Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0006097

Physical Location & Seq

Genomic Coordinates Forward (+)

10393158 .. 10396562

Gene Structure 3405 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGCAATCCGGTGGCGGAGGAGGAGGCGGGCCCGGCAGGGGAGTGGGCCCGGCTGGCCGTGCCGGGTCGACGTCGTCGGCTGCTTCGCCGTCTTCATCGTCCTCGGCCGTGTCAACGCCACGCCTGGGTTTTGATTCGGTGCAGCATCAGCAACATCAGCAGCAACAGCAACAGCAGCAGCAGCAGTTTGGGTCTAGACAGCCATTACACCAACAACAATTTTTAAGAAAACCTGAAGGGAATGAAGCACTTCGAGCATATCAAGTTGCTGGTATGCAAGGAGTTTTGGGTGGGGGCAATTTTGTTTCATCTTCCAGCTCCAGTCAAATGCCTCAACAATCTAGGAAGTTCATTGATTTGGCTCAACAACATGGCTCCCAGGATGGACAGAGCCGGAGTCAAGGTGTTGACCAGCAAGCATTAAATCCAGTTCATCAAGTTTATCCTCAGTATGCTTTTCAGGCAGCCCAGCAGAAGTCAGGTTTGACAATGCAACCTCAGCAGCAAGCAAAAATGGGATCATTGGGGCCGCCATCTGGAAAGGATCAGGACATGCGATTGGGAAATATGAAAATGCAGGAACTCATGTCTAATCCGGGATCTAGTCAGGCACAAGCATCATCGTCTAAGAATTTGATGGAACATTTTACTCGTGGAGAAAAGCAGATGGACCAAGGACAGCCACCAGTCTCTGACCGAAGGAGTGACTCGAAGCCTTCAGCCCAGCCATCAGGAATGGGTCAATTCATGCCTGGAAACATGTTAAGGCCAATGCTGGCACCACAGTCTCAGCCAAGTGCCCAAACCATGCCAAATAACCAGATCGCATTAGCTGCTCAGTTGCAAGCATTTGCACTTGAGCACAACATTGATCTTTCACAGCCTGGAAATGCCAACTTAATGTCACAACTCATTCCACTGTTGCAGTCGAGGATTGCTACTCAACAGAAAGCAAATGAAAGCAACATGGGTGCACAATCCTCCCCTGTTCCAGTGTCAAAGCAGCAGGTTACTTCTCCTCCAGTAATGCGTGAGAGTTCTCCTCATGCTAATACATCAAGTGATGTATCTGGGCAATCTACCTCTGCAAAAGCAAAGCAGACAGTTGCGGCTAACCCTTTTGTTTCAGGTTCAAGTAATAGCATCTTTAACAATAGTAGCAGCATTCCTATGCAGCAGTTTTCTGTTCATGGCAGAGAAAACCAGATGCCACCTAAGCAGTCAAATCCTTTTGGAAATGGAATGACTTCTACCCATCCCACACAGTCTGCAAATACAAGCCAGGGTGTGGATCACTCTTCCCATGTAAAAAGTTCACAAAACAATCCAGAAACATTGCAGATGCAAAACCATCGACAGGTGAGTGGATCTTCTTCACAAGCTGTGGTTCCTAATGATGGGGGTTCTGGCAACAAGAACCAGTCACAAGGTGGACTTACTACCCGGATGGGACAGCAACACCATGGGTTCACTAAACAGCAGCTGCATGTTCTTAAAGCGCAAATACTAGCATTTAGGCGACTCAAGAAAGGTGAAGGCACACTCCCTCAAGAACTTCTACGGGCTATTGCTCCACCACCTCTTGAGCTGCAGCTACAGCAGCAATTGCTTCCTGGAGGAGGAAGCATTCAGGATAAATCTTCTGGGAAAGTTTTAGAAGATCATGTGCGGCATATGGAGTCCAATGAGAAAGATTCACAGGCTGTGGCATCAAAGAATGCACAGAACATTACAAAAGAGGAAGCTTTTACCGGAGAAGAAAAAGCAACTCTATCAACCATTCATGTGCAAGGAAAGCCTGCTGTGGTGAAGGAACCTTCTCCCTTGGTGTCTTCTGGAAAAGAAGAGCAACATTCTACTTTATCTTCTGTAAAGTCAGACCATGAAGTTGAACGTGGTATTCAAAAAGCTTCTGTTAGAACTGAGATTCCAGTTGATAGGGGAAAGTCTGTTGCATCACAGGTCGCTGTATCTGATGCCATGCAAGTAAAAAAGCCTCCACAATCAAGCACTGTACCGCAGCCAAAAGATGTTAGCTCTGCTAGAAAGTATCATGGACCTCTGTTTGATTTCCCCTTTTTCACTAGGAAACATGACTCTTTTGGTTTAGGGGTGATGGTAAATAACAACAACAACAATAATAATCTAACATTGGCATATGATGTCAAAGATCGTTCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009653 GO:0009987 GO:0010199 GO:0010468 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0032502 GO:0040029 GO:0043044 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048646 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060147 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0065007 GO:0070920 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090691 GO:0097159 GO:1900034 GO:1900036 GO:1901363 GO:1903798

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Bromodomain Helicase_C QLQ SNF2_N

Protein Analysis

728

Amino Acids

77.91

Weight (kDa)

9.72

Isoelectric Point (pI)

66.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	490 - 523	7.4e-09	QLQ

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020 AT2G46020
fragaria_vesca	FvH4_7g14720
malus_domestica	MD01G1065800.v1.1 MD07G1134800.v1.1
prunus_persica	Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1 Prupe.2G172900_v2.0.a1
pyrus_communis	pycom01g09500 pycom01g09510 pycom07g13210
rosa_chinensis	RchiOBHm_Chr1g0356661
rosa_laevigata	RLG00000028089
rosa_multiflora	Rmu_sc0013188.1_g000005 Rmu_sc0037764.1_g000001
rosa_roxburghii	Rroxscaffold_4G00299450
rosa_rugosa	Rorug01G0250400
rosa_samantha	Rh1AG264300 Rh1BG231900 Rh1CG247900 Rh1DG259500
rosa_wichuraiana	Rw1G023380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	997
AccB1I	GGYRCC	1 cut(s)	778
AccB7I	CCANNNNNTGG	1 cut(s)	1288
AccI	GTMKAC	1 cut(s)	68
AciI	CCGC	6 cut(s)	15, 27, 530, 1109, 1669, 2018
AclWI	GGATC	5 cut(s)	526, 552, 607, 1299, 1375
AcoI	YGGCCR	2 cut(s)	55, 105
AcsI	RAATTY	1 cut(s)	631
AcuI	CTGAAG	2 cut(s)	255, 702
AcyI	GRCGYC	1 cut(s)	71
AdeI	CACNNNGTG	1 cut(s)	1430
AfaI	GTAC	1 cut(s)	2016
AfiI	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
AflIII	ACRYGT	1 cut(s)	759
AgsI	TTSAA	3 cut(s)	1134, 1892, 1904
AjnI	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
AloI	GAACNNNNNNTCC	2 cut(s)	1912, 1944
AluBI	AGCT	9 cut(s)	318, 833, 1382, 1483, 1588, 1594, 1745, 1910, 2037
AluI	AGCT	9 cut(s)	318, 833, 1382, 1483, 1588, 1594, 1745, 1910, 2037
Alw21I	GWGCWC	2 cut(s)	864, 976
Alw26I	GTCTC	2 cut(s)	694, 792
Alw44I	GTGCAC	1 cut(s)	972
AlwI	GGATC	5 cut(s)	526, 552, 607, 1299, 1375
AlwNI	CAGNNNCTG	2 cut(s)	692, 1483
AoxI	GGCC	6 cut(s)	29, 46, 55, 105, 527, 767
ApaI	GGGCCC	2 cut(s)	33, 50
ApaLI	GTGCAC	1 cut(s)	972
ApoI	RAATTY	1 cut(s)	631
Asp700I	GAANNNNTTC	2 cut(s)	249, 1246
AspLEI	GCGC	1 cut(s)	1501
AspS9I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
AsuC2I	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
AsuHPI	GGTGA	4 cut(s)	1372, 1544, 1819, 2125
AvaII	GGWCC	2 cut(s)	670, 2057
BaeGI	GKGCMC	4 cut(s)	33, 50, 802, 976
BanI	GGYRCC	1 cut(s)	778
BanII	GRGCYC	2 cut(s)	33, 50
BauI	CACGAG	1 cut(s)	651
BbsI	GAAGAC	2 cut(s)	84, 1824
Bbv12I	GWGCWC	2 cut(s)	864, 976
BbvCI	CCTCAGC	1 cut(s)	498
BceAI	ACGGC	3 cut(s)	42, 73, 92
BcgI	CGANNNNNNTGC	2 cut(s)	1334, 1368
BciT130I	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
BcnI	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
BcoDI	GTCTC	2 cut(s)	694, 792
BfaI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
BfmI	CTRYAG	2 cut(s)	1589, 1595
BfuAI	ACCTGC	1 cut(s)	997
BglI	GCCNNNNNGGC	1 cut(s)	54
Bme18I	GGWCC	2 cut(s)	670, 2057
BmgT120I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
BmiI	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
BmsI	GCATC	8 cut(s)	154, 626, 1152, 1197, 1332, 1718, 1964, 1966
BpiI	GAAGAC	2 cut(s)	84, 1824
BplI	GAGNNNNNCTC	2 cut(s)	1027, 1059
BpmI	CTGGAG	3 cut(s)	304, 1005, 1635
Bpu10I	CCTNAGC	2 cut(s)	498, 1215
BpuEI	CTTGAG	4 cut(s)	878, 1508, 1533, 1604
BpuMI	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
BsaHI	GRCGYC	1 cut(s)	71
BsaJI	CCNNGG	7 cut(s)	102, 124, 378, 673, 1282, 1462, 1824
BsaWI	WCCGGW	2 cut(s)	8, 1751
BsaXI	ACNNNNNCTCC	4 cut(s)	388, 418, 1003, 1033
Bsc4I	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
Bse1I	ACTGG	7 cut(s)	321, 428, 686, 992, 1022, 1420, 1931
Bse3DI	GCAATG	1 cut(s)	1334
BseBI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
BseDI	CCNNGG	7 cut(s)	102, 124, 378, 673, 1282, 1462, 1824
BseGI	GGATG	3 cut(s)	388, 1255, 1452
BseLI	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
BseMI	GCAATG	1 cut(s)	1334
BseMII	CTCAG	5 cut(s)	461, 512, 803, 851, 1914
BseNI	ACTGG	7 cut(s)	321, 428, 686, 992, 1022, 1420, 1931
BseRI	GAGGAG	5 cut(s)	33, 36, 1008, 1032, 1632
BseSI	GKGCMC	4 cut(s)	33, 50, 802, 976
BseX3I	CGGCCG	1 cut(s)	105
BseYI	CCCAGC	2 cut(s)	468, 723
BsgI	GTGCAG	1 cut(s)	161
Bsh1285I	CGRYCG	1 cut(s)	108
BshFI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
BshNI	GGYRCC	1 cut(s)	778
BsiEI	CGRYCG	1 cut(s)	108
BsiHKAI	GWGCWC	2 cut(s)	864, 976
BsiSI	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
BslFI	GGGAC	1 cut(s)	1464
BslI	CCNNNNNNNGG	7 cut(s)	38, 125, 536, 1288, 1357, 1397, 1619
BsmAI	GTCTC	2 cut(s)	694, 792
BsmFI	GGGAC	1 cut(s)	1464
BsmI	GAATGC	3 cut(s)	1164, 1626, 1723
BsnI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
Bsp120I	GGGCCC	2 cut(s)	29, 46
Bsp1286I	GDGCHC	5 cut(s)	33, 50, 802, 864, 976
Bsp143I	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
Bsp19I	CCATGG	1 cut(s)	1462
BspACI	CCGC	6 cut(s)	15, 27, 530, 1109, 1669, 2018
BspANI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
BspCNI	CTCAG	5 cut(s)	460, 511, 802, 850, 1915
BspLI	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
BspMAI	CTGCAG	1 cut(s)	1593
BspMI	ACCTGC	1 cut(s)	997
BspPI	GGATC	5 cut(s)	526, 552, 607, 1299, 1375
BspQI	GCTCTTC	1 cut(s)	1839
BspT107I	GGYRCC	1 cut(s)	778
BsrDI	GCAATG	1 cut(s)	1334
BsrI	ACTGG	7 cut(s)	321, 428, 686, 992, 1022, 1420, 1931
BssECI	CCNNGG	7 cut(s)	102, 124, 378, 673, 1282, 1462, 1824
BssMI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
BssNI	GRCGYC	1 cut(s)	71
BssSI	CACGAG	1 cut(s)	651
BssT1I	CCWWGG	3 cut(s)	673, 1462, 1824
Bst2BI	CACGAG	1 cut(s)	651
Bst2UI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
Bst4CI	ACNGT	5 cut(s)	786, 921, 1105, 1266, 2014
Bst6I	CTCTTC	2 cut(s)	1303, 1839
BstACI	GRCGYC	1 cut(s)	71
BstAPI	GCANNNNNTGC	2 cut(s)	833, 1606
BstC8I	GCNNGC	7 cut(s)	29, 55, 417, 507, 777, 846, 1800
BstDEI	CTNAG	7 cut(s)	447, 498, 627, 789, 837, 1215, 1923
BstDSI	CCRYGG	1 cut(s)	1462
BstENI	CCTNNNNNAGG	1 cut(s)	1617
BstF5I	GGATG	3 cut(s)	388, 1255, 1452
BstHHI	GCGC	1 cut(s)	1501
BstKTI	GATC	9 cut(s)	521, 547, 602, 825, 874, 1294, 1370, 1663, 2173
BstMAI	GTCTC	2 cut(s)	694, 792
BstMBI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
BstMCI	CGRYCG	1 cut(s)	108
BstNI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
BstNSI	RCATGY	3 cut(s)	556, 763, 1490
BstSFI	CTRYAG	2 cut(s)	1589, 1595
BstSLI	GKGCMC	4 cut(s)	33, 50, 802, 976
BstV2I	GAAGAC	2 cut(s)	84, 1824
BstX2I	RGATCY	2 cut(s)	599, 1367
BstYI	RGATCY	2 cut(s)	599, 1367
BstZI	CGGCCG	1 cut(s)	105
BsuRI	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
BtgI	CCRYGG	1 cut(s)	1462
BtsCI	GGATG	3 cut(s)	388, 1255, 1452
BtsIMutI	CAGTG	3 cut(s)	917, 999, 2010
BveI	ACCTGC	1 cut(s)	997
Cac8I	GCNNGC	7 cut(s)	29, 55, 417, 507, 777, 846, 1800
CaiI	CAGNNNCTG	2 cut(s)	692, 1483
CfoI	GCGC	1 cut(s)	1501
Cfr13I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
Csp6I	GTAC	1 cut(s)	2015
CviQI	GTAC	1 cut(s)	2015
DdeI	CTNAG	7 cut(s)	447, 498, 627, 789, 837, 1215, 1923
DpnI	GATC	9 cut(s)	520, 546, 601, 824, 873, 1293, 1369, 1662, 2172
DpnII	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
DraIII	CACNNNGTG	1 cut(s)	1430
EaeI	YGGCCR	2 cut(s)	55, 105
EagI	CGGCCG	1 cut(s)	105
Eam1104I	CTCTTC	2 cut(s)	1303, 1839
EarI	CTCTTC	2 cut(s)	1303, 1839
EciI	GGCGGA	1 cut(s)	30
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	3 cut(s)	673, 1462, 1824
Eco24I	GRGCYC	2 cut(s)	33, 50
Eco47I	GGWCC	2 cut(s)	670, 2057
Eco52I	CGGCCG	1 cut(s)	105
Eco57I	CTGAAG	2 cut(s)	255, 702
EcoNI	CCTNNNNNAGG	1 cut(s)	1617
EcoRII	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
EcoT14I	CCWWGG	3 cut(s)	673, 1462, 1824
EcoT38I	GRGCYC	2 cut(s)	33, 50
ErhI	CCWWGG	3 cut(s)	673, 1462, 1824
FalI	AAGNNNNNCTT	2 cut(s)	1419, 1451
FaqI	GGGAC	1 cut(s)	1464
FauI	CCCGC	1 cut(s)	20
FauNDI	CATATG	2 cut(s)	1674, 2158
FblI	GTMKAC	1 cut(s)	68
FokI	GGATG	3 cut(s)	395, 1242, 1459
FriOI	GRGCYC	2 cut(s)	33, 50
FspBI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
GlaI	GCGC	1 cut(s)	1500
GsaI	CCCAGC	2 cut(s)	472, 727
GsuI	CTGGAG	3 cut(s)	304, 1005, 1635
HaeIII	GGCC	6 cut(s)	31, 48, 57, 107, 529, 769
HapII	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
HhaI	GCGC	1 cut(s)	1501
Hin1I	GRCGYC	1 cut(s)	71
Hin6I	GCGC	1 cut(s)	1499
HinP1I	GCGC	1 cut(s)	1499
HincII	GTYRAC	3 cut(s)	69, 114, 409
HindII	GTYRAC	3 cut(s)	69, 114, 409
HindIII	AAGCTT	2 cut(s)	1743, 1908
HinfI	GANTC	8 cut(s)	134, 397, 707, 1521, 1679, 1694, 1927, 2096
HpaII	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
HphI	GGTGA	4 cut(s)	1372, 1544, 1819, 2125
Hpy166II	GTNNAC	7 cut(s)	69, 114, 409, 974, 1316, 1433, 1470
Hpy188I	TCNGA	3 cut(s)	694, 1879, 1975
Hpy8I	GTNNAC	7 cut(s)	69, 114, 409, 974, 1316, 1433, 1470
Hpy99I	CGWCG	3 cut(s)	73, 76, 79
HpyAV	CCTTC	6 cut(s)	230, 693, 726, 1529, 1804, 1827
HpyCH4III	ACNGT	5 cut(s)	786, 921, 1105, 1266, 2014
HpyCH4IV	ACGT	2 cut(s)	71, 1894
HpyF3I	CTNAG	7 cut(s)	447, 498, 627, 789, 837, 1215, 1923
HpySE526I	ACGT	2 cut(s)	71, 1894
Hsp92I	GRCGYC	1 cut(s)	71
HspAI	GCGC	1 cut(s)	1499
Kzo9I	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
LguI	GCTCTTC	1 cut(s)	1839
LmnI	GCTCC	3 cut(s)	323, 380, 1576
LweI	GCATC	8 cut(s)	154, 626, 1152, 1197, 1332, 1718, 1964, 1966
MaeI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
MaeII	ACGT	2 cut(s)	71, 1894
MaeIII	GTNAC	4 cut(s)	704, 903, 1009, 1422
MalI	GATC	9 cut(s)	520, 546, 601, 824, 873, 1293, 1369, 1662, 2172
MboI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
MfeI	CAATTG	1 cut(s)	1604
MflI	RGATCY	2 cut(s)	599, 1367
MhlI	GDGCHC	5 cut(s)	33, 50, 802, 864, 976
MluCI	AATT	5 cut(s)	218, 298, 631, 743, 1604
MlyI	GAGTC	5 cut(s)	406, 701, 1515, 1688, 2090
MroXI	GAANNNNTTC	2 cut(s)	249, 1246
MseI	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
MslI	CAYNNNNRTG	2 cut(s)	1169, 1784
MspA1I	CMGCKG	1 cut(s)	1483
MspI	CCGG	8 cut(s)	9, 33, 50, 63, 394, 596, 1444, 1752
MunI	CAATTG	1 cut(s)	1604
Mva1269I	GAATGC	3 cut(s)	1164, 1626, 1723
MvaI	CCWGG	6 cut(s)	125, 380, 753, 885, 1283, 1614
NciI	CCSGG	5 cut(s)	33, 50, 64, 597, 1444
NcoI	CCATGG	1 cut(s)	1462
NdeI	CATATG	2 cut(s)	1674, 2158
NdeII	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
NlaIV	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
NmeAIII	GCCGAG	1 cut(s)	83
NmuCI	GTSAC	3 cut(s)	704, 903, 1422
NspI	RCATGY	3 cut(s)	556, 763, 1490
PciI	ACATGT	1 cut(s)	759
PciSI	GCTCTTC	1 cut(s)	1839
PctI	GAATGC	3 cut(s)	1164, 1626, 1723
PdmI	GAANNNNTTC	2 cut(s)	249, 1246
PfeI	GAWTC	3 cut(s)	134, 1694, 1927
PflFI	GACNNNGTC	1 cut(s)	73
PflMI	CCANNNNNTGG	1 cut(s)	1288
PfoI	TCCNGGA	2 cut(s)	595, 1612
PleI	GAGTC	5 cut(s)	405, 701, 1515, 1687, 2090
PpsI	GAGTC	5 cut(s)	405, 701, 1515, 1687, 2090
PscI	ACATGT	1 cut(s)	759
Psp6I	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
PspFI	CCCAGC	2 cut(s)	468, 723
PspGI	CCWGG	6 cut(s)	123, 378, 751, 883, 1281, 1612
PspN4I	GGNNCC	7 cut(s)	31, 48, 376, 528, 780, 1389, 1815
PspOMI	GGGCCC	2 cut(s)	29, 46
PspPI	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
PstI	CTGCAG	1 cut(s)	1593
PstNI	CAGNNNCTG	2 cut(s)	692, 1483
PsuI	RGATCY	2 cut(s)	599, 1367
PsyI	GACNNNGTC	1 cut(s)	73
PvuII	CAGCTG	1 cut(s)	1483
RsaI	GTAC	1 cut(s)	2016
RsaNI	GTAC	1 cut(s)	2015
RseI	CAYNNNNRTG	2 cut(s)	1169, 1784
SalI	GTCGAC	1 cut(s)	67
SapI	GCTCTTC	1 cut(s)	1839
SaqAI	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
Sau3AI	GATC	9 cut(s)	518, 544, 599, 822, 871, 1291, 1367, 1660, 2170
Sau96I	GGNCC	7 cut(s)	29, 30, 46, 47, 527, 670, 2057
SchI	GAGTC	5 cut(s)	406, 701, 1515, 1688, 2090
SduI	GDGCHC	5 cut(s)	33, 50, 802, 864, 976
SfaNI	GCATC	8 cut(s)	154, 626, 1152, 1197, 1332, 1718, 1964, 1966
SfcI	CTRYAG	2 cut(s)	1589, 1595
SfiI	GGCCNNNNNGGCC	1 cut(s)	54
SinI	GGWCC	2 cut(s)	670, 2057
SmiMI	CAYNNNNRTG	2 cut(s)	1169, 1784
SmlI	CTYRAG	4 cut(s)	857, 1523, 1548, 1583
SmoI	CTYRAG	4 cut(s)	857, 1523, 1548, 1583
Sse9I	AATT	5 cut(s)	218, 298, 631, 743, 1604
SsiI	CCGC	6 cut(s)	15, 27, 530, 1109, 1669, 2018
SspMI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
StyI	CCWWGG	3 cut(s)	673, 1462, 1824
TaaI	ACNGT	5 cut(s)	786, 921, 1105, 1266, 2014
TaiI	ACGT	2 cut(s)	74, 1897
TaqI	TCGA	5 cut(s)	68, 253, 710, 929, 1354
TaqII	GACCGA	1 cut(s)	711
TasI	AATT	5 cut(s)	218, 298, 631, 743, 1604
TauI	GCSGC	3 cut(s)	532, 1112, 1672
TfiI	GAWTC	3 cut(s)	134, 1694, 1927
Tru1I	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
Tru9I	TTAA	6 cut(s)	224, 422, 764, 899, 1149, 1494
TscAI	CASTG	3 cut(s)	924, 999, 2017
TseFI	GTSAC	3 cut(s)	704, 903, 1422
Tsp45I	GTSAC	3 cut(s)	704, 903, 1422
TspRI	CASTG	3 cut(s)	924, 999, 2017
Tth111I	GACNNNGTC	1 cut(s)	73
Van91I	CCANNNNNTGG	1 cut(s)	1288
VneI	GTGCAC	1 cut(s)	972
VpaK11BI	GGWCC	2 cut(s)	670, 2057
XagI	CCTNNNNNAGG	1 cut(s)	1617
XapI	RAATTY	1 cut(s)	631
XbaI	TCTAGA	1 cut(s)	194
XceI	RCATGY	3 cut(s)	556, 763, 1490
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1427
XmiI	GTMKAC	1 cut(s)	68
XmnI	GAANNNNTTC	2 cut(s)	249, 1246
XspI	CTAG	6 cut(s)	195, 342, 603, 1508, 2043, 2085
ZraI	GACGTC	1 cut(s)	72

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.