Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002532

Physical Location & Seq

Genomic Coordinates Forward (+)

12957838 .. 12963261

Gene Structure 5424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G098300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGCTCCTCCGGCTCTTTCCTTCCATTGCCCGACCCTTCTCAGTCTCTTCCCGGTCAAGGTGTAGATTGTATTGTGCGAGCAGAGAAATGGGCCAGGACAGTTCAGAATGTGAAGTGATTCAAGTGAAGAGACGCGCAACATTTCGTTTATGCAATGTGTCAAGTTACACTACTGAAATACTGGAGATTCGAGCTGACGATCCAACATTGCATGTTGTAGTTATCCCTGGAAATCCAGGTATTGTTTTATTCTATAAAGAGTTTTTGGAGTCACTATATGAGCTGCTGGGTGGAACTGCGTCTGTGACAGCCGTTGGGCATATATCTCAAACAAAAAAGAGCTGGGAGCATGGAAGGTTGTTCTCATTACAAGAACAAATTAATCATAAGATGGACGTCATCAAACAGGAATTGCAAAATGAAGTTCCTATATTACTGGTTGGGCACTCTATTGGTTCATATATATCTGTCGAAATGTTTAAGAGGTCTCCAGAGAAGGTGAAATATTGTATCGGAATATATCCATTTTTGGCGCTAAACCCACAATCCAGAAAGCAGTATATTATTGGGAAGATTGCAGAGTCCCGTATTCTATGTGTTGTCTTCAGCTTTATTGTTGCGCTCGTGGGTTTGTTGCCTATCCGACTGTTGAGGTTAATTGTGACCACATTCCTTGGGAAGTTCTGGTCAGCTACTGCAGTTGACGCTGTTTGCTCTCACTTGGTAAAGTACCATACCATGCGAAATGTCCTCTTTATGGCAATGACAGAATTCAGAAAGCTTTCAGAAACACCAGATTGGGCATTCATGAGGGAAAATCAACACAAAATTGCATTTTTGTTTGGCATTGATGATCACTGGGGTCCACTGCAAATGTTTGAAGAGATTTCCAAGCAGATTCCAGATGCTGCTCTATCAATTGAAAGAGAGGGCCTCACTGATCATGGTTTTTGTTGTACTGAGGCCGGTTCATTGTGGGTTGCCGAGCATGTAGCAAAGTTGATCAAGAATCAAAAAGCATCACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIDHydrolase

Protein Analysis

343

Amino Acids

38.88

Weight (kDa)

8.66

Isoelectric Point (pI)

45.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002532)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11620 AT3G11620 AT3G11620 AT3G11620 AT3G11620 AT3G11620 AT3G11620 AT3G11620 AT3G11620
fragaria_vesca	FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910 FvH4_6g19910
malus_domestica	MD12G1034600.v1.1 MD14G1035800.v1.1
prunus_persica	Prupe.7G098300_v2.0.a1 Prupe.7G098300_v2.0.a1
pyrus_communis	pycom12g03190
rosa_chinensis	RchiOBHm_Chr3g0475311 RchiOBHm_Chr3g0475321
rosa_laevigata	RLG00000023852
rosa_multiflora	Rmu_ssc0000140.1_g000007
rosa_roxburghii	Rroxscaffold_6G00406390
rosa_rugosa	Rorug03G0147900 Rorug03G0148000 Rorug03G0148000 Rorug03G0148100 Rorug03G0148200
rosa_samantha	Rh3AG198000 Rh3BG228200 Rh3DG223400
rosa_wichuraiana	Rw3G017990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	399
AccII	CGCG	1 cut(s)	135
AclWI	GGATC	1 cut(s)	194
AcsI	RAATTY	1 cut(s)	770
AcuI	CTGAAG	1 cut(s)	589
AcyI	GRCGYC	1 cut(s)	396
AfaI	GTAC	2 cut(s)	731, 958
AfiI	CCNNNNNNNGG	2 cut(s)	57, 757
AgsI	TTSAA	3 cut(s)	122, 881, 923
AjnI	CCWGG	3 cut(s)	93, 226, 235
AluBI	AGCT	6 cut(s)	194, 283, 342, 609, 692, 781
AluI	AGCT	6 cut(s)	194, 283, 342, 609, 692, 781
Alw26I	GTCTC	3 cut(s)	49, 124, 492
AlwI	GGATC	1 cut(s)	194
AlwNI	CAGNNNCTG	2 cut(s)	695, 908
AoxI	GGCC	3 cut(s)	91, 931, 963
ApeKI	GCWGC	2 cut(s)	283, 908
ApoI	RAATTY	1 cut(s)	770
AseI	ATTAAT	1 cut(s)	381
Asp700I	GAANNNNTTC	2 cut(s)	117, 781
AspLEI	GCGC	3 cut(s)	137, 535, 622
AspS9I	GGNCC	3 cut(s)	91, 863, 931
AsuC2I	CCSGG	1 cut(s)	52
AsuHPI	GGTGA	1 cut(s)	511
AvaII	GGWCC	1 cut(s)	863
BaeGI	GKGCMC	1 cut(s)	447
BauI	CACGAG	1 cut(s)	623
BbsI	GAAGAC	1 cut(s)	595
BbvI	GCAGC	2 cut(s)	270, 895
BccI	CCATC	1 cut(s)	385
BceAI	ACGGC	1 cut(s)	296
BciT130I	CCWGG	3 cut(s)	95, 228, 237
BclI	TGATCA	3 cut(s)	853, 940, 1002
BcnI	CCSGG	1 cut(s)	52
BcoDI	GTCTC	3 cut(s)	49, 124, 492
BfmI	CTRYAG	1 cut(s)	696
BfoI	RGCGCY	1 cut(s)	536
BisI	GCNGC	2 cut(s)	284, 909
BlsI	GCNGC	2 cut(s)	285, 910
Bme1390I	CCNGG	4 cut(s)	52, 95, 228, 237
Bme18I	GGWCC	1 cut(s)	863
BmgT120I	GGNCC	3 cut(s)	91, 863, 931
BmiI	GGNNCC	1 cut(s)	864
BmrFI	CCNGG	4 cut(s)	52, 95, 228, 237
BmrI	ACTGGG	1 cut(s)	868
BmsI	GCATC	1 cut(s)	895
BmuI	ACTGGG	1 cut(s)	868
BpiI	GAAGAC	1 cut(s)	595
BplI	GAGNNNNNCTC	2 cut(s)	918, 950
BpmI	CTGGAG	2 cut(s)	203, 474
BpuMI	CCSGG	1 cut(s)	52
BsaHI	GRCGYC	1 cut(s)	396
BsaI	GGTCTC	1 cut(s)	492
BsaJI	CCNNGG	2 cut(s)	226, 673
Bsc4I	CCNNNNNNNGG	2 cut(s)	57, 757
Bse118I	RCCGGY	1 cut(s)	965
Bse1I	ACTGG	3 cut(s)	186, 441, 863
Bse3DI	GCAATG	4 cut(s)	24, 160, 206, 768
BseBI	CCWGG	3 cut(s)	95, 228, 237
BseDI	CCNNGG	2 cut(s)	226, 673
BseLI	CCNNNNNNNGG	2 cut(s)	57, 757
BseMI	GCAATG	4 cut(s)	24, 160, 206, 768
BseMII	CTCAG	2 cut(s)	54, 951
BseNI	ACTGG	3 cut(s)	186, 441, 863
BseSI	GKGCMC	1 cut(s)	447
BseXI	GCAGC	2 cut(s)	270, 895
BseYI	CCCAGC	2 cut(s)	286, 342
Bsh1236I	CGCG	1 cut(s)	135
BshFI	GGCC	3 cut(s)	93, 933, 965
BsiSI	CCGG	3 cut(s)	10, 52, 966
BslFI	GGGAC	1 cut(s)	568
BslI	CCNNNNNNNGG	2 cut(s)	57, 757
BsmAI	GTCTC	3 cut(s)	49, 124, 492
BsmBI	CGTCTC	1 cut(s)	124
BsmFI	GGGAC	1 cut(s)	568
BsmI	GAATGC	1 cut(s)	803
BsnI	GGCC	3 cut(s)	93, 933, 965
Bso31I	GGTCTC	1 cut(s)	492
Bsp1286I	GDGCHC	1 cut(s)	447
Bsp143I	GATC	4 cut(s)	199, 853, 940, 1002
BspANI	GGCC	3 cut(s)	93, 933, 965
BspCNI	CTCAG	2 cut(s)	53, 952
BspFNI	CGCG	1 cut(s)	135
BspHI	TCATGA	1 cut(s)	807
BspLI	GGNNCC	1 cut(s)	864
BspMAI	CTGCAG	1 cut(s)	700
BspPI	GGATC	1 cut(s)	194
BspTNI	GGTCTC	1 cut(s)	492
BsrDI	GCAATG	4 cut(s)	24, 160, 206, 768
BsrFI	RCCGGY	1 cut(s)	965
BsrI	ACTGG	3 cut(s)	186, 441, 863
BssAI	RCCGGY	1 cut(s)	965
BssECI	CCNNGG	2 cut(s)	226, 673
BssMI	GATC	4 cut(s)	199, 853, 940, 1002
BssNI	GRCGYC	1 cut(s)	396
BssSI	CACGAG	1 cut(s)	623
BssT1I	CCWWGG	1 cut(s)	673
Bst2BI	CACGAG	1 cut(s)	623
Bst2UI	CCWGG	3 cut(s)	95, 228, 237
Bst4CI	ACNGT	3 cut(s)	101, 648, 1026
Bst6I	CTCTTC	3 cut(s)	52, 122, 876
BstACI	GRCGYC	1 cut(s)	396
BstC8I	GCNNGC	1 cut(s)	79
BstDEI	CTNAG	2 cut(s)	40, 960
BstFNI	CGCG	1 cut(s)	135
BstH2I	RGCGCY	1 cut(s)	536
BstHHI	GCGC	3 cut(s)	137, 535, 622
BstKTI	GATC	4 cut(s)	202, 856, 943, 1005
BstMAI	GTCTC	3 cut(s)	49, 124, 492
BstMBI	GATC	4 cut(s)	199, 853, 940, 1002
BstMWI	GCNNNNNNNGC	2 cut(s)	10, 704
BstNI	CCWGG	3 cut(s)	95, 228, 237
BstNSI	RCATGY	2 cut(s)	215, 992
BstSCI	CCNGG	4 cut(s)	50, 93, 226, 235
BstSFI	CTRYAG	1 cut(s)	696
BstSLI	GKGCMC	1 cut(s)	447
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	2 cut(s)	270, 895
BstV2I	GAAGAC	1 cut(s)	595
BsuRI	GGCC	3 cut(s)	93, 933, 965
BtsI	GCAGTG	1 cut(s)	866
BtsIMutI	CAGTG	3 cut(s)	856, 866, 936
Cac8I	GCNNGC	1 cut(s)	79
CaiI	CAGNNNCTG	2 cut(s)	695, 908
CciI	TCATGA	1 cut(s)	807
CfoI	GCGC	3 cut(s)	137, 535, 622
Cfr10I	RCCGGY	1 cut(s)	965
Cfr13I	GGNCC	3 cut(s)	91, 863, 931
CseI	GACGC	3 cut(s)	141, 288, 713
Csp6I	GTAC	2 cut(s)	730, 957
CspCI	CAANNNNNGTGG	2 cut(s)	655, 690
CviAII	CATG	6 cut(s)	212, 350, 739, 808, 944, 989
CviQI	GTAC	2 cut(s)	730, 957
DdeI	CTNAG	2 cut(s)	40, 960
DpnI	GATC	4 cut(s)	201, 855, 942, 1004
DpnII	GATC	4 cut(s)	199, 853, 940, 1002
Eam1104I	CTCTTC	3 cut(s)	52, 122, 876
EarI	CTCTTC	3 cut(s)	52, 122, 876
Eco130I	CCWWGG	1 cut(s)	673
Eco31I	GGTCTC	1 cut(s)	492
Eco47I	GGWCC	1 cut(s)	863
Eco57I	CTGAAG	1 cut(s)	589
EcoO109I	RGGNCCY	1 cut(s)	931
EcoRI	GAATTC	1 cut(s)	770
EcoRII	CCWGG	3 cut(s)	93, 226, 235
EcoT14I	CCWWGG	1 cut(s)	673
ErhI	CCWWGG	1 cut(s)	673
Esp3I	CGTCTC	1 cut(s)	124
FaeI	CATG	6 cut(s)	215, 353, 742, 811, 947, 992
FaqI	GGGAC	1 cut(s)	568
FatI	CATG	6 cut(s)	211, 349, 738, 807, 943, 988
FbaI	TGATCA	3 cut(s)	853, 940, 1002
Fnu4HI	GCNGC	2 cut(s)	284, 909
Fsp4HI	GCNGC	2 cut(s)	284, 909
GlaI	GCGC	3 cut(s)	136, 534, 621
GluI	GCNGC	2 cut(s)	284, 909
GsaI	CCCAGC	2 cut(s)	290, 346
GsuI	CTGGAG	2 cut(s)	203, 474
HaeII	RGCGCY	1 cut(s)	536
HaeIII	GGCC	3 cut(s)	93, 933, 965
HapII	CCGG	3 cut(s)	10, 52, 966
HgaI	GACGC	3 cut(s)	141, 288, 713
HhaI	GCGC	3 cut(s)	137, 535, 622
Hin1I	GRCGYC	1 cut(s)	396
Hin1II	CATG	6 cut(s)	215, 353, 742, 811, 947, 992
Hin6I	GCGC	3 cut(s)	135, 533, 620
HinP1I	GCGC	3 cut(s)	135, 533, 620
HincII	GTYRAC	1 cut(s)	703
HindII	GTYRAC	1 cut(s)	703
HindIII	AAGCTT	1 cut(s)	779
HinfI	GANTC	6 cut(s)	118, 187, 269, 581, 898, 1009
HpaII	CCGG	3 cut(s)	10, 52, 966
HphI	GGTGA	1 cut(s)	511
Hpy166II	GTNNAC	2 cut(s)	703, 866
Hpy188I	TCNGA	5 cut(s)	106, 515, 644, 776, 787
Hpy188III	TCNNGA	5 cut(s)	491, 549, 808, 902, 1006
Hpy8I	GTNNAC	2 cut(s)	703, 866
HpyAV	CCTTC	4 cut(s)	30, 46, 348, 490
HpyCH4III	ACNGT	3 cut(s)	101, 648, 1026
HpyCH4IV	ACGT	1 cut(s)	396
HpyCH4V	TGCA	7 cut(s)	153, 211, 415, 578, 698, 833, 871
HpyF10VI	GCNNNNNNNGC	2 cut(s)	10, 704
HpyF3I	CTNAG	2 cut(s)	40, 960
HpySE526I	ACGT	1 cut(s)	396
Hsp92I	GRCGYC	1 cut(s)	396
Hsp92II	CATG	6 cut(s)	215, 353, 742, 811, 947, 992
HspAI	GCGC	3 cut(s)	135, 533, 620
Ksp22I	TGATCA	3 cut(s)	853, 940, 1002
Kzo9I	GATC	4 cut(s)	199, 853, 940, 1002
LmnI	GCTCC	2 cut(s)	9, 346
Lsp1109I	GCAGC	2 cut(s)	270, 895
LweI	GCATC	1 cut(s)	895
MaeII	ACGT	1 cut(s)	396
MaeIII	GTNAC	4 cut(s)	164, 270, 304, 661
MalI	GATC	4 cut(s)	201, 855, 942, 1004
MboI	GATC	4 cut(s)	199, 853, 940, 1002
MboII	GAAGA	5 cut(s)	39, 139, 583, 595, 893
MfeI	CAATTG	1 cut(s)	918
MhlI	GDGCHC	1 cut(s)	447
MluCI	AATT	6 cut(s)	378, 410, 657, 770, 828, 918
MlyI	GAGTC	2 cut(s)	278, 590
MmeI	TCCRAC	2 cut(s)	227, 667
MnlI	CCTC	8 cut(s)	17, 477, 645, 761, 804, 922, 944, 955
MroXI	GAANNNNTTC	2 cut(s)	117, 781
MseI	TTAA	3 cut(s)	381, 480, 656
MspI	CCGG	3 cut(s)	10, 52, 966
MspR9I	CCNGG	4 cut(s)	52, 95, 228, 237
MunI	CAATTG	1 cut(s)	918
Mva1269I	GAATGC	1 cut(s)	803
MvaI	CCWGG	3 cut(s)	95, 228, 237
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	2 cut(s)	10, 704
NciI	CCSGG	1 cut(s)	52
NdeII	GATC	4 cut(s)	199, 853, 940, 1002
NlaIII	CATG	6 cut(s)	215, 353, 742, 811, 947, 992
NlaIV	GGNNCC	1 cut(s)	864
NmeAIII	GCCGAG	1 cut(s)	1009
NmuCI	GTSAC	3 cut(s)	270, 304, 661
NspI	RCATGY	2 cut(s)	215, 992
PagI	TCATGA	1 cut(s)	807
PctI	GAATGC	1 cut(s)	803
PdmI	GAANNNNTTC	2 cut(s)	117, 781
PfeI	GAWTC	4 cut(s)	118, 187, 898, 1009
PkrI	GCNGC	2 cut(s)	285, 910
PleI	GAGTC	2 cut(s)	277, 589
PpsI	GAGTC	2 cut(s)	277, 589
PshBI	ATTAAT	1 cut(s)	381
Psp6I	CCWGG	3 cut(s)	93, 226, 235
PspFI	CCCAGC	2 cut(s)	286, 342
PspGI	CCWGG	3 cut(s)	93, 226, 235
PspN4I	GGNNCC	1 cut(s)	864
PspPI	GGNCC	3 cut(s)	91, 863, 931
PstI	CTGCAG	1 cut(s)	700
PstNI	CAGNNNCTG	2 cut(s)	695, 908
RsaI	GTAC	2 cut(s)	731, 958
RsaNI	GTAC	2 cut(s)	730, 957
SaqAI	TTAA	3 cut(s)	381, 480, 656
SatI	GCNGC	2 cut(s)	284, 909
Sau3AI	GATC	4 cut(s)	199, 853, 940, 1002
Sau96I	GGNCC	3 cut(s)	91, 863, 931
SchI	GAGTC	2 cut(s)	278, 590
ScrFI	CCNGG	4 cut(s)	52, 95, 228, 237
SduI	GDGCHC	1 cut(s)	447
SfaNI	GCATC	1 cut(s)	895
SfcI	CTRYAG	1 cut(s)	696
SinI	GGWCC	1 cut(s)	863
Sse9I	AATT	6 cut(s)	378, 410, 657, 770, 828, 918
SspI	AATATT	1 cut(s)	506
StyD4I	CCNGG	4 cut(s)	50, 93, 226, 235
StyI	CCWWGG	1 cut(s)	673
TaaI	ACNGT	3 cut(s)	101, 648, 1026
TaiI	ACGT	1 cut(s)	399
TaqI	TCGA	2 cut(s)	190, 471
TasI	AATT	6 cut(s)	378, 410, 657, 770, 828, 918
TatI	WGTACW	1 cut(s)	956
TfiI	GAWTC	4 cut(s)	118, 187, 898, 1009
Tru1I	TTAA	3 cut(s)	381, 480, 656
Tru9I	TTAA	3 cut(s)	381, 480, 656
TscAI	CASTG	3 cut(s)	863, 873, 943
TseFI	GTSAC	3 cut(s)	270, 304, 661
TseI	GCWGC	2 cut(s)	283, 908
Tsp45I	GTSAC	3 cut(s)	270, 304, 661
TspDTI	ATGAA	4 cut(s)	435, 447, 796, 960
TspRI	CASTG	3 cut(s)	863, 873, 943
VpaK11BI	GGWCC	1 cut(s)	863
VspI	ATTAAT	1 cut(s)	381
XapI	RAATTY	1 cut(s)	770
XceI	RCATGY	2 cut(s)	215, 992
XmnI	GAANNNNTTC	2 cut(s)	117, 781
ZraI	GACGTC	1 cut(s)	397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.