RLG00000016069
NAC Family

proteinaceous RNase P 1, chloroplastic mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0002433
Physical Location & Seq
Forward (+)
3660575 .. 3664040
3466 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016069

Sequence Viewer

Length: 2544 bp
ATGGCCTCCTTCACCTCCTCCAACTCAGTACTGCAGCAAAAGCACCACCACCTTCTCCACTCCATCACCACCCTCTGTAAGTACCCATCTCCTCTCAACGTTTTTGAATTCCACTGCCCCTCTCATTTCTTCACTTTCTCACCTCCCAAGCAAACACTTCAACTCAGACACACACTAAAACTCTATCCACTTCCACTAGCTAGAGAGAATATCAACCACATAGTTGCAAAGTTTTCCACCTCCACCACCACGTACCATGAACCACACACAAAGACCCTGAACTCAGCAACTGAAAAACCTGCAAAGAACAATGGCAGTTCAGTTGTGGAGAAAAAAAGTGAAGCTAGGTTCCCTAAAGAGAAAAGTACCAAGAAAAGTAGAAGGAGGGAGGGTATGTGGTTTAAAGATGAGAGTAAGGAAAGAAAGAAGAGAGGTATTGATAGTGATCAGGTGGAAGAAGAGAAAAAGGGGAGAGGGTCTAAGAAAAACAAGGTTAATGTAGACTCGCCTGAAGTTAAGATGAGAGTTGGATTGGATATGTGCTCAAAGAGAGGGGACATAATGGGTGCAATTAAGTACTATGATTTGGCTCAAACTGAGCAGATTAAGTTGGGTCAGTATCATTATACTGTTCTGTTGTATCTGTGCTCTTCTGCAGCTGTTGGTGTTGTTCGTCCTGCTAAGAGTGGGTCTGGGACTCGAGTTTTGGATACCGTGCATTCGTCTGGTGAAGGAACTGGGGTGGAAACAATGGAGTTGAGTAAGTTAAGAGACTCGGGTATTGGGAATTGGGATGATAACAGTGGAAGTGATGAGAGTTCAAGGAACAGGTTTGATGATGATGTGGATGGTGTTTCCAATGAAAAGAGGAACTTAGTGTGGTTTTCTAATGGATTTGTGAAGCGAAACTCTCGCCTGTTAGATGGACTGAACAATCCTACCAAAGTTGGAGATGATGGTACAAGTCTAAAAGATGGAAATGTGATGCAAGAAAGCAATGAGATTCGGGTTAGTGAGGATGTGAAGAAGTATGCACTCCAAAGGGGATTTGAGATTTATGAGAAGATGTGTTTGGATGGTGTCCCAGTGAATGAAGCAGCATTGACATCTGTGGCTAGAATGGCAATGTCAATGGGGGACGGAGACATGGCATTTGACATGGTGAAGCAGATGAAATCGATGGGAATAAATCCTAGACTGCGTTCCTATGGTCCTGCGTTATCTGCTTTTTGCAGTAGTGGCAATATTGACAAAGCGTTTGCTGTTGAGAAACACATGTTGGAGCATGATGTCTATCCAGAAGAGCCTGAACTGGAGGCCCTCTTAAGAGTGAGTGTGGGAGCTGGAAAAGGTGACAAGGTGTATTATATGTTGCAGAAACTAAGAACAAGTGTAAGGAGTGTCTCACCCTCTACTGCTGACTTAATTGTAAAGTGGTTTAATAGCAAGGAAGCGTCGAGAGTGGGAAAGACAAAATGGGACGAAAGATTGATAAGGCAGGCCATTGAAAATGGAGGTGGTGGGTGGCATGGGCAGGGATGGTTGGGGAAAGGAAAGTGGTCAGTGCTACTTACAACTATTGGATCCGATGGCCTGTGCAAATGCTGTGGGGGAAAATTGGCCACAATTGATCTTGATCCTGTAGAAACAGAAAACTTTGCTGAATCAGTTGCATCTATAGCTATAAAGAGAGAGAAAAATTCAAGCTTTCAGAAATTTCAAAAATGGCTCAATTATTATGGACCTTTTGAAGCAGTGGTGGATGGAGCTAATGTAGGTCTTTTCAGCCAGAAGAAATTCATCCCAGCCAAGGTCAATGCTGTCGTTAATGGCATACGCCAGAAGCTTCCTTCGAAGAGATGGCCACTCATTGTTCTTCATAATAGGCGTATCACTGGAGGCAGAATGGATGAACGGGTGAATAAGGCGTTGATTGAGAAGTGGCAAAATGCTGATGCTCTCTATGCAACGCCTACTGGGTCAAATGATGATTGGTACTGGTTGTATGCTGCAATTAAGTTCAAGTGCTTACTTGTGACAAATGATGAGATGAGAGACCATACATTTCAACTTCTAGGGAATGATTTCTTTCCAAGATGGAAAGAAAGGCATCAAGTGCACTTCAGTTTCTCTGAAGGTGGTCCAGTGTTTCATATGCCTCCTCCTTGTTCTGTTGTAATTCAGGAATCAGAGGAAGGGCACTGGCACATTCCAGTGGTGTCAGAGCATGGTTATGAAGCTGAAAGAATGTGGTTATGCATTATGCGAGCTAAATCACGTGAGGCAAGGAAGGATTCTGCAACCAGACCTGAAGATGCAGAACCTCAAAACAAGGGATTTGCAAGGTCAGCTACCAGAACTGGCATTGAGTCACAACCGTTGAAAATTGCGAACCACAAATATACTAAACACCAACCCCAGGAAATTCTCAAGAATCTCAAAGATATTCTATCAGGATCCACAATCTCGAATCATCGTTCCATAATACCAGAAATTGAGACTGCAGAGAAGATTGGTGGATGTACCATTGACTTTCAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
PPR_long PRORP

Protein Analysis

848

Amino Acids

95.23

Weight (kDa)

9.07

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 162 - 239 4.6e-14 Pentacotripeptide-repeat region of PRORP
PPR_long PF17177 341 - 486 3.7e-53 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 367 - 478 2.3e-07 Fungal tetratrico peptide repeats
PRORP PF16953 527 - 753 1.4e-80 Protein-only RNase P
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 307
AccI GTMKAC 1 cut(s) 501
AclI AACGTT 1 cut(s) 99
AclWI GGATC 5 cut(s) 1578, 1591, 1631, 2451, 2464
AcoI YGGCCR 2 cut(s) 1620, 1862
AcsI RAATTY 5 cut(s) 107, 1699, 1715, 1796, 2424
AcuI CTGAAG 4 cut(s) 531, 2107, 2154, 2331
AcvI CACGTG 1 cut(s) 2279
AfaI GTAC 8 cut(s) 30, 83, 254, 367, 578, 961, 1997, 2524
AfiI CCNNNNNNNGG 2 cut(s) 1810, 2419
AflII CTTAAG 1 cut(s) 1324
AflIII ACRYGT 1 cut(s) 1275
AjnI CCWGG 1 cut(s) 2418
AjuI GAANNNNNNNTTGG 4 cut(s) 1055, 1087, 1262, 1294
Alw21I GWGCWC 3 cut(s) 545, 650, 2121
Alw26I GTCTC 5 cut(s) 765, 1137, 1408, 2049, 2492
Alw44I GTGCAC 1 cut(s) 2117
AlwI GGATC 5 cut(s) 1578, 1591, 1631, 2451, 2464
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 2 cut(s) 699, 775
AoxI GGCC 6 cut(s) 3, 1317, 1500, 1591, 1620, 1862
ApaLI GTGCAC 1 cut(s) 2117
ApeKI GCWGC 4 cut(s) 34, 656, 1097, 2009
ApoI RAATTY 5 cut(s) 107, 1699, 1715, 1796, 2424
ArsI GACNNNNNNTTYG 6 cut(s) 688, 720, 1136, 1168, 1241, 1273
Asp700I GAANNNNTTC 2 cut(s) 1796, 2084
AspS9I GGNCC 4 cut(s) 1211, 1318, 1742, 2141
AsuHPI GGTGA 8 cut(s) 4, 58, 132, 740, 1174, 1364, 1398, 1930
AsuII TTCGAA 1 cut(s) 1853
AvaI CYCGRG 2 cut(s) 699, 775
AvaII GGWCC 3 cut(s) 1211, 1742, 2141
BaeGI GKGCMC 2 cut(s) 2121, 2202
BalI TGGCCA 2 cut(s) 1622, 1864
BamHI GGATCC 2 cut(s) 1583, 2456
BbrPI CACGTG 1 cut(s) 2279
Bbv12I GWGCWC 3 cut(s) 545, 650, 2121
BbvI GCAGC 4 cut(s) 46, 668, 1109, 1996
BciT130I CCWGG 1 cut(s) 2420
BciVI GTATCC 1 cut(s) 703
BclI TGATCA 1 cut(s) 445
BcoDI GTCTC 5 cut(s) 765, 1137, 1408, 2049, 2492
BfaI CTAG 6 cut(s) 197, 201, 345, 1116, 1194, 2075
BfmI CTRYAG 5 cut(s) 32, 654, 1641, 1677, 2502
BfrI CTTAAG 1 cut(s) 1324
BfuAI ACCTGC 1 cut(s) 307
BfuI GTATCC 1 cut(s) 703
BisI GCNGC 4 cut(s) 35, 657, 1098, 2010
BlsI GCNGC 4 cut(s) 36, 658, 1099, 2011
BmcAI AGTACT 2 cut(s) 30, 578
Bme1390I CCNGG 1 cut(s) 2420
Bme18I GGWCC 3 cut(s) 1211, 1742, 2141
BmeT110I CYCGRG 2 cut(s) 699, 775
BmgT120I GGNCC 4 cut(s) 1211, 1318, 1742, 2141
BmiI GGNNCC 3 cut(s) 350, 1585, 2458
BmrFI CCNGG 1 cut(s) 2420
BmrI ACTGGG 3 cut(s) 747, 1079, 1986
BmsI GCATC 5 cut(s) 975, 1682, 1945, 2119, 2305
BmuI ACTGGG 3 cut(s) 747, 1079, 1986
BpmI CTGGAG 2 cut(s) 1334, 1917
Bpu14I TTCGAA 1 cut(s) 1853
BpuEI CTTGAG 1 cut(s) 2414
Bsa29I ATCGAT 1 cut(s) 1178
BsaAI YACGTR 2 cut(s) 252, 2279
BsaBI GATNNNNATC 3 cut(s) 444, 1293, 1635
BsaI GGTCTC 1 cut(s) 2049
BsaJI CCNNGG 2 cut(s) 1809, 2418
BsaXI ACNNNNNCTCC 6 cut(s) 376, 380, 406, 410, 1758, 1788
Bsc4I CCNNNNNNNGG 2 cut(s) 1810, 2419
Bse3DI GCAATG 2 cut(s) 1003, 1131
Bse8I GATNNNNATC 3 cut(s) 444, 1293, 1635
BseBI CCWGG 1 cut(s) 2420
BseCI ATCGAT 1 cut(s) 1178
BseDI CCNNGG 2 cut(s) 1809, 2418
BseGI GGATG 9 cut(s) 799, 853, 1024, 1081, 1544, 1768, 1800, 1915, 2525
BseJI GATNNNNATC 3 cut(s) 444, 1293, 1635
BseLI CCNNNNNNNGG 2 cut(s) 1810, 2419
BseMI GCAATG 2 cut(s) 1003, 1131
BseMII CTCAG 4 cut(s) 39, 178, 297, 588
BseRI GAGGAG 3 cut(s) 7, 81, 2151
BseSI GKGCMC 2 cut(s) 2121, 2202
BseXI GCAGC 4 cut(s) 46, 668, 1109, 1996
BseYI CCCAGC 1 cut(s) 1804
BshFI GGCC 6 cut(s) 5, 1319, 1502, 1593, 1622, 1864
BshVI ATCGAT 1 cut(s) 1178
BsiHKAI GWGCWC 3 cut(s) 545, 650, 2121
BsiHKCI CYCGRG 2 cut(s) 699, 775
BslFI GGGAC 5 cut(s) 569, 709, 1067, 1151, 1493
BslI CCNNNNNNNGG 2 cut(s) 1810, 2419
BsmAI GTCTC 5 cut(s) 765, 1137, 1408, 2049, 2492
BsmFI GGGAC 5 cut(s) 569, 709, 1067, 1151, 1493
BsmI GAATGC 1 cut(s) 718
BsnI GGCC 6 cut(s) 5, 1319, 1502, 1593, 1622, 1864
Bso31I GGTCTC 1 cut(s) 2049
BsoBI CYCGRG 2 cut(s) 699, 775
Bsp119I TTCGAA 1 cut(s) 1853
Bsp1286I GDGCHC 4 cut(s) 545, 650, 2121, 2202
Bsp143I GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
BspANI GGCC 6 cut(s) 5, 1319, 1502, 1593, 1622, 1864
BspCNI CTCAG 4 cut(s) 38, 177, 296, 589
BspDI ATCGAT 1 cut(s) 1178
BspLI GGNNCC 3 cut(s) 350, 1585, 2458
BspMAI CTGCAG 3 cut(s) 36, 658, 2506
BspMI ACCTGC 1 cut(s) 307
BspPI GGATC 5 cut(s) 1578, 1591, 1631, 2451, 2464
BspQI GCTCTTC 2 cut(s) 655, 1296
BspT104I TTCGAA 1 cut(s) 1853
BspTI CTTAAG 1 cut(s) 1324
BspTNI GGTCTC 1 cut(s) 2049
BsrDI GCAATG 2 cut(s) 1003, 1131
BssECI CCNNGG 2 cut(s) 1809, 2418
BssMI GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
BssT1I CCWWGG 1 cut(s) 1809
Bst2UI CCWGG 1 cut(s) 2420
Bst4CI ACNGT 4 cut(s) 631, 715, 803, 2379
Bst6I CTCTTC 5 cut(s) 422, 453, 655, 1296, 1850
BstAFI CTTAAG 1 cut(s) 1324
BstAPI GCANNNNNTGC 1 cut(s) 2116
BstBAI YACGTR 2 cut(s) 252, 2279
BstBI TTCGAA 1 cut(s) 1853
BstC8I GCNNGC 2 cut(s) 1500, 2268
BstDEI CTNAG 8 cut(s) 25, 164, 283, 480, 597, 681, 874, 1382
BstF5I GGATG 9 cut(s) 799, 853, 1024, 1081, 1544, 1768, 1800, 1915, 2525
BstKTI GATC 5 cut(s) 448, 1586, 1633, 1639, 2459
BstMAI GTCTC 5 cut(s) 765, 1137, 1408, 2049, 2492
BstMBI GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
BstMWI GCNNNNNNNGC 8 cut(s) 40, 1121, 1223, 1239, 1679, 1964, 2116, 2348
BstNI CCWGG 1 cut(s) 2420
BstNSI RCATGY 1 cut(s) 1279
BstSCI CCNGG 1 cut(s) 2418
BstSFI CTRYAG 5 cut(s) 32, 654, 1641, 1677, 2502
BstSLI GKGCMC 2 cut(s) 2121, 2202
BstV1I GCAGC 4 cut(s) 46, 668, 1109, 1996
BstX2I RGATCY 2 cut(s) 1583, 2456
BstYI RGATCY 2 cut(s) 1583, 2456
Bsu15I ATCGAT 1 cut(s) 1178
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 6 cut(s) 5, 1319, 1502, 1593, 1622, 1864
BsuTUI ATCGAT 1 cut(s) 1178
BtsCI GGATG 9 cut(s) 799, 853, 1024, 1081, 1544, 1768, 1800, 1915, 2525
BtsI GCAGTG 2 cut(s) 112, 1761
BtsIMutI CAGTG 9 cut(s) 112, 808, 1092, 1569, 1761, 1893, 2151, 2200, 2220
BveI ACCTGC 1 cut(s) 307
Cac8I GCNNGC 2 cut(s) 1500, 2268
CaiI CAGNNNCTG 1 cut(s) 290
Cfr13I GGNCC 4 cut(s) 1211, 1318, 1742, 2141
ClaI ATCGAT 1 cut(s) 1178
CseI GACGC 1 cut(s) 1443
Csp6I GTAC 8 cut(s) 29, 82, 253, 366, 577, 960, 1996, 2523
CspCI CAANNNNNGTGG 2 cut(s) 1588, 1623
CviAII CATG 7 cut(s) 257, 1147, 1159, 1276, 1286, 1529, 2228
CviQI GTAC 8 cut(s) 29, 82, 253, 366, 577, 960, 1996, 2523
DdeI CTNAG 8 cut(s) 25, 164, 283, 480, 597, 681, 874, 1382
DpnI GATC 5 cut(s) 447, 1585, 1632, 1638, 2458
DpnII GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
DraI TTTAAA 1 cut(s) 403
EaeI YGGCCR 2 cut(s) 1620, 1862
Eam1104I CTCTTC 5 cut(s) 422, 453, 655, 1296, 1850
EarI CTCTTC 5 cut(s) 422, 453, 655, 1296, 1850
Eco130I CCWWGG 1 cut(s) 1809
Eco31I GGTCTC 1 cut(s) 2049
Eco47I GGWCC 3 cut(s) 1211, 1742, 2141
Eco57I CTGAAG 4 cut(s) 531, 2107, 2154, 2331
Eco72I CACGTG 1 cut(s) 2279
Eco88I CYCGRG 2 cut(s) 699, 775
EcoO109I RGGNCCY 1 cut(s) 1318
EcoRI GAATTC 1 cut(s) 107
EcoRII CCWGG 1 cut(s) 2418
EcoT14I CCWWGG 1 cut(s) 1809
EcoT22I ATGCAT 1 cut(s) 2261
ErhI CCWWGG 1 cut(s) 1809
FaeI CATG 7 cut(s) 260, 1150, 1162, 1279, 1289, 1532, 2231
FalI AAGNNNNNCTT 2 cut(s) 857, 889
FaqI GGGAC 5 cut(s) 569, 709, 1067, 1151, 1493
FatI CATG 7 cut(s) 256, 1146, 1158, 1275, 1285, 1528, 2227
FauNDI CATATG 1 cut(s) 2154
FbaI TGATCA 1 cut(s) 445
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 4 cut(s) 35, 657, 1098, 2010
FokI GGATG 9 cut(s) 806, 860, 1031, 1088, 1551, 1775, 1787, 1922, 2532
Fsp4HI GCNGC 4 cut(s) 35, 657, 1098, 2010
FspBI CTAG 6 cut(s) 197, 201, 345, 1116, 1194, 2075
GluI GCNGC 4 cut(s) 35, 657, 1098, 2010
GsaI CCCAGC 1 cut(s) 1808
GsuI CTGGAG 2 cut(s) 1334, 1917
HaeIII GGCC 6 cut(s) 5, 1319, 1502, 1593, 1622, 1864
HgaI GACGC 1 cut(s) 1443
Hin1II CATG 7 cut(s) 260, 1150, 1162, 1279, 1289, 1532, 2231
HindIII AAGCTT 2 cut(s) 1705, 1844
HphI GGTGA 8 cut(s) 4, 58, 132, 740, 1174, 1364, 1398, 1930
Hpy166II GTNNAC 2 cut(s) 502, 2119
Hpy188I TCNGA 6 cut(s) 167, 1588, 1713, 2134, 2191, 2224
Hpy188III TCNNGA 7 cut(s) 1298, 1458, 1634, 2183, 2431, 2454, 2467
Hpy8I GTNNAC 2 cut(s) 502, 2119
Hpy99I CGWCG 1 cut(s) 1459
HpyAV CCTTC 8 cut(s) 19, 62, 375, 725, 1860, 2129, 2189, 2284
HpyCH4III ACNGT 4 cut(s) 631, 715, 803, 2379
HpyCH4IV ACGT 3 cut(s) 99, 251, 2278
HpyF10VI GCNNNNNNNGC 8 cut(s) 40, 1121, 1223, 1239, 1679, 1964, 2116, 2348
HpyF3I CTNAG 8 cut(s) 25, 164, 283, 480, 597, 681, 874, 1382
HpySE526I ACGT 3 cut(s) 99, 251, 2278
Hsp92II CATG 7 cut(s) 260, 1150, 1162, 1279, 1289, 1532, 2231
Ksp22I TGATCA 1 cut(s) 445
Kzo9I GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
LguI GCTCTTC 2 cut(s) 655, 1296
LmnI GCTCC 3 cut(s) 1282, 1340, 1766
Lsp1109I GCAGC 4 cut(s) 46, 668, 1109, 1996
LweI GCATC 5 cut(s) 975, 1682, 1945, 2119, 2305
MaeI CTAG 6 cut(s) 197, 201, 345, 1116, 1194, 2075
MaeII ACGT 3 cut(s) 99, 251, 2278
MaeIII GTNAC 3 cut(s) 1352, 2035, 2370
MalI GATC 5 cut(s) 447, 1585, 1632, 1638, 2458
MboI GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
MfeI CAATTG 1 cut(s) 1626
MflI RGATCY 2 cut(s) 1583, 2456
MhlI GDGCHC 4 cut(s) 545, 650, 2121, 2202
MlsI TGGCCA 2 cut(s) 1622, 1864
MluNI TGGCCA 2 cut(s) 1622, 1864
MlyI GAGTC 4 cut(s) 497, 691, 767, 2378
MmeI TCCRAC 4 cut(s) 45, 508, 928, 1260
Mox20I TGGCCA 2 cut(s) 1622, 1864
Mph1103I ATGCAT 1 cut(s) 2261
MroXI GAANNNNTTC 2 cut(s) 1796, 2084
MscI TGGCCA 2 cut(s) 1622, 1864
MslI CAYNNNNRTG 2 cut(s) 2213, 2232
Msp20I TGGCCA 2 cut(s) 1622, 1864
MspA1I CMGCKG 1 cut(s) 659
MspCI CTTAAG 1 cut(s) 1324
MspR9I CCNGG 1 cut(s) 2420
MunI CAATTG 1 cut(s) 1626
Mva1269I GAATGC 1 cut(s) 718
MvaI CCWGG 1 cut(s) 2420
MwoI GCNNNNNNNGC 8 cut(s) 40, 1121, 1223, 1239, 1679, 1964, 2116, 2348
NdeI CATATG 1 cut(s) 2154
NdeII GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
NlaIII CATG 7 cut(s) 260, 1150, 1162, 1279, 1289, 1532, 2231
NlaIV GGNNCC 3 cut(s) 350, 1585, 2458
NmuCI GTSAC 3 cut(s) 1352, 2035, 2370
NsiI ATGCAT 1 cut(s) 2261
NspI RCATGY 1 cut(s) 1279
NspV TTCGAA 1 cut(s) 1853
PaeR7I CTCGAG 1 cut(s) 699
PciI ACATGT 1 cut(s) 1275
PciSI GCTCTTC 2 cut(s) 655, 1296
PctI GAATGC 1 cut(s) 718
PdmI GAANNNNTTC 2 cut(s) 1796, 2084
PfeI GAWTC 6 cut(s) 1003, 1664, 2186, 2294, 2434, 2470
PkrI GCNGC 4 cut(s) 36, 658, 1099, 2011
PleI GAGTC 4 cut(s) 497, 691, 767, 2377
PmaCI CACGTG 1 cut(s) 2279
PmlI CACGTG 1 cut(s) 2279
PpsI GAGTC 4 cut(s) 497, 691, 767, 2377
Ppu21I YACGTR 2 cut(s) 252, 2279
PscI ACATGT 1 cut(s) 1275
Psp1406I AACGTT 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 2418
PspCI CACGTG 1 cut(s) 2279
PspFI CCCAGC 1 cut(s) 1804
PspGI CCWGG 1 cut(s) 2418
PspN4I GGNNCC 3 cut(s) 350, 1585, 2458
PspPI GGNCC 4 cut(s) 1211, 1318, 1742, 2141
PspXI VCTCGAGB 1 cut(s) 699
PstI CTGCAG 3 cut(s) 36, 658, 2506
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 2 cut(s) 1583, 2456
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 8 cut(s) 30, 83, 254, 367, 578, 961, 1997, 2524
RsaNI GTAC 8 cut(s) 29, 82, 253, 366, 577, 960, 1996, 2523
RseI CAYNNNNRTG 2 cut(s) 2213, 2232
SapI GCTCTTC 2 cut(s) 655, 1296
SatI GCNGC 4 cut(s) 35, 657, 1098, 2010
Sau3AI GATC 5 cut(s) 445, 1583, 1630, 1636, 2456
Sau96I GGNCC 4 cut(s) 1211, 1318, 1742, 2141
ScaI AGTACT 2 cut(s) 30, 578
SchI GAGTC 4 cut(s) 497, 691, 767, 2378
ScrFI CCNGG 1 cut(s) 2420
SduI GDGCHC 4 cut(s) 545, 650, 2121, 2202
SfaNI GCATC 5 cut(s) 975, 1682, 1945, 2119, 2305
SfcI CTRYAG 5 cut(s) 32, 654, 1641, 1677, 2502
Sfr274I CTCGAG 1 cut(s) 699
SfuI TTCGAA 1 cut(s) 1853
SinI GGWCC 3 cut(s) 1211, 1742, 2141
SlaI CTCGAG 1 cut(s) 699
SmiMI CAYNNNNRTG 2 cut(s) 2213, 2232
SmlI CTYRAG 3 cut(s) 699, 1324, 2429
SmoI CTYRAG 3 cut(s) 699, 1324, 2429
SspI AATATT 1 cut(s) 1246
SspMI CTAG 6 cut(s) 197, 201, 345, 1116, 1194, 2075
StyD4I CCNGG 1 cut(s) 2418
StyI CCWWGG 1 cut(s) 1809
TaaI ACNGT 4 cut(s) 631, 715, 803, 2379
TaiI ACGT 3 cut(s) 102, 254, 2281
TaqI TCGA 5 cut(s) 700, 1178, 1457, 1853, 2468
TatI WGTACW 2 cut(s) 28, 576
TfiI GAWTC 6 cut(s) 1003, 1664, 2186, 2294, 2434, 2470
TscAI CASTG 9 cut(s) 119, 808, 1092, 1569, 1761, 1900, 2151, 2207, 2220
TseFI GTSAC 3 cut(s) 1352, 2035, 2370
TseI GCWGC 4 cut(s) 34, 656, 1097, 2009
Tsp45I GTSAC 3 cut(s) 1352, 2035, 2370
TspDTI ATGAA 9 cut(s) 273, 876, 1107, 1187, 1789, 1868, 1926, 2141, 2250
TspGWI ACGGA 1 cut(s) 1155
TspRI CASTG 9 cut(s) 119, 808, 1092, 1569, 1761, 1900, 2151, 2207, 2220
Vha464I CTTAAG 1 cut(s) 1324
VneI GTGCAC 1 cut(s) 2117
VpaK11BI GGWCC 3 cut(s) 1211, 1742, 2141
XapI RAATTY 5 cut(s) 107, 1699, 1715, 1796, 2424
XceI RCATGY 1 cut(s) 1279
XhoI CTCGAG 1 cut(s) 699
XmiI GTMKAC 1 cut(s) 501
XmnI GAANNNNTTC 2 cut(s) 1796, 2084
XspI CTAG 6 cut(s) 197, 201, 345, 1116, 1194, 2075
ZrmI AGTACT 2 cut(s) 30, 578
Zsp2I ATGCAT 1 cut(s) 2261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.