Polyketide cyclase / dehydrase and lipid transport
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25770 AT2G25770 |
| fragaria_vesca | FvH4_1g05920 |
| malus_domestica | MD02G1061100.v1.1 MD02G1061300.v1.1 MD02G1064000.v1.1 MD08G1112000.v1.1 MD08G1112100.v1.1 |
| prunus_persica | Prupe.7G221700_v2.0.a1 |
| pyrus_communis | pycom08g09310 pycom15g17420 |
| rosa_chinensis | RchiOBHm_Chr2g0091561 RchiOBHm_Chr2g0091641 |
| rosa_laevigata | RLG00000016237 RLG00000016238 |
| rosa_multiflora | Rmu_sc0000897.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00149890 Rroxscaffold_2G00149910 |
| rosa_rugosa | Rorug02G0018700 |
| rosa_samantha | Rh2AG064000 Rh2AG064100 Rh2BG063400 Rh2CG065100 Rh2DG063500 |
| rosa_wichuraiana | Rw2G005630 Rw2G005640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 386 |
| AccB1I | GGYRCC | 1 cut(s) | 424 |
| AccI | GTMKAC | 1 cut(s) | 378 |
| AccII | CGCG | 1 cut(s) | 768 |
| AclWI | GGATC | 1 cut(s) | 504 |
| AcuI | CTGAAG | 1 cut(s) | 512 |
| AfaI | GTAC | 3 cut(s) | 222, 404, 884 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 224, 479, 704, 959 |
| AflIII | ACRYGT | 1 cut(s) | 504 |
| AgsI | TTSAA | 4 cut(s) | 31, 271, 397, 877 |
| AjiI | CACGTC | 1 cut(s) | 505 |
| AjnI | CCWGG | 3 cut(s) | 241, 721, 997 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1020, 1052 |
| AlwI | GGATC | 1 cut(s) | 504 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 814 |
| AoxI | GGCC | 7 cut(s) | 7, 133, 155, 178, 635, 658, 994 |
| ApeKI | GCWGC | 5 cut(s) | 718, 726, 805, 808, 924 |
| AspLEI | GCGC | 4 cut(s) | 255, 263, 735, 743 |
| AspS9I | GGNCC | 3 cut(s) | 134, 614, 995 |
| AsuC2I | CCSGG | 1 cut(s) | 715 |
| AsuNHI | GCTAGC | 2 cut(s) | 551, 1031 |
| AvaII | GGWCC | 1 cut(s) | 614 |
| BanI | GGYRCC | 1 cut(s) | 424 |
| BbvI | GCAGC | 5 cut(s) | 713, 730, 817, 820, 936 |
| BccI | CCATC | 3 cut(s) | 431, 854, 911 |
| BciT130I | CCWGG | 3 cut(s) | 243, 723, 999 |
| BciVI | GTATCC | 2 cut(s) | 241, 721 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BcnI | CCSGG | 1 cut(s) | 715 |
| BfaI | CTAG | 4 cut(s) | 117, 552, 782, 1032 |
| BfmI | CTRYAG | 2 cut(s) | 600, 841 |
| BfuI | GTATCC | 2 cut(s) | 241, 721 |
| BisI | GCNGC | 5 cut(s) | 719, 727, 806, 809, 925 |
| BlsI | GCNGC | 5 cut(s) | 720, 728, 807, 810, 926 |
| Bme1390I | CCNGG | 4 cut(s) | 243, 715, 723, 999 |
| Bme18I | GGWCC | 1 cut(s) | 614 |
| BmgBI | CACGTC | 1 cut(s) | 505 |
| BmgT120I | GGNCC | 3 cut(s) | 134, 614, 995 |
| BmiI | GGNNCC | 4 cut(s) | 63, 194, 426, 674 |
| BmrFI | CCNGG | 4 cut(s) | 243, 715, 723, 999 |
| BmsI | GCATC | 3 cut(s) | 316, 431, 453 |
| BmtI | GCTAGC | 2 cut(s) | 555, 1035 |
| BpmI | CTGGAG | 1 cut(s) | 665 |
| BpuMI | CCSGG | 1 cut(s) | 715 |
| BsaJI | CCNNGG | 4 cut(s) | 242, 909, 997, 1036 |
| BsaWI | WCCGGW | 3 cut(s) | 233, 277, 757 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 320, 350 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 224, 479, 704, 959 |
| Bse1I | ACTGG | 4 cut(s) | 320, 473, 523, 800 |
| Bse3DI | GCAATG | 1 cut(s) | 885 |
| BseBI | CCWGG | 3 cut(s) | 243, 723, 999 |
| BseDI | CCNNGG | 4 cut(s) | 242, 909, 997, 1036 |
| BseGI | GGATG | 1 cut(s) | 446 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 224, 479, 704, 959 |
| BseMI | GCAATG | 1 cut(s) | 885 |
| BseNI | ACTGG | 4 cut(s) | 320, 473, 523, 800 |
| BseXI | GCAGC | 5 cut(s) | 713, 730, 817, 820, 936 |
| BsgI | GTGCAG | 1 cut(s) | 943 |
| Bsh1236I | CGCG | 1 cut(s) | 768 |
| BshFI | GGCC | 7 cut(s) | 9, 135, 157, 180, 637, 660, 996 |
| BshNI | GGYRCC | 1 cut(s) | 424 |
| BsiSI | CCGG | 7 cut(s) | 234, 264, 278, 302, 714, 744, 758 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 224, 479, 704, 959 |
| BsnI | GGCC | 7 cut(s) | 9, 135, 157, 180, 637, 660, 996 |
| Bsp1407I | TGTACA | 1 cut(s) | 220 |
| Bsp143I | GATC | 3 cut(s) | 283, 496, 763 |
| Bsp68I | TCGCGA | 1 cut(s) | 768 |
| BspANI | GGCC | 7 cut(s) | 9, 135, 157, 180, 637, 660, 996 |
| BspFNI | CGCG | 1 cut(s) | 768 |
| BspHI | TCATGA | 2 cut(s) | 82, 286 |
| BspLI | GGNNCC | 4 cut(s) | 63, 194, 426, 674 |
| BspMAI | CTGCAG | 1 cut(s) | 604 |
| BspOI | GCTAGC | 2 cut(s) | 555, 1035 |
| BspPI | GGATC | 1 cut(s) | 504 |
| BspT107I | GGYRCC | 1 cut(s) | 424 |
| BsrDI | GCAATG | 1 cut(s) | 885 |
| BsrGI | TGTACA | 1 cut(s) | 220 |
| BsrI | ACTGG | 4 cut(s) | 320, 473, 523, 800 |
| BssECI | CCNNGG | 4 cut(s) | 242, 909, 997, 1036 |
| BssMI | GATC | 3 cut(s) | 283, 496, 763 |
| BssT1I | CCWWGG | 2 cut(s) | 909, 1036 |
| Bst2UI | CCWGG | 3 cut(s) | 243, 723, 999 |
| Bst4CI | ACNGT | 3 cut(s) | 336, 415, 816 |
| Bst6I | CTCTTC | 1 cut(s) | 12 |
| BstAUI | TGTACA | 1 cut(s) | 220 |
| BstC8I | GCNNGC | 7 cut(s) | 251, 353, 538, 553, 731, 833, 1033 |
| BstDEI | CTNAG | 3 cut(s) | 13, 321, 801 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 222, 702 |
| BstF5I | GGATG | 1 cut(s) | 446 |
| BstFNI | CGCG | 1 cut(s) | 768 |
| BstHHI | GCGC | 4 cut(s) | 255, 263, 735, 743 |
| BstKTI | GATC | 3 cut(s) | 286, 499, 766 |
| BstMBI | GATC | 3 cut(s) | 283, 496, 763 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 424, 732 |
| BstNI | CCWGG | 3 cut(s) | 243, 723, 999 |
| BstNSI | RCATGY | 2 cut(s) | 791, 988 |
| BstSCI | CCNGG | 4 cut(s) | 241, 713, 721, 997 |
| BstSFI | CTRYAG | 2 cut(s) | 600, 841 |
| BstUI | CGCG | 1 cut(s) | 768 |
| BstV1I | GCAGC | 5 cut(s) | 713, 730, 817, 820, 936 |
| BstX2I | RGATCY | 1 cut(s) | 496 |
| BstYI | RGATCY | 1 cut(s) | 496 |
| BsuI | GTATCC | 2 cut(s) | 241, 721 |
| BsuRI | GGCC | 7 cut(s) | 9, 135, 157, 180, 637, 660, 996 |
| BtrI | CACGTC | 1 cut(s) | 505 |
| BtsCI | GGATG | 1 cut(s) | 446 |
| BtsIMutI | CAGTG | 4 cut(s) | 480, 488, 516, 968 |
| BtuMI | TCGCGA | 1 cut(s) | 768 |
| Cac8I | GCNNGC | 7 cut(s) | 251, 353, 538, 553, 731, 833, 1033 |
| CaiI | CAGNNNCTG | 1 cut(s) | 814 |
| CciI | TCATGA | 2 cut(s) | 82, 286 |
| CfoI | GCGC | 4 cut(s) | 255, 263, 735, 743 |
| Cfr13I | GGNCC | 3 cut(s) | 134, 614, 995 |
| Csp6I | GTAC | 3 cut(s) | 221, 403, 883 |
| CviAII | CATG | 5 cut(s) | 83, 287, 532, 788, 985 |
| CviQI | GTAC | 3 cut(s) | 221, 403, 883 |
| DdeI | CTNAG | 3 cut(s) | 13, 321, 801 |
| DpnI | GATC | 3 cut(s) | 285, 498, 765 |
| DpnII | GATC | 3 cut(s) | 283, 496, 763 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 386 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 386 |
| Eam1104I | CTCTTC | 1 cut(s) | 12 |
| EarI | CTCTTC | 1 cut(s) | 12 |
| Eco130I | CCWWGG | 2 cut(s) | 909, 1036 |
| Eco32I | GATATC | 1 cut(s) | 24 |
| Eco47I | GGWCC | 1 cut(s) | 614 |
| Eco57I | CTGAAG | 1 cut(s) | 512 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 222, 702 |
| EcoO109I | RGGNCCY | 1 cut(s) | 134 |
| EcoRII | CCWGG | 3 cut(s) | 241, 721, 997 |
| EcoRV | GATATC | 1 cut(s) | 24 |
| EcoT14I | CCWWGG | 2 cut(s) | 909, 1036 |
| EcoT22I | ATGCAT | 1 cut(s) | 446 |
| ErhI | CCWWGG | 2 cut(s) | 909, 1036 |
| FaeI | CATG | 5 cut(s) | 86, 290, 535, 791, 988 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 27, 59, 1020, 1052 |
| FatI | CATG | 5 cut(s) | 82, 286, 531, 787, 984 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| FblI | GTMKAC | 1 cut(s) | 378 |
| Fnu4HI | GCNGC | 5 cut(s) | 719, 727, 806, 809, 925 |
| FokI | GGATG | 1 cut(s) | 453 |
| Fsp4HI | GCNGC | 5 cut(s) | 719, 727, 806, 809, 925 |
| FspBI | CTAG | 4 cut(s) | 117, 552, 782, 1032 |
| GlaI | GCGC | 4 cut(s) | 254, 262, 734, 742 |
| GluI | GCNGC | 5 cut(s) | 719, 727, 806, 809, 925 |
| GsuI | CTGGAG | 1 cut(s) | 665 |
| HaeIII | GGCC | 7 cut(s) | 9, 135, 157, 180, 637, 660, 996 |
| HapII | CCGG | 7 cut(s) | 234, 264, 278, 302, 714, 744, 758 |
| HhaI | GCGC | 4 cut(s) | 255, 263, 735, 743 |
| Hin1II | CATG | 5 cut(s) | 86, 290, 535, 791, 988 |
| Hin6I | GCGC | 4 cut(s) | 253, 261, 733, 741 |
| HinP1I | GCGC | 4 cut(s) | 253, 261, 733, 741 |
| HincII | GTYRAC | 1 cut(s) | 239 |
| HindII | GTYRAC | 1 cut(s) | 239 |
| HindIII | AAGCTT | 1 cut(s) | 36 |
| HinfI | GANTC | 3 cut(s) | 267, 754, 976 |
| HpaII | CCGG | 7 cut(s) | 234, 264, 278, 302, 714, 744, 758 |
| Hpy166II | GTNNAC | 5 cut(s) | 239, 379, 486, 793, 966 |
| Hpy188I | TCNGA | 1 cut(s) | 312 |
| Hpy188III | TCNNGA | 5 cut(s) | 83, 287, 500, 767, 980 |
| Hpy8I | GTNNAC | 5 cut(s) | 239, 379, 486, 793, 966 |
| Hpy99I | CGWCG | 1 cut(s) | 779 |
| HpyAV | CCTTC | 6 cut(s) | 101, 224, 424, 487, 581, 704 |
| HpyCH4III | ACNGT | 3 cut(s) | 336, 415, 816 |
| HpyCH4IV | ACGT | 2 cut(s) | 359, 504 |
| HpyCH4V | TGCA | 7 cut(s) | 444, 526, 602, 703, 890, 924, 1006 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 424, 732 |
| HpyF3I | CTNAG | 3 cut(s) | 13, 321, 801 |
| HpySE526I | ACGT | 2 cut(s) | 359, 504 |
| Hsp92II | CATG | 5 cut(s) | 86, 290, 535, 791, 988 |
| HspAI | GCGC | 4 cut(s) | 253, 261, 733, 741 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| Kzo9I | GATC | 3 cut(s) | 283, 496, 763 |
| LmnI | GCTCC | 2 cut(s) | 304, 328 |
| Lsp1109I | GCAGC | 5 cut(s) | 713, 730, 817, 820, 936 |
| LweI | GCATC | 3 cut(s) | 316, 431, 453 |
| MaeI | CTAG | 4 cut(s) | 117, 552, 782, 1032 |
| MaeII | ACGT | 2 cut(s) | 359, 504 |
| MalI | GATC | 3 cut(s) | 285, 498, 765 |
| MboI | GATC | 3 cut(s) | 283, 496, 763 |
| MboII | GAAGA | 5 cut(s) | 29, 166, 446, 646, 926 |
| MfeI | CAATTG | 1 cut(s) | 954 |
| MflI | RGATCY | 1 cut(s) | 496 |
| MluCI | AATT | 2 cut(s) | 747, 954 |
| MlyI | GAGTC | 1 cut(s) | 748 |
| MmeI | TCCRAC | 2 cut(s) | 144, 592 |
| Mph1103I | ATGCAT | 1 cut(s) | 446 |
| MseI | TTAA | 1 cut(s) | 750 |
| MslI | CAYNNNNRTG | 1 cut(s) | 899 |
| MspA1I | CMGCKG | 2 cut(s) | 355, 835 |
| MspI | CCGG | 7 cut(s) | 234, 264, 278, 302, 714, 744, 758 |
| MspR9I | CCNGG | 4 cut(s) | 243, 715, 723, 999 |
| MunI | CAATTG | 1 cut(s) | 954 |
| MvaI | CCWGG | 3 cut(s) | 243, 723, 999 |
| MvnI | CGCG | 1 cut(s) | 768 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 424, 732 |
| NciI | CCSGG | 1 cut(s) | 715 |
| NdeII | GATC | 3 cut(s) | 283, 496, 763 |
| NheI | GCTAGC | 2 cut(s) | 551, 1031 |
| NlaIII | CATG | 5 cut(s) | 86, 290, 535, 791, 988 |
| NlaIV | GGNNCC | 4 cut(s) | 63, 194, 426, 674 |
| NruI | TCGCGA | 1 cut(s) | 768 |
| NsiI | ATGCAT | 1 cut(s) | 446 |
| NspI | RCATGY | 2 cut(s) | 791, 988 |
| PagI | TCATGA | 2 cut(s) | 82, 286 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 407 |
| PfeI | GAWTC | 2 cut(s) | 267, 976 |
| PkrI | GCNGC | 5 cut(s) | 720, 728, 807, 810, 926 |
| PleI | GAGTC | 1 cut(s) | 748 |
| PpsI | GAGTC | 1 cut(s) | 748 |
| Psp6I | CCWGG | 3 cut(s) | 241, 721, 997 |
| PspGI | CCWGG | 3 cut(s) | 241, 721, 997 |
| PspN4I | GGNNCC | 4 cut(s) | 63, 194, 426, 674 |
| PspPI | GGNCC | 3 cut(s) | 134, 614, 995 |
| PstI | CTGCAG | 1 cut(s) | 604 |
| PstNI | CAGNNNCTG | 1 cut(s) | 814 |
| PsuI | RGATCY | 1 cut(s) | 496 |
| PvuII | CAGCTG | 2 cut(s) | 355, 835 |
| RruI | TCGCGA | 1 cut(s) | 768 |
| RsaI | GTAC | 3 cut(s) | 222, 404, 884 |
| RsaNI | GTAC | 3 cut(s) | 221, 403, 883 |
| RseI | CAYNNNNRTG | 1 cut(s) | 899 |
| SaqAI | TTAA | 1 cut(s) | 750 |
| SatI | GCNGC | 5 cut(s) | 719, 727, 806, 809, 925 |
| Sau3AI | GATC | 3 cut(s) | 283, 496, 763 |
| Sau96I | GGNCC | 3 cut(s) | 134, 614, 995 |
| SchI | GAGTC | 1 cut(s) | 748 |
| ScrFI | CCNGG | 4 cut(s) | 243, 715, 723, 999 |
| SfaNI | GCATC | 3 cut(s) | 316, 431, 453 |
| SfcI | CTRYAG | 2 cut(s) | 600, 841 |
| SinI | GGWCC | 1 cut(s) | 614 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 899 |
| Sse9I | AATT | 2 cut(s) | 747, 954 |
| SspI | AATATT | 1 cut(s) | 868 |
| SspMI | CTAG | 4 cut(s) | 117, 552, 782, 1032 |
| StyD4I | CCNGG | 4 cut(s) | 241, 713, 721, 997 |
| StyI | CCWWGG | 2 cut(s) | 909, 1036 |
| TaaI | ACNGT | 3 cut(s) | 336, 415, 816 |
| TaiI | ACGT | 2 cut(s) | 362, 507 |
| TaqI | TCGA | 1 cut(s) | 410 |
| TasI | AATT | 2 cut(s) | 747, 954 |
| TatI | WGTACW | 1 cut(s) | 220 |
| TfiI | GAWTC | 2 cut(s) | 267, 976 |
| Tru1I | TTAA | 1 cut(s) | 750 |
| Tru9I | TTAA | 1 cut(s) | 750 |
| TscAI | CASTG | 4 cut(s) | 480, 495, 523, 975 |
| TseI | GCWGC | 5 cut(s) | 718, 726, 805, 808, 924 |
| TspDTI | ATGAA | 2 cut(s) | 303, 989 |
| TspRI | CASTG | 4 cut(s) | 480, 495, 523, 975 |
| VpaK11BI | GGWCC | 1 cut(s) | 614 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 222, 702 |
| XceI | RCATGY | 2 cut(s) | 791, 988 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 480, 960 |
| XmiI | GTMKAC | 1 cut(s) | 378 |
| XspI | CTAG | 4 cut(s) | 117, 552, 782, 1032 |
| Zsp2I | ATGCAT | 1 cut(s) | 446 |