Rh2CG050900
NAC Family

proteinaceous RNase P 1, chloroplastic mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002433
Physical Location & Seq
Forward (+)
4013408 .. 4016884
3477 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG050900.1

Sequence Viewer

Length: 2448 bp
ATGGCCTCCTTCACCTCCCCCAACTCAGTACTGCAGCAAAAGCACCACCCCCTTCTTCACTCCATCACCACCCTCTGTAAGTACCCATCTCCTCTCAACGTTTTTGAATTCCACTGCCCCTCTCATTTCTTCACTTTCTCACCTCCCAAGCAAACACTTCAACTCAAACACGCACTAAAACTCTATCCACTTCCACTAGCTAGAGAGAATATCAACCACATAGTTGCAAAGTTTTCCACCTCCACCACCACGTACCATGAACCACACACAAAGACCCTGAACTCAGCAACTGAAAAACCTGTAAAGAACAATGGCAGTTCAGTTGTGGAGAAAAAGAGTGAAGCTAGGTTCACTAAAGAGAAAAGTACAAAGAAAAGTAGAAGGAAGGAGGGTATGTGGTTTAAAGATAAGAGTAAGGAAAGAAAGAAGAGAGGTAGTGATAGTGATCAGGTGGGAGAAGAGAAAAAGGGGAGAGGGTCTAAGAAAAACAAGGTTAATGTAGACTTGCCTGAAGTTAAGATGAGAGTTGGATTGGATATGTGCTCAAAGAGAGGGGATGTAATGGGTGCAATTAAGTACTATGATTTGGCTCAAACTGAGCAGATTAAGTTGGATCAGTATCATTATACTGTTCTGTTGTATCTGTGCTCTTCTGCAGCTGTTGGTGTTGTTCGTCCTGCTAAGAGTGGGTCTGGGACTCGAGTTTTGGATACCCTGGATTCGTCCGGTGAAGGAACTGGGGTGGAAACAATGGAGTTGACTAAGTTAAGAGATTCGGGTATTGGGAATTGGGATGATAACAGTGGAAGTGATGAGAGTGCTGAAAAAATGGAGTTGAGTTCAAGGAACAGGTTTGATGATGATGTGGATGGTGCTTCCAATGAAAAGAGGAACTTAGCGTGGTTTTCTAATGGATTTGTGAAGCGAAACTCTCGCCTGTTAGATGGACTGAACAATCCTACCAAAGTTGGAGATGATGGTACAAGTCTAAAAGATGGAAATGTGAAGCAAGAAAGCAATGAGATTCGGGTTAGTGAGGATGTGAAGAAGTATGCACTCCAAAGGGGATTTGAGATTTATGAGAAGATGTGTTTGGATGGTGTCCCAGTGAATGAAGCAGCATTGACATCTGTGGCTAGAATGGCAATGTCAATGGGGGAGGGAGACATGGCATTTGACATGGTGAAGCAGATGAAATCGATGGGAATAAATCCTAGACTGCGTTCCTACGGTCCTGCGTTATCTGCTTTTTGCAGTAGTGGCAATATTGACAAAGCGTTTGCTGTTGAGAAACACATGTTGGAGCATGGTGTCTATCCAGAAGAGCCTGAACTGGAGGCCCTCTTAAGAGTGAGTGTGGGAGCTGGAAAAGGTGACAAGGTGTATTATATGTTGCAGAAACTAAGAACAAGTGTAAGGAGGGTCTCACCCTCTACTGCTGACTTAATTGTAAAGTGGTTTAATAGCAAGGAAGCGTCGAGAGTGGGAAAGACAAAATGGGACGAAAGATTGATAAGGCAGGCCATTGAAAATGGAGGTGGTGGGTGGCATGGGCAGGGATGGTTGGGGAAAGGAAAGTGGTCAGTGCTACATACAACTATTGGATCCGATGGCTTGTGCAAATGCTGTGGGGGAAAATTGGCCACAATTGATCTTGATCCTGTAGAAACAGAAAACTTTGCTGAATCAGTTGCATCTATAGCTATACAGAGAGAGAGAAATTCAAGCTTTCAGAAATTTCAAAAATGGCTCGATTATTATGGACGTTTTGAAGCAGTGGTGGATGGAGCTAATGTAGGTCTTTTCAGCCAGAAGAAATTCATCACAGCCAAGGTCAATGCTGTTGTTAATGGCATACGCCAGAAGCTTCCTTCAAAGAGATGGCCACTCATTGTTCTTCATAATAGGCGTATCACTGGAGGCAGAATGGATGAACGGGTGAATAAGGCGTTGATTGAGAAGTGGCAAAATGCTGATGCTCTCTATGCAACGCCTACTGGGTCAAATGATGATTGGTCAGTGCACTTCAGTTTCTCTGAAGGTGGTCCAGTGTTTCATATGCCTCCTCCTTGTTCTGTTGTAATTCAGGAATCAGAGGAAGGGCACTGGCACATTCCAGTGGTGTCAGAACATGGTTATGAAGCTGAAAGAATGTGGTTATGCATTATGCGAGCTAAATCGCGTGAGGCAAGGAAGGATTCTGCAACCAGACCTGAAGATGCAGAACCTCAAAACAAGGGATTTGCTAGGTCAGCTACCAGAACTGGCATTGAGTCACAACCGTTGAAAATTGCGAACCACAAATATACTAAACACCGACCCCAGGAAATTCTCAAGAATCTCAAAGATATTCTATCAGGTTCCACAATCTCGAATCATCGTTCCATAATACCAGAAATTGAGACTGCAGAGAAGATTGGTGGATGTACCATTGACTTTCAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
PPR_long PRORP

Protein Analysis

815

Amino Acids

91.1

Weight (kDa)

9.16

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 162 - 225 1.1e-13 Pentacotripeptide-repeat region of PRORP
PPR_long PF17177 348 - 493 1.6e-52 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 374 - 485 2.6e-07 Fungal tetratrico peptide repeats
PRORP PF16953 534 - 672 1.2e-37 Protein-only RNase P
PRORP PF16953 678 - 721 1.1e-09 Protein-only RNase P
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 501
AccII CGCG 1 cut(s) 2182
AclI AACGTT 1 cut(s) 99
AclWI GGATC 4 cut(s) 621, 1599, 1612, 1652
AcoI YGGCCR 2 cut(s) 1641, 1883
AcsI RAATTY 5 cut(s) 107, 1720, 1736, 1817, 2328
AcuI CTGAAG 4 cut(s) 531, 2011, 2058, 2235
AfaI GTAC 7 cut(s) 30, 83, 254, 367, 578, 982, 2428
AfiI CCNNNNNNNGG 1 cut(s) 2323
AflII CTTAAG 1 cut(s) 1345
AflIII ACRYGT 1 cut(s) 1296
AjnI CCWGG 2 cut(s) 714, 2322
AjuI GAANNNNNNNTTGG 4 cut(s) 1076, 1108, 1283, 1315
Alw21I GWGCWC 3 cut(s) 545, 650, 2025
Alw26I GTCTC 3 cut(s) 1158, 1429, 2396
Alw44I GTGCAC 1 cut(s) 2021
AlwI GGATC 4 cut(s) 621, 1599, 1612, 1652
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 1 cut(s) 699
AoxI GGCC 5 cut(s) 3, 1338, 1521, 1641, 1883
ApaLI GTGCAC 1 cut(s) 2021
ApeKI GCWGC 3 cut(s) 34, 656, 1118
ApoI RAATTY 5 cut(s) 107, 1720, 1736, 1817, 2328
ArsI GACNNNNNNTTYG 6 cut(s) 688, 720, 1157, 1189, 1262, 1294
Asp700I GAANNNNTTC 1 cut(s) 1817
AspS9I GGNCC 3 cut(s) 1232, 1339, 2045
AsuHPI GGTGA 8 cut(s) 4, 58, 132, 740, 1195, 1385, 1419, 1951
AvaI CYCGRG 1 cut(s) 699
AvaII GGWCC 2 cut(s) 1232, 2045
BaeGI GKGCMC 2 cut(s) 2025, 2106
BalI TGGCCA 2 cut(s) 1643, 1885
BamHI GGATCC 1 cut(s) 1604
Bbv12I GWGCWC 3 cut(s) 545, 650, 2025
BbvI GCAGC 3 cut(s) 46, 668, 1130
BciT130I CCWGG 2 cut(s) 716, 2324
BciVI GTATCC 1 cut(s) 703
BclI TGATCA 1 cut(s) 445
BcoDI GTCTC 3 cut(s) 1158, 1429, 2396
BfaI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2247
BfmI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2406
BfrI CTTAAG 1 cut(s) 1345
BfuI GTATCC 1 cut(s) 703
BisI GCNGC 3 cut(s) 35, 657, 1119
BlsI GCNGC 3 cut(s) 36, 658, 1120
BmcAI AGTACT 2 cut(s) 30, 578
Bme1390I CCNGG 2 cut(s) 716, 2324
Bme18I GGWCC 2 cut(s) 1232, 2045
BmeT110I CYCGRG 1 cut(s) 699
BmgT120I GGNCC 3 cut(s) 1232, 1339, 2045
BmiI GGNNCC 2 cut(s) 1606, 2362
BmrFI CCNGG 2 cut(s) 716, 2324
BmrI ACTGGG 3 cut(s) 747, 1100, 2007
BmsI GCATC 3 cut(s) 1703, 1966, 2209
BmuI ACTGGG 3 cut(s) 747, 1100, 2007
BpmI CTGGAG 2 cut(s) 1355, 1938
BpuEI CTTGAG 1 cut(s) 2318
Bsa29I ATCGAT 1 cut(s) 1199
BsaAI YACGTR 1 cut(s) 252
BsaBI GATNNNNATC 3 cut(s) 444, 618, 1656
BsaI GGTCTC 1 cut(s) 1429
BsaJI CCNNGG 3 cut(s) 714, 1830, 2322
BsaWI WCCGGW 1 cut(s) 725
BsaXI ACNNNNNCTCC 4 cut(s) 380, 410, 1779, 1809
Bsc4I CCNNNNNNNGG 1 cut(s) 2323
Bse1I ACTGG 9 cut(s) 742, 1106, 1338, 1921, 2002, 2048, 2111, 2117, 2269
Bse3DI GCAATG 2 cut(s) 1024, 1152
Bse8I GATNNNNATC 3 cut(s) 444, 618, 1656
BseBI CCWGG 2 cut(s) 716, 2324
BseCI ATCGAT 1 cut(s) 1199
BseDI CCNNGG 3 cut(s) 714, 1830, 2322
BseGI GGATG 9 cut(s) 562, 799, 874, 1045, 1102, 1565, 1789, 1936, 2429
BseJI GATNNNNATC 3 cut(s) 444, 618, 1656
BseLI CCNNNNNNNGG 1 cut(s) 2323
BseMI GCAATG 2 cut(s) 1024, 1152
BseMII CTCAG 3 cut(s) 39, 297, 588
BseNI ACTGG 9 cut(s) 742, 1106, 1338, 1921, 2002, 2048, 2111, 2117, 2269
BseRI GAGGAG 2 cut(s) 81, 2055
BseSI GKGCMC 2 cut(s) 2025, 2106
BseXI GCAGC 3 cut(s) 46, 668, 1130
Bsh1236I CGCG 1 cut(s) 2182
BshFI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BshVI ATCGAT 1 cut(s) 1199
BsiHKAI GWGCWC 3 cut(s) 545, 650, 2025
BsiHKCI CYCGRG 1 cut(s) 699
BsiSI CCGG 1 cut(s) 726
BslFI GGGAC 3 cut(s) 709, 1088, 1514
BslI CCNNNNNNNGG 1 cut(s) 2323
BsmAI GTCTC 3 cut(s) 1158, 1429, 2396
BsmFI GGGAC 3 cut(s) 709, 1088, 1514
BsnI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
Bso31I GGTCTC 1 cut(s) 1429
BsoBI CYCGRG 1 cut(s) 699
Bsp1286I GDGCHC 4 cut(s) 545, 650, 2025, 2106
Bsp143I GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BspANI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BspCNI CTCAG 3 cut(s) 38, 296, 589
BspDI ATCGAT 1 cut(s) 1199
BspFNI CGCG 1 cut(s) 2182
BspLI GGNNCC 2 cut(s) 1606, 2362
BspMAI CTGCAG 3 cut(s) 36, 658, 2410
BspPI GGATC 4 cut(s) 621, 1599, 1612, 1652
BspQI GCTCTTC 2 cut(s) 655, 1317
BspTI CTTAAG 1 cut(s) 1345
BspTNI GGTCTC 1 cut(s) 1429
BsrDI GCAATG 2 cut(s) 1024, 1152
BsrI ACTGG 9 cut(s) 742, 1106, 1338, 1921, 2002, 2048, 2111, 2117, 2269
BssECI CCNNGG 3 cut(s) 714, 1830, 2322
BssMI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BssT1I CCWWGG 1 cut(s) 1830
Bst2UI CCWGG 2 cut(s) 716, 2324
Bst4CI ACNGT 4 cut(s) 631, 803, 1232, 2283
Bst6I CTCTTC 4 cut(s) 422, 453, 655, 1317
BstAFI CTTAAG 1 cut(s) 1345
BstBAI YACGTR 1 cut(s) 252
BstC8I GCNNGC 2 cut(s) 1521, 2172
BstDEI CTNAG 8 cut(s) 25, 283, 480, 597, 681, 762, 895, 1403
BstF5I GGATG 9 cut(s) 562, 799, 874, 1045, 1102, 1565, 1789, 1936, 2429
BstFNI CGCG 1 cut(s) 2182
BstKTI GATC 5 cut(s) 448, 616, 1607, 1654, 1660
BstMAI GTCTC 3 cut(s) 1158, 1429, 2396
BstMBI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BstMWI GCNNNNNNNGC 7 cut(s) 40, 1142, 1244, 1260, 1700, 1985, 2252
BstNI CCWGG 2 cut(s) 716, 2324
BstNSI RCATGY 1 cut(s) 1300
BstSCI CCNGG 2 cut(s) 714, 2322
BstSFI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2406
BstSLI GKGCMC 2 cut(s) 2025, 2106
BstUI CGCG 1 cut(s) 2182
BstV1I GCAGC 3 cut(s) 46, 668, 1130
BstX2I RGATCY 1 cut(s) 1604
BstYI RGATCY 1 cut(s) 1604
Bsu15I ATCGAT 1 cut(s) 1199
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BsuTUI ATCGAT 1 cut(s) 1199
BtsCI GGATG 9 cut(s) 562, 799, 874, 1045, 1102, 1565, 1789, 1936, 2429
BtsI GCAGTG 2 cut(s) 112, 1782
Cac8I GCNNGC 2 cut(s) 1521, 2172
CaiI CAGNNNCTG 1 cut(s) 290
Cfr13I GGNCC 3 cut(s) 1232, 1339, 2045
ClaI ATCGAT 1 cut(s) 1199
CseI GACGC 1 cut(s) 1464
Csp6I GTAC 7 cut(s) 29, 82, 253, 366, 577, 981, 2427
CspCI CAANNNNNGTGG 2 cut(s) 1609, 1644
CviAII CATG 7 cut(s) 257, 1168, 1180, 1297, 1307, 1550, 2132
CviQI GTAC 7 cut(s) 29, 82, 253, 366, 577, 981, 2427
DdeI CTNAG 8 cut(s) 25, 283, 480, 597, 681, 762, 895, 1403
DpnI GATC 5 cut(s) 447, 615, 1606, 1653, 1659
DpnII GATC 5 cut(s) 445, 613, 1604, 1651, 1657
DraI TTTAAA 1 cut(s) 403
EaeI YGGCCR 2 cut(s) 1641, 1883
Eam1104I CTCTTC 4 cut(s) 422, 453, 655, 1317
EarI CTCTTC 4 cut(s) 422, 453, 655, 1317
Eco130I CCWWGG 1 cut(s) 1830
Eco31I GGTCTC 1 cut(s) 1429
Eco47I GGWCC 2 cut(s) 1232, 2045
Eco57I CTGAAG 4 cut(s) 531, 2011, 2058, 2235
Eco88I CYCGRG 1 cut(s) 699
EcoO109I RGGNCCY 1 cut(s) 1339
EcoRI GAATTC 1 cut(s) 107
EcoRII CCWGG 2 cut(s) 714, 2322
EcoT14I CCWWGG 1 cut(s) 1830
EcoT22I ATGCAT 1 cut(s) 2165
ErhI CCWWGG 1 cut(s) 1830
FaeI CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2135
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FaqI GGGAC 3 cut(s) 709, 1088, 1514
FatI CATG 7 cut(s) 256, 1167, 1179, 1296, 1306, 1549, 2131
FauNDI CATATG 1 cut(s) 2058
FbaI TGATCA 1 cut(s) 445
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 3 cut(s) 35, 657, 1119
FokI GGATG 9 cut(s) 569, 806, 881, 1052, 1109, 1572, 1796, 1943, 2436
Fsp4HI GCNGC 3 cut(s) 35, 657, 1119
FspBI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2247
GluI GCNGC 3 cut(s) 35, 657, 1119
GsuI CTGGAG 2 cut(s) 1355, 1938
HaeIII GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
HapII CCGG 1 cut(s) 726
HgaI GACGC 1 cut(s) 1464
Hin1II CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2135
HincII GTYRAC 1 cut(s) 759
HindII GTYRAC 1 cut(s) 759
HindIII AAGCTT 2 cut(s) 1726, 1865
HpaII CCGG 1 cut(s) 726
HphI GGTGA 8 cut(s) 4, 58, 132, 740, 1195, 1385, 1419, 1951
Hpy166II GTNNAC 4 cut(s) 351, 502, 759, 2023
Hpy188I TCNGA 5 cut(s) 1609, 1734, 2038, 2095, 2128
Hpy188III TCNNGA 6 cut(s) 1319, 1479, 1655, 2087, 2335, 2371
Hpy8I GTNNAC 4 cut(s) 351, 502, 759, 2023
Hpy99I CGWCG 1 cut(s) 1480
HpyAV CCTTC 9 cut(s) 19, 62, 375, 379, 725, 1881, 2033, 2093, 2188
HpyCH4III ACNGT 4 cut(s) 631, 803, 1232, 2283
HpyCH4IV ACGT 3 cut(s) 99, 251, 1765
HpyF10VI GCNNNNNNNGC 7 cut(s) 40, 1142, 1244, 1260, 1700, 1985, 2252
HpyF3I CTNAG 8 cut(s) 25, 283, 480, 597, 681, 762, 895, 1403
HpySE526I ACGT 3 cut(s) 99, 251, 1765
Hsp92II CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2135
Ksp22I TGATCA 1 cut(s) 445
Kzo9I GATC 5 cut(s) 445, 613, 1604, 1651, 1657
LguI GCTCTTC 2 cut(s) 655, 1317
LmnI GCTCC 3 cut(s) 1303, 1361, 1787
Lsp1109I GCAGC 3 cut(s) 46, 668, 1130
LweI GCATC 3 cut(s) 1703, 1966, 2209
MaeI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2247
MaeII ACGT 3 cut(s) 99, 251, 1765
MaeIII GTNAC 2 cut(s) 1373, 2274
MalI GATC 5 cut(s) 447, 615, 1606, 1653, 1659
MboI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
MfeI CAATTG 1 cut(s) 1647
MflI RGATCY 1 cut(s) 1604
MhlI GDGCHC 4 cut(s) 545, 650, 2025, 2106
MlsI TGGCCA 2 cut(s) 1643, 1885
MluNI TGGCCA 2 cut(s) 1643, 1885
MlyI GAGTC 2 cut(s) 691, 2282
MmeI TCCRAC 4 cut(s) 508, 591, 949, 1281
Mox20I TGGCCA 2 cut(s) 1643, 1885
Mph1103I ATGCAT 1 cut(s) 2165
MroXI GAANNNNTTC 1 cut(s) 1817
MscI TGGCCA 2 cut(s) 1643, 1885
MslI CAYNNNNRTG 2 cut(s) 2117, 2136
Msp20I TGGCCA 2 cut(s) 1643, 1885
MspA1I CMGCKG 1 cut(s) 659
MspCI CTTAAG 1 cut(s) 1345
MspI CCGG 1 cut(s) 726
MspR9I CCNGG 2 cut(s) 716, 2324
MunI CAATTG 1 cut(s) 1647
MvaI CCWGG 2 cut(s) 716, 2324
MvnI CGCG 1 cut(s) 2182
MwoI GCNNNNNNNGC 7 cut(s) 40, 1142, 1244, 1260, 1700, 1985, 2252
NdeI CATATG 1 cut(s) 2058
NdeII GATC 5 cut(s) 445, 613, 1604, 1651, 1657
NlaIII CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2135
NlaIV GGNNCC 2 cut(s) 1606, 2362
NmuCI GTSAC 2 cut(s) 1373, 2274
NsiI ATGCAT 1 cut(s) 2165
NspI RCATGY 1 cut(s) 1300
PaeR7I CTCGAG 1 cut(s) 699
PciI ACATGT 1 cut(s) 1296
PciSI GCTCTTC 2 cut(s) 655, 1317
PdmI GAANNNNTTC 1 cut(s) 1817
PfeI GAWTC 8 cut(s) 719, 773, 1024, 1685, 2090, 2198, 2338, 2374
PkrI GCNGC 3 cut(s) 36, 658, 1120
PleI GAGTC 2 cut(s) 691, 2281
PpsI GAGTC 2 cut(s) 691, 2281
Ppu21I YACGTR 1 cut(s) 252
PscI ACATGT 1 cut(s) 1296
Psp1406I AACGTT 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 714, 2322
PspGI CCWGG 2 cut(s) 714, 2322
PspN4I GGNNCC 2 cut(s) 1606, 2362
PspPI GGNCC 3 cut(s) 1232, 1339, 2045
PspXI VCTCGAGB 1 cut(s) 699
PstI CTGCAG 3 cut(s) 36, 658, 2410
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 1 cut(s) 1604
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 7 cut(s) 30, 83, 254, 367, 578, 982, 2428
RsaNI GTAC 7 cut(s) 29, 82, 253, 366, 577, 981, 2427
RseI CAYNNNNRTG 2 cut(s) 2117, 2136
SapI GCTCTTC 2 cut(s) 655, 1317
SatI GCNGC 3 cut(s) 35, 657, 1119
Sau3AI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
Sau96I GGNCC 3 cut(s) 1232, 1339, 2045
ScaI AGTACT 2 cut(s) 30, 578
SchI GAGTC 2 cut(s) 691, 2282
ScrFI CCNGG 2 cut(s) 716, 2324
SduI GDGCHC 4 cut(s) 545, 650, 2025, 2106
SfaNI GCATC 3 cut(s) 1703, 1966, 2209
SfcI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2406
Sfr274I CTCGAG 1 cut(s) 699
SinI GGWCC 2 cut(s) 1232, 2045
SlaI CTCGAG 1 cut(s) 699
SmiMI CAYNNNNRTG 2 cut(s) 2117, 2136
SmlI CTYRAG 3 cut(s) 699, 1345, 2333
SmoI CTYRAG 3 cut(s) 699, 1345, 2333
SspI AATATT 1 cut(s) 1267
SspMI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2247
StyD4I CCNGG 2 cut(s) 714, 2322
StyI CCWWGG 1 cut(s) 1830
TaaI ACNGT 4 cut(s) 631, 803, 1232, 2283
TaiI ACGT 3 cut(s) 102, 254, 1768
TaqI TCGA 5 cut(s) 700, 1199, 1478, 1752, 2372
TatI WGTACW 3 cut(s) 28, 365, 576
TfiI GAWTC 8 cut(s) 719, 773, 1024, 1685, 2090, 2198, 2338, 2374
TseFI GTSAC 2 cut(s) 1373, 2274
TseI GCWGC 3 cut(s) 34, 656, 1118
Tsp45I GTSAC 2 cut(s) 1373, 2274
TspDTI ATGAA 9 cut(s) 273, 897, 1128, 1208, 1810, 1889, 1947, 2045, 2154
Vha464I CTTAAG 1 cut(s) 1345
VneI GTGCAC 1 cut(s) 2021
VpaK11BI GGWCC 2 cut(s) 1232, 2045
XapI RAATTY 5 cut(s) 107, 1720, 1736, 1817, 2328
XceI RCATGY 1 cut(s) 1300
XhoI CTCGAG 1 cut(s) 699
XmiI GTMKAC 1 cut(s) 501
XmnI GAANNNNTTC 1 cut(s) 1817
XspI CTAG 6 cut(s) 197, 201, 345, 1137, 1215, 2247
ZrmI AGTACT 2 cut(s) 30, 578
Zsp2I ATGCAT 1 cut(s) 2165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.