RchiOBHm_Chr2g0090021
NAC Family

proteinaceous RNase P 1, chloroplastic mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002433
Physical Location & Seq
Forward (+)
4031936 .. 4035751
3816 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46530

Sequence Viewer

Length: 2565 bp
ATGGCCTCCTTCACCTCCCCCAACTCAGTACTGCAGCAAAAGCAGCACCACCTTCTTCACTCCATCACCACCCTCTGTAAGTACCCATCTCCTCTCAACGTTTTTGAATTCCACTGCCCCTCTCATTTCTTCACTTTCTCACCTCCCAAGCAAACACTTCAACTCAAACACGCACTAAAACTCTATCCACTTCCACTCGCTAGAGAGAATATCAACCACATAGTTGCAAAGTTTTCCACCTCCACCACCACGTACCATGAACCACACACAAAGACCCTGAACTCAGCAACTGAAAAACCTGTAAAGAACAATGGCAGTTCAGTTGTGGAGAAAAAGAGTGAAGCTAGGTTCACTAAAGAGAAAAGTACAAAGAAAAGTAGAAGGAAGGAGGGTATGTGGTTTAAAGATAAGAGTAAGGAAAGAAAGAAGAGAGGTAGTGATAGTGATCAGGTGGGAGAAGAGAAAAAGGGGAGAGGGTCTAAGAAAAACAAGGTTAATGTAGACTTGCCTGAAGTTAAGATGAGAGTTGGATTGGATATGTGCTCAAAGAGAGGGGATGTAATGGGTGCAATTAAGTACTATGATTTGGCTCAAACTGAGCAGATTAAGTTGGATCAGTATCATTATACTGTTCTGTTGTATCTGTGCTCTTCTGCAGCTGTTGGTGTTGTTCGTCCTGCTAAGAGTGGGTCTGGGACTCGAGTTTTGGATACCCTGGATTCGTCTGGTGAAGGAACTGGAGTGGAAACAATGGAGTTGACTAAGTTAAGAGATTCGGGTATTGGGAATTGGGATGATAACAGTGGAAGTGATGAGAGTGCTGAAAAAATGGAGTTGAGTTCAAGGAACAGGTTTGATGATGATGTGGATGGTGCTTCCAATGAAAAGAGGAACTTAGCGTGGTTTTCTAATGGATTTGTGAAGCGAAACTCTCGCCTGTTAGATGGACTGAACAATCCTACCAAAGTTGGAGATGATGGTACAAGTCTAAAAGATGGAAATGTGAAGCAAGAAAGCAATGAGATTCGGGTTAGTGAGGATGTGAAGAAGTATGCACTCCAAAGGGGATTTGAGATTTATGAGAAGATGTGTTTGGATGGTGTCCCAGTGAATGAAGCAGCATTGACATCTGTGGCTAGAATGGCAATGTCAATGGGGGAGGGAGACATGGCATTTGACATGGTGAAGCAGATGAAATCGATGGGAATAAATCCTAGACTGCGTTCCTACGGTCCTGCGTTATCTGCTTTTTGCAGTAGTGGCAATATTGACAAAGCGTTTGCTGTTGAGAAACACATGTTGGAGCATGGTGTCTATCCAGAAGAGCCTGAACTGGAGGCCCTCTTAAGAGTGAGTGTGGGAGCTGGAAAAGGTGACAAGGTGTATTATATGTTGCAGAAACTAAGAACAAGTGTAAGGAGGGTCTCACCCTCTACTGCTGACTTAATTGTAAAGTGGTTTAATAGCAAGGAAGCGTCAAGAGTGGGAAAGACAAAATGGGACGAAAGATTGATAAGGCAGGCCATTGAAAATGGGGGTGGTGGGTGGCATGGGCAGGGATGGTTGGGGAAAGGAAAGTGGTCAGTGCTACATACAACTATTGGATCCGATGGCTTGTGCAAATGCTGTGGGGGAAAATTGGCCACAATTGATCTTGATCCTGTAGAAACAGAAAACTTTGCTGAATCAGTTGCATCTATAGCTATACAGAGAGAGAAAAATTCAAGCTTTCAGAAATTTCAAAAATGGCTCGATTATTATGGACCTTTTGAAGCAGTGGTGGATGGAGCTAATGTAGGTCTTTTCAGCCAGAAGAAATTCATCACAGCCAAGGTCAATGCTGTCGTTAATGGCATACGCCAGAAGCTTCCTTCGAAGAGATGGCCACTCATTGTTCTTCATAATAGGCGTATCACTGGAGGCAGAATGGATGAACGGGTGAATAAGGCGTTGATTGAGAAGTGGCAAAATGCTGATGCTCTCTATGCAACGCCTACTGGGTCAAATGATGATTGGTACTGGTTGTATGCTGCAATTAAGTTCAAGTGCTTACTTGTGACAAATGATGAGATGAGAGACCATACATTTCAACTTCTTGGGAATGATTTCTTTCCAAGATGGAAAGAAAGGCATCAAGTGCACTTCAGTTTCTCTGAAGGTGGTCCAGTGTTTCATATGCCTCCTCCTTGTTCTGTTGTAATTCAGGAATCAGAGGAAGGGCACTGGCACATTCCAGTGGTGTCAGAACATGGTTATGAAGCTGAAAGAATGTGGTTATGCATTATGCGAGCTAAATCACGTGAGGCAAGGAAGGATTCTGCAACCAGACCTGAAGATGCAGAACCTCAAAACAAGGGATTTGCTAGGTCAGCTACCAGAACTGGCATTGAGTCACAACCGTTGAAAATTGCGAACCACAAATATACTAAACACCGACCCCAGGAAATTCTAAAGAATCTCAAAGATATTCTATCAGGTTCCACAATCTCGAATCATCGTTCCATAATACCAGAAATTGAGACTGCAGAGAAGATTGGTGGATGTACCATTGACTTTCAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
PPR_long PRORP

Protein Analysis

854

Amino Acids

95.97

Weight (kDa)

9.12

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 162 - 225 1.1e-13 Pentacotripeptide-repeat region of PRORP
PPR_long PF17177 348 - 493 1.7e-52 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 374 - 485 2.8e-07 Fungal tetratrico peptide repeats
PRORP PF16953 534 - 760 1.3e-80 Protein-only RNase P
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 501
AclI AACGTT 1 cut(s) 99
AclWI GGATC 4 cut(s) 621, 1599, 1612, 1652
AcoI YGGCCR 2 cut(s) 1641, 1883
AcsI RAATTY 5 cut(s) 107, 1720, 1736, 1817, 2445
AcuI CTGAAG 4 cut(s) 531, 2128, 2175, 2352
AcvI CACGTG 1 cut(s) 2300
AfaI GTAC 8 cut(s) 30, 83, 254, 367, 578, 982, 2018, 2545
AfiI CCNNNNNNNGG 1 cut(s) 2440
AflII CTTAAG 1 cut(s) 1345
AflIII ACRYGT 1 cut(s) 1296
AjnI CCWGG 2 cut(s) 714, 2439
AjuI GAANNNNNNNTTGG 4 cut(s) 1076, 1108, 1283, 1315
Alw21I GWGCWC 3 cut(s) 545, 650, 2142
Alw26I GTCTC 4 cut(s) 1158, 1429, 2070, 2513
Alw44I GTGCAC 1 cut(s) 2138
AlwI GGATC 4 cut(s) 621, 1599, 1612, 1652
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 1 cut(s) 699
AoxI GGCC 5 cut(s) 3, 1338, 1521, 1641, 1883
ApaLI GTGCAC 1 cut(s) 2138
ApeKI GCWGC 5 cut(s) 34, 43, 656, 1118, 2030
ApoI RAATTY 5 cut(s) 107, 1720, 1736, 1817, 2445
ArsI GACNNNNNNTTYG 6 cut(s) 688, 720, 1157, 1189, 1262, 1294
Asp700I GAANNNNTTC 2 cut(s) 1817, 2105
AspS9I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
AsuHPI GGTGA 8 cut(s) 4, 58, 132, 740, 1195, 1385, 1419, 1951
AsuII TTCGAA 1 cut(s) 1874
AvaI CYCGRG 1 cut(s) 699
AvaII GGWCC 3 cut(s) 1232, 1763, 2162
BaeGI GKGCMC 2 cut(s) 2142, 2223
BalI TGGCCA 2 cut(s) 1643, 1885
BamHI GGATCC 1 cut(s) 1604
BbrPI CACGTG 1 cut(s) 2300
Bbv12I GWGCWC 3 cut(s) 545, 650, 2142
BbvI GCAGC 5 cut(s) 46, 55, 668, 1130, 2017
BciT130I CCWGG 2 cut(s) 716, 2441
BciVI GTATCC 1 cut(s) 703
BclI TGATCA 1 cut(s) 445
BcoDI GTCTC 4 cut(s) 1158, 1429, 2070, 2513
BfaI CTAG 5 cut(s) 201, 345, 1137, 1215, 2364
BfmI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2523
BfrI CTTAAG 1 cut(s) 1345
BfuI GTATCC 1 cut(s) 703
BisI GCNGC 5 cut(s) 35, 44, 657, 1119, 2031
BlsI GCNGC 5 cut(s) 36, 45, 658, 1120, 2032
BmcAI AGTACT 2 cut(s) 30, 578
Bme1390I CCNGG 2 cut(s) 716, 2441
Bme18I GGWCC 3 cut(s) 1232, 1763, 2162
BmeT110I CYCGRG 1 cut(s) 699
BmgT120I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
BmiI GGNNCC 2 cut(s) 1606, 2479
BmrFI CCNGG 2 cut(s) 716, 2441
BmrI ACTGGG 2 cut(s) 1100, 2007
BmsI GCATC 4 cut(s) 1703, 1966, 2140, 2326
BmuI ACTGGG 2 cut(s) 1100, 2007
BpmI CTGGAG 3 cut(s) 759, 1355, 1938
Bpu14I TTCGAA 1 cut(s) 1874
Bsa29I ATCGAT 1 cut(s) 1199
BsaAI YACGTR 2 cut(s) 252, 2300
BsaBI GATNNNNATC 3 cut(s) 444, 618, 1656
BsaI GGTCTC 2 cut(s) 1429, 2070
BsaJI CCNNGG 3 cut(s) 714, 1830, 2439
BsaXI ACNNNNNCTCC 4 cut(s) 380, 410, 1779, 1809
Bsc4I CCNNNNNNNGG 1 cut(s) 2440
Bse3DI GCAATG 2 cut(s) 1024, 1152
Bse8I GATNNNNATC 3 cut(s) 444, 618, 1656
BseBI CCWGG 2 cut(s) 716, 2441
BseCI ATCGAT 1 cut(s) 1199
BseDI CCNNGG 3 cut(s) 714, 1830, 2439
BseGI GGATG 9 cut(s) 562, 799, 874, 1045, 1102, 1565, 1789, 1936, 2546
BseJI GATNNNNATC 3 cut(s) 444, 618, 1656
BseLI CCNNNNNNNGG 1 cut(s) 2440
BseMI GCAATG 2 cut(s) 1024, 1152
BseMII CTCAG 3 cut(s) 39, 297, 588
BseRI GAGGAG 2 cut(s) 81, 2172
BseSI GKGCMC 2 cut(s) 2142, 2223
BseXI GCAGC 5 cut(s) 46, 55, 668, 1130, 2017
BshFI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BshVI ATCGAT 1 cut(s) 1199
BsiHKAI GWGCWC 3 cut(s) 545, 650, 2142
BsiHKCI CYCGRG 1 cut(s) 699
BslFI GGGAC 3 cut(s) 709, 1088, 1514
BslI CCNNNNNNNGG 1 cut(s) 2440
BsmAI GTCTC 4 cut(s) 1158, 1429, 2070, 2513
BsmFI GGGAC 3 cut(s) 709, 1088, 1514
BsnI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
Bso31I GGTCTC 2 cut(s) 1429, 2070
BsoBI CYCGRG 1 cut(s) 699
Bsp119I TTCGAA 1 cut(s) 1874
Bsp1286I GDGCHC 4 cut(s) 545, 650, 2142, 2223
Bsp143I GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BspANI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BspCNI CTCAG 3 cut(s) 38, 296, 589
BspDI ATCGAT 1 cut(s) 1199
BspLI GGNNCC 2 cut(s) 1606, 2479
BspMAI CTGCAG 3 cut(s) 36, 658, 2527
BspPI GGATC 4 cut(s) 621, 1599, 1612, 1652
BspQI GCTCTTC 2 cut(s) 655, 1317
BspT104I TTCGAA 1 cut(s) 1874
BspTI CTTAAG 1 cut(s) 1345
BspTNI GGTCTC 2 cut(s) 1429, 2070
BsrDI GCAATG 2 cut(s) 1024, 1152
BssECI CCNNGG 3 cut(s) 714, 1830, 2439
BssMI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BssT1I CCWWGG 1 cut(s) 1830
Bst2UI CCWGG 2 cut(s) 716, 2441
Bst4CI ACNGT 4 cut(s) 631, 803, 1232, 2400
Bst6I CTCTTC 5 cut(s) 422, 453, 655, 1317, 1871
BstAFI CTTAAG 1 cut(s) 1345
BstAPI GCANNNNNTGC 1 cut(s) 2137
BstBAI YACGTR 2 cut(s) 252, 2300
BstBI TTCGAA 1 cut(s) 1874
BstC8I GCNNGC 2 cut(s) 1521, 2289
BstDEI CTNAG 8 cut(s) 25, 283, 480, 597, 681, 762, 895, 1403
BstF5I GGATG 9 cut(s) 562, 799, 874, 1045, 1102, 1565, 1789, 1936, 2546
BstKTI GATC 5 cut(s) 448, 616, 1607, 1654, 1660
BstMAI GTCTC 4 cut(s) 1158, 1429, 2070, 2513
BstMBI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
BstMWI GCNNNNNNNGC 9 cut(s) 40, 43, 1142, 1244, 1260, 1700, 1985, 2137, 2369
BstNI CCWGG 2 cut(s) 716, 2441
BstNSI RCATGY 1 cut(s) 1300
BstSCI CCNGG 2 cut(s) 714, 2439
BstSFI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2523
BstSLI GKGCMC 2 cut(s) 2142, 2223
BstV1I GCAGC 5 cut(s) 46, 55, 668, 1130, 2017
BstX2I RGATCY 1 cut(s) 1604
BstYI RGATCY 1 cut(s) 1604
Bsu15I ATCGAT 1 cut(s) 1199
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
BsuTUI ATCGAT 1 cut(s) 1199
BtsCI GGATG 9 cut(s) 562, 799, 874, 1045, 1102, 1565, 1789, 1936, 2546
BtsI GCAGTG 2 cut(s) 112, 1782
BtsIMutI CAGTG 9 cut(s) 112, 808, 1113, 1590, 1782, 1914, 2172, 2221, 2241
Cac8I GCNNGC 2 cut(s) 1521, 2289
CaiI CAGNNNCTG 1 cut(s) 290
Cfr13I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
ClaI ATCGAT 1 cut(s) 1199
CseI GACGC 1 cut(s) 1464
Csp6I GTAC 8 cut(s) 29, 82, 253, 366, 577, 981, 2017, 2544
CspCI CAANNNNNGTGG 2 cut(s) 1609, 1644
CviAII CATG 7 cut(s) 257, 1168, 1180, 1297, 1307, 1550, 2249
CviQI GTAC 8 cut(s) 29, 82, 253, 366, 577, 981, 2017, 2544
DdeI CTNAG 8 cut(s) 25, 283, 480, 597, 681, 762, 895, 1403
DpnI GATC 5 cut(s) 447, 615, 1606, 1653, 1659
DpnII GATC 5 cut(s) 445, 613, 1604, 1651, 1657
DraI TTTAAA 1 cut(s) 403
EaeI YGGCCR 2 cut(s) 1641, 1883
Eam1104I CTCTTC 5 cut(s) 422, 453, 655, 1317, 1871
EarI CTCTTC 5 cut(s) 422, 453, 655, 1317, 1871
Eco130I CCWWGG 1 cut(s) 1830
Eco31I GGTCTC 2 cut(s) 1429, 2070
Eco47I GGWCC 3 cut(s) 1232, 1763, 2162
Eco57I CTGAAG 4 cut(s) 531, 2128, 2175, 2352
Eco72I CACGTG 1 cut(s) 2300
Eco88I CYCGRG 1 cut(s) 699
EcoO109I RGGNCCY 1 cut(s) 1339
EcoRI GAATTC 1 cut(s) 107
EcoRII CCWGG 2 cut(s) 714, 2439
EcoT14I CCWWGG 1 cut(s) 1830
EcoT22I ATGCAT 1 cut(s) 2282
ErhI CCWWGG 1 cut(s) 1830
FaeI CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FaqI GGGAC 3 cut(s) 709, 1088, 1514
FatI CATG 7 cut(s) 256, 1167, 1179, 1296, 1306, 1549, 2248
FauNDI CATATG 1 cut(s) 2175
FbaI TGATCA 1 cut(s) 445
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 5 cut(s) 35, 44, 657, 1119, 2031
FokI GGATG 9 cut(s) 569, 806, 881, 1052, 1109, 1572, 1796, 1943, 2553
Fsp4HI GCNGC 5 cut(s) 35, 44, 657, 1119, 2031
FspBI CTAG 5 cut(s) 201, 345, 1137, 1215, 2364
GluI GCNGC 5 cut(s) 35, 44, 657, 1119, 2031
GsuI CTGGAG 3 cut(s) 759, 1355, 1938
HaeIII GGCC 5 cut(s) 5, 1340, 1523, 1643, 1885
HgaI GACGC 1 cut(s) 1464
Hin1II CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
HincII GTYRAC 1 cut(s) 759
HindII GTYRAC 1 cut(s) 759
HindIII AAGCTT 2 cut(s) 1726, 1865
HphI GGTGA 8 cut(s) 4, 58, 132, 740, 1195, 1385, 1419, 1951
Hpy166II GTNNAC 4 cut(s) 351, 502, 759, 2140
Hpy188I TCNGA 5 cut(s) 1609, 1734, 2155, 2212, 2245
Hpy188III TCNNGA 5 cut(s) 1319, 1479, 1655, 2204, 2488
Hpy8I GTNNAC 4 cut(s) 351, 502, 759, 2140
HpyAV CCTTC 9 cut(s) 19, 62, 375, 379, 725, 1881, 2150, 2210, 2305
HpyCH4III ACNGT 4 cut(s) 631, 803, 1232, 2400
HpyCH4IV ACGT 3 cut(s) 99, 251, 2299
HpyF10VI GCNNNNNNNGC 9 cut(s) 40, 43, 1142, 1244, 1260, 1700, 1985, 2137, 2369
HpyF3I CTNAG 8 cut(s) 25, 283, 480, 597, 681, 762, 895, 1403
HpySE526I ACGT 3 cut(s) 99, 251, 2299
Hsp92II CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
Ksp22I TGATCA 1 cut(s) 445
Kzo9I GATC 5 cut(s) 445, 613, 1604, 1651, 1657
LguI GCTCTTC 2 cut(s) 655, 1317
LmnI GCTCC 3 cut(s) 1303, 1361, 1787
Lsp1109I GCAGC 5 cut(s) 46, 55, 668, 1130, 2017
LweI GCATC 4 cut(s) 1703, 1966, 2140, 2326
MaeI CTAG 5 cut(s) 201, 345, 1137, 1215, 2364
MaeII ACGT 3 cut(s) 99, 251, 2299
MaeIII GTNAC 3 cut(s) 1373, 2056, 2391
MalI GATC 5 cut(s) 447, 615, 1606, 1653, 1659
MboI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
MfeI CAATTG 1 cut(s) 1647
MflI RGATCY 1 cut(s) 1604
MhlI GDGCHC 4 cut(s) 545, 650, 2142, 2223
MlsI TGGCCA 2 cut(s) 1643, 1885
MluNI TGGCCA 2 cut(s) 1643, 1885
MlyI GAGTC 2 cut(s) 691, 2399
MmeI TCCRAC 4 cut(s) 508, 591, 949, 1281
Mox20I TGGCCA 2 cut(s) 1643, 1885
Mph1103I ATGCAT 1 cut(s) 2282
MroXI GAANNNNTTC 2 cut(s) 1817, 2105
MscI TGGCCA 2 cut(s) 1643, 1885
MslI CAYNNNNRTG 2 cut(s) 2234, 2253
Msp20I TGGCCA 2 cut(s) 1643, 1885
MspA1I CMGCKG 1 cut(s) 659
MspCI CTTAAG 1 cut(s) 1345
MspR9I CCNGG 2 cut(s) 716, 2441
MunI CAATTG 1 cut(s) 1647
MvaI CCWGG 2 cut(s) 716, 2441
MwoI GCNNNNNNNGC 9 cut(s) 40, 43, 1142, 1244, 1260, 1700, 1985, 2137, 2369
NdeI CATATG 1 cut(s) 2175
NdeII GATC 5 cut(s) 445, 613, 1604, 1651, 1657
NlaIII CATG 7 cut(s) 260, 1171, 1183, 1300, 1310, 1553, 2252
NlaIV GGNNCC 2 cut(s) 1606, 2479
NmuCI GTSAC 3 cut(s) 1373, 2056, 2391
NsiI ATGCAT 1 cut(s) 2282
NspI RCATGY 1 cut(s) 1300
NspV TTCGAA 1 cut(s) 1874
PaeR7I CTCGAG 1 cut(s) 699
PciI ACATGT 1 cut(s) 1296
PciSI GCTCTTC 2 cut(s) 655, 1317
PdmI GAANNNNTTC 2 cut(s) 1817, 2105
PfeI GAWTC 8 cut(s) 719, 773, 1024, 1685, 2207, 2315, 2455, 2491
PkrI GCNGC 5 cut(s) 36, 45, 658, 1120, 2032
PleI GAGTC 2 cut(s) 691, 2398
PmaCI CACGTG 1 cut(s) 2300
PmlI CACGTG 1 cut(s) 2300
PpsI GAGTC 2 cut(s) 691, 2398
Ppu21I YACGTR 2 cut(s) 252, 2300
PscI ACATGT 1 cut(s) 1296
Psp1406I AACGTT 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 714, 2439
PspCI CACGTG 1 cut(s) 2300
PspGI CCWGG 2 cut(s) 714, 2439
PspN4I GGNNCC 2 cut(s) 1606, 2479
PspPI GGNCC 4 cut(s) 1232, 1339, 1763, 2162
PspXI VCTCGAGB 1 cut(s) 699
PstI CTGCAG 3 cut(s) 36, 658, 2527
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 1 cut(s) 1604
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 8 cut(s) 30, 83, 254, 367, 578, 982, 2018, 2545
RsaNI GTAC 8 cut(s) 29, 82, 253, 366, 577, 981, 2017, 2544
RseI CAYNNNNRTG 2 cut(s) 2234, 2253
SapI GCTCTTC 2 cut(s) 655, 1317
SatI GCNGC 5 cut(s) 35, 44, 657, 1119, 2031
Sau3AI GATC 5 cut(s) 445, 613, 1604, 1651, 1657
Sau96I GGNCC 4 cut(s) 1232, 1339, 1763, 2162
ScaI AGTACT 2 cut(s) 30, 578
SchI GAGTC 2 cut(s) 691, 2399
ScrFI CCNGG 2 cut(s) 716, 2441
SduI GDGCHC 4 cut(s) 545, 650, 2142, 2223
SfaNI GCATC 4 cut(s) 1703, 1966, 2140, 2326
SfcI CTRYAG 5 cut(s) 32, 654, 1662, 1698, 2523
Sfr274I CTCGAG 1 cut(s) 699
SfuI TTCGAA 1 cut(s) 1874
SinI GGWCC 3 cut(s) 1232, 1763, 2162
SlaI CTCGAG 1 cut(s) 699
SmiMI CAYNNNNRTG 2 cut(s) 2234, 2253
SmlI CTYRAG 2 cut(s) 699, 1345
SmoI CTYRAG 2 cut(s) 699, 1345
SspI AATATT 1 cut(s) 1267
SspMI CTAG 5 cut(s) 201, 345, 1137, 1215, 2364
StyD4I CCNGG 2 cut(s) 714, 2439
StyI CCWWGG 1 cut(s) 1830
TaaI ACNGT 4 cut(s) 631, 803, 1232, 2400
TaiI ACGT 3 cut(s) 102, 254, 2302
TaqI TCGA 5 cut(s) 700, 1199, 1752, 1874, 2489
TatI WGTACW 3 cut(s) 28, 365, 576
TfiI GAWTC 8 cut(s) 719, 773, 1024, 1685, 2207, 2315, 2455, 2491
TscAI CASTG 9 cut(s) 119, 808, 1113, 1590, 1782, 1921, 2172, 2228, 2241
TseFI GTSAC 3 cut(s) 1373, 2056, 2391
TseI GCWGC 5 cut(s) 34, 43, 656, 1118, 2030
Tsp45I GTSAC 3 cut(s) 1373, 2056, 2391
TspDTI ATGAA 9 cut(s) 273, 897, 1128, 1208, 1810, 1889, 1947, 2162, 2271
TspRI CASTG 9 cut(s) 119, 808, 1113, 1590, 1782, 1921, 2172, 2228, 2241
Vha464I CTTAAG 1 cut(s) 1345
VneI GTGCAC 1 cut(s) 2138
VpaK11BI GGWCC 3 cut(s) 1232, 1763, 2162
XapI RAATTY 5 cut(s) 107, 1720, 1736, 1817, 2445
XceI RCATGY 1 cut(s) 1300
XhoI CTCGAG 1 cut(s) 699
XmiI GTMKAC 1 cut(s) 501
XmnI GAANNNNTTC 2 cut(s) 1817, 2105
XspI CTAG 5 cut(s) 201, 345, 1137, 1215, 2364
ZrmI AGTACT 2 cut(s) 30, 578
Zsp2I ATGCAT 1 cut(s) 2282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.