Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007566

Physical Location & Seq

Genomic Coordinates Reverse (-)

17576263 .. 17577333

Gene Structure 1071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G178100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 936 bp

ATGAAAAGAGCAACAATGGCTTCATTCTCTGCAAAGCCTTCAAAGCGATACAATGTTCGATCTATTAGTTTGCCTGTTAGATCACATCCCAGCACACTCAGAACAGAAGAAGAGTTGAACAAGCTCAAGGCTTGGGAGGCAACAACAACAACATCAGAAGCAAAAGCAGATTCAATATGCAAGGGGCTAGGTGGGCTTAAAGACTTGTACATTTGTATTGAGGATCTTCTTCAATTGCCAATGACACAACAGGCCCTAGCCCTGCATCAAAATGAGAGATGGGTTGAAGAATTGCTGGATGGTTCTGTCAACTACTTGGATGTGTGTTGCAACACAAGGGATACCATTTTGGCAATGAAGGAGAGTGTTAGGGATCTTCAATCTGCGCTTCGGCGCAGAAAAGTTGGAGGAGATTCAAGCCTTGAAGACAATTTGAGTTCATATACATGCATAAGGAAAAAGACCAAGAAGGAAATTCTGCAGCTTGTAGCATCATTGAAGCAAATGGATCACAAGCATGAAGCCTTCCCTTTGGATCTAGACAACCATCTCGCCGCGGTGGTGAGGGTGCTCAGAGAGGCAAGTTTGATCACCAGTTCTGTTTTCCAGTCACTTGTTTCTTTCCTCTCCACACCAGTTTTGAAGCCAAGGCCTAGCAGATGGTCTCTCGTTTCAATTTTGGTGCAGAAAGGGGTTTTGAAGTGTGAAAACAACCAACACAAAAGCATGAACGAGCTGGAAAATGTAGATATTGCAATTGGCAACGTGCTTGTGAATCAAGCAAGTGAAGATATTGAAGCTGAGAAGATTCAATCTGCACAGAGAAGATTGAAGGTTTTGGATTCAAGCATGGAAGGCCTTGAAAATGGTTTGGAGGGCTTATTTAGGCTCTTGATCCGCACCAGAGTTTCTCTCCTAAACATACTTTCTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF241

Protein Analysis

312

Amino Acids

34.93

Weight (kDa)

8.82

Isoelectric Point (pI)

55.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35720
fragaria_vesca	FvH4_1g10720 FvH4_1g10730
malus_domestica	MD02G1121200.v1.1 MD15G1235000.v1.1
prunus_persica	Prupe.7G178100_v2.0.a1
pyrus_communis	pycom15g20920
rosa_chinensis	RchiOBHm_Chr2g0097881 RchiOBHm_Chr2g0097891
rosa_laevigata	RLG00000016743
rosa_multiflora	Rmu_co8303561.1_g000001 Rmu_sc0009572.1_g000010
rosa_roxburghii	Rroxscaffold_2G00144470
rosa_rugosa	Rorug02G0069000
rosa_samantha	Rh2AG115700 Rh2AG115800 Rh2BG118600 Rh2BG118700 Rh2CG120100 Rh2CG120300 Rh2DG119900 Rh2DG120000
rosa_wichuraiana	Rw2G009050 Rw2G009060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	557
AciI	CCGC	3 cut(s)	555, 557, 898
AclWI	GGATC	5 cut(s)	231, 381, 516, 543, 889
AcsI	RAATTY	1 cut(s)	474
AfaI	GTAC	1 cut(s)	209
AluBI	AGCT	4 cut(s)	124, 484, 736, 800
AluI	AGCT	4 cut(s)	124, 484, 736, 800
Alw21I	GWGCWC	1 cut(s)	573
Alw26I	GTCTC	1 cut(s)	669
AlwI	GGATC	5 cut(s)	231, 381, 516, 543, 889
AoxI	GGCC	3 cut(s)	252, 650, 856
ApeKI	GCWGC	1 cut(s)	481
ApoI	RAATTY	1 cut(s)	474
AspLEI	GCGC	2 cut(s)	388, 396
AspS9I	GGNCC	1 cut(s)	253
AsuHPI	GGTGA	2 cut(s)	574, 583
BbsI	GAAGAC	1 cut(s)	432
Bbv12I	GWGCWC	1 cut(s)	573
BbvI	GCAGC	1 cut(s)	493
BccI	CCATC	4 cut(s)	273, 293, 555, 654
BciVI	GTATCC	1 cut(s)	334
BclI	TGATCA	1 cut(s)	588
BcoDI	GTCTC	1 cut(s)	669
BfaI	CTAG	4 cut(s)	188, 257, 539, 654
BfmI	CTRYAG	1 cut(s)	479
BfuI	GTATCC	1 cut(s)	334
BisI	GCNGC	2 cut(s)	482, 555
BlsI	GCNGC	2 cut(s)	483, 556
BmgT120I	GGNCC	1 cut(s)	253
BmsI	GCATC	2 cut(s)	274, 500
BpiI	GAAGAC	1 cut(s)	432
BplI	GAGNNNNNCTC	2 cut(s)	897, 929
BpuEI	CTTGAG	1 cut(s)	110
BsaI	GGTCTC	1 cut(s)	669
BsaJI	CCNNGG	2 cut(s)	555, 647
Bse1I	ACTGG	3 cut(s)	594, 607, 635
Bse3DI	GCAATG	1 cut(s)	360
BseDI	CCNNGG	2 cut(s)	555, 647
BseGI	GGATG	3 cut(s)	85, 304, 325
BseMI	GCAATG	1 cut(s)	360
BseMII	CTCAG	3 cut(s)	112, 586, 792
BseNI	ACTGG	3 cut(s)	594, 607, 635
BseRI	GAGGAG	1 cut(s)	423
BseXI	GCAGC	1 cut(s)	493
BseYI	CCCAGC	1 cut(s)	89
BsgI	GTGCAG	2 cut(s)	704, 801
Bsh1236I	CGCG	1 cut(s)	557
BshFI	GGCC	3 cut(s)	254, 652, 858
BsiHKAI	GWGCWC	1 cut(s)	573
BsmAI	GTCTC	1 cut(s)	669
BsnI	GGCC	3 cut(s)	254, 652, 858
Bso31I	GGTCTC	1 cut(s)	669
Bsp1286I	GDGCHC	1 cut(s)	573
Bsp1407I	TGTACA	1 cut(s)	207
Bsp143I	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
BspACI	CCGC	3 cut(s)	555, 557, 898
BspANI	GGCC	3 cut(s)	254, 652, 858
BspCNI	CTCAG	3 cut(s)	111, 585, 793
BspFNI	CGCG	1 cut(s)	557
BspMAI	CTGCAG	1 cut(s)	483
BspPI	GGATC	5 cut(s)	231, 381, 516, 543, 889
BspTNI	GGTCTC	1 cut(s)	669
BsrDI	GCAATG	1 cut(s)	360
BsrGI	TGTACA	1 cut(s)	207
BsrI	ACTGG	3 cut(s)	594, 607, 635
BssECI	CCNNGG	2 cut(s)	555, 647
BssMI	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
BssT1I	CCWWGG	1 cut(s)	647
Bst6I	CTCTTC	1 cut(s)	105
BstAUI	TGTACA	1 cut(s)	207
BstDEI	CTNAG	3 cut(s)	98, 572, 801
BstDSI	CCRYGG	1 cut(s)	555
BstF5I	GGATG	3 cut(s)	85, 304, 325
BstFNI	CGCG	1 cut(s)	557
BstHHI	GCGC	2 cut(s)	388, 396
BstKTI	GATC	8 cut(s)	62, 83, 226, 376, 511, 538, 591, 897
BstMAI	GTCTC	1 cut(s)	669
BstMBI	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
BstMWI	GCNNNNNNNGC	5 cut(s)	17, 43, 137, 193, 855
BstNSI	RCATGY	1 cut(s)	450
BstSFI	CTRYAG	1 cut(s)	479
BstUI	CGCG	1 cut(s)	557
BstV1I	GCAGC	1 cut(s)	493
BstV2I	GAAGAC	1 cut(s)	432
BstX2I	RGATCY	3 cut(s)	223, 373, 535
BstYI	RGATCY	3 cut(s)	223, 373, 535
BsuI	GTATCC	1 cut(s)	334
BsuRI	GGCC	3 cut(s)	254, 652, 858
BtgI	CCRYGG	1 cut(s)	555
BtsCI	GGATG	3 cut(s)	85, 304, 325
CfoI	GCGC	2 cut(s)	388, 396
Cfr13I	GGNCC	1 cut(s)	253
Cfr42I	CCGCGG	1 cut(s)	558
Csp6I	GTAC	1 cut(s)	208
CviAII	CATG	4 cut(s)	447, 518, 727, 850
CviQI	GTAC	1 cut(s)	208
DdeI	CTNAG	3 cut(s)	98, 572, 801
DpnI	GATC	8 cut(s)	61, 82, 225, 375, 510, 537, 590, 896
DpnII	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
Eam1104I	CTCTTC	1 cut(s)	105
EarI	CTCTTC	1 cut(s)	105
Eco130I	CCWWGG	1 cut(s)	647
Eco147I	AGGCCT	2 cut(s)	652, 858
Eco31I	GGTCTC	1 cut(s)	669
EcoO109I	RGGNCCY	1 cut(s)	253
EcoT14I	CCWWGG	1 cut(s)	647
EcoT22I	ATGCAT	1 cut(s)	452
ErhI	CCWWGG	1 cut(s)	647
FaeI	CATG	4 cut(s)	450, 521, 730, 853
FaiI	YATR	9 cut(s)	178, 442, 444, 448, 452, 519, 728, 851, 923
FatI	CATG	4 cut(s)	446, 517, 726, 849
FbaI	TGATCA	1 cut(s)	588
Fnu4HI	GCNGC	2 cut(s)	482, 555
FokI	GGATG	3 cut(s)	72, 311, 332
Fsp4HI	GCNGC	2 cut(s)	482, 555
FspBI	CTAG	4 cut(s)	188, 257, 539, 654
GlaI	GCGC	2 cut(s)	387, 395
GluI	GCNGC	2 cut(s)	482, 555
GsaI	CCCAGC	1 cut(s)	93
HaeIII	GGCC	3 cut(s)	254, 652, 858
HhaI	GCGC	2 cut(s)	388, 396
Hin1II	CATG	4 cut(s)	450, 521, 730, 853
Hin6I	GCGC	2 cut(s)	386, 394
HinP1I	GCGC	2 cut(s)	386, 394
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HinfI	GANTC	5 cut(s)	170, 413, 775, 808, 842
HphI	GGTGA	2 cut(s)	574, 583
Hpy166II	GTNNAC	1 cut(s)	310
Hpy188I	TCNGA	3 cut(s)	101, 157, 575
Hpy188III	TCNNGA	2 cut(s)	539, 892
Hpy8I	GTNNAC	1 cut(s)	310
HpyAV	CCTTC	6 cut(s)	48, 352, 463, 535, 826, 848
HpyCH4IV	ACGT	1 cut(s)	765
HpyCH4V	TGCA	9 cut(s)	32, 180, 265, 330, 450, 481, 685, 755, 818
HpyF10VI	GCNNNNNNNGC	5 cut(s)	17, 43, 137, 193, 855
HpyF3I	CTNAG	3 cut(s)	98, 572, 801
HpySE526I	ACGT	1 cut(s)	765
Hsp92II	CATG	4 cut(s)	450, 521, 730, 853
HspAI	GCGC	2 cut(s)	386, 394
Ksp22I	TGATCA	1 cut(s)	588
KspI	CCGCGG	1 cut(s)	558
Kzo9I	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
Lsp1109I	GCAGC	1 cut(s)	493
LweI	GCATC	2 cut(s)	274, 500
MaeI	CTAG	4 cut(s)	188, 257, 539, 654
MaeII	ACGT	1 cut(s)	765
MaeIII	GTNAC	1 cut(s)	609
MalI	GATC	8 cut(s)	61, 82, 225, 375, 510, 537, 590, 896
MboI	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
MfeI	CAATTG	2 cut(s)	233, 756
MflI	RGATCY	3 cut(s)	223, 373, 535
MhlI	GDGCHC	1 cut(s)	573
MluCI	AATT	6 cut(s)	233, 290, 430, 474, 675, 756
MmeI	TCCRAC	1 cut(s)	385
MnlI	CCTC	7 cut(s)	130, 214, 401, 558, 571, 635, 868
Mph1103I	ATGCAT	1 cut(s)	452
MseI	TTAA	1 cut(s)	198
MslI	CAYNNNNRTG	3 cut(s)	270, 445, 516
MspA1I	CMGCKG	1 cut(s)	557
MunI	CAATTG	2 cut(s)	233, 756
MvnI	CGCG	1 cut(s)	557
MwoI	GCNNNNNNNGC	5 cut(s)	17, 43, 137, 193, 855
NdeII	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
NlaIII	CATG	4 cut(s)	450, 521, 730, 853
NmuCI	GTSAC	1 cut(s)	609
NsiI	ATGCAT	1 cut(s)	452
NspI	RCATGY	1 cut(s)	450
PceI	AGGCCT	2 cut(s)	652, 858
PfeI	GAWTC	5 cut(s)	170, 413, 775, 808, 842
PkrI	GCNGC	2 cut(s)	483, 556
PspFI	CCCAGC	1 cut(s)	89
PspPI	GGNCC	1 cut(s)	253
PstI	CTGCAG	1 cut(s)	483
PsuI	RGATCY	3 cut(s)	223, 373, 535
RsaI	GTAC	1 cut(s)	209
RsaNI	GTAC	1 cut(s)	208
RseI	CAYNNNNRTG	3 cut(s)	270, 445, 516
SacII	CCGCGG	1 cut(s)	558
SaqAI	TTAA	1 cut(s)	198
SatI	GCNGC	2 cut(s)	482, 555
Sau3AI	GATC	8 cut(s)	59, 80, 223, 373, 508, 535, 588, 894
Sau96I	GGNCC	1 cut(s)	253
SduI	GDGCHC	1 cut(s)	573
SetI	ASST	7 cut(s)	126, 193, 486, 738, 768, 802, 837
SfaNI	GCATC	2 cut(s)	274, 500
SfcI	CTRYAG	1 cut(s)	479
Sfr303I	CCGCGG	1 cut(s)	558
SgrBI	CCGCGG	1 cut(s)	558
SmiMI	CAYNNNNRTG	3 cut(s)	270, 445, 516
SmlI	CTYRAG	1 cut(s)	125
SmoI	CTYRAG	1 cut(s)	125
Sse9I	AATT	6 cut(s)	233, 290, 430, 474, 675, 756
SseBI	AGGCCT	2 cut(s)	652, 858
SsiI	CCGC	3 cut(s)	555, 557, 898
SspMI	CTAG	4 cut(s)	188, 257, 539, 654
StuI	AGGCCT	2 cut(s)	652, 858
StyI	CCWWGG	1 cut(s)	647
TaiI	ACGT	1 cut(s)	768
TaqI	TCGA	1 cut(s)	58
TasI	AATT	6 cut(s)	233, 290, 430, 474, 675, 756
TatI	WGTACW	1 cut(s)	207
TauI	GCSGC	1 cut(s)	557
TfiI	GAWTC	5 cut(s)	170, 413, 775, 808, 842
Tru1I	TTAA	1 cut(s)	198
Tru9I	TTAA	1 cut(s)	198
TseFI	GTSAC	1 cut(s)	609
TseI	GCWGC	1 cut(s)	481
Tsp45I	GTSAC	1 cut(s)	609
TspDTI	ATGAA	6 cut(s)	12, 17, 371, 429, 534, 743
XapI	RAATTY	1 cut(s)	474
XbaI	TCTAGA	1 cut(s)	538
XceI	RCATGY	1 cut(s)	450
XspI	CTAG	4 cut(s)	188, 257, 539, 654
Zsp2I	ATGCAT	1 cut(s)	452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.