Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006645

Physical Location & Seq

Genomic Coordinates Forward (+)

19807472 .. 19808290

Gene Structure 819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G221700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 627 bp

ATGTTAGGACATCCTTGCAAAAGGAAAAGGGAAAAAACAAAAACATTCATTGTTAGCTTTCTTTCTTGTGTTGTGGTCTTGGAGACTTGGGAGTTCTTGCAAAACAGAATGGCGAATGAGAAACAATTGAAATGGGAAGGCAAGGCTAGTGCGGAGCTCAATGGCCCAGAAGCAGAACAAGTGTGGCCTCTTTTGGAGGACTTCTTTGGCCTGCACAAGTGGTTCCCAACTCTCACAACTTGCCTTGGTGTTGAAGGCATATCAGGGCAACCCGGTTGTGTGCGCTACTGCGCTGGGTTCAAGACTCCTGTTGACCATAAGAGAGAGCAAGACCAAGACCAAGAGAAGGTGAATTGGACCAAGCAGAAGCTGCTTTCTATAGACCCAGCACAACTGATATTTAGCTATTCTATTATAGATGGGAATGTTGGGTTCAACTCATACATTTCAACTGTGCAAGTGGTTCCAAAGGAAGGTGGCTGCAGCATCGTGTGGAAGTATGAAGTTGAACCCGTGGAGGGGTGGAAAATGGAGGATCTGGACATGTTTATTGGCACAGGCTTGCAAGTCATGGCTAGCAGAATGGAAGCCTCTCTCCAACTCCAAGTTGGGCCACTGGAACCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Polyketide_cyc2

Protein Analysis

209

Amino Acids

23.59

Weight (kDa)

5.34

Isoelectric Point (pI)

35.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25770 AT2G25770
fragaria_vesca	FvH4_1g05920
malus_domestica	MD02G1061100.v1.1 MD02G1061300.v1.1 MD02G1064000.v1.1 MD08G1112000.v1.1 MD08G1112100.v1.1
prunus_persica	Prupe.7G221700_v2.0.a1
pyrus_communis	pycom08g09310 pycom15g17420
rosa_chinensis	RchiOBHm_Chr2g0091561 RchiOBHm_Chr2g0091641
rosa_laevigata	RLG00000016237 RLG00000016238
rosa_multiflora	Rmu_sc0000897.1_g000017
rosa_roxburghii	Rroxscaffold_2G00149890 Rroxscaffold_2G00149910
rosa_rugosa	Rorug02G0018700
rosa_samantha	Rh2AG064000 Rh2AG064100 Rh2BG063400 Rh2CG065100 Rh2DG063500
rosa_wichuraiana	Rw2G005630 Rw2G005640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	152
AclWI	GGATC	1 cut(s)	543
AfiI	CCNNNNNNNGG	4 cut(s)	346, 473, 518, 519
AflIII	ACRYGT	1 cut(s)	543
AgsI	TTSAA	6 cut(s)	130, 254, 301, 436, 450, 509
AluBI	AGCT	4 cut(s)	57, 157, 370, 405
AluI	AGCT	4 cut(s)	57, 157, 370, 405
Alw21I	GWGCWC	1 cut(s)	159
Alw26I	GTCTC	1 cut(s)	77
AlwI	GGATC	1 cut(s)	543
AlwNI	CAGNNNCTG	1 cut(s)	370
AoxI	GGCC	4 cut(s)	163, 185, 208, 611
ApeKI	GCWGC	3 cut(s)	370, 480, 483
AspLEI	GCGC	2 cut(s)	285, 293
AspS9I	GGNCC	3 cut(s)	164, 357, 611
AsuC2I	CCSGG	1 cut(s)	273
AsuHPI	GGTGA	1 cut(s)	361
AsuNHI	GCTAGC	1 cut(s)	575
AvaII	GGWCC	1 cut(s)	357
BanII	GRGCYC	1 cut(s)	159
Bbv12I	GWGCWC	1 cut(s)	159
BbvI	GCAGC	3 cut(s)	357, 467, 495
BccI	CCATC	1 cut(s)	413
BcnI	CCSGG	1 cut(s)	273
BcoDI	GTCTC	1 cut(s)	77
BfaI	CTAG	2 cut(s)	147, 576
BfmI	CTRYAG	2 cut(s)	378, 481
BisI	GCNGC	3 cut(s)	371, 481, 484
BlsI	GCNGC	3 cut(s)	372, 482, 485
Bme1390I	CCNGG	1 cut(s)	273
Bme18I	GGWCC	1 cut(s)	357
BmgT120I	GGNCC	3 cut(s)	164, 357, 611
BmiI	GGNNCC	3 cut(s)	224, 465, 621
BmrFI	CCNGG	1 cut(s)	273
BmsI	GCATC	1 cut(s)	495
BmtI	GCTAGC	1 cut(s)	579
BpuMI	CCSGG	1 cut(s)	273
BsaJI	CCNNGG	2 cut(s)	244, 513
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 473, 518, 519
Bse1I	ACTGG	1 cut(s)	621
BseDI	CCNNGG	2 cut(s)	244, 513
BseGI	GGATG	1 cut(s)	10
BseLI	CCNNNNNNNGG	4 cut(s)	346, 473, 518, 519
BseNI	ACTGG	1 cut(s)	621
BseXI	GCAGC	3 cut(s)	357, 467, 495
BseYI	CCCAGC	2 cut(s)	293, 385
BsgI	GTGCAG	1 cut(s)	197
BshFI	GGCC	4 cut(s)	165, 187, 210, 613
BsiHKAI	GWGCWC	1 cut(s)	159
BsiSI	CCGG	1 cut(s)	273
BslI	CCNNNNNNNGG	4 cut(s)	346, 473, 518, 519
BsmAI	GTCTC	1 cut(s)	77
BsnI	GGCC	4 cut(s)	165, 187, 210, 613
Bsp1286I	GDGCHC	1 cut(s)	159
Bsp143I	GATC	1 cut(s)	535
BspACI	CCGC	1 cut(s)	152
BspANI	GGCC	4 cut(s)	165, 187, 210, 613
BspLI	GGNNCC	3 cut(s)	224, 465, 621
BspMAI	CTGCAG	1 cut(s)	485
BspOI	GCTAGC	1 cut(s)	579
BspPI	GGATC	1 cut(s)	543
BsrI	ACTGG	1 cut(s)	621
BssECI	CCNNGG	2 cut(s)	244, 513
BssMI	GATC	1 cut(s)	535
BssT1I	CCWWGG	1 cut(s)	244
Bst4CI	ACNGT	1 cut(s)	454
BstAPI	GCANNNNNTGC	1 cut(s)	370
BstC8I	GCNNGC	3 cut(s)	212, 563, 577
BstDSI	CCRYGG	1 cut(s)	513
BstF5I	GGATG	1 cut(s)	10
BstHHI	GCGC	2 cut(s)	285, 293
BstKTI	GATC	1 cut(s)	538
BstMAI	GTCTC	1 cut(s)	77
BstMBI	GATC	1 cut(s)	535
BstMWI	GCNNNNNNNGC	1 cut(s)	370
BstNSI	RCATGY	1 cut(s)	547
BstSCI	CCNGG	1 cut(s)	271
BstSFI	CTRYAG	2 cut(s)	378, 481
BstV1I	GCAGC	3 cut(s)	357, 467, 495
BstX2I	RGATCY	1 cut(s)	535
BstYI	RGATCY	1 cut(s)	535
BsuRI	GGCC	4 cut(s)	165, 187, 210, 613
BtgI	CCRYGG	1 cut(s)	513
BtsCI	GGATG	1 cut(s)	10
BtsIMutI	CAGTG	1 cut(s)	614
Cac8I	GCNNGC	3 cut(s)	212, 563, 577
CaiI	CAGNNNCTG	1 cut(s)	370
CfoI	GCGC	2 cut(s)	285, 293
Cfr13I	GGNCC	3 cut(s)	164, 357, 611
CviAII	CATG	2 cut(s)	544, 571
DpnI	GATC	1 cut(s)	537
DpnII	GATC	1 cut(s)	535
Ecl136II	GAGCTC	1 cut(s)	157
Eco130I	CCWWGG	1 cut(s)	244
Eco24I	GRGCYC	1 cut(s)	159
Eco47I	GGWCC	1 cut(s)	357
Eco53kI	GAGCTC	1 cut(s)	157
EcoICRI	GAGCTC	1 cut(s)	157
EcoT14I	CCWWGG	1 cut(s)	244
EcoT38I	GRGCYC	1 cut(s)	159
ErhI	CCWWGG	1 cut(s)	244
FaeI	CATG	2 cut(s)	547, 574
FaiI	YATR	9 cut(s)	260, 318, 380, 416, 442, 501, 545, 572, 625
FatI	CATG	2 cut(s)	543, 570
Fnu4HI	GCNGC	3 cut(s)	371, 481, 484
FriOI	GRGCYC	1 cut(s)	159
Fsp4HI	GCNGC	3 cut(s)	371, 481, 484
FspBI	CTAG	2 cut(s)	147, 576
GlaI	GCGC	2 cut(s)	284, 292
GluI	GCNGC	3 cut(s)	371, 481, 484
GsaI	CCCAGC	2 cut(s)	297, 389
HaeIII	GGCC	4 cut(s)	165, 187, 210, 613
HapII	CCGG	1 cut(s)	273
HhaI	GCGC	2 cut(s)	285, 293
Hin1II	CATG	2 cut(s)	547, 574
Hin6I	GCGC	2 cut(s)	283, 291
HinP1I	GCGC	2 cut(s)	283, 291
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HinfI	GANTC	1 cut(s)	304
HpaII	CCGG	1 cut(s)	273
HphI	GGTGA	1 cut(s)	361
Hpy166II	GTNNAC	1 cut(s)	313
Hpy188III	TCNNGA	2 cut(s)	301, 539
Hpy8I	GTNNAC	1 cut(s)	313
HpyAV	CCTTC	4 cut(s)	131, 248, 340, 467
HpyCH4III	ACNGT	1 cut(s)	454
HpyCH4V	TGCA	6 cut(s)	18, 100, 214, 457, 483, 565
HpyF10VI	GCNNNNNNNGC	1 cut(s)	370
Hsp92II	CATG	2 cut(s)	547, 574
HspAI	GCGC	2 cut(s)	283, 291
Kzo9I	GATC	1 cut(s)	535
LmnI	GCTCC	1 cut(s)	154
Lsp1109I	GCAGC	3 cut(s)	357, 467, 495
LweI	GCATC	1 cut(s)	495
MaeI	CTAG	2 cut(s)	147, 576
MalI	GATC	1 cut(s)	537
MboI	GATC	1 cut(s)	535
MfeI	CAATTG	1 cut(s)	125
MflI	RGATCY	1 cut(s)	535
MhlI	GDGCHC	1 cut(s)	159
MluCI	AATT	2 cut(s)	125, 352
MlyI	GAGTC	1 cut(s)	298
MmeI	TCCRAC	1 cut(s)	622
MnlI	CCTC	5 cut(s)	190, 198, 511, 526, 601
MspI	CCGG	1 cut(s)	273
MspR9I	CCNGG	1 cut(s)	273
MunI	CAATTG	1 cut(s)	125
MwoI	GCNNNNNNNGC	1 cut(s)	370
NciI	CCSGG	1 cut(s)	273
NdeII	GATC	1 cut(s)	535
NheI	GCTAGC	1 cut(s)	575
NlaIII	CATG	2 cut(s)	547, 574
NlaIV	GGNNCC	3 cut(s)	224, 465, 621
NspI	RCATGY	1 cut(s)	547
PciI	ACATGT	1 cut(s)	543
PkrI	GCNGC	3 cut(s)	372, 482, 485
PleI	GAGTC	1 cut(s)	298
PpsI	GAGTC	1 cut(s)	298
PscI	ACATGT	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	159
PspFI	CCCAGC	2 cut(s)	293, 385
PspN4I	GGNNCC	3 cut(s)	224, 465, 621
PspPI	GGNCC	3 cut(s)	164, 357, 611
PstI	CTGCAG	1 cut(s)	485
PstNI	CAGNNNCTG	1 cut(s)	370
PsuI	RGATCY	1 cut(s)	535
SacI	GAGCTC	1 cut(s)	159
SatI	GCNGC	3 cut(s)	371, 481, 484
Sau3AI	GATC	1 cut(s)	535
Sau96I	GGNCC	3 cut(s)	164, 357, 611
SchI	GAGTC	1 cut(s)	298
ScrFI	CCNGG	1 cut(s)	273
SduI	GDGCHC	1 cut(s)	159
SetI	ASST	6 cut(s)	59, 159, 351, 372, 407, 478
SfaNI	GCATC	1 cut(s)	495
SfcI	CTRYAG	2 cut(s)	378, 481
SinI	GGWCC	1 cut(s)	357
Sse9I	AATT	2 cut(s)	125, 352
SsiI	CCGC	1 cut(s)	152
SspMI	CTAG	2 cut(s)	147, 576
SstI	GAGCTC	1 cut(s)	159
StyD4I	CCNGG	1 cut(s)	271
StyI	CCWWGG	1 cut(s)	244
TaaI	ACNGT	1 cut(s)	454
TasI	AATT	2 cut(s)	125, 352
TscAI	CASTG	1 cut(s)	621
TseI	GCWGC	3 cut(s)	370, 480, 483
TspDTI	ATGAA	2 cut(s)	37, 516
TspRI	CASTG	1 cut(s)	621
VpaK11BI	GGWCC	1 cut(s)	357
XceI	RCATGY	1 cut(s)	547
XcmI	CCANNNNNNNNNTGG	1 cut(s)	605
XspI	CTAG	2 cut(s)	147, 576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.