Rh2AG049900
NAC Family

proteinaceous RNase P 1, chloroplastic mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0002433
Physical Location & Seq
Forward (+)
3956366 .. 3962438
6073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG049900.1

Sequence Viewer

Length: 2559 bp
ATGGCCTCCTTCACCTCCCCCAACTCAGTACTGCAGCAAAAGCACCACCCCCCTCTTCACTCCATCACCACCCTCTGTAAGTACCCATCTCCTCTCAACGTTTTTGAATTCCACTGCCCCTCTTATTTCTTCGCTTTCTCACCTCCCAAGCAAACACTTCAACTCAAACACGCACTAAAACTCTATCCACTTCCACTAGCTAGAGAGAATATCAACCACATAGTTGCAAAGTTTTCCACCTCCACCACCACGTACCATGAACCACACACAAAGACCCTGAACTCATCAACTGAAAAACCTGTAAAGAACAATGGCAGTTCAGTTGTGGAGAAAAAGAGTGAAGCTAGGTTCACTAAAGAGAAAAGTACAAAGAAAAGTAGAAGGAAGGAGGGTATGTGGTTTAAAGATAAGAGTAAGGAAAGAAAGAAGAGAGGTAGTGATAGTGATCAAGTGGGAGAAGAGAAAAAGGGGAGAGGGTCTAAGAAAAACAAGGTTAATGTAGACTTGCCTGAAGTTAAGATGAGAGTTGGATTGGATATGTGCTCAAAGAGAGGGGATGTAATGGGTGCAATTAAGTACTATGATTTGGCTCAAACTGAGCAGATTAAGTTGGATCAGTATCATTATACTGTTCTGTTGTATCCGTGCTCTTCTGCAGCTGTTGGTGTTGTTCATCCTGCTAAGAGTGGGTCTGGGACTCGAGTTTTGGATACCCTGAATTCGTCTGGTGAAGGAACTGGGGTGGAAACAATGGAGTTGACTAAGTTAAGAGATTCGGGTATTGGGAATTGGGATGATAACAGTGGAAGTGATGAGAGTGCTGAAAAATTGGAGTTGAGTTCAAGGAACAGGTTTGATGATGATGTGGATGGTGCTTCCAATGAAAAGAGGAACTTAGCGTGGTTTTCTAATGGATTTGTGAAGCGAAACTCTCGCCTGTTAGATGGACTGAACAATCCTACCAAAGTTGGAGATGATGGTACAAGTCTAAAAGATGGAAATGTGAAGCAAGAAAGCAATGAGATTTGGGTTAGTGAGGATGTGAAGAAGTATGCACTCCAAAGGGGATTTGAGATTTATGAGAAGATGTGTTTGGATGGTGTCCCAGTGAATGAAGCAGCATTGACATCTGTGGCTAGAATGGCGATGTCAATGGGGGAGGGAGACATGGCATTTGACATGGTGAAGCAGATGAAATCGATGGGAATAAATCCTAGACTGCGTTCCTACGGTCCTGCGTTATCTGCTTTTTGCAGTAGTGGCAATATTGACAAAGCGTTTGCTGTTGAGAAACACATGTTGGAGCATGGTGTCTATCCGGAAGAGCCTGAACTGGAGGCCCTCTTAAGAGTGAGTGTGGGAGCTGGAATAGGTGACAAGGTGTATTATATGTTGCAGAAACTAAGAACAAGTGTAAGGAGGGTCTCACCCTCTACTGCTGACTTAATTGTAAAGTGGTTTAATAGCAAGGAAGCGTCGAGAGTGGGAAAGACAAAATGGGACGAAAGATTGATAAGGCAGGCCATTGAAAATGGAGGTGGTGGGTGGCATGGGCAGGGATGGTTGGGGAAAGGAAAGTGGTCAGTGCTACATACAACTATTGGATCCGATGGCTTGTGCAAATGCTGTGGGGGGAAATTGGCCACAATTGATCTTGATCCTGTAGAAACAGAAAACTTTGCTGAATCAGTTGCATCTATAGCTATACAGAGAGAGAAAAATTCAAGCTTTCAGAAATTTCAAAAATGGCTCGATTATTATGGACCTTTTGAAGCAGTGGTGGATGGAGCTAATGTAGGTCTTTTCAGCCAGAAGAAATTCATCACAGCCAAGGTCAATGCTGTCGTTAATGGCATACGCCAGAAGCTTCCTTCGAAGAGATGGCCACTCATTGTTCTTCATAATAGGCGTATCACTGGAGGCAGAATGGATGAACGGGTGAATAAGGCGTTGATTGAGAAGTGGCAAAATGCTGATGCTCTCTATGCAACGCCTACTGGGTCAAATGATGATTGGTACTGGTTGTATGCTGCAATTAAGTTCAAGTGCTTACTTGTGACAAATGATGAGATGAGAGACCATACATTTCAGCTTCTTGGGAATGATTTCTTTCCAAGATGGAAAGAAAGGCATCAAGTGCACTTCAGTTTCTCTGAAGGTGGTCCAGTGTTTCATATGCCTCCTCCTTGTTCTGTTGTAATTCAGGAATCAGAGGAAGGGCACTGGCACATTCCAGTGGTGTCAGAACATGGTTATGAAGCTGAAAGAATGTGGTTATGCATTATGCGAGCTAAATCACGTGAGGCAAGGAAGGATTCTGCAACCAGACCTGAAGAACCTCAAAACAAGGGATTTGCTAGGTCAGCTACCAGAACTGGCATTGAGTCACAACCGTTGAAAATTGCGAACCACAAATATACTAAACACCGACCCCAGGAAATTCTCAAGAATCTCAAAGATATTCTATCAGGTTCCACAATCTCGAATCATCGTTCCATAATACCAGAAATTGAGACTGCAGAGAAGATTGGTGGTTGTACCATTGACTTTCAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
PPR_long PRORP

Protein Analysis

852

Amino Acids

95.71

Weight (kDa)

9.09

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 162 - 241 1.5e-12 Pentacotripeptide-repeat region of PRORP
PPR_long PF17177 348 - 493 9.2e-52 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 374 - 485 5.2e-07 Fungal tetratrico peptide repeats
PRORP PF16953 534 - 760 1.3e-80 Protein-only RNase P
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 501
AccIII TCCGGA 1 cut(s) 1318
AclI AACGTT 1 cut(s) 99
AclWI GGATC 4 cut(s) 621, 1599, 1612, 1652
AcoI YGGCCR 2 cut(s) 1641, 1883
AcsI RAATTY 6 cut(s) 107, 718, 1720, 1736, 1817, 2439
AcuI CTGAAG 4 cut(s) 531, 2128, 2175, 2352
AcvI CACGTG 1 cut(s) 2300
AfaI GTAC 8 cut(s) 30, 83, 254, 367, 578, 982, 2018, 2539
AfiI CCNNNNNNNGG 1 cut(s) 2434
AflII CTTAAG 1 cut(s) 1345
AflIII ACRYGT 1 cut(s) 1296
AjnI CCWGG 1 cut(s) 2433
AjuI GAANNNNNNNTTGG 4 cut(s) 1076, 1108, 1283, 1315
Alw21I GWGCWC 3 cut(s) 545, 650, 2142
Alw26I GTCTC 4 cut(s) 1158, 1429, 2070, 2507
Alw44I GTGCAC 1 cut(s) 2138
AlwI GGATC 4 cut(s) 621, 1599, 1612, 1652
Ama87I CYCGRG 1 cut(s) 699
Aor13HI TCCGGA 1 cut(s) 1318
AoxI GGCC 5 cut(s) 3, 1338, 1521, 1641, 1883
ApaLI GTGCAC 1 cut(s) 2138
ApeKI GCWGC 4 cut(s) 34, 656, 1118, 2030
ApoI RAATTY 6 cut(s) 107, 718, 1720, 1736, 1817, 2439
ArsI GACNNNNNNTTYG 6 cut(s) 688, 720, 1157, 1189, 1262, 1294
Asp700I GAANNNNTTC 2 cut(s) 1817, 2105
AspS9I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
AsuHPI GGTGA 8 cut(s) 4, 58, 132, 740, 1195, 1385, 1419, 1951
AsuII TTCGAA 1 cut(s) 1874
AvaI CYCGRG 1 cut(s) 699
AvaII GGWCC 3 cut(s) 1232, 1763, 2162
BaeGI GKGCMC 2 cut(s) 2142, 2223
BalI TGGCCA 2 cut(s) 1643, 1885
BamHI GGATCC 1 cut(s) 1604
BbrPI CACGTG 1 cut(s) 2300
Bbv12I GWGCWC 3 cut(s) 545, 650, 2142
BbvI GCAGC 4 cut(s) 46, 668, 1130, 2017
BciT130I CCWGG 1 cut(s) 2435
BciVI GTATCC 2 cut(s) 651, 703
BclI TGATCA 1 cut(s) 445
BcoDI GTCTC 4 cut(s) 1158, 1429, 2070, 2507
BfaI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2358
BfmI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2517
BfrI CTTAAG 1 cut(s) 1345
BfuI GTATCC 2 cut(s) 651, 703
BisI GCNGC 4 cut(s) 35, 657, 1119, 2031
BlsI GCNGC 4 cut(s) 36, 658, 1120, 2032
BmcAI AGTACT 2 cut(s) 30, 578
Bme1390I CCNGG 1 cut(s) 2435
Bme18I GGWCC 3 cut(s) 1232, 1763, 2162
BmeT110I CYCGRG 1 cut(s) 699
BmgT120I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
BmiI GGNNCC 2 cut(s) 1606, 2473
BmrFI CCNGG 1 cut(s) 2435
BmrI ACTGGG 3 cut(s) 747, 1100, 2007
BmsI GCATC 3 cut(s) 1703, 1966, 2140
BmuI ACTGGG 3 cut(s) 747, 1100, 2007
BpmI CTGGAG 2 cut(s) 1355, 1938
Bpu14I TTCGAA 1 cut(s) 1874
BpuEI CTTGAG 1 cut(s) 2429
Bsa29I ATCGAT 1 cut(s) 1199
BsaAI YACGTR 2 cut(s) 252, 2300
BsaBI GATNNNNATC 3 cut(s) 444, 618, 1656
BsaI GGTCTC 2 cut(s) 1429, 2070
BsaJI CCNNGG 2 cut(s) 1830, 2433
BsaWI WCCGGW 1 cut(s) 1318
BsaXI ACNNNNNCTCC 4 cut(s) 380, 410, 1779, 1809
Bsc4I CCNNNNNNNGG 1 cut(s) 2434
Bse3DI GCAATG 1 cut(s) 1024
Bse8I GATNNNNATC 3 cut(s) 444, 618, 1656
BseAI TCCGGA 1 cut(s) 1318
BseBI CCWGG 1 cut(s) 2435
BseCI ATCGAT 1 cut(s) 1199
BseDI CCNNGG 2 cut(s) 1830, 2433
BseGI GGATG 9 cut(s) 562, 673, 799, 874, 1045, 1102, 1565, 1789, 1936
BseJI GATNNNNATC 3 cut(s) 444, 618, 1656
BseLI CCNNNNNNNGG 1 cut(s) 2434
BseMI GCAATG 1 cut(s) 1024
BseMII CTCAG 2 cut(s) 39, 588
BseRI GAGGAG 2 cut(s) 81, 2172
BseSI GKGCMC 2 cut(s) 2142, 2223
BseXI GCAGC 4 cut(s) 46, 668, 1130, 2017
BshFI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BshVI ATCGAT 1 cut(s) 1199
BsiHKAI GWGCWC 3 cut(s) 545, 650, 2142
BsiHKCI CYCGRG 1 cut(s) 699
BsiSI CCGG 1 cut(s) 1319
BslFI GGGAC 3 cut(s) 709, 1088, 1514
BslI CCNNNNNNNGG 1 cut(s) 2434
BsmAI GTCTC 4 cut(s) 1158, 1429, 2070, 2507
BsmFI GGGAC 3 cut(s) 709, 1088, 1514
BsnI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
Bso31I GGTCTC 2 cut(s) 1429, 2070
BsoBI CYCGRG 1 cut(s) 699
Bsp119I TTCGAA 1 cut(s) 1874
Bsp1286I GDGCHC 4 cut(s) 545, 650, 2142, 2223
Bsp13I TCCGGA 1 cut(s) 1318
Bsp143I GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BspANI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BspCNI CTCAG 2 cut(s) 38, 589
BspDI ATCGAT 1 cut(s) 1199
BspEI TCCGGA 1 cut(s) 1318
BspLI GGNNCC 2 cut(s) 1606, 2473
BspMAI CTGCAG 3 cut(s) 36, 658, 2521
BspPI GGATC 4 cut(s) 621, 1599, 1612, 1652
BspQI GCTCTTC 2 cut(s) 655, 1317
BspT104I TTCGAA 1 cut(s) 1874
BspTI CTTAAG 1 cut(s) 1345
BspTNI GGTCTC 2 cut(s) 1429, 2070
BsrDI GCAATG 1 cut(s) 1024
BssECI CCNNGG 2 cut(s) 1830, 2433
BssMI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BssT1I CCWWGG 1 cut(s) 1830
Bst2UI CCWGG 1 cut(s) 2435
Bst4CI ACNGT 4 cut(s) 631, 803, 1232, 2394
Bst6I CTCTTC 6 cut(s) 60, 422, 453, 655, 1317, 1871
BstAFI CTTAAG 1 cut(s) 1345
BstAPI GCANNNNNTGC 1 cut(s) 2137
BstBAI YACGTR 2 cut(s) 252, 2300
BstBI TTCGAA 1 cut(s) 1874
BstC8I GCNNGC 2 cut(s) 1521, 2289
BstDEI CTNAG 7 cut(s) 25, 480, 597, 681, 762, 895, 1403
BstF5I GGATG 9 cut(s) 562, 673, 799, 874, 1045, 1102, 1565, 1789, 1936
BstKTI GATC 5 cut(s) 448, 616, 1607, 1654, 1660
BstMAI GTCTC 4 cut(s) 1158, 1429, 2070, 2507
BstMBI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BstMWI GCNNNNNNNGC 8 cut(s) 40, 1142, 1244, 1260, 1700, 1985, 2137, 2363
BstNI CCWGG 1 cut(s) 2435
BstNSI RCATGY 1 cut(s) 1300
BstSCI CCNGG 1 cut(s) 2433
BstSFI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2517
BstSLI GKGCMC 2 cut(s) 2142, 2223
BstV1I GCAGC 4 cut(s) 46, 668, 1130, 2017
BstX2I RGATCY 1 cut(s) 1604
BstYI RGATCY 1 cut(s) 1604
Bsu15I ATCGAT 1 cut(s) 1199
BsuI GTATCC 2 cut(s) 651, 703
BsuRI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BsuTUI ATCGAT 1 cut(s) 1199
BtgZI GCGATG 1 cut(s) 1160
BtsCI GGATG 9 cut(s) 562, 673, 799, 874, 1045, 1102, 1565, 1789, 1936
BtsI GCAGTG 2 cut(s) 112, 1782
BtsIMutI CAGTG 9 cut(s) 112, 808, 1113, 1590, 1782, 1914, 2172, 2221, 2241
Cac8I GCNNGC 2 cut(s) 1521, 2289
Cfr13I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
ClaI ATCGAT 1 cut(s) 1199
CseI GACGC 1 cut(s) 1464
Csp6I GTAC 8 cut(s) 29, 82, 253, 366, 577, 981, 2017, 2538
CspCI CAANNNNNGTGG 2 cut(s) 1609, 1644
CviAII CATG 7 cut(s) 257, 1168, 1180, 1297, 1307, 1550, 2249
CviQI GTAC 8 cut(s) 29, 82, 253, 366, 577, 981, 2017, 2538
DdeI CTNAG 7 cut(s) 25, 480, 597, 681, 762, 895, 1403
DpnI GATC 5 cut(s) 447, 615, 1606, 1653, 1659
DpnII GATC 5 cut(s) 445, 613, 1604, 1651, 1657
DraI TTTAAA 1 cut(s) 403
EaeI YGGCCR 2 cut(s) 1641, 1883
Eam1104I CTCTTC 6 cut(s) 60, 422, 453, 655, 1317, 1871
EarI CTCTTC 6 cut(s) 60, 422, 453, 655, 1317, 1871
Eco130I CCWWGG 1 cut(s) 1830
Eco31I GGTCTC 2 cut(s) 1429, 2070
Eco47I GGWCC 3 cut(s) 1232, 1763, 2162
Eco57I CTGAAG 4 cut(s) 531, 2128, 2175, 2352
Eco72I CACGTG 1 cut(s) 2300
Eco88I CYCGRG 1 cut(s) 699
EcoO109I RGGNCCY 1 cut(s) 1339
EcoRI GAATTC 2 cut(s) 107, 718
EcoRII CCWGG 1 cut(s) 2433
EcoT14I CCWWGG 1 cut(s) 1830
EcoT22I ATGCAT 1 cut(s) 2282
ErhI CCWWGG 1 cut(s) 1830
FaeI CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FaqI GGGAC 3 cut(s) 709, 1088, 1514
FatI CATG 7 cut(s) 256, 1167, 1179, 1296, 1306, 1549, 2248
FauNDI CATATG 1 cut(s) 2175
FbaI TGATCA 1 cut(s) 445
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 4 cut(s) 35, 657, 1119, 2031
FokI GGATG 9 cut(s) 569, 660, 806, 881, 1052, 1109, 1572, 1796, 1943
Fsp4HI GCNGC 4 cut(s) 35, 657, 1119, 2031
FspBI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2358
GluI GCNGC 4 cut(s) 35, 657, 1119, 2031
GsuI CTGGAG 2 cut(s) 1355, 1938
HaeIII GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
HapII CCGG 1 cut(s) 1319
HgaI GACGC 1 cut(s) 1464
Hin1II CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
HincII GTYRAC 1 cut(s) 759
HindII GTYRAC 1 cut(s) 759
HindIII AAGCTT 2 cut(s) 1726, 1865
HinfI GANTC 8 cut(s) 697, 773, 1685, 2207, 2315, 2384, 2449, 2485
HpaII CCGG 1 cut(s) 1319
HphI GGTGA 8 cut(s) 4, 58, 132, 740, 1195, 1385, 1419, 1951
Hpy166II GTNNAC 4 cut(s) 351, 502, 759, 2140
Hpy188I TCNGA 5 cut(s) 1609, 1734, 2155, 2212, 2245
Hpy188III TCNNGA 6 cut(s) 1319, 1479, 1655, 2204, 2446, 2482
Hpy8I GTNNAC 4 cut(s) 351, 502, 759, 2140
Hpy99I CGWCG 1 cut(s) 1480
HpyAV CCTTC 8 cut(s) 19, 375, 379, 725, 1881, 2150, 2210, 2305
HpyCH4III ACNGT 4 cut(s) 631, 803, 1232, 2394
HpyCH4IV ACGT 3 cut(s) 99, 251, 2299
HpyF10VI GCNNNNNNNGC 8 cut(s) 40, 1142, 1244, 1260, 1700, 1985, 2137, 2363
HpyF3I CTNAG 7 cut(s) 25, 480, 597, 681, 762, 895, 1403
HpySE526I ACGT 3 cut(s) 99, 251, 2299
Hsp92II CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
Kpn2I TCCGGA 1 cut(s) 1318
Ksp22I TGATCA 1 cut(s) 445
Kzo9I GATC 5 cut(s) 445, 613, 1604, 1651, 1657
LguI GCTCTTC 2 cut(s) 655, 1317
LmnI GCTCC 3 cut(s) 1303, 1361, 1787
Lsp1109I GCAGC 4 cut(s) 46, 668, 1130, 2017
LweI GCATC 3 cut(s) 1703, 1966, 2140
MaeI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2358
MaeII ACGT 3 cut(s) 99, 251, 2299
MaeIII GTNAC 3 cut(s) 1373, 2056, 2385
MalI GATC 5 cut(s) 447, 615, 1606, 1653, 1659
MboI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
MfeI CAATTG 1 cut(s) 1647
MflI RGATCY 1 cut(s) 1604
MhlI GDGCHC 4 cut(s) 545, 650, 2142, 2223
MlsI TGGCCA 2 cut(s) 1643, 1885
MluNI TGGCCA 2 cut(s) 1643, 1885
MlyI GAGTC 2 cut(s) 691, 2393
MmeI TCCRAC 4 cut(s) 508, 591, 949, 1281
Mox20I TGGCCA 2 cut(s) 1643, 1885
Mph1103I ATGCAT 1 cut(s) 2282
MroI TCCGGA 1 cut(s) 1318
MroXI GAANNNNTTC 2 cut(s) 1817, 2105
MscI TGGCCA 2 cut(s) 1643, 1885
MslI CAYNNNNRTG 2 cut(s) 2234, 2253
Msp20I TGGCCA 2 cut(s) 1643, 1885
MspA1I CMGCKG 1 cut(s) 659
MspCI CTTAAG 1 cut(s) 1345
MspI CCGG 1 cut(s) 1319
MspR9I CCNGG 1 cut(s) 2435
MunI CAATTG 1 cut(s) 1647
MvaI CCWGG 1 cut(s) 2435
MwoI GCNNNNNNNGC 8 cut(s) 40, 1142, 1244, 1260, 1700, 1985, 2137, 2363
NdeI CATATG 1 cut(s) 2175
NdeII GATC 5 cut(s) 445, 613, 1604, 1651, 1657
NlaIII CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
NlaIV GGNNCC 2 cut(s) 1606, 2473
NmuCI GTSAC 3 cut(s) 1373, 2056, 2385
NsiI ATGCAT 1 cut(s) 2282
NspI RCATGY 1 cut(s) 1300
NspV TTCGAA 1 cut(s) 1874
PaeR7I CTCGAG 1 cut(s) 699
PciI ACATGT 1 cut(s) 1296
PciSI GCTCTTC 2 cut(s) 655, 1317
PdmI GAANNNNTTC 2 cut(s) 1817, 2105
PfeI GAWTC 6 cut(s) 773, 1685, 2207, 2315, 2449, 2485
PkrI GCNGC 4 cut(s) 36, 658, 1120, 2032
PleI GAGTC 2 cut(s) 691, 2392
PmaCI CACGTG 1 cut(s) 2300
PmlI CACGTG 1 cut(s) 2300
PpsI GAGTC 2 cut(s) 691, 2392
Ppu21I YACGTR 2 cut(s) 252, 2300
PscI ACATGT 1 cut(s) 1296
Psp1406I AACGTT 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 2433
PspCI CACGTG 1 cut(s) 2300
PspGI CCWGG 1 cut(s) 2433
PspN4I GGNNCC 2 cut(s) 1606, 2473
PspPI GGNCC 4 cut(s) 1232, 1339, 1763, 2162
PspXI VCTCGAGB 1 cut(s) 699
PstI CTGCAG 3 cut(s) 36, 658, 2521
PsuI RGATCY 1 cut(s) 1604
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 8 cut(s) 30, 83, 254, 367, 578, 982, 2018, 2539
RsaNI GTAC 8 cut(s) 29, 82, 253, 366, 577, 981, 2017, 2538
RseI CAYNNNNRTG 2 cut(s) 2234, 2253
SapI GCTCTTC 2 cut(s) 655, 1317
SatI GCNGC 4 cut(s) 35, 657, 1119, 2031
Sau3AI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
Sau96I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
ScaI AGTACT 2 cut(s) 30, 578
SchI GAGTC 2 cut(s) 691, 2393
ScrFI CCNGG 1 cut(s) 2435
SduI GDGCHC 4 cut(s) 545, 650, 2142, 2223
SfaNI GCATC 3 cut(s) 1703, 1966, 2140
SfcI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2517
Sfr274I CTCGAG 1 cut(s) 699
SfuI TTCGAA 1 cut(s) 1874
SinI GGWCC 3 cut(s) 1232, 1763, 2162
SlaI CTCGAG 1 cut(s) 699
SmiMI CAYNNNNRTG 2 cut(s) 2234, 2253
SmlI CTYRAG 3 cut(s) 699, 1345, 2444
SmoI CTYRAG 3 cut(s) 699, 1345, 2444
SspI AATATT 1 cut(s) 1267
SspMI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2358
StyD4I CCNGG 1 cut(s) 2433
StyI CCWWGG 1 cut(s) 1830
TaaI ACNGT 4 cut(s) 631, 803, 1232, 2394
TaiI ACGT 3 cut(s) 102, 254, 2302
TaqI TCGA 6 cut(s) 700, 1199, 1478, 1752, 1874, 2483
TatI WGTACW 3 cut(s) 28, 365, 576
TfiI GAWTC 6 cut(s) 773, 1685, 2207, 2315, 2449, 2485
TscAI CASTG 9 cut(s) 119, 808, 1113, 1590, 1782, 1921, 2172, 2228, 2241
TseFI GTSAC 3 cut(s) 1373, 2056, 2385
TseI GCWGC 4 cut(s) 34, 656, 1118, 2030
Tsp45I GTSAC 3 cut(s) 1373, 2056, 2385
TspGWI ACGGA 1 cut(s) 633
TspRI CASTG 9 cut(s) 119, 808, 1113, 1590, 1782, 1921, 2172, 2228, 2241
Vha464I CTTAAG 1 cut(s) 1345
VneI GTGCAC 1 cut(s) 2138
VpaK11BI GGWCC 3 cut(s) 1232, 1763, 2162
XapI RAATTY 6 cut(s) 107, 718, 1720, 1736, 1817, 2439
XceI RCATGY 1 cut(s) 1300
XhoI CTCGAG 1 cut(s) 699
XmiI GTMKAC 1 cut(s) 501
XmnI GAANNNNTTC 2 cut(s) 1817, 2105
XspI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2358
ZrmI AGTACT 2 cut(s) 30, 578
Zsp2I ATGCAT 1 cut(s) 2282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.