proteinaceous RNase P 1, chloroplastic mitochondrial-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G29010 |
| fragaria_vesca | FvH4_1g04350 FvH4_1g04370 |
| malus_domestica | MD02G1043200.v1.1 MD02G1043300.v1.1 MD02G1043500.v1.1 MD15G1181900.v1.1 |
| prunus_persica | Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233700_v2.0.a1 Prupe.7G233700_v2.0.a1 Prupe.7G233700_v2.0.a1 |
| pyrus_communis | pycom02g03600 pycom02g03620 pycom15g16410 |
| rosa_chinensis | RchiOBHm_Chr2g0090001 RchiOBHm_Chr2g0090021 |
| rosa_laevigata | RLG00000016068 RLG00000016069 RLG00000016072 RLG00000016076 |
| rosa_multiflora | Rmu_sc0000226.1_g000018 Rmu_sc0024500.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00151470 |
| rosa_rugosa | Rorug02G0004600 Rorug02G0004600 Rorug02G0004700 |
| rosa_samantha | Rh2AG049800 Rh2AG049900 Rh2BG048500 Rh2BG048700 Rh2CG050700 Rh2CG050900 Rh2DG050000 Rh2DG050100 Rh5DG028300 |
| rosa_wichuraiana | Rw2G004050 Rw2G004070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1355 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 266 |
| AccI | GTMKAC | 1 cut(s) | 1478 |
| AciI | CCGC | 3 cut(s) | 500, 720, 979 |
| AclWI | GGATC | 3 cut(s) | 1541, 1554, 1697 |
| AcoI | YGGCCR | 2 cut(s) | 1686, 1928 |
| AcsI | RAATTY | 9 cut(s) | 92, 617, 790, 973, 1068, 1765, 1781, 1862, 2495 |
| AcuI | CTGAAG | 3 cut(s) | 381, 906, 2397 |
| AfaI | GTAC | 8 cut(s) | 68, 230, 271, 662, 675, 919, 1639, 2063 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 266, 1009, 1010, 1107, 1108, 1876 |
| AflIII | ACRYGT | 1 cut(s) | 1341 |
| AgeI | ACCGGT | 1 cut(s) | 2432 |
| AjiI | CACGTC | 1 cut(s) | 2345 |
| AjnI | CCWGG | 3 cut(s) | 259, 400, 782 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 291, 323, 1121, 1153, 1328, 1360 |
| AluBI | AGCT | 9 cut(s) | 701, 1520, 1652, 1748, 1773, 1835, 1912, 2078, 2423 |
| AluI | AGCT | 9 cut(s) | 701, 1520, 1652, 1748, 1773, 1835, 1912, 2078, 2423 |
| Alw21I | GWGCWC | 1 cut(s) | 587 |
| Alw26I | GTCTC | 3 cut(s) | 1203, 1474, 2115 |
| AlwI | GGATC | 3 cut(s) | 1541, 1554, 1697 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 266 |
| AoxI | GGCC | 5 cut(s) | 3, 1383, 1686, 1843, 1928 |
| ApeKI | GCWGC | 6 cut(s) | 28, 698, 1163, 1438, 1520, 2075 |
| ApoI | RAATTY | 9 cut(s) | 92, 617, 790, 973, 1068, 1765, 1781, 1862, 2495 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1202, 1234 |
| AsiGI | ACCGGT | 1 cut(s) | 2432 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1862 |
| AspLEI | GCGC | 1 cut(s) | 550 |
| AspS9I | GGNCC | 6 cut(s) | 1277, 1348, 1384, 1808, 2207, 2529 |
| AsuHPI | GGTGA | 7 cut(s) | 515, 799, 1214, 1240, 1430, 1464, 2113 |
| AvaII | GGWCC | 5 cut(s) | 1277, 1348, 1808, 2207, 2529 |
| BaeGI | GKGCMC | 1 cut(s) | 2268 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 665, 698, 1939, 1972 |
| BalI | TGGCCA | 2 cut(s) | 1688, 1930 |
| BamHI | GGATCC | 1 cut(s) | 1546 |
| BauI | CACGAG | 1 cut(s) | 2490 |
| Bbv12I | GWGCWC | 1 cut(s) | 587 |
| BbvI | GCAGC | 6 cut(s) | 40, 710, 1175, 1425, 1507, 2087 |
| BciT130I | CCWGG | 3 cut(s) | 261, 402, 784 |
| BciVI | GTATCC | 1 cut(s) | 745 |
| BcoDI | GTCTC | 3 cut(s) | 1203, 1474, 2115 |
| BfaI | CTAG | 5 cut(s) | 441, 1182, 1260, 1379, 1796 |
| BfmI | CTRYAG | 5 cut(s) | 26, 696, 1707, 1743, 2574 |
| BfuI | GTATCC | 1 cut(s) | 745 |
| BglII | AGATCT | 1 cut(s) | 1119 |
| BisI | GCNGC | 6 cut(s) | 29, 699, 1164, 1439, 1521, 2076 |
| BlsI | GCNGC | 6 cut(s) | 30, 700, 1165, 1440, 1522, 2077 |
| Bme1390I | CCNGG | 3 cut(s) | 261, 402, 784 |
| Bme18I | GGWCC | 5 cut(s) | 1277, 1348, 1808, 2207, 2529 |
| BmgBI | CACGTC | 1 cut(s) | 2345 |
| BmgT120I | GGNCC | 6 cut(s) | 1277, 1348, 1384, 1808, 2207, 2529 |
| BmiI | GGNNCC | 2 cut(s) | 1548, 2530 |
| BmrFI | CCNGG | 3 cut(s) | 261, 402, 784 |
| BmsI | GCATC | 6 cut(s) | 535, 1748, 2011, 2185, 2191, 2371 |
| BsaAI | YACGTR | 1 cut(s) | 228 |
| BsaI | GGTCTC | 2 cut(s) | 1474, 2115 |
| BsaJI | CCNNGG | 6 cut(s) | 260, 756, 783, 795, 1351, 1875 |
| BsaWI | WCCGGW | 1 cut(s) | 2432 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 32, 62, 1824, 1854 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 266, 1009, 1010, 1107, 1108, 1876 |
| Bse118I | RCCGGY | 1 cut(s) | 2432 |
| Bse1I | ACTGG | 7 cut(s) | 179, 271, 867, 2069, 2210, 2273, 2279 |
| Bse3DI | GCAATG | 1 cut(s) | 1197 |
| BseBI | CCWGG | 3 cut(s) | 261, 402, 784 |
| BseDI | CCNNGG | 6 cut(s) | 260, 756, 783, 795, 1351, 1875 |
| BseGI | GGATG | 8 cut(s) | 604, 826, 919, 1834, 1866, 1871, 1981, 2597 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 266, 1009, 1010, 1107, 1108, 1876 |
| BseMI | GCAATG | 1 cut(s) | 1197 |
| BseMII | CTCAG | 3 cut(s) | 264, 846, 2553 |
| BseNI | ACTGG | 7 cut(s) | 179, 271, 867, 2069, 2210, 2273, 2279 |
| BseRI | GAGGAG | 3 cut(s) | 35, 362, 2217 |
| BseSI | GKGCMC | 1 cut(s) | 2268 |
| BseXI | GCAGC | 6 cut(s) | 40, 710, 1175, 1425, 1507, 2087 |
| BsgI | GTGCAG | 1 cut(s) | 1424 |
| BshFI | GGCC | 5 cut(s) | 5, 1385, 1688, 1845, 1930 |
| BshTI | ACCGGT | 1 cut(s) | 2432 |
| BsiHKAI | GWGCWC | 1 cut(s) | 587 |
| BsiSI | CCGG | 1 cut(s) | 2433 |
| BslFI | GGGAC | 4 cut(s) | 277, 434, 702, 1133 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 266, 1009, 1010, 1107, 1108, 1876 |
| BsmAI | GTCTC | 3 cut(s) | 1203, 1474, 2115 |
| BsmFI | GGGAC | 4 cut(s) | 277, 434, 702, 1133 |
| BsmI | GAATGC | 2 cut(s) | 433, 2416 |
| BsnI | GGCC | 5 cut(s) | 5, 1385, 1688, 1845, 1930 |
| Bso31I | GGTCTC | 2 cut(s) | 1474, 2115 |
| Bsp1286I | GDGCHC | 2 cut(s) | 587, 2268 |
| Bsp143I | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| Bsp19I | CCATGG | 2 cut(s) | 795, 1351 |
| BspACI | CCGC | 3 cut(s) | 500, 720, 979 |
| BspANI | GGCC | 5 cut(s) | 5, 1385, 1688, 1845, 1930 |
| BspCNI | CTCAG | 3 cut(s) | 265, 847, 2552 |
| BspLI | GGNNCC | 2 cut(s) | 1548, 2530 |
| BspMAI | CTGCAG | 3 cut(s) | 30, 700, 2578 |
| BspPI | GGATC | 3 cut(s) | 1541, 1554, 1697 |
| BspQI | GCTCTTC | 1 cut(s) | 1362 |
| BspTNI | GGTCTC | 2 cut(s) | 1474, 2115 |
| BsrDI | GCAATG | 1 cut(s) | 1197 |
| BsrFI | RCCGGY | 1 cut(s) | 2432 |
| BsrI | ACTGG | 7 cut(s) | 179, 271, 867, 2069, 2210, 2273, 2279 |
| BssAI | RCCGGY | 1 cut(s) | 2432 |
| BssECI | CCNNGG | 6 cut(s) | 260, 756, 783, 795, 1351, 1875 |
| BssMI | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| BssSI | CACGAG | 1 cut(s) | 2490 |
| BssT1I | CCWWGG | 4 cut(s) | 756, 795, 1351, 1875 |
| Bst2BI | CACGAG | 1 cut(s) | 2490 |
| Bst2UI | CCWGG | 3 cut(s) | 261, 402, 784 |
| Bst4CI | ACNGT | 4 cut(s) | 233, 673, 678, 1476 |
| Bst6I | CTCTTC | 3 cut(s) | 13, 501, 1362 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1289, 2182 |
| BstBAI | YACGTR | 1 cut(s) | 228 |
| BstC8I | GCNNGC | 2 cut(s) | 772, 1592 |
| BstDEI | CTNAG | 7 cut(s) | 273, 528, 723, 855, 985, 1448, 2539 |
| BstDSI | CCRYGG | 2 cut(s) | 795, 1351 |
| BstF5I | GGATG | 8 cut(s) | 604, 826, 919, 1834, 1866, 1871, 1981, 2597 |
| BstHHI | GCGC | 1 cut(s) | 550 |
| BstKTI | GATC | 5 cut(s) | 910, 1122, 1549, 1705, 2538 |
| BstMAI | GTCTC | 3 cut(s) | 1203, 1474, 2115 |
| BstMBI | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 34, 1187, 1289, 1745, 1851, 2030, 2182, 2420 |
| BstNI | CCWGG | 3 cut(s) | 261, 402, 784 |
| BstNSI | RCATGY | 2 cut(s) | 1345, 2224 |
| BstSCI | CCNGG | 3 cut(s) | 259, 400, 782 |
| BstSFI | CTRYAG | 5 cut(s) | 26, 696, 1707, 1743, 2574 |
| BstSLI | GKGCMC | 1 cut(s) | 2268 |
| BstV1I | GCAGC | 6 cut(s) | 40, 710, 1175, 1425, 1507, 2087 |
| BstX2I | RGATCY | 2 cut(s) | 1119, 1546 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 802 |
| BstYI | RGATCY | 2 cut(s) | 1119, 1546 |
| BsuI | GTATCC | 1 cut(s) | 745 |
| BsuRI | GGCC | 5 cut(s) | 5, 1385, 1688, 1845, 1930 |
| BtgI | CCRYGG | 2 cut(s) | 795, 1351 |
| BtrI | CACGTC | 1 cut(s) | 2345 |
| BtsCI | GGATG | 8 cut(s) | 604, 826, 919, 1834, 1866, 1871, 1981, 2597 |
| BtsI | GCAGTG | 2 cut(s) | 23, 1827 |
| BtsIMutI | CAGTG | 8 cut(s) | 23, 348, 852, 1084, 1827, 1966, 2217, 2266 |
| Cac8I | GCNNGC | 2 cut(s) | 772, 1592 |
| CaiI | CAGNNNCTG | 1 cut(s) | 266 |
| CfoI | GCGC | 1 cut(s) | 550 |
| Cfr10I | RCCGGY | 1 cut(s) | 2432 |
| Cfr13I | GGNCC | 6 cut(s) | 1277, 1348, 1384, 1808, 2207, 2529 |
| Csp6I | GTAC | 8 cut(s) | 67, 229, 270, 661, 674, 918, 1638, 2062 |
| CspAI | ACCGGT | 1 cut(s) | 2432 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1654, 1689 |
| CviQI | GTAC | 8 cut(s) | 67, 229, 270, 661, 674, 918, 1638, 2062 |
| DdeI | CTNAG | 7 cut(s) | 273, 528, 723, 855, 985, 1448, 2539 |
| DpnI | GATC | 5 cut(s) | 909, 1121, 1548, 1704, 2537 |
| DpnII | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| DraI | TTTAAA | 1 cut(s) | 91 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1355 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1355 |
| EaeI | YGGCCR | 2 cut(s) | 1686, 1928 |
| Eam1104I | CTCTTC | 3 cut(s) | 13, 501, 1362 |
| EarI | CTCTTC | 3 cut(s) | 13, 501, 1362 |
| Eco130I | CCWWGG | 4 cut(s) | 756, 795, 1351, 1875 |
| Eco147I | AGGCCT | 1 cut(s) | 1845 |
| Eco31I | GGTCTC | 2 cut(s) | 1474, 2115 |
| Eco47I | GGWCC | 5 cut(s) | 1277, 1348, 1808, 2207, 2529 |
| Eco57I | CTGAAG | 3 cut(s) | 381, 906, 2397 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1384 |
| EcoRI | GAATTC | 2 cut(s) | 790, 1068 |
| EcoRII | CCWGG | 3 cut(s) | 259, 400, 782 |
| EcoT14I | CCWWGG | 4 cut(s) | 756, 795, 1351, 1875 |
| EcoT22I | ATGCAT | 1 cut(s) | 2327 |
| ErhI | CCWWGG | 4 cut(s) | 756, 795, 1351, 1875 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 923, 955 |
| FaqI | GGGAC | 4 cut(s) | 277, 434, 702, 1133 |
| FauI | CCCGC | 3 cut(s) | 493, 727, 986 |
| FblI | GTMKAC | 1 cut(s) | 1478 |
| Fnu4HI | GCNGC | 6 cut(s) | 29, 699, 1164, 1439, 1521, 2076 |
| FokI | GGATG | 8 cut(s) | 611, 833, 926, 1841, 1853, 1858, 1988, 2604 |
| Fsp4HI | GCNGC | 6 cut(s) | 29, 699, 1164, 1439, 1521, 2076 |
| FspBI | CTAG | 5 cut(s) | 441, 1182, 1260, 1379, 1796 |
| GlaI | GCGC | 1 cut(s) | 549 |
| GluI | GCNGC | 6 cut(s) | 29, 699, 1164, 1439, 1521, 2076 |
| HaeIII | GGCC | 5 cut(s) | 5, 1385, 1688, 1845, 1930 |
| HapII | CCGG | 1 cut(s) | 2433 |
| HhaI | GCGC | 1 cut(s) | 550 |
| Hin6I | GCGC | 1 cut(s) | 548 |
| HinP1I | GCGC | 1 cut(s) | 548 |
| HindIII | AAGCTT | 2 cut(s) | 1771, 1910 |
| HinfI | GANTC | 8 cut(s) | 256, 761, 1022, 1407, 1730, 2252, 2360, 2441 |
| HpaII | CCGG | 1 cut(s) | 2433 |
| HphI | GGTGA | 7 cut(s) | 515, 799, 1214, 1240, 1430, 1464, 2113 |
| Hpy166II | GTNNAC | 4 cut(s) | 236, 294, 469, 1479 |
| Hpy188I | TCNGA | 6 cut(s) | 925, 1779, 2200, 2257, 2290, 2542 |
| Hpy188III | TCNNGA | 8 cut(s) | 477, 911, 1364, 2249, 2348, 2399, 2492, 2561 |
| Hpy8I | GTNNAC | 4 cut(s) | 236, 294, 469, 1479 |
| HpyAV | CCTTC | 2 cut(s) | 1926, 2255 |
| HpyCH4III | ACNGT | 4 cut(s) | 233, 673, 678, 1476 |
| HpyCH4IV | ACGT | 3 cut(s) | 227, 540, 2344 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 34, 1187, 1289, 1745, 1851, 2030, 2182, 2420 |
| HpyF3I | CTNAG | 7 cut(s) | 273, 528, 723, 855, 985, 1448, 2539 |
| HpySE526I | ACGT | 3 cut(s) | 227, 540, 2344 |
| HspAI | GCGC | 1 cut(s) | 548 |
| Kzo9I | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| LguI | GCTCTTC | 1 cut(s) | 1362 |
| LmnI | GCTCC | 3 cut(s) | 655, 1649, 1832 |
| Lsp1109I | GCAGC | 6 cut(s) | 40, 710, 1175, 1425, 1507, 2087 |
| LweI | GCATC | 6 cut(s) | 535, 1748, 2011, 2185, 2191, 2371 |
| MaeI | CTAG | 5 cut(s) | 441, 1182, 1260, 1379, 1796 |
| MaeII | ACGT | 3 cut(s) | 227, 540, 2344 |
| MaeIII | GTNAC | 5 cut(s) | 1418, 2101, 2399, 2442, 2546 |
| MalI | GATC | 5 cut(s) | 909, 1121, 1548, 1704, 2537 |
| MboI | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| MfeI | CAATTG | 3 cut(s) | 1569, 1692, 2553 |
| MflI | RGATCY | 2 cut(s) | 1119, 1546 |
| MhlI | GDGCHC | 2 cut(s) | 587, 2268 |
| MlsI | TGGCCA | 2 cut(s) | 1688, 1930 |
| MluNI | TGGCCA | 2 cut(s) | 1688, 1930 |
| MlyI | GAGTC | 3 cut(s) | 265, 1416, 2450 |
| MmeI | TCCRAC | 3 cut(s) | 42, 633, 1326 |
| Mox20I | TGGCCA | 2 cut(s) | 1688, 1930 |
| Mph1103I | ATGCAT | 1 cut(s) | 2327 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1862 |
| MscI | TGGCCA | 2 cut(s) | 1688, 1930 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2298, 2320 |
| Msp20I | TGGCCA | 2 cut(s) | 1688, 1930 |
| MspA1I | CMGCKG | 1 cut(s) | 701 |
| MspI | CCGG | 1 cut(s) | 2433 |
| MspR9I | CCNGG | 3 cut(s) | 261, 402, 784 |
| MunI | CAATTG | 3 cut(s) | 1569, 1692, 2553 |
| Mva1269I | GAATGC | 2 cut(s) | 433, 2416 |
| MvaI | CCWGG | 3 cut(s) | 261, 402, 784 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 34, 1187, 1289, 1745, 1851, 2030, 2182, 2420 |
| NcoI | CCATGG | 2 cut(s) | 795, 1351 |
| NdeII | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| NlaIV | GGNNCC | 2 cut(s) | 1548, 2530 |
| NmuCI | GTSAC | 5 cut(s) | 1418, 2101, 2399, 2442, 2546 |
| NsiI | ATGCAT | 1 cut(s) | 2327 |
| NspI | RCATGY | 2 cut(s) | 1345, 2224 |
| PceI | AGGCCT | 1 cut(s) | 1845 |
| PciI | ACATGT | 1 cut(s) | 1341 |
| PciSI | GCTCTTC | 1 cut(s) | 1362 |
| PctI | GAATGC | 2 cut(s) | 433, 2416 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1862 |
| PfeI | GAWTC | 5 cut(s) | 761, 1022, 1730, 2252, 2360 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 266 |
| PinAI | ACCGGT | 1 cut(s) | 2432 |
| PkrI | GCNGC | 6 cut(s) | 30, 700, 1165, 1440, 1522, 2077 |
| PleI | GAGTC | 3 cut(s) | 264, 1415, 2449 |
| PpsI | GAGTC | 3 cut(s) | 264, 1415, 2449 |
| Ppu21I | YACGTR | 1 cut(s) | 228 |
| PscI | ACATGT | 1 cut(s) | 1341 |
| Psp6I | CCWGG | 3 cut(s) | 259, 400, 782 |
| PspGI | CCWGG | 3 cut(s) | 259, 400, 782 |
| PspN4I | GGNNCC | 2 cut(s) | 1548, 2530 |
| PspPI | GGNCC | 6 cut(s) | 1277, 1348, 1384, 1808, 2207, 2529 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 736, 768 |
| PstI | CTGCAG | 3 cut(s) | 30, 700, 2578 |
| PstNI | CAGNNNCTG | 1 cut(s) | 266 |
| PsuI | RGATCY | 2 cut(s) | 1119, 1546 |
| PvuII | CAGCTG | 1 cut(s) | 701 |
| RsaI | GTAC | 8 cut(s) | 68, 230, 271, 662, 675, 919, 1639, 2063 |
| RsaNI | GTAC | 8 cut(s) | 67, 229, 270, 661, 674, 918, 1638, 2062 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2298, 2320 |
| SapI | GCTCTTC | 1 cut(s) | 1362 |
| SatI | GCNGC | 6 cut(s) | 29, 699, 1164, 1439, 1521, 2076 |
| Sau3AI | GATC | 5 cut(s) | 907, 1119, 1546, 1702, 2535 |
| Sau96I | GGNCC | 6 cut(s) | 1277, 1348, 1384, 1808, 2207, 2529 |
| SchI | GAGTC | 3 cut(s) | 265, 1416, 2450 |
| ScrFI | CCNGG | 3 cut(s) | 261, 402, 784 |
| SduI | GDGCHC | 2 cut(s) | 587, 2268 |
| SfaNI | GCATC | 6 cut(s) | 535, 1748, 2011, 2185, 2191, 2371 |
| SfcI | CTRYAG | 5 cut(s) | 26, 696, 1707, 1743, 2574 |
| SinI | GGWCC | 5 cut(s) | 1277, 1348, 1808, 2207, 2529 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2298, 2320 |
| SseBI | AGGCCT | 1 cut(s) | 1845 |
| SsiI | CCGC | 3 cut(s) | 500, 720, 979 |
| SspI | AATATT | 1 cut(s) | 196 |
| SspMI | CTAG | 5 cut(s) | 441, 1182, 1260, 1379, 1796 |
| StuI | AGGCCT | 1 cut(s) | 1845 |
| StyD4I | CCNGG | 3 cut(s) | 259, 400, 782 |
| StyI | CCWWGG | 4 cut(s) | 756, 795, 1351, 1875 |
| TaaI | ACNGT | 4 cut(s) | 233, 673, 678, 1476 |
| TaiI | ACGT | 3 cut(s) | 230, 543, 2347 |
| TaqI | TCGA | 2 cut(s) | 742, 2428 |
| TatI | WGTACW | 1 cut(s) | 673 |
| TfiI | GAWTC | 5 cut(s) | 761, 1022, 1730, 2252, 2360 |
| TscAI | CASTG | 8 cut(s) | 30, 348, 859, 1084, 1827, 1966, 2217, 2273 |
| TseFI | GTSAC | 5 cut(s) | 1418, 2101, 2399, 2442, 2546 |
| TseI | GCWGC | 6 cut(s) | 28, 698, 1163, 1438, 1520, 2075 |
| Tsp45I | GTSAC | 5 cut(s) | 1418, 2101, 2399, 2442, 2546 |
| TspDTI | ATGAA | 8 cut(s) | 942, 1169, 1253, 1496, 1511, 1855, 1934, 1992 |
| TspGWI | ACGGA | 2 cut(s) | 1723, 2220 |
| TspRI | CASTG | 8 cut(s) | 30, 348, 859, 1084, 1827, 1966, 2217, 2273 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 266 |
| VpaK11BI | GGWCC | 5 cut(s) | 1277, 1348, 1808, 2207, 2529 |
| XapI | RAATTY | 9 cut(s) | 92, 617, 790, 973, 1068, 1765, 1781, 1862, 2495 |
| XceI | RCATGY | 2 cut(s) | 1345, 2224 |
| XmiI | GTMKAC | 1 cut(s) | 1478 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1862 |
| XspI | CTAG | 5 cut(s) | 441, 1182, 1260, 1379, 1796 |
| Zsp2I | ATGCAT | 1 cut(s) | 2327 |