Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002573

Physical Location & Seq

Genomic Coordinates Reverse (-)

18079677 .. 18082966

Gene Structure 3290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G180100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGGCTGCAGGGACCGATTACCCATCTCCACTTTCCATGTTAGATGGCAGCATCAGAAAGGAGAATGTTACTGTTACAAAAGAAGAGAAATCACTTACTTTTGAGAGCTTAAAGCAACCGAACATGGGCAAACCTCCGCGGCACCTCTCAGCTATGAGGTATTGTGTGAGCTCTGCCCAGTTGGCTCCTGCAACTGAAGTGGAGTCGGATGTTGGGATTGTTAGCTCAAAGTCCTCATCAGATAGTAACTCCGCATTTGTACCTGTTTTTCGCTCTGGAAGCTGTTCAGAGATCGGTCCAAAACCTTATATGGAGGATGAGCATATCTGTATAGACAATATTTTCGAACATCTAGGTGCCACTGCGAACTTTCCTTCTCCTGGAGCTTTCTATGGGGTTTTTGATGGCCATGGTGGTACAGATGCAGCTTCTTTTATCAGAGAGAACATTTTGAGGTTTATAATTGAGGATTCACATTTCCCCTTTTGTGCCAAGAAGGCTATTAAGAGTGCTTTCCTAAACGCTGACCATGCTTTTGCTGATACTGGTTCTCTTGATAGTTCCTCTGGTACCACTGCACTTACTGCCCTCATATCTGGAAGGACGATGCTAATTGCCAATGCCGGGGACTGCCGAGCTGTGCTGGGAAGAAGAGGTAGGGCAGTTGAGCTTTCCAAAGACCATAAACCCAATTGTGCCTCAGAAAGAGTAAGAATTGAGAAACTGGGAGGTGTAGTTTATGATGGCTACCTTAACGGTCAATTATCGGTGGCACGAGCTCTTGGAGATTGGCACATGAAAGGCTCCAAAGGTTCCTCTTGTCCTTTAAGCGCAGAGCCGGAGCTTGAGGAGACAACTCTGAGTGAGGAAGATGAATTCTTGATCCTAGGCTGTGATGGGCTGTGGGATGTGATGAGCAGCCAATGCGCAGTTACAATTGCAAGGAAAGAATTAATGCTTCACAATGATCCTGAGAGATGCTCAAGAGAGCTGGTTAGGGAGGCACTCAAGCGCAATACCTGCGACAACCTGACAGTAGTTGTGGTATGCTTCTCCCCAGACCCACCACCTTTGCTTGAGATCCCGAAATTGAAATTCAAAAGGAGTATATCAGCAGAAGGTCTGAATCTTCTGCAGGAAGTACTAGATAGTAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

387

Amino Acids

41.79

Weight (kDa)

5.4

Isoelectric Point (pI)

52.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33700
fragaria_vesca	FvH4_2g16790 FvH4_2g16790 FvH4_2g16790 FvH4_5g25660
malus_domestica	MD05G1139000.v1.1 MD05G1139300.v1.1 MD06G1006700.v1.1 MD10G1141800.v1.1
prunus_persica	Prupe.8G180100_v2.0.a1 Prupe.8G180100_v2.0.a1 Prupe.8G180100_v2.0.a1
pyrus_communis	pycom05g13440 pycom05g13450 pycom06g00590 pycom10g12160
rosa_chinensis	RchiOBHm_Chr6g0280911 RchiOBHm_Chr7g0215951
rosa_laevigata	RLG00000002604 RLG00000013017
rosa_multiflora	Rmu_co8368733.1_g000001 Rmu_sc0004772.1_g000006
rosa_roxburghii	Rroxscaffold_3G00243750 Rroxscaffold_7G00187500
rosa_rugosa	Rorug06G0136200 Rorug06G0136300 Rorug06G0136400 Rorug06G0136500 Rorug06G0136600 Rorug07G0157300
rosa_samantha	Rh6AG249100 Rh6BG251000 Rh6CG251800 Rh6DG243500 Rh7AG295300 Rh7BG287300 Rh7CG315400 Rh7DG298000
rosa_wichuraiana	Rw6G021540 Rw7G025080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	461
Acc16I	TGCGCA	1 cut(s)	928
Acc36I	ACCTGC	1 cut(s)	1028
Acc65I	GGTACC	1 cut(s)	569
AccB1I	GGYRCC	3 cut(s)	141, 356, 569
AccII	CGCG	1 cut(s)	139
AciI	CCGC	3 cut(s)	137, 139, 252
AclWI	GGATC	3 cut(s)	877, 962, 1075
AcoI	YGGCCR	1 cut(s)	406
AcsI	RAATTY	2 cut(s)	875, 1094
AcuI	CTGAAG	1 cut(s)	216
AfaI	GTAC	4 cut(s)	261, 418, 571, 1143
AfiI	CCNNNNNNNGG	3 cut(s)	125, 380, 624
AgsI	TTSAA	2 cut(s)	1093, 1099
AjnI	CCWGG	1 cut(s)	379
Alw21I	GWGCWC	2 cut(s)	173, 781
Alw26I	GTCTC	1 cut(s)	845
AlwI	GGATC	3 cut(s)	877, 962, 1075
AoxI	GGCC	1 cut(s)	406
ApeKI	GCWGC	4 cut(s)	5, 48, 425, 918
ApoI	RAATTY	2 cut(s)	875, 1094
ArsI	GACNNNNNNTTYG	4 cut(s)	326, 358, 518, 550
AseI	ATTAAT	1 cut(s)	953
Asp700I	GAANNNNTTC	1 cut(s)	283
Asp718I	GGTACC	1 cut(s)	569
AspA2I	CCTAGG	1 cut(s)	886
AspLEI	GCGC	3 cut(s)	833, 929, 1014
AspS9I	GGNCC	2 cut(s)	12, 296
AsuC2I	CCSGG	1 cut(s)	625
AsuII	TTCGAA	1 cut(s)	345
AvaII	GGWCC	2 cut(s)	12, 296
AvrII	CCTAGG	1 cut(s)	886
BalI	TGGCCA	1 cut(s)	408
BanI	GGYRCC	3 cut(s)	141, 356, 569
BanII	GRGCYC	2 cut(s)	173, 781
BauI	CACGAG	1 cut(s)	774
Bbv12I	GWGCWC	2 cut(s)	173, 781
BbvI	GCAGC	3 cut(s)	60, 437, 930
BccI	CCATC	5 cut(s)	31, 38, 398, 737, 890
BciT130I	CCWGG	1 cut(s)	381
BcnI	CCSGG	1 cut(s)	625
BcoDI	GTCTC	1 cut(s)	845
BfaI	CTAG	3 cut(s)	353, 887, 1145
BfmI	CTRYAG	2 cut(s)	6, 1133
BfuAI	ACCTGC	1 cut(s)	1028
BglI	GCCNNNNNGGC	2 cut(s)	182, 497
BisI	GCNGC	5 cut(s)	6, 49, 140, 426, 919
BlnI	CCTAGG	1 cut(s)	886
BlsI	GCNGC	5 cut(s)	7, 50, 141, 427, 920
BmcAI	AGTACT	1 cut(s)	1143
Bme1390I	CCNGG	2 cut(s)	381, 625
Bme18I	GGWCC	2 cut(s)	12, 296
BmgT120I	GGNCC	2 cut(s)	12, 296
BmiI	GGNNCC	7 cut(s)	13, 143, 186, 358, 571, 805, 814
BmrFI	CCNGG	2 cut(s)	381, 625
BmrI	ACTGGG	2 cut(s)	172, 734
BmsI	GCATC	4 cut(s)	60, 412, 597, 968
BmuI	ACTGGG	2 cut(s)	172, 734
BplI	GAGNNNNNCTC	2 cut(s)	965, 997
BpmI	CTGGAG	1 cut(s)	402
Bpu14I	TTCGAA	1 cut(s)	345
BpuEI	CTTGAG	4 cut(s)	866, 967, 992, 1097
BpuMI	CCSGG	1 cut(s)	625
BsaJI	CCNNGG	4 cut(s)	137, 409, 624, 886
BsaXI	ACNNNNNCTCC	2 cut(s)	720, 750
Bsc4I	CCNNNNNNNGG	3 cut(s)	125, 380, 624
Bse1I	ACTGG	3 cut(s)	178, 550, 729
BseBI	CCWGG	1 cut(s)	381
BseDI	CCNNGG	4 cut(s)	137, 409, 624, 886
BseGI	GGATG	3 cut(s)	214, 322, 913
BseLI	CCNNNNNNNGG	3 cut(s)	125, 380, 624
BseMII	CTCAG	4 cut(s)	162, 714, 851, 963
BseNI	ACTGG	3 cut(s)	178, 550, 729
BseRI	GAGGAG	1 cut(s)	863
BseXI	GCAGC	3 cut(s)	60, 437, 930
BseYI	CCCAGC	1 cut(s)	643
BsgI	GTGCAG	1 cut(s)	561
Bsh1236I	CGCG	1 cut(s)	139
BshFI	GGCC	1 cut(s)	408
BshNI	GGYRCC	3 cut(s)	141, 356, 569
BsiHKAI	GWGCWC	2 cut(s)	173, 781
BsiSI	CCGG	2 cut(s)	624, 839
BslFI	GGGAC	2 cut(s)	25, 641
BslI	CCNNNNNNNGG	3 cut(s)	125, 380, 624
BsmAI	GTCTC	1 cut(s)	845
BsmFI	GGGAC	2 cut(s)	25, 641
BsnI	GGCC	1 cut(s)	408
Bsp119I	TTCGAA	1 cut(s)	345
Bsp1286I	GDGCHC	2 cut(s)	173, 781
Bsp143I	GATC	4 cut(s)	291, 882, 967, 1080
Bsp19I	CCATGG	1 cut(s)	409
BspACI	CCGC	3 cut(s)	137, 139, 252
BspANI	GGCC	1 cut(s)	408
BspCNI	CTCAG	4 cut(s)	161, 713, 852, 964
BspFNI	CGCG	1 cut(s)	139
BspHI	TCATGA	1 cut(s)	1157
BspLI	GGNNCC	7 cut(s)	13, 143, 186, 358, 571, 805, 814
BspMAI	CTGCAG	2 cut(s)	10, 1137
BspMI	ACCTGC	1 cut(s)	1028
BspPI	GGATC	3 cut(s)	877, 962, 1075
BspT104I	TTCGAA	1 cut(s)	345
BspT107I	GGYRCC	3 cut(s)	141, 356, 569
BsrI	ACTGG	3 cut(s)	178, 550, 729
BssECI	CCNNGG	4 cut(s)	137, 409, 624, 886
BssMI	GATC	4 cut(s)	291, 882, 967, 1080
BssSI	CACGAG	1 cut(s)	774
BssT1I	CCWWGG	2 cut(s)	409, 886
Bst2BI	CACGAG	1 cut(s)	774
Bst2UI	CCWGG	1 cut(s)	381
Bst4CI	ACNGT	3 cut(s)	73, 758, 1036
Bst6I	CTCTTC	2 cut(s)	78, 646
BstAPI	GCANNNNNTGC	3 cut(s)	584, 924, 1020
BstBI	TTCGAA	1 cut(s)	345
BstDEI	CTNAG	4 cut(s)	148, 700, 860, 972
BstDSI	CCRYGG	2 cut(s)	137, 409
BstF5I	GGATG	3 cut(s)	214, 322, 913
BstFNI	CGCG	1 cut(s)	139
BstHHI	GCGC	3 cut(s)	833, 929, 1014
BstKTI	GATC	4 cut(s)	294, 885, 970, 1083
BstMAI	GTCTC	1 cut(s)	845
BstMBI	GATC	4 cut(s)	291, 882, 967, 1080
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 279, 497, 530, 584, 924, 1020
BstNI	CCWGG	1 cut(s)	381
BstSCI	CCNGG	2 cut(s)	379, 623
BstSFI	CTRYAG	2 cut(s)	6, 1133
BstUI	CGCG	1 cut(s)	139
BstV1I	GCAGC	3 cut(s)	60, 437, 930
BstX2I	RGATCY	1 cut(s)	1080
BstYI	RGATCY	1 cut(s)	1080
BsuRI	GGCC	1 cut(s)	408
BtgI	CCRYGG	2 cut(s)	137, 409
BtsCI	GGATG	3 cut(s)	214, 322, 913
BtsI	GCAGTG	2 cut(s)	360, 573
BtsIMutI	CAGTG	2 cut(s)	360, 573
BveI	ACCTGC	1 cut(s)	1028
CciI	TCATGA	1 cut(s)	1157
CfoI	GCGC	3 cut(s)	833, 929, 1014
Cfr13I	GGNCC	2 cut(s)	12, 296
Cfr42I	CCGCGG	1 cut(s)	140
Csp6I	GTAC	4 cut(s)	260, 417, 570, 1142
CspCI	CAANNNNNGTGG	4 cut(s)	180, 215, 1053, 1088
CviAII	CATG	6 cut(s)	37, 124, 410, 530, 796, 1158
CviQI	GTAC	4 cut(s)	260, 417, 570, 1142
DdeI	CTNAG	4 cut(s)	148, 700, 860, 972
DpnI	GATC	4 cut(s)	293, 884, 969, 1082
DpnII	GATC	4 cut(s)	291, 882, 967, 1080
EaeI	YGGCCR	1 cut(s)	406
Eam1104I	CTCTTC	2 cut(s)	78, 646
EarI	CTCTTC	2 cut(s)	78, 646
Ecl136II	GAGCTC	2 cut(s)	171, 779
Eco130I	CCWWGG	2 cut(s)	409, 886
Eco24I	GRGCYC	2 cut(s)	173, 781
Eco47I	GGWCC	2 cut(s)	12, 296
Eco53kI	GAGCTC	2 cut(s)	171, 779
Eco57I	CTGAAG	1 cut(s)	216
EcoICRI	GAGCTC	2 cut(s)	171, 779
EcoRI	GAATTC	1 cut(s)	875
EcoRII	CCWGG	1 cut(s)	379
EcoT14I	CCWWGG	2 cut(s)	409, 886
EcoT38I	GRGCYC	2 cut(s)	173, 781
ErhI	CCWWGG	2 cut(s)	409, 886
FaeI	CATG	6 cut(s)	40, 127, 413, 533, 799, 1161
FaqI	GGGAC	2 cut(s)	25, 641
FatI	CATG	6 cut(s)	36, 123, 409, 529, 795, 1157
Fnu4HI	GCNGC	5 cut(s)	6, 49, 140, 426, 919
FokI	GGATG	3 cut(s)	221, 329, 920
FriOI	GRGCYC	2 cut(s)	173, 781
Fsp4HI	GCNGC	5 cut(s)	6, 49, 140, 426, 919
FspBI	CTAG	3 cut(s)	353, 887, 1145
FspI	TGCGCA	1 cut(s)	928
GlaI	GCGC	3 cut(s)	832, 928, 1013
GluI	GCNGC	5 cut(s)	6, 49, 140, 426, 919
GsaI	CCCAGC	1 cut(s)	647
GsuI	CTGGAG	1 cut(s)	402
HaeIII	GGCC	1 cut(s)	408
HapII	CCGG	2 cut(s)	624, 839
HhaI	GCGC	3 cut(s)	833, 929, 1014
Hin1II	CATG	6 cut(s)	40, 127, 413, 533, 799, 1161
Hin6I	GCGC	3 cut(s)	831, 927, 1012
HinP1I	GCGC	3 cut(s)	831, 927, 1012
HinfI	GANTC	3 cut(s)	203, 470, 1126
HpaII	CCGG	2 cut(s)	624, 839
Hpy188I	TCNGA	8 cut(s)	56, 208, 241, 289, 440, 703, 861, 1125
Hpy188III	TCNNGA	8 cut(s)	276, 554, 597, 880, 971, 984, 1084, 1158
HpyAV	CCTTC	4 cut(s)	384, 490, 594, 1112
HpyCH4III	ACNGT	3 cut(s)	73, 758, 1036
HpyCH4V	TGCA	6 cut(s)	8, 191, 425, 578, 941, 1135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 279, 497, 530, 584, 924, 1020
HpyF3I	CTNAG	4 cut(s)	148, 700, 860, 972
Hsp92II	CATG	6 cut(s)	40, 127, 413, 533, 799, 1161
HspAI	GCGC	3 cut(s)	831, 927, 1012
KpnI	GGTACC	1 cut(s)	573
KspI	CCGCGG	1 cut(s)	140
Kzo9I	GATC	4 cut(s)	291, 882, 967, 1080
LmnI	GCTCC	4 cut(s)	190, 383, 809, 841
Lsp1109I	GCAGC	3 cut(s)	60, 437, 930
LweI	GCATC	4 cut(s)	60, 412, 597, 968
MaeI	CTAG	3 cut(s)	353, 887, 1145
MaeIII	GTNAC	4 cut(s)	67, 73, 245, 931
MalI	GATC	4 cut(s)	293, 884, 969, 1082
MboI	GATC	4 cut(s)	291, 882, 967, 1080
MboII	GAAGA	5 cut(s)	95, 660, 663, 881, 1121
MfeI	CAATTG	2 cut(s)	691, 936
MflI	RGATCY	1 cut(s)	1080
MhlI	GDGCHC	2 cut(s)	173, 781
MlsI	TGGCCA	1 cut(s)	408
MluNI	TGGCCA	1 cut(s)	408
MlyI	GAGTC	1 cut(s)	212
MmeI	TCCRAC	1 cut(s)	186
Mox20I	TGGCCA	1 cut(s)	408
MroXI	GAANNNNTTC	1 cut(s)	283
MscI	TGGCCA	1 cut(s)	408
MseI	TTAA	5 cut(s)	110, 504, 753, 827, 953
MslI	CAYNNNNRTG	1 cut(s)	354
Msp20I	TGGCCA	1 cut(s)	408
MspA1I	CMGCKG	1 cut(s)	139
MspI	CCGG	2 cut(s)	624, 839
MspR9I	CCNGG	2 cut(s)	381, 625
MunI	CAATTG	2 cut(s)	691, 936
MvaI	CCWGG	1 cut(s)	381
MvnI	CGCG	1 cut(s)	139
MwoI	GCNNNNNNNGC	7 cut(s)	182, 279, 497, 530, 584, 924, 1020
NciI	CCSGG	1 cut(s)	625
NcoI	CCATGG	1 cut(s)	409
NdeII	GATC	4 cut(s)	291, 882, 967, 1080
NlaIII	CATG	6 cut(s)	40, 127, 413, 533, 799, 1161
NlaIV	GGNNCC	7 cut(s)	13, 143, 186, 358, 571, 805, 814
NmeAIII	GCCGAG	1 cut(s)	659
NsbI	TGCGCA	1 cut(s)	928
NspV	TTCGAA	1 cut(s)	345
PagI	TCATGA	1 cut(s)	1157
PdmI	GAANNNNTTC	1 cut(s)	283
PfeI	GAWTC	2 cut(s)	470, 1126
PfoI	TCCNGGA	1 cut(s)	379
PkrI	GCNGC	5 cut(s)	7, 50, 141, 427, 920
PleI	GAGTC	1 cut(s)	211
PpsI	GAGTC	1 cut(s)	211
PshBI	ATTAAT	1 cut(s)	953
PsiI	TTATAA	1 cut(s)	461
Psp124BI	GAGCTC	2 cut(s)	173, 781
Psp6I	CCWGG	1 cut(s)	379
PspFI	CCCAGC	1 cut(s)	643
PspGI	CCWGG	1 cut(s)	379
PspN4I	GGNNCC	7 cut(s)	13, 143, 186, 358, 571, 805, 814
PspPI	GGNCC	2 cut(s)	12, 296
PstI	CTGCAG	2 cut(s)	10, 1137
PsuI	RGATCY	1 cut(s)	1080
RsaI	GTAC	4 cut(s)	261, 418, 571, 1143
RsaNI	GTAC	4 cut(s)	260, 417, 570, 1142
RseI	CAYNNNNRTG	1 cut(s)	354
SacI	GAGCTC	2 cut(s)	173, 781
SacII	CCGCGG	1 cut(s)	140
SaqAI	TTAA	5 cut(s)	110, 504, 753, 827, 953
SatI	GCNGC	5 cut(s)	6, 49, 140, 426, 919
Sau3AI	GATC	4 cut(s)	291, 882, 967, 1080
Sau96I	GGNCC	2 cut(s)	12, 296
ScaI	AGTACT	1 cut(s)	1143
SchI	GAGTC	1 cut(s)	212
ScrFI	CCNGG	2 cut(s)	381, 625
SduI	GDGCHC	2 cut(s)	173, 781
SfaNI	GCATC	4 cut(s)	60, 412, 597, 968
SfcI	CTRYAG	2 cut(s)	6, 1133
Sfr303I	CCGCGG	1 cut(s)	140
SfuI	TTCGAA	1 cut(s)	345
SgrBI	CCGCGG	1 cut(s)	140
SinI	GGWCC	2 cut(s)	12, 296
SmiMI	CAYNNNNRTG	1 cut(s)	354
SmlI	CTYRAG	4 cut(s)	845, 982, 1007, 1076
SmoI	CTYRAG	4 cut(s)	845, 982, 1007, 1076
SsiI	CCGC	3 cut(s)	137, 139, 252
SspI	AATATT	1 cut(s)	340
SspMI	CTAG	3 cut(s)	353, 887, 1145
SstI	GAGCTC	2 cut(s)	173, 781
StyD4I	CCNGG	2 cut(s)	379, 623
StyI	CCWWGG	2 cut(s)	409, 886
TaaI	ACNGT	3 cut(s)	73, 758, 1036
TaqI	TCGA	1 cut(s)	345
TaqII	GACCGA	2 cut(s)	29, 284
TatI	WGTACW	1 cut(s)	1141
TauI	GCSGC	1 cut(s)	142
TfiI	GAWTC	2 cut(s)	470, 1126
Tru1I	TTAA	5 cut(s)	110, 504, 753, 827, 953
Tru9I	TTAA	5 cut(s)	110, 504, 753, 827, 953
TscAI	CASTG	2 cut(s)	367, 580
TseI	GCWGC	4 cut(s)	5, 48, 425, 918
TspDTI	ATGAA	2 cut(s)	812, 888
TspRI	CASTG	2 cut(s)	367, 580
VpaK11BI	GGWCC	2 cut(s)	12, 296
VspI	ATTAAT	1 cut(s)	953
XapI	RAATTY	2 cut(s)	875, 1094
XmaJI	CCTAGG	1 cut(s)	886
XmnI	GAANNNNTTC	1 cut(s)	283
XspI	CTAG	3 cut(s)	353, 887, 1145
ZrmI	AGTACT	1 cut(s)	1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.