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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66440 |
| fragaria_vesca | FvH4_1g12780 FvH4_7g02350 |
| malus_domestica | MD02G1143400.v1.1 |
| prunus_persica | Prupe.7G158300_v2.0.a1 |
| pyrus_communis | pycom15g22450 |
| rosa_chinensis | RchiOBHm_Chr2g0100901 |
| rosa_laevigata | RLG00000017022 |
| rosa_multiflora | Rmu_sc0000924.1_g000055 Rmu_sc0001659.1_g000047 Rmu_sc0002601.1_g000002 Rmu_sc0005742.1_g000014 Rmu_sc0008053.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00141750 Rroxscaffold_3G00251430 |
| rosa_rugosa | Rorug02G0093600 |
| rosa_samantha | Rh2AG141100 Rh2BG146300 Rh2CG147600 Rh2DG146800 Rh7CG310400 |
| rosa_wichuraiana | Rw2G011070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 299 |
| AatII | GACGTC | 1 cut(s) | 393 |
| AccB1I | GGYRCC | 2 cut(s) | 107, 296 |
| AccII | CGCG | 3 cut(s) | 47, 169, 171 |
| AccIII | TCCGGA | 1 cut(s) | 69 |
| AciI | CCGC | 7 cut(s) | 181, 265, 339, 351, 357, 476, 650 |
| AcoI | YGGCCR | 3 cut(s) | 462, 598, 738 |
| AcyI | GRCGYC | 3 cut(s) | 108, 297, 390 |
| AdeI | CACNNNGTG | 1 cut(s) | 25 |
| AfaI | GTAC | 2 cut(s) | 59, 428 |
| AgsI | TTSAA | 1 cut(s) | 715 |
| AjiI | CACGTC | 3 cut(s) | 25, 235, 271 |
| AjnI | CCWGG | 3 cut(s) | 128, 429, 726 |
| AluBI | AGCT | 6 cut(s) | 103, 313, 325, 574, 695, 762 |
| AluI | AGCT | 6 cut(s) | 103, 313, 325, 574, 695, 762 |
| Alw21I | GWGCWC | 1 cut(s) | 327 |
| Alw26I | GTCTC | 6 cut(s) | 130, 149, 378, 378, 581, 738 |
| Aor13HI | TCCGGA | 1 cut(s) | 69 |
| AoxI | GGCC | 3 cut(s) | 462, 598, 738 |
| ApeKI | GCWGC | 2 cut(s) | 354, 360 |
| AspLEI | GCGC | 5 cut(s) | 47, 110, 171, 299, 684 |
| AspS9I | GGNCC | 1 cut(s) | 132 |
| AsuHPI | GGTGA | 2 cut(s) | 466, 716 |
| AsuII | TTCGAA | 1 cut(s) | 368 |
| AvaII | GGWCC | 1 cut(s) | 132 |
| BalI | TGGCCA | 1 cut(s) | 740 |
| BanI | GGYRCC | 2 cut(s) | 107, 296 |
| BanII | GRGCYC | 2 cut(s) | 209, 327 |
| BbsI | GAAGAC | 2 cut(s) | 112, 211 |
| Bbv12I | GWGCWC | 1 cut(s) | 327 |
| BbvI | GCAGC | 2 cut(s) | 366, 372 |
| BccI | CCATC | 1 cut(s) | 158 |
| BceAI | ACGGC | 5 cut(s) | 284, 310, 352, 582, 593 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 31, 65 |
| BciT130I | CCWGG | 3 cut(s) | 130, 431, 728 |
| BcoDI | GTCTC | 6 cut(s) | 130, 149, 378, 378, 581, 738 |
| BfoI | RGCGCY | 2 cut(s) | 111, 300 |
| BisI | GCNGC | 4 cut(s) | 352, 355, 358, 361 |
| BlsI | GCNGC | 4 cut(s) | 353, 356, 359, 362 |
| Bme1390I | CCNGG | 3 cut(s) | 130, 431, 728 |
| Bme18I | GGWCC | 1 cut(s) | 132 |
| BmgBI | CACGTC | 3 cut(s) | 25, 235, 271 |
| BmgT120I | GGNCC | 1 cut(s) | 132 |
| BmiI | GGNNCC | 2 cut(s) | 109, 298 |
| BmrFI | CCNGG | 3 cut(s) | 130, 431, 728 |
| BmsI | GCATC | 2 cut(s) | 39, 254 |
| BpiI | GAAGAC | 2 cut(s) | 112, 211 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 443, 475 |
| Bpu14I | TTCGAA | 1 cut(s) | 368 |
| BpuEI | CTTGAG | 1 cut(s) | 242 |
| BsaHI | GRCGYC | 3 cut(s) | 108, 297, 390 |
| BsaI | GGTCTC | 1 cut(s) | 581 |
| BsaJI | CCNNGG | 3 cut(s) | 276, 450, 492 |
| BsaWI | WCCGGW | 1 cut(s) | 69 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 375, 405, 410, 440 |
| Bse118I | RCCGGY | 1 cut(s) | 110 |
| BseAI | TCCGGA | 1 cut(s) | 69 |
| BseBI | CCWGG | 3 cut(s) | 130, 431, 728 |
| BseDI | CCNNGG | 3 cut(s) | 276, 450, 492 |
| BseMII | CTCAG | 2 cut(s) | 389, 653 |
| BseRI | GAGGAG | 6 cut(s) | 176, 335, 425, 428, 431, 686 |
| BseXI | GCAGC | 2 cut(s) | 366, 372 |
| Bsh1236I | CGCG | 3 cut(s) | 47, 169, 171 |
| Bsh1285I | CGRYCG | 1 cut(s) | 584 |
| BshFI | GGCC | 3 cut(s) | 464, 600, 740 |
| BshNI | GGYRCC | 2 cut(s) | 107, 296 |
| BsiEI | CGRYCG | 1 cut(s) | 584 |
| BsiHKAI | GWGCWC | 1 cut(s) | 327 |
| BsiSI | CCGG | 4 cut(s) | 70, 111, 192, 601 |
| BslFI | GGGAC | 1 cut(s) | 247 |
| BsmAI | GTCTC | 6 cut(s) | 130, 149, 378, 378, 581, 738 |
| BsmBI | CGTCTC | 3 cut(s) | 130, 149, 378 |
| BsmFI | GGGAC | 1 cut(s) | 247 |
| BsmI | GAATGC | 1 cut(s) | 619 |
| BsnI | GGCC | 3 cut(s) | 464, 600, 740 |
| Bso31I | GGTCTC | 1 cut(s) | 581 |
| Bsp119I | TTCGAA | 1 cut(s) | 368 |
| Bsp1286I | GDGCHC | 2 cut(s) | 209, 327 |
| Bsp13I | TCCGGA | 1 cut(s) | 69 |
| Bsp143I | GATC | 2 cut(s) | 441, 581 |
| BspACI | CCGC | 7 cut(s) | 181, 265, 339, 351, 357, 476, 650 |
| BspANI | GGCC | 3 cut(s) | 464, 600, 740 |
| BspCNI | CTCAG | 2 cut(s) | 388, 654 |
| BspEI | TCCGGA | 1 cut(s) | 69 |
| BspFNI | CGCG | 3 cut(s) | 47, 169, 171 |
| BspLI | GGNNCC | 2 cut(s) | 109, 298 |
| BspQI | GCTCTTC | 1 cut(s) | 752 |
| BspT104I | TTCGAA | 1 cut(s) | 368 |
| BspT107I | GGYRCC | 2 cut(s) | 107, 296 |
| BspTNI | GGTCTC | 1 cut(s) | 581 |
| BsrFI | RCCGGY | 1 cut(s) | 110 |
| BssAI | RCCGGY | 1 cut(s) | 110 |
| BssECI | CCNNGG | 3 cut(s) | 276, 450, 492 |
| BssMI | GATC | 2 cut(s) | 441, 581 |
| BssNI | GRCGYC | 3 cut(s) | 108, 297, 390 |
| Bst2UI | CCWGG | 3 cut(s) | 130, 431, 728 |
| Bst6I | CTCTTC | 2 cut(s) | 218, 752 |
| BstACI | GRCGYC | 3 cut(s) | 108, 297, 390 |
| BstBI | TTCGAA | 1 cut(s) | 368 |
| BstC8I | GCNNGC | 3 cut(s) | 43, 112, 619 |
| BstDEI | CTNAG | 2 cut(s) | 375, 662 |
| BstFNI | CGCG | 3 cut(s) | 47, 169, 171 |
| BstH2I | RGCGCY | 2 cut(s) | 111, 300 |
| BstHHI | GCGC | 5 cut(s) | 47, 110, 171, 299, 684 |
| BstKTI | GATC | 2 cut(s) | 444, 584 |
| BstMAI | GTCTC | 6 cut(s) | 130, 149, 378, 378, 581, 738 |
| BstMBI | GATC | 2 cut(s) | 441, 581 |
| BstMCI | CGRYCG | 1 cut(s) | 584 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 38, 72, 305, 357, 360 |
| BstNI | CCWGG | 3 cut(s) | 130, 431, 728 |
| BstSCI | CCNGG | 3 cut(s) | 128, 429, 726 |
| BstUI | CGCG | 3 cut(s) | 47, 169, 171 |
| BstV1I | GCAGC | 2 cut(s) | 366, 372 |
| BstV2I | GAAGAC | 2 cut(s) | 112, 211 |
| BsuRI | GGCC | 3 cut(s) | 464, 600, 740 |
| BtgZI | GCGATG | 3 cut(s) | 62, 136, 226 |
| BtrI | CACGTC | 3 cut(s) | 25, 235, 271 |
| BtsIMutI | CAGTG | 1 cut(s) | 480 |
| Cac8I | GCNNGC | 3 cut(s) | 43, 112, 619 |
| CfoI | GCGC | 5 cut(s) | 47, 110, 171, 299, 684 |
| Cfr10I | RCCGGY | 1 cut(s) | 110 |
| Cfr13I | GGNCC | 1 cut(s) | 132 |
| Csp6I | GTAC | 2 cut(s) | 58, 427 |
| CviAII | CATG | 1 cut(s) | 610 |
| CviQI | GTAC | 2 cut(s) | 58, 427 |
| DdeI | CTNAG | 2 cut(s) | 375, 662 |
| DinI | GGCGCC | 2 cut(s) | 109, 298 |
| DpnI | GATC | 2 cut(s) | 443, 583 |
| DpnII | GATC | 2 cut(s) | 441, 581 |
| DraIII | CACNNNGTG | 1 cut(s) | 25 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 299 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 299 |
| EaeI | YGGCCR | 3 cut(s) | 462, 598, 738 |
| Eam1104I | CTCTTC | 2 cut(s) | 218, 752 |
| EarI | CTCTTC | 2 cut(s) | 218, 752 |
| EciI | GGCGGA | 2 cut(s) | 170, 665 |
| Ecl136II | GAGCTC | 1 cut(s) | 325 |
| Eco24I | GRGCYC | 2 cut(s) | 209, 327 |
| Eco31I | GGTCTC | 1 cut(s) | 581 |
| Eco47I | GGWCC | 1 cut(s) | 132 |
| Eco53kI | GAGCTC | 1 cut(s) | 325 |
| EcoICRI | GAGCTC | 1 cut(s) | 325 |
| EcoRII | CCWGG | 3 cut(s) | 128, 429, 726 |
| EcoT38I | GRGCYC | 2 cut(s) | 209, 327 |
| EgeI | GGCGCC | 2 cut(s) | 109, 298 |
| EheI | GGCGCC | 2 cut(s) | 109, 298 |
| Esp3I | CGTCTC | 3 cut(s) | 130, 149, 378 |
| FaeI | CATG | 1 cut(s) | 613 |
| FaiI | YATR | 5 cut(s) | 285, 611, 644, 689, 701 |
| FaqI | GGGAC | 1 cut(s) | 247 |
| FatI | CATG | 1 cut(s) | 609 |
| FauI | CCCGC | 1 cut(s) | 272 |
| Fnu4HI | GCNGC | 4 cut(s) | 352, 355, 358, 361 |
| FriOI | GRGCYC | 2 cut(s) | 209, 327 |
| Fsp4HI | GCNGC | 4 cut(s) | 352, 355, 358, 361 |
| GlaI | GCGC | 5 cut(s) | 46, 109, 170, 298, 683 |
| GluI | GCNGC | 4 cut(s) | 352, 355, 358, 361 |
| HaeII | RGCGCY | 2 cut(s) | 111, 300 |
| HaeIII | GGCC | 3 cut(s) | 464, 600, 740 |
| HapII | CCGG | 4 cut(s) | 70, 111, 192, 601 |
| HhaI | GCGC | 5 cut(s) | 47, 110, 171, 299, 684 |
| Hin1I | GRCGYC | 3 cut(s) | 108, 297, 390 |
| Hin1II | CATG | 1 cut(s) | 613 |
| Hin6I | GCGC | 5 cut(s) | 45, 108, 169, 297, 682 |
| HinP1I | GCGC | 5 cut(s) | 45, 108, 169, 297, 682 |
| HindIII | AAGCTT | 1 cut(s) | 693 |
| HinfI | GANTC | 4 cut(s) | 485, 497, 503, 731 |
| HpaII | CCGG | 4 cut(s) | 70, 111, 192, 601 |
| HphI | GGTGA | 2 cut(s) | 466, 716 |
| Hpy166II | GTNNAC | 2 cut(s) | 427, 457 |
| Hpy188III | TCNNGA | 2 cut(s) | 70, 550 |
| Hpy8I | GTNNAC | 2 cut(s) | 427, 457 |
| Hpy99I | CGWCG | 5 cut(s) | 26, 275, 296, 305, 392 |
| HpyAV | CCTTC | 2 cut(s) | 48, 145 |
| HpyCH4IV | ACGT | 4 cut(s) | 24, 234, 270, 390 |
| HpyCH4V | TGCA | 1 cut(s) | 617 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 38, 72, 305, 357, 360 |
| HpyF3I | CTNAG | 2 cut(s) | 375, 662 |
| HpySE526I | ACGT | 4 cut(s) | 24, 234, 270, 390 |
| Hsp92I | GRCGYC | 3 cut(s) | 108, 297, 390 |
| Hsp92II | CATG | 1 cut(s) | 613 |
| HspAI | GCGC | 5 cut(s) | 45, 108, 169, 297, 682 |
| KasI | GGCGCC | 2 cut(s) | 107, 296 |
| Kpn2I | TCCGGA | 1 cut(s) | 69 |
| KroI | GCCGGC | 1 cut(s) | 110 |
| KroNI | GCCGGC | 1 cut(s) | 112 |
| Kzo9I | GATC | 2 cut(s) | 441, 581 |
| LguI | GCTCTTC | 1 cut(s) | 752 |
| LmnI | GCTCC | 2 cut(s) | 72, 322 |
| Lsp1109I | GCAGC | 2 cut(s) | 366, 372 |
| LweI | GCATC | 2 cut(s) | 39, 254 |
| MaeII | ACGT | 4 cut(s) | 24, 234, 270, 390 |
| MaeIII | GTNAC | 2 cut(s) | 665, 722 |
| MalI | GATC | 2 cut(s) | 443, 583 |
| MboI | GATC | 2 cut(s) | 441, 581 |
| MboII | GAAGA | 6 cut(s) | 112, 205, 211, 214, 529, 740 |
| MhlI | GDGCHC | 2 cut(s) | 209, 327 |
| MlsI | TGGCCA | 1 cut(s) | 740 |
| MluNI | TGGCCA | 1 cut(s) | 740 |
| Mly113I | GGCGCC | 2 cut(s) | 108, 297 |
| MlyI | GAGTC | 3 cut(s) | 479, 491, 740 |
| MmeI | TCCRAC | 1 cut(s) | 519 |
| Mox20I | TGGCCA | 1 cut(s) | 740 |
| MreI | CGCCGGCG | 1 cut(s) | 110 |
| MroI | TCCGGA | 1 cut(s) | 69 |
| MroNI | GCCGGC | 1 cut(s) | 110 |
| MscI | TGGCCA | 1 cut(s) | 740 |
| Msp20I | TGGCCA | 1 cut(s) | 740 |
| MspA1I | CMGCKG | 1 cut(s) | 357 |
| MspI | CCGG | 4 cut(s) | 70, 111, 192, 601 |
| MspR9I | CCNGG | 3 cut(s) | 130, 431, 728 |
| Mva1269I | GAATGC | 1 cut(s) | 619 |
| MvaI | CCWGG | 3 cut(s) | 130, 431, 728 |
| MvnI | CGCG | 3 cut(s) | 47, 169, 171 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 38, 72, 305, 357, 360 |
| NaeI | GCCGGC | 1 cut(s) | 112 |
| NarI | GGCGCC | 2 cut(s) | 108, 297 |
| NdeII | GATC | 2 cut(s) | 441, 581 |
| NgoMIV | GCCGGC | 1 cut(s) | 110 |
| NlaIII | CATG | 1 cut(s) | 613 |
| NlaIV | GGNNCC | 2 cut(s) | 109, 298 |
| NmeAIII | GCCGAG | 3 cut(s) | 124, 257, 440 |
| NmuCI | GTSAC | 1 cut(s) | 722 |
| NspV | TTCGAA | 1 cut(s) | 368 |
| PciSI | GCTCTTC | 1 cut(s) | 752 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 249, 297, 300, 512 |
| PctI | GAATGC | 1 cut(s) | 619 |
| PdiI | GCCGGC | 1 cut(s) | 112 |
| PfeI | GAWTC | 1 cut(s) | 503 |
| PflFI | GACNNNGTC | 1 cut(s) | 389 |
| PfoI | TCCNGGA | 1 cut(s) | 128 |
| PkrI | GCNGC | 4 cut(s) | 353, 356, 359, 362 |
| Ple19I | CGATCG | 1 cut(s) | 584 |
| PleI | GAGTC | 3 cut(s) | 479, 491, 739 |
| PluTI | GGCGCC | 2 cut(s) | 111, 300 |
| PpsI | GAGTC | 3 cut(s) | 479, 491, 739 |
| Psp124BI | GAGCTC | 1 cut(s) | 327 |
| Psp6I | CCWGG | 3 cut(s) | 128, 429, 726 |
| PspGI | CCWGG | 3 cut(s) | 128, 429, 726 |
| PspN4I | GGNNCC | 2 cut(s) | 109, 298 |
| PspPI | GGNCC | 1 cut(s) | 132 |
| PsyI | GACNNNGTC | 1 cut(s) | 389 |
| PvuI | CGATCG | 1 cut(s) | 584 |
| RsaI | GTAC | 2 cut(s) | 59, 428 |
| RsaNI | GTAC | 2 cut(s) | 58, 427 |
| SacI | GAGCTC | 1 cut(s) | 327 |
| SapI | GCTCTTC | 1 cut(s) | 752 |
| SatI | GCNGC | 4 cut(s) | 352, 355, 358, 361 |
| Sau3AI | GATC | 2 cut(s) | 441, 581 |
| Sau96I | GGNCC | 1 cut(s) | 132 |
| SchI | GAGTC | 3 cut(s) | 479, 491, 740 |
| ScrFI | CCNGG | 3 cut(s) | 130, 431, 728 |
| SduI | GDGCHC | 2 cut(s) | 209, 327 |
| SfaNI | GCATC | 2 cut(s) | 39, 254 |
| SfoI | GGCGCC | 2 cut(s) | 109, 298 |
| SfuI | TTCGAA | 1 cut(s) | 368 |
| SgrAI | CRCCGGYG | 1 cut(s) | 110 |
| SinI | GGWCC | 1 cut(s) | 132 |
| SmlI | CTYRAG | 1 cut(s) | 257 |
| SmoI | CTYRAG | 1 cut(s) | 257 |
| SsiI | CCGC | 7 cut(s) | 181, 265, 339, 351, 357, 476, 650 |
| SspDI | GGCGCC | 2 cut(s) | 107, 296 |
| SstI | GAGCTC | 1 cut(s) | 327 |
| StyD4I | CCNGG | 3 cut(s) | 128, 429, 726 |
| TaiI | ACGT | 4 cut(s) | 27, 237, 273, 393 |
| TaqI | TCGA | 5 cut(s) | 203, 303, 330, 368, 549 |
| TaqII | GACCGA | 1 cut(s) | 605 |
| TauI | GCSGC | 2 cut(s) | 354, 360 |
| TfiI | GAWTC | 1 cut(s) | 503 |
| TscAI | CASTG | 1 cut(s) | 487 |
| TseFI | GTSAC | 1 cut(s) | 722 |
| TseI | GCWGC | 2 cut(s) | 354, 360 |
| Tsp45I | GTSAC | 1 cut(s) | 722 |
| TspDTI | ATGAA | 2 cut(s) | 626, 688 |
| TspRI | CASTG | 1 cut(s) | 487 |
| Tth111I | GACNNNGTC | 1 cut(s) | 389 |
| VpaK11BI | GGWCC | 1 cut(s) | 132 |
| ZraI | GACGTC | 1 cut(s) | 391 |