rorug03G0176000 Rorug03G0176100 Rorug03G0176200 Rorug04G0417900
rosa_samantha	Rh3AG226900 Rh3BG260000 Rh3CG234800 Rh3CG256900 Rh3DG252500 Rh5AG045400 Rh5BG044100 Rh5CG052900 Rh5DG043900
rosa_wichuraiana	Rw0G011120 Rw3G020270 Rw5G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	73
AccB7I	CCANNNNNTGG	1 cut(s)	295
AccIII	TCCGGA	1 cut(s)	1948
AciI	CCGC	2 cut(s)	379, 1302
AclWI	GGATC	5 cut(s)	63, 206, 219, 903, 916
AcsI	RAATTY	2 cut(s)	1088, 1480
AcuI	CTGAAG	2 cut(s)	612, 879
AcvI	CACGTG	1 cut(s)	179
AfaI	GTAC	4 cut(s)	68, 337, 1127, 1870
AfiI	CCNNNNNNNGG	4 cut(s)	247, 295, 470, 631
AflII	CTTAAG	1 cut(s)	1129
AgeI	ACCGGT	1 cut(s)	470
AjnI	CCWGG	7 cut(s)	5, 240, 294, 371, 392, 888, 1272
Alw21I	GWGCWC	2 cut(s)	1122, 1347
Alw26I	GTCTC	5 cut(s)	54, 394, 434, 665, 1680
AlwI	GGATC	5 cut(s)	63, 206, 219, 903, 916
Aor13HI	TCCGGA	1 cut(s)	1948
AoxI	GGCC	2 cut(s)	560, 752
ApeKI	GCWGC	4 cut(s)	381, 768, 1036, 2061
ApoI	RAATTY	2 cut(s)	1088, 1480
AsiGI	ACCGGT	1 cut(s)	470
Asp700I	GAANNNNTTC	1 cut(s)	1419
AspLEI	GCGC	3 cut(s)	665, 750, 1893
AspS9I	GGNCC	3 cut(s)	375, 561, 1646
AsuC2I	CCSGG	1 cut(s)	1186
AsuHPI	GGTGA	1 cut(s)	485
AvaII	GGWCC	2 cut(s)	375, 1646
BamHI	GGATCC	2 cut(s)	211, 908
BanII	GRGCYC	1 cut(s)	1122
BauI	CACGAG	1 cut(s)	1239
BbrPI	CACGTG	1 cut(s)	179
BbsI	GAAGAC	3 cut(s)	500, 555, 2037
Bbv12I	GWGCWC	2 cut(s)	1122, 1347
BbvI	GCAGC	3 cut(s)	393, 755, 1048
BccI	CCATC	3 cut(s)	502, 794, 1041
BciT130I	CCWGG	7 cut(s)	7, 242, 296, 373, 394, 890, 1274
BciVI	GTATCC	1 cut(s)	1445
BclI	TGATCA	1 cut(s)	963
BcnI	CCSGG	1 cut(s)	1186
BcoDI	GTCTC	5 cut(s)	54, 394, 434, 665, 1680
BfaI	CTAG	6 cut(s)	545, 756, 1149, 1394, 1619, 2051
BfrI	CTTAAG	1 cut(s)	1129
BfuAI	ACCTGC	1 cut(s)	73
BfuI	GTATCC	1 cut(s)	1445
BglII	AGATCT	3 cut(s)	205, 1798, 1843
BisI	GCNGC	5 cut(s)	382, 769, 1037, 1303, 2062
BlsI	GCNGC	5 cut(s)	383, 770, 1038, 1304, 2063
Bme1390I	CCNGG	8 cut(s)	7, 242, 296, 373, 394, 890, 1186, 1274
Bme18I	GGWCC	2 cut(s)	375, 1646
BmgT120I	GGNCC	3 cut(s)	375, 561, 1646
BmiI	GGNNCC	5 cut(s)	213, 239, 377, 910, 1647
BmrFI	CCNGG	8 cut(s)	7, 242, 296, 373, 394, 890, 1186, 1274
BmsI	GCATC	9 cut(s)	292, 586, 765, 784, 1072, 1205, 1716, 1869, 2063
BpiI	GAAGAC	3 cut(s)	500, 555, 2037
BplI	GAGNNNNNCTC	4 cut(s)	1776, 1808, 1821, 1853
BpmI	CTGGAG	2 cut(s)	376, 1556
BpuEI	CTTGAG	1 cut(s)	1241
BpuMI	CCSGG	1 cut(s)	1186
BsaAI	YACGTR	1 cut(s)	179
BsaBI	GATNNNNATC	1 cut(s)	210
BsaI	GGTCTC	1 cut(s)	434
BsaJI	CCNNGG	3 cut(s)	144, 1138, 1753
BsaWI	WCCGGW	4 cut(s)	470, 1122, 1506, 1948
BsaXI	ACNNNNNCTCC	2 cut(s)	1686, 1716
Bsc4I	CCNNNNNNNGG	4 cut(s)	247, 295, 470, 631
Bse118I	RCCGGY	1 cut(s)	470
Bse1I	ACTGG	5 cut(s)	333, 632, 1007, 1739, 2042
Bse3DI	GCAATG	2 cut(s)	2006, 2071
Bse8I	GATNNNNATC	1 cut(s)	210
BseAI	TCCGGA	1 cut(s)	1948
BseBI	CCWGG	7 cut(s)	7, 242, 296, 373, 394, 890, 1274
BseDI	CCNNGG	3 cut(s)	144, 1138, 1753
BseGI	GGATG	3 cut(s)	304, 786, 1220
BseJI	GATNNNNATC	1 cut(s)	210
BseLI	CCNNNNNNNGG	4 cut(s)	247, 295, 470, 631
BseMI	GCAATG	2 cut(s)	2006, 2071
BseMII	CTCAG	7 cut(s)	459, 468, 669, 1421, 1809, 1854, 1946
BseNI	ACTGG	5 cut(s)	333, 632, 1007, 1739, 2042
BseRI	GAGGAG	4 cut(s)	1155, 1742, 1797, 1842
BseXI	GCAGC	3 cut(s)	393, 755, 1048
BsgI	GTGCAG	1 cut(s)	780
BshFI	GGCC	2 cut(s)	562, 754
BshTI	ACCGGT	1 cut(s)	470
BsiHKAI	GWGCWC	2 cut(s)	1122, 1347
BsiSI	CCGG	5 cut(s)	471, 1123, 1186, 1507, 1949
BslI	CCNNNNNNNGG	4 cut(s)	247, 295, 470, 631
BsmAI	GTCTC	5 cut(s)	54, 394, 434, 665, 1680
BsmI	GAATGC	2 cut(s)	305, 1051
BsnI	GGCC	2 cut(s)	562, 754
Bso31I	GGTCTC	1 cut(s)	434
Bsp1286I	GDGCHC	2 cut(s)	1122, 1347
Bsp13I	TCCGGA	1 cut(s)	1948
Bsp1407I	TGTACA	1 cut(s)	1868
Bsp143I	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
BspACI	CCGC	2 cut(s)	379, 1302
BspANI	GGCC	2 cut(s)	562, 754
BspCNI	CTCAG	7 cut(s)	458, 467, 670, 1422, 1808, 1853, 1947
BspEI	TCCGGA	1 cut(s)	1948
BspLI	GGNNCC	5 cut(s)	213, 239, 377, 910, 1647
BspMI	ACCTGC	1 cut(s)	73
BspPI	GGATC	5 cut(s)	63, 206, 219, 903, 916
BspTI	CTTAAG	1 cut(s)	1129
BspTNI	GGTCTC	1 cut(s)	434
BsrDI	GCAATG	2 cut(s)	2006, 2071
BsrFI	RCCGGY	1 cut(s)	470
BsrGI	TGTACA	1 cut(s)	1868
BsrI	ACTGG	5 cut(s)	333, 632, 1007, 1739, 2042
BssAI	RCCGGY	1 cut(s)	470
BssECI	CCNNGG	3 cut(s)	144, 1138, 1753
BssMI	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
BssSI	CACGAG	1 cut(s)	1239
BssT1I	CCWWGG	1 cut(s)	144
Bst2BI	CACGAG	1 cut(s)	1239
Bst2UI	CCWGG	7 cut(s)	7, 242, 296, 373, 394, 890, 1274
Bst4CI	ACNGT	3 cut(s)	1085, 1388, 1879
BstAFI	CTTAAG	1 cut(s)	1129
BstAUI	TGTACA	1 cut(s)	1868
BstBAI	YACGTR	1 cut(s)	179
BstC8I	GCNNGC	6 cut(s)	569, 752, 810, 886, 1307, 1548
BstF5I	GGATG	3 cut(s)	304, 786, 1220
BstHHI	GCGC	3 cut(s)	665, 750, 1893
BstKTI	GATC	9 cut(s)	58, 208, 214, 544, 911, 966, 985, 1801, 1846
BstMAI	GTCTC	5 cut(s)	54, 394, 434, 665, 1680
BstMBI	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
BstMWI	GCNNNNNNNGC	3 cut(s)	568, 1463, 1768
BstNI	CCWGG	7 cut(s)	7, 242, 296, 373, 394, 890, 1274
BstNSI	RCATGY	2 cut(s)	888, 1309
BstSCI	CCNGG	8 cut(s)	5, 240, 294, 371, 392, 888, 1184, 1272
BstV1I	GCAGC	3 cut(s)	393, 755, 1048
BstV2I	GAAGAC	3 cut(s)	500, 555, 2037
BstX2I	RGATCY	6 cut(s)	55, 205, 211, 908, 1798, 1843
BstYI	RGATCY	6 cut(s)	55, 205, 211, 908, 1798, 1843
BsuI	GTATCC	1 cut(s)	1445
BsuRI	GGCC	2 cut(s)	562, 754
BtsCI	GGATG	3 cut(s)	304, 786, 1220
BtsI	GCAGTG	2 cut(s)	271, 1931
BtsIMutI	CAGTG	4 cut(s)	271, 326, 625, 1931
BveI	ACCTGC	1 cut(s)	73
Cac8I	GCNNGC	6 cut(s)	569, 752, 810, 886, 1307, 1548
CfoI	GCGC	3 cut(s)	665, 750, 1893
Cfr10I	RCCGGY	1 cut(s)	470
Cfr13I	GGNCC	3 cut(s)	375, 561, 1646
Csp6I	GTAC	4 cut(s)	67, 336, 1126, 1869
CspAI	ACCGGT	1 cut(s)	470
CspCI	CAANNNNNGTGG	2 cut(s)	1668, 1703
CviAII	CATG	6 cut(s)	118, 885, 980, 1306, 1524, 1872
CviQI	GTAC	4 cut(s)	67, 336, 1126, 1869
DpnI	GATC	9 cut(s)	57, 207, 213, 543, 910, 965, 984, 1800, 1845
DpnII	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
Ecl136II	GAGCTC	1 cut(s)	1120
Eco130I	CCWWGG	1 cut(s)	144
Eco147I	AGGCCT	1 cut(s)	754
Eco24I	GRGCYC	1 cut(s)	1122
Eco31I	GGTCTC	1 cut(s)	434
Eco47I	GGWCC	2 cut(s)	375, 1646
Eco53kI	GAGCTC	1 cut(s)	1120
Eco57I	CTGAAG	2 cut(s)	612, 879
Eco72I	CACGTG	1 cut(s)	179
EcoICRI	GAGCTC	1 cut(s)	1120
EcoO109I	RGGNCCY	2 cut(s)	375, 561
EcoRI	GAATTC	2 cut(s)	1088, 1480
EcoRII	CCWGG	7 cut(s)	5, 240, 294, 371, 392, 888, 1272
EcoT14I	CCWWGG	1 cut(s)	144
EcoT22I	ATGCAT	1 cut(s)	307
EcoT38I	GRGCYC	1 cut(s)	1122
ErhI	CCWWGG	1 cut(s)	144
FaeI	CATG	6 cut(s)	121, 888, 983, 1309, 1527, 1875
FatI	CATG	6 cut(s)	117, 884, 979, 1305, 1523, 1871
FauI	CCCGC	1 cut(s)	386
FbaI	TGATCA	1 cut(s)	963
Fnu4HI	GCNGC	5 cut(s)	382, 769, 1037, 1303, 2062
FokI	GGATG	3 cut(s)	311, 773, 1227
FriOI	GRGCYC	1 cut(s)	1122
Fsp4HI	GCNGC	5 cut(s)	382, 769, 1037, 1303, 2062
FspBI	CTAG	6 cut(s)	545, 756, 1149, 1394, 1619, 2051
GlaI	GCGC	3 cut(s)	664, 749, 1892
GluI	GCNGC	5 cut(s)	382, 769, 1037, 1303, 2062
GsuI	CTGGAG	2 cut(s)	376, 1556
HaeIII	GGCC	2 cut(s)	562, 754
HapII	CCGG	5 cut(s)	471, 1123, 1186, 1507, 1949
HhaI	GCGC	3 cut(s)	665, 750, 1893
Hin1II	CATG	6 cut(s)	121, 888, 983, 1309, 1527, 1875
Hin6I	GCGC	3 cut(s)	663, 748, 1891
HinP1I	GCGC	3 cut(s)	663, 748, 1891
HindIII	AAGCTT	1 cut(s)	365
HinfI	GANTC	5 cut(s)	1152, 1189, 1197, 1673, 2033
HpaII	CCGG	5 cut(s)	471, 1123, 1186, 1507, 1949
HphI	GGTGA	1 cut(s)	485
HpyAV	CCTTC	8 cut(s)	607, 679, 745, 792, 899, 1611, 1641, 1671
HpyCH4III	ACNGT	3 cut(s)	1085, 1388, 1879
HpyCH4IV	ACGT	2 cut(s)	111, 178
HpyCH4V	TGCA	9 cut(s)	305, 761, 771, 778, 812, 1036, 1179, 1550, 1936
HpyF10VI	GCNNNNNNNGC	3 cut(s)	568, 1463, 1768
HpySE526I	ACGT	2 cut(s)	111, 178
Hsp92II	CATG	6 cut(s)	121, 888, 983, 1309, 1527, 1875
HspAI	GCGC	3 cut(s)	663, 748, 1891
Kpn2I	TCCGGA	1 cut(s)	1948
Ksp22I	TGATCA	1 cut(s)	963
Kzo9I	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
LmnI	GCTCC	2 cut(s)	1125, 1509
Lsp1109I	GCAGC	3 cut(s)	393, 755, 1048
LweI	GCATC	9 cut(s)	292, 586, 765, 784, 1072, 1205, 1716, 1869, 2063
MaeI	CTAG	6 cut(s)	545, 756, 1149, 1394, 1619, 2051
MaeII	ACGT	2 cut(s)	111, 178
MaeIII	GTNAC	7 cut(s)	19, 85, 1509, 1527, 1805, 1850, 1958
MalI	GATC	9 cut(s)	57, 207, 213, 543, 910, 965, 984, 1800, 1845
MboI	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
MfeI	CAATTG	1 cut(s)	1864
MflI	RGATCY	6 cut(s)	55, 205, 211, 908, 1798, 1843
MhlI	GDGCHC	2 cut(s)	1122, 1347
MlyI	GAGTC	2 cut(s)	1682, 2027
MmeI	TCCRAC	2 cut(s)	616, 1356
Mph1103I	ATGCAT	1 cut(s)	307
MroI	TCCGGA	1 cut(s)	1948
MroXI	GAANNNNTTC	1 cut(s)	1419
MseI	TTAA	4 cut(s)	189, 515, 1130, 1610
MspA1I	CMGCKG	1 cut(s)	768
MspCI	CTTAAG	1 cut(s)	1129
MspI	CCGG	5 cut(s)	471, 1123, 1186, 1507, 1949
MspR9I	CCNGG	8 cut(s)	7, 242, 296, 373, 394, 890, 1186, 1274
MunI	CAATTG	1 cut(s)	1864
Mva1269I	GAATGC	2 cut(s)	305, 1051
MvaI	CCWGG	7 cut(s)	7, 242, 296, 373, 394, 890, 1274
MwoI	GCNNNNNNNGC	3 cut(s)	568, 1463, 1768
NciI	CCSGG	1 cut(s)	1186
NdeII	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
NlaIII	CATG	6 cut(s)	121, 888, 983, 1309, 1527, 1875
NlaIV	GGNNCC	5 cut(s)	213, 239, 377, 910, 1647
NmuCI	GTSAC	5 cut(s)	85, 1509, 1527, 1805, 1850
NsiI	ATGCAT	1 cut(s)	307
NspI	RCATGY	2 cut(s)	888, 1309
PaeI	GCATGC	2 cut(s)	888, 1309
PceI	AGGCCT	1 cut(s)	754
PctI	GAATGC	2 cut(s)	305, 1051
PdmI	GAANNNNTTC	1 cut(s)	1419
PfeI	GAWTC	3 cut(s)	1152, 1189, 1197
PflMI	CCANNNNNTGG	1 cut(s)	295
PfoI	TCCNGGA	1 cut(s)	240
PinAI	ACCGGT	1 cut(s)	470
PkrI	GCNGC	5 cut(s)	383, 770, 1038, 1304, 2063
PleI	GAGTC	2 cut(s)	1681, 2027
PmaCI	CACGTG	1 cut(s)	179
PmlI	CACGTG	1 cut(s)	179
PpsI	GAGTC	2 cut(s)	1681, 2027
Ppu21I	YACGTR	1 cut(s)	179
PpuMI	RGGWCCY	1 cut(s)	375
Psp124BI	GAGCTC	1 cut(s)	1122
Psp5II	RGGWCCY	1 cut(s)	375
Psp6I	CCWGG	7 cut(s)	5, 240, 294, 371, 392, 888, 1272
PspCI	CACGTG	1 cut(s)	179
PspGI	CCWGG	7 cut(s)	5, 240, 294, 371, 392, 888, 1272
PspN4I	GGNNCC	5 cut(s)	213, 239, 377, 910, 1647
PspPI	GGNCC	3 cut(s)	375, 561, 1646
PspPPI	RGGWCCY	1 cut(s)	375
PsuI	RGATCY	6 cut(s)	55, 205, 211, 908, 1798, 1843
PvuII	CAGCTG	1 cut(s)	768
RsaI	GTAC	4 cut(s)	68, 337, 1127, 1870
RsaNI	GTAC	4 cut(s)	67, 336, 1126, 1869
SacI	GAGCTC	1 cut(s)	1122
SaqAI	TTAA	4 cut(s)	189, 515, 1130, 1610
SatI	GCNGC	5 cut(s)	382, 769, 1037, 1303, 2062
Sau3AI	GATC	9 cut(s)	55, 205, 211, 541, 908, 963, 982, 1798, 1843
Sau96I	GGNCC	3 cut(s)	375, 561, 1646
SchI	GAGTC	2 cut(s)	1682, 2027
ScrFI	CCNGG	8 cut(s)	7, 242, 296, 373, 394, 890, 1186, 1274
SduI	GDGCHC	2 cut(s)	1122, 1347
SfaNI	GCATC	9 cut(s)	292, 586, 765, 784, 1072, 1205, 1716, 1869, 2063
SinI	GGWCC	2 cut(s)	375, 1646
SmlI	CTYRAG	2 cut(s)	1129, 1256
SmoI	CTYRAG	2 cut(s)	1129, 1256
SphI	GCATGC	2 cut(s)	888, 1309
SseBI	AGGCCT	1 cut(s)	754
SsiI	CCGC	2 cut(s)	379, 1302
SspI	AATATT	1 cut(s)	1822
SspMI	CTAG	6 cut(s)	545, 756, 1149, 1394, 1619, 2051
SstI	GAGCTC	1 cut(s)	1122
StuI	AGGCCT	1 cut(s)	754
StyD4I	CCNGG	8 cut(s)	5, 240, 294, 371, 392, 888, 1184, 1272
StyI	CCWWGG	1 cut(s)	144
TaaI	ACNGT	3 cut(s)	1085, 1388, 1879
TaiI	ACGT	2 cut(s)	114, 181
TaqI	TCGA	6 cut(s)	198, 837, 1071, 1974, 2036, 2057
TatI	WGTACW	1 cut(s)	1868
TauI	GCSGC	1 cut(s)	1305
TfiI	GAWTC	3 cut(s)	1152, 1189, 1197
Tru1I	TTAA	4 cut(s)	189, 515, 1130, 1610
Tru9I	TTAA	4 cut(s)	189, 515, 1130, 1610
TscAI	CASTG	4 cut(s)	271, 333, 632, 1938
TseFI	GTSAC	5 cut(s)	85, 1509, 1527, 1805, 1850
TseI	GCWGC	4 cut(s)	381, 768, 1036, 2061
Tsp45I	GTSAC	5 cut(s)	85, 1509, 1527, 1805, 1850
TspDTI	ATGAA	7 cut(s)	18, 183, 516, 637, 1031, 1923, 2022
TspGWI	ACGGA	3 cut(s)	779, 908, 1979
TspRI	CASTG	4 cut(s)	271, 333, 632, 1938
Van91I	CCANNNNNTGG	1 cut(s)	295
Vha464I	CTTAAG	1 cut(s)	1129
VpaK11BI	GGWCC	2 cut(s)	375, 1646
XapI	RAATTY	2 cut(s)	1088, 1480
XbaI	TCTAGA	3 cut(s)	544, 1148, 1618
XceI	RCATGY	2 cut(s)	888, 1309
XcmI	CCANNNNNNNNNTGG	2 cut(s)	505, 632
XmnI	GAANNNNTTC	1 cut(s)	1419
XspI	CTAG	6 cut(s)	545, 756, 1149, 1394, 1619, 2051
Zsp2I	ATGCAT	1 cut(s)	307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.