Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002433

Physical Location & Seq

Genomic Coordinates Forward (+)

20369829 .. 20375130

Gene Structure 5302 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G233700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGCGAAGGTCAAGGTCACCTTGGAGGTCGGGAACGACGGCGTTGCTGTGATCACCATATTTAATCCCCCTGTCAACGCCTTGGCCATACCGCTTATAGCGGGGTTGAAGGAGAAGTTCGACGAAGTCGCGAGAAGAAATGATGTCAGGGCTATCGTTTTGACTGGCAATGGAGGAAGGTTTTCTGGTGGTTTTGATATCAATGTTTTCGAGAAGGTTCACAAGTCTGGGGATGTTTCACTTATGCCCGATGTCTCTGTTGAATTTTTGGTTAACAAACTTGAAGATTCAAAAAAACCTGTTGTTGCTGCTGTGGAAGGACTTGCACTTGGAGGTGGCTTGGAGTTGGCATTGGGGTGCCATGCACGAATTGCTGCTCCAAGAACTCAACTTGGCCTGCCAGAGTTGACACTTGGAGTAATTCCAGGATTTGGAGGCACACAACGTCTTCCAAGGCTTGTAGGGCTTCGTAAGGCAGTTGAAATGATGCTGTTATCCAAGTCAATCATGTCTGAAGAAGGGAAGAAGCTTGGTCTTATCGATGCTATTGTGCCTTCTCAAGAGTTGCTGAAAGTATCTCGTTTATGGGCTTTGGACATTGCTGAGAGGCGCAAACCTTGGTTGCGCTCTCTTCACAGGACAGATAAGCTTGGTTCCCTGTCTGAGGCACGTGAGATACTGAAAGTTGCTAGACAACAAGCCAGGAAGACTGCTCCCAACATGCCTCAGCACCAAGCATGCCTCGATGTGATTGAGGATGGCATTGTTCATGGAGGATACAGTGGTGTTCTAAAGGAGGCTAAAATTTTTAAGGAGTTAGTTCTGTCAGACACTTCAAAAGGTCTTGTCCATGTCTTTTTTGCCCAACGTGCAACATCTAAGGTACCCAATGTTACTGATGTTGGCCTTAAACCAAGACATGTAAAGAAAGTTGCTGTTATTGGGGGAGGTCTGATGGGTTCTGGCATAGCTACGGCCCTTCTTCTGAGCAATATATATGTTGTTCTCAAGGAAGTCAACTCTGAATATCTCCAGAAGGGCATAAAAACGATAGAAGCAAATGTTAAAGGATTAGTAACTAAAGGGAAGTTGACACAGGATAAGGCACAGCAAACTCTCTCATTGCTTAAAGGTAGTTTGGACTACTCAGACTTCAAAGATGTGGATATGGTCATTGAGGCTGTGATTGAGAATGTTCCTCTCAAACAAAAAATTTTCGGTGAACTCGAGAAAGTATGCCCTTCTCACTGCATTTTGGCTACAAACACATCCACTATTGACCTCAATGTAGTAGGAGAAAAGACAAGCTCTCATGATCGCATTGTGGGGGCTCATTTTTTCAGTCCTGCTCATGTGATGCCTCTTCTTGAAATTGTACGAACAGAGAAGACTTCTGCACAAGTAATTCTTGATCTTTTGACGGTCGGAAAAATAATAAAGAAAGTTCCTGTTGTGGTTGGTAACTGCACGGGATTTGCAGTAAATCGAGCATTCTTTCCCTATTCACAAGGTGCACATATATTGGTCAATTCAGGAGTGGATGTATTCAGAATTGACAGGGTCATCAGCAATTTTGGTTTCCCTATTGGTCCATTCCAGCTTCAGGACTTGGCTGGCTATGGAGTAGCCCTTGCAGTTGGAAAGGAATTTGCTACTGCTTTCCCAGATCGCACATTTAGATCTCCATTGGTTGAGATCTTGATCAAACATGGACGAAACGGTAAAAACAATGGGAAGGGATATTACATTTATGAAAAGGGAAGCAAGCCAAAACCTGATCTTTCTGTGCTACCAATTATTGAGGAATCTAGACGAGTTACCAATATTATGCCTGGTGGCAAGCCTTTATCTGTTACAGACCAAGAAATTCTTGAGATGATACTCTTCCCTGTGGTGAATGAGGCATGTCGTATTCTAGATGAAGGAATAGTTGTTCGAGCATCGGACCTTGACATTGCATCTGTTCTTGGGATGAGTTTCCCATCTTACCGGGGTGGTATTATATTTTGGGCAGACCTGGTTGGGCCTAAGCATATATACGATAGTCTCAAGAAATGGTCCGGAGTATATGGTAACTTTTACAGACCATCGAGATTTTTGGAAGAAAGAGCAATGAAGGGTGTGCCACTGAGTGCACCCGCTTCAACATCCCCATCGTCAAGGTCACGTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003857 GO:0004300 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009506 GO:0009507 GO:0009536 GO:0009694 GO:0009695 GO:0009791 GO:0009908 GO:0009987 GO:0010817 GO:0016042 GO:0016053 GO:0016054 GO:0016491 GO:0016614 GO:0016616 GO:0016829 GO:0016835 GO:0016836 GO:0019395 GO:0019752 GO:0022414 GO:0030054 GO:0030258 GO:0030312 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046395 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0055044 GO:0055114 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072329 GO:0072330 GO:0090567 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01100 ko01110 ko01212 map00071 map00592 map01100 map01110 map01212

Pfam Domains

Protein Families

3HCDH 3HCDH_N ECH_1

Protein Analysis

725

Amino Acids

78.65

Weight (kDa)

9.4

Isoelectric Point (pI)

37.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29010
fragaria_vesca	FvH4_1g04350 FvH4_1g04370
malus_domestica	MD02G1043200.v1.1 MD02G1043300.v1.1 MD02G1043500.v1.1 MD15G1181900.v1.1
prunus_persica	Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233500_v2.0.a1 Prupe.7G233700_v2.0.a1 Prupe.7G233700_v2.0.a1 Prupe.7G233700_v2.0.a1
pyrus_communis	pycom02g03600 pycom02g03620 pycom15g16410
rosa_chinensis	RchiOBHm_Chr2g0090001 RchiOBHm_Chr2g0090021
rosa_laevigata	RLG00000016068 RLG00000016069 RLG00000016072 RLG00000016076
rosa_multiflora	Rmu_sc0000226.1_g000018 Rmu_sc0024500.1_g000001
rosa_roxburghii	Rroxscaffold_2G00151470
rosa_rugosa	Rorug02G0004600 Rorug02G0004600 Rorug02G0004700
rosa_samantha	Rh2AG049800 Rh2AG049900 Rh2BG048500 Rh2BG048700 Rh2CG050700 Rh2CG050900 Rh2DG050000 Rh2DG050100 Rh5DG028300
rosa_wichuraiana	Rw2G004050 Rw2G004070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	883
AccB1I	GGYRCC	2 cut(s)	357, 883
AccB7I	CCANNNNNTGG	1 cut(s)	431
AccII	CGCG	1 cut(s)	131
AccIII	TCCGGA	1 cut(s)	2060
AciI	CCGC	3 cut(s)	92, 101, 2139
AcoI	YGGCCR	1 cut(s)	84
AcsI	RAATTY	5 cut(s)	263, 804, 1212, 1646, 1866
AcuI	CTGAAG	2 cut(s)	534, 1586
AcvI	CACGTG	1 cut(s)	671
AdeI	CACNNNGTG	2 cut(s)	1511, 2132
AfaI	GTAC	2 cut(s)	885, 1377
AfiI	CCNNNNNNNGG	3 cut(s)	431, 664, 1603
AflIII	ACRYGT	1 cut(s)	919
AgsI	TTSAA	9 cut(s)	109, 263, 284, 291, 482, 837, 1156, 1370, 2145
AjnI	CCWGG	4 cut(s)	424, 701, 1831, 2016
AloI	GAACNNNNNNTCC	2 cut(s)	1917, 1949
AluBI	AGCT	5 cut(s)	529, 649, 971, 1308, 1600
AluI	AGCT	5 cut(s)	529, 649, 971, 1308, 1600
Alw21I	GWGCWC	2 cut(s)	1516, 2137
Alw26I	GTCTC	2 cut(s)	259, 2051
Alw44I	GTGCAC	2 cut(s)	1512, 2133
Ama87I	CYCGRG	1 cut(s)	1226
Aor13HI	TCCGGA	1 cut(s)	2060
AoxI	GGCC	5 cut(s)	84, 394, 904, 975, 2024
ApaLI	GTGCAC	2 cut(s)	1512, 2133
ApeKI	GCWGC	2 cut(s)	308, 374
ApoI	RAATTY	5 cut(s)	263, 804, 1212, 1646, 1866
Asp700I	GAANNNNTTC	1 cut(s)	181
Asp718I	GGTACC	1 cut(s)	883
AspLEI	GCGC	2 cut(s)	612, 627
AspS9I	GGNCC	5 cut(s)	976, 1589, 1945, 2024, 2058
AsuC2I	CCSGG	1 cut(s)	1991
AsuHPI	GGTGA	4 cut(s)	10, 46, 1232, 1906
AvaI	CYCGRG	1 cut(s)	1226
AvaII	GGWCC	3 cut(s)	1589, 1945, 2058
BaeGI	GKGCMC	2 cut(s)	1516, 2137
BaeI	ACNNNNGTAYC	2 cut(s)	769, 802
BalI	TGGCCA	1 cut(s)	86
BanI	GGYRCC	2 cut(s)	357, 883
BanII	GRGCYC	1 cut(s)	1333
BarI	GAAGNNNNNNTAC	2 cut(s)	1727, 1759
BbrPI	CACGTG	1 cut(s)	671
BbsI	GAAGAC	3 cut(s)	440, 713, 1394
Bbv12I	GWGCWC	2 cut(s)	1516, 2137
BbvCI	CCTCAGC	1 cut(s)	726
BbvI	GCAGC	2 cut(s)	295, 361
BccI	CCATC	5 cut(s)	752, 949, 1990, 2095, 2161
BceAI	ACGGC	2 cut(s)	55, 990
BcgI	CGANNNNNNTGC	2 cut(s)	26, 60
BciT130I	CCWGG	4 cut(s)	426, 703, 1833, 2018
BciVI	GTATCC	1 cut(s)	770
BclI	TGATCA	2 cut(s)	51, 1701
BcnI	CCSGG	1 cut(s)	1991
BcoDI	GTCTC	2 cut(s)	259, 2051
BfaI	CTAG	3 cut(s)	690, 1809, 1916
BfuI	GTATCC	1 cut(s)	770
BglII	AGATCT	2 cut(s)	1679, 1695
BisI	GCNGC	2 cut(s)	309, 375
BlsI	GCNGC	2 cut(s)	310, 376
Bme1390I	CCNGG	5 cut(s)	426, 703, 1833, 1991, 2018
Bme18I	GGWCC	3 cut(s)	1589, 1945, 2058
BmeT110I	CYCGRG	1 cut(s)	1226
BmgT120I	GGNCC	5 cut(s)	976, 1589, 1945, 2024, 2058
BmiI	GGNNCC	3 cut(s)	359, 655, 885
BmrFI	CCNGG	5 cut(s)	426, 703, 1833, 1991, 2018
BmsI	GCATC	5 cut(s)	477, 532, 1347, 1949, 1967
BpiI	GAAGAC	3 cut(s)	440, 713, 1394
BpmI	CTGGAG	1 cut(s)	1016
Bpu10I	CCTNAGC	2 cut(s)	726, 2028
BpuEI	CTTGAG	4 cut(s)	543, 992, 1892, 2033
BpuMI	CCSGG	1 cut(s)	1991
Bsa29I	ATCGAT	1 cut(s)	540
BsaAI	YACGTR	2 cut(s)	671, 2168
BsaBI	GATNNNNATC	1 cut(s)	1700
BsaJI	CCNNGG	5 cut(s)	21, 81, 452, 617, 1990
BsaWI	WCCGGW	1 cut(s)	2060
BsaXI	ACNNNNNCTCC	2 cut(s)	1527, 1557
Bsc4I	CCNNNNNNNGG	3 cut(s)	431, 664, 1603
Bse1I	ACTGG	1 cut(s)	169
Bse3DI	GCAATG	5 cut(s)	175, 597, 1121, 1953, 2118
Bse8I	GATNNNNATC	1 cut(s)	1700
BseAI	TCCGGA	1 cut(s)	2060
BseBI	CCWGG	4 cut(s)	426, 703, 1833, 2018
BseCI	ATCGAT	1 cut(s)	540
BseDI	CCNNGG	5 cut(s)	21, 81, 452, 617, 1990
BseGI	GGATG	6 cut(s)	238, 763, 1268, 1546, 1977, 2147
BseJI	GATNNNNATC	1 cut(s)	1700
BseLI	CCNNNNNNNGG	3 cut(s)	431, 664, 1603
BseMI	GCAATG	5 cut(s)	175, 597, 1121, 1953, 2118
BseMII	CTCAG	6 cut(s)	594, 654, 740, 977, 1161, 2120
BseNI	ACTGG	1 cut(s)	169
BseSI	GKGCMC	2 cut(s)	1516, 2137
BseXI	GCAGC	2 cut(s)	295, 361
BsgI	GTGCAG	2 cut(s)	1380, 1450
Bsh1236I	CGCG	1 cut(s)	131
Bsh1285I	CGRYCG	1 cut(s)	1425
BshFI	GGCC	5 cut(s)	86, 396, 906, 977, 2026
BshNI	GGYRCC	2 cut(s)	357, 883
BshVI	ATCGAT	1 cut(s)	540
BsiEI	CGRYCG	1 cut(s)	1425
BsiHKAI	GWGCWC	2 cut(s)	1516, 2137
BsiHKCI	CYCGRG	1 cut(s)	1226
BsiSI	CCGG	2 cut(s)	1990, 2061
BslI	CCNNNNNNNGG	3 cut(s)	431, 664, 1603
BsmAI	GTCTC	2 cut(s)	259, 2051
BsmI	GAATGC	1 cut(s)	1490
BsnI	GGCC	5 cut(s)	86, 396, 906, 977, 2026
BsoBI	CYCGRG	1 cut(s)	1226
Bsp1286I	GDGCHC	3 cut(s)	1333, 1516, 2137
Bsp13I	TCCGGA	1 cut(s)	2060
Bsp143I	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
Bsp68I	TCGCGA	1 cut(s)	131
BspACI	CCGC	3 cut(s)	92, 101, 2139
BspANI	GGCC	5 cut(s)	86, 396, 906, 977, 2026
BspCNI	CTCAG	6 cut(s)	595, 655, 739, 978, 1160, 2121
BspDI	ATCGAT	1 cut(s)	540
BspEI	TCCGGA	1 cut(s)	2060
BspFNI	CGCG	1 cut(s)	131
BspHI	TCATGA	1 cut(s)	1312
BspLI	GGNNCC	3 cut(s)	359, 655, 885
BspT107I	GGYRCC	2 cut(s)	357, 883
BsrDI	GCAATG	5 cut(s)	175, 597, 1121, 1953, 2118
BsrI	ACTGG	1 cut(s)	169
BssECI	CCNNGG	5 cut(s)	21, 81, 452, 617, 1990
BssMI	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
BssT1I	CCWWGG	4 cut(s)	21, 81, 452, 617
Bst2UI	CCWGG	4 cut(s)	426, 703, 1833, 2018
Bst4CI	ACNGT	3 cut(s)	782, 1423, 1721
Bst6I	CTCTTC	3 cut(s)	636, 1368, 1889
BstAPI	GCANNNNNTGC	1 cut(s)	371
BstBAI	YACGTR	2 cut(s)	671, 2168
BstC8I	GCNNGC	5 cut(s)	398, 739, 1615, 1766, 1841
BstDEI	CTNAG	8 cut(s)	603, 663, 726, 879, 986, 1147, 2028, 2129
BstEII	GGTNACC	1 cut(s)	16
BstENI	CCTNNNNNAGG	1 cut(s)	662
BstF5I	GGATG	6 cut(s)	238, 763, 1268, 1546, 1977, 2147
BstFNI	CGCG	1 cut(s)	131
BstHHI	GCGC	2 cut(s)	612, 627
BstKTI	GATC	8 cut(s)	54, 1318, 1414, 1669, 1682, 1698, 1704, 1780
BstMAI	GTCTC	2 cut(s)	259, 2051
BstMBI	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
BstMCI	CGRYCG	1 cut(s)	1425
BstMWI	GCNNNNNNNGC	3 cut(s)	371, 463, 869
BstNI	CCWGG	4 cut(s)	426, 703, 1833, 2018
BstNSI	RCATGY	4 cut(s)	724, 741, 923, 1908
BstPI	GGTNACC	1 cut(s)	16
BstSCI	CCNGG	5 cut(s)	424, 701, 1831, 1989, 2016
BstSLI	GKGCMC	2 cut(s)	1516, 2137
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	2 cut(s)	295, 361
BstV2I	GAAGAC	3 cut(s)	440, 713, 1394
BstX2I	RGATCY	2 cut(s)	1679, 1695
BstYI	RGATCY	2 cut(s)	1679, 1695
Bsu15I	ATCGAT	1 cut(s)	540
BsuI	GTATCC	1 cut(s)	770
BsuRI	GGCC	5 cut(s)	86, 396, 906, 977, 2026
BsuTUI	ATCGAT	1 cut(s)	540
BtsCI	GGATG	6 cut(s)	238, 763, 1268, 1546, 1977, 2147
BtsI	GCAGTG	1 cut(s)	1246
BtsIMutI	CAGTG	3 cut(s)	787, 1246, 2126
BtuMI	TCGCGA	1 cut(s)	131
Cac8I	GCNNGC	5 cut(s)	398, 739, 1615, 1766, 1841
CciI	TCATGA	1 cut(s)	1312
CfoI	GCGC	2 cut(s)	612, 627
Cfr13I	GGNCC	5 cut(s)	976, 1589, 1945, 2024, 2058
ClaI	ATCGAT	1 cut(s)	540
CsiI	ACCWGGT	1 cut(s)	2016
Csp6I	GTAC	2 cut(s)	884, 1376
CviQI	GTAC	2 cut(s)	884, 1376
DdeI	CTNAG	8 cut(s)	603, 663, 726, 879, 986, 1147, 2028, 2129
DpnI	GATC	8 cut(s)	53, 1317, 1413, 1668, 1681, 1697, 1703, 1779
DpnII	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
DraIII	CACNNNGTG	2 cut(s)	1511, 2132
EaeI	YGGCCR	1 cut(s)	84
Eam1104I	CTCTTC	3 cut(s)	636, 1368, 1889
EarI	CTCTTC	3 cut(s)	636, 1368, 1889
Eco130I	CCWWGG	4 cut(s)	21, 81, 452, 617
Eco24I	GRGCYC	1 cut(s)	1333
Eco32I	GATATC	1 cut(s)	199
Eco47I	GGWCC	3 cut(s)	1589, 1945, 2058
Eco57I	CTGAAG	2 cut(s)	534, 1586
Eco72I	CACGTG	1 cut(s)	671
Eco88I	CYCGRG	1 cut(s)	1226
Eco91I	GGTNACC	1 cut(s)	16
EcoNI	CCTNNNNNAGG	1 cut(s)	662
EcoO65I	GGTNACC	1 cut(s)	16
EcoRII	CCWGG	4 cut(s)	424, 701, 1831, 2016
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	4 cut(s)	21, 81, 452, 617
EcoT38I	GRGCYC	1 cut(s)	1333
ErhI	CCWWGG	4 cut(s)	21, 81, 452, 617
FalI	AAGNNNNNCTT	5 cut(s)	37, 1392, 1424, 1854, 1886
FauI	CCCGC	2 cut(s)	94, 2146
FbaI	TGATCA	2 cut(s)	51, 1701
Fnu4HI	GCNGC	2 cut(s)	309, 375
FokI	GGATG	6 cut(s)	245, 770, 1255, 1553, 1984, 2134
FriOI	GRGCYC	1 cut(s)	1333
Fsp4HI	GCNGC	2 cut(s)	309, 375
FspBI	CTAG	3 cut(s)	690, 1809, 1916
GlaI	GCGC	2 cut(s)	611, 626
GluI	GCNGC	2 cut(s)	309, 375
GsuI	CTGGAG	1 cut(s)	1016
HaeIII	GGCC	5 cut(s)	86, 396, 906, 977, 2026
HapII	CCGG	2 cut(s)	1990, 2061
HhaI	GCGC	2 cut(s)	612, 627
Hin6I	GCGC	2 cut(s)	610, 625
HinP1I	GCGC	2 cut(s)	610, 625
HincII	GTYRAC	5 cut(s)	76, 274, 408, 1018, 1092
HindII	GTYRAC	5 cut(s)	76, 274, 408, 1018, 1092
HindIII	AAGCTT	2 cut(s)	527, 647
HinfI	GANTC	2 cut(s)	287, 1805
HpaI	GTTAAC	1 cut(s)	274
HpaII	CCGG	2 cut(s)	1990, 2061
HphI	GGTGA	4 cut(s)	10, 46, 1232, 1906
Hpy166II	GTNNAC	9 cut(s)	76, 220, 274, 408, 1018, 1092, 1223, 1514, 2135
Hpy8I	GTNNAC	9 cut(s)	76, 220, 274, 408, 1018, 1092, 1223, 1514, 2135
Hpy99I	CGWCG	2 cut(s)	41, 125
HpyCH4III	ACNGT	3 cut(s)	782, 1423, 1721
HpyCH4IV	ACGT	4 cut(s)	445, 670, 868, 2167
HpyF10VI	GCNNNNNNNGC	3 cut(s)	371, 463, 869
HpyF3I	CTNAG	8 cut(s)	603, 663, 726, 879, 986, 1147, 2028, 2129
HpySE526I	ACGT	4 cut(s)	445, 670, 868, 2167
HspAI	GCGC	2 cut(s)	610, 625
Kpn2I	TCCGGA	1 cut(s)	2060
KpnI	GGTACC	1 cut(s)	887
Ksp22I	TGATCA	2 cut(s)	51, 1701
KspAI	GTTAAC	1 cut(s)	274
Kzo9I	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
LmnI	GCTCC	2 cut(s)	382, 718
Lsp1109I	GCAGC	2 cut(s)	295, 361
LweI	GCATC	5 cut(s)	477, 532, 1347, 1949, 1967
MabI	ACCWGGT	1 cut(s)	2016
MaeI	CTAG	3 cut(s)	690, 1809, 1916
MaeII	ACGT	4 cut(s)	445, 670, 868, 2167
MaeIII	GTNAC	8 cut(s)	16, 892, 1075, 1460, 1816, 1852, 2072, 2163
MalI	GATC	8 cut(s)	53, 1317, 1413, 1668, 1681, 1697, 1703, 1779
MboI	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
MflI	RGATCY	2 cut(s)	1679, 1695
MhlI	GDGCHC	3 cut(s)	1333, 1516, 2137
MlsI	TGGCCA	1 cut(s)	86
MluNI	TGGCCA	1 cut(s)	86
MmeI	TCCRAC	2 cut(s)	1405, 1618
Mox20I	TGGCCA	1 cut(s)	86
MroI	TCCGGA	1 cut(s)	2060
MroXI	GAANNNNTTC	1 cut(s)	181
MscI	TGGCCA	1 cut(s)	86
MseI	TTAA	6 cut(s)	63, 273, 810, 909, 1065, 1128
MslI	CAYNNNNRTG	1 cut(s)	355
Msp20I	TGGCCA	1 cut(s)	86
MspI	CCGG	2 cut(s)	1990, 2061
MspR9I	CCNGG	5 cut(s)	426, 703, 1833, 1991, 2018
Mva1269I	GAATGC	1 cut(s)	1490
MvaI	CCWGG	4 cut(s)	426, 703, 1833, 2018
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	3 cut(s)	371, 463, 869
NciI	CCSGG	1 cut(s)	1991
NdeII	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
NlaIV	GGNNCC	3 cut(s)	359, 655, 885
NmuCI	GTSAC	2 cut(s)	16, 2163
NruI	TCGCGA	1 cut(s)	131
NspI	RCATGY	4 cut(s)	724, 741, 923, 1908
PaeI	GCATGC	1 cut(s)	741
PaeR7I	CTCGAG	1 cut(s)	1226
PagI	TCATGA	1 cut(s)	1312
PciI	ACATGT	1 cut(s)	919
PcsI	WCGNNNNNNNCGW	1 cut(s)	1224
PctI	GAATGC	1 cut(s)	1490
PdmI	GAANNNNTTC	1 cut(s)	181
PfeI	GAWTC	2 cut(s)	287, 1805
PflFI	GACNNNGTC	2 cut(s)	125, 1559
PflMI	CCANNNNNTGG	1 cut(s)	431
PfoI	TCCNGGA	1 cut(s)	424
PkrI	GCNGC	2 cut(s)	310, 376
PmaCI	CACGTG	1 cut(s)	671
PmlI	CACGTG	1 cut(s)	671
Ppu21I	YACGTR	2 cut(s)	671, 2168
PscI	ACATGT	1 cut(s)	919
Psp6I	CCWGG	4 cut(s)	424, 701, 1831, 2016
PspCI	CACGTG	1 cut(s)	671
PspEI	GGTNACC	1 cut(s)	16
PspGI	CCWGG	4 cut(s)	424, 701, 1831, 2016
PspN4I	GGNNCC	3 cut(s)	359, 655, 885
PspPI	GGNCC	5 cut(s)	976, 1589, 1945, 2024, 2058
PsuI	RGATCY	2 cut(s)	1679, 1695
PsyI	GACNNNGTC	2 cut(s)	125, 1559
RruI	TCGCGA	1 cut(s)	131
RsaI	GTAC	2 cut(s)	885, 1377
RsaNI	GTAC	2 cut(s)	884, 1376
RseI	CAYNNNNRTG	1 cut(s)	355
SaqAI	TTAA	6 cut(s)	63, 273, 810, 909, 1065, 1128
SatI	GCNGC	2 cut(s)	309, 375
Sau3AI	GATC	8 cut(s)	51, 1315, 1411, 1666, 1679, 1695, 1701, 1777
Sau96I	GGNCC	5 cut(s)	976, 1589, 1945, 2024, 2058
ScrFI	CCNGG	5 cut(s)	426, 703, 1833, 1991, 2018
SduI	GDGCHC	3 cut(s)	1333, 1516, 2137
SexAI	ACCWGGT	1 cut(s)	2016
SfaNI	GCATC	5 cut(s)	477, 532, 1347, 1949, 1967
Sfr274I	CTCGAG	1 cut(s)	1226
SinI	GGWCC	3 cut(s)	1589, 1945, 2058
SlaI	CTCGAG	1 cut(s)	1226
SmiMI	CAYNNNNRTG	1 cut(s)	355
SmlI	CTYRAG	5 cut(s)	558, 1007, 1226, 1871, 2048
SmoI	CTYRAG	5 cut(s)	558, 1007, 1226, 1871, 2048
SphI	GCATGC	1 cut(s)	741
SsiI	CCGC	3 cut(s)	92, 101, 2139
SspI	AATATT	1 cut(s)	1825
SspMI	CTAG	3 cut(s)	690, 1809, 1916
StyD4I	CCNGG	5 cut(s)	424, 701, 1831, 1989, 2016
StyI	CCWWGG	4 cut(s)	21, 81, 452, 617
TaaI	ACNGT	3 cut(s)	782, 1423, 1721
TaiI	ACGT	4 cut(s)	448, 673, 871, 2170
TaqI	TCGA	8 cut(s)	120, 210, 540, 744, 1227, 1486, 1936, 2090
TfiI	GAWTC	2 cut(s)	287, 1805
Tru1I	TTAA	6 cut(s)	63, 273, 810, 909, 1065, 1128
Tru9I	TTAA	6 cut(s)	63, 273, 810, 909, 1065, 1128
TscAI	CASTG	3 cut(s)	787, 1253, 2133
TseFI	GTSAC	2 cut(s)	16, 2163
TseI	GCWGC	2 cut(s)	308, 374
Tsp45I	GTSAC	2 cut(s)	16, 2163
TspDTI	ATGAA	4 cut(s)	758, 1767, 1935, 2129
TspRI	CASTG	3 cut(s)	787, 1253, 2133
Tth111I	GACNNNGTC	2 cut(s)	125, 1559
Van91I	CCANNNNNTGG	1 cut(s)	431
VneI	GTGCAC	2 cut(s)	1512, 2133
VpaK11BI	GGWCC	3 cut(s)	1589, 1945, 2058
XagI	CCTNNNNNAGG	1 cut(s)	662
XapI	RAATTY	5 cut(s)	263, 804, 1212, 1646, 1866
XbaI	TCTAGA	2 cut(s)	1808, 1915
XceI	RCATGY	4 cut(s)	724, 741, 923, 1908
XhoI	CTCGAG	1 cut(s)	1226
XmnI	GAANNNNTTC	1 cut(s)	181
XspI	CTAG	3 cut(s)	690, 1809, 1916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.