Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0002067

Physical Location & Seq

Genomic Coordinates Forward (+)

12258134 .. 12261850

Gene Structure 3717 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g11320.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGGTGAAGTTGCTGTGAGTGGTGGTGAGGGTAGGGAGGCTGTGAAGCTGGAGAAGAACGTGGAGGATGAGGATGGCGGTGGAGGAGGCAGTGGTGGTAGTGGTTCTGGGGAGTTGGTGAGCTGGGAGAGCAACCTGCCAAAATTGGTGCTCCGGGTTCTGCTGGTTGAAGCCGATGATTCGACGCGGCAGATCATCGCTGCGCTTCTCCGAAAATGCGGTTACAAAGTTGTTGCAGTCGGAGATGGATTAAAGGCGTGGGAGGTCATAAAGAGGAAACATCATAAGATGGATCTTATATTAACAGAGACAGAGCTGCCGTCGATTTCCGGATTCGCGCTCCTTACGTTAGTCATGGAACACGACATGTGCAAGAACATACCTGTAATAATGATGTCCTCTGAGGATTCAACTAGCAGGGTTTTGAAATGCATGCTGAAAGGTGCAGCTGACTATCTCATTAAGCCTGTAAGGCGGAATGAGCTGCGGAACCTTTGGCAGCATGTTTGGAGAAGGCAAACTAAAAAAGTCGAAGCCACTTGCGAGAACAATTTAGCAAGTAAACATTCAAATGGTTACGCAGCTTCCATGCAGGAAAATAAGGAATGCAGTGAGAAAGGAAGTGAAGCCCAAAGTTCTTGTACGACGCCTTACATGGAAGCTGAGAGTGGGTACATGCAAAATATGCAGGATATTCCACAGCTAAGGTATGAGAGTGCTTCTAATTTAAGCAATACAGATATGGAAAGGCTCAAGGAGTGTGCTAGACCGGACAACGAATCTGTTGTGCTTGAGAGTGAAGCAAAAGAGAAGTCAGGTACATTTGGATCATATGCTGTACCTTTGAAGGAAGGTTATACCTCAACTGGATTAAGACTCAGAGAGGACAATGTTTCTGCTACAAAAATGGTTCGAGGTGAAGGTATGCAACCGGAAAGTTACAAAGGAGATGCTAATATCACTTCTGAAACTCACATCAGCCGTTATGGACTGGATGAACCCTCCAGTGGAGCTATTGACTTTATTGGAGCCTTTGGTAATTGGCCAAAGTGCACTGCCGGACCCCCTGACAATAGAGACGACGGTACAAAGCACATGGGATCCACTCCACAACTGGAACTTTCTTTGAGAAGTTCTCTGGATGGTTCAAACAAGCAAGTGAACGATGAAAGGCCTGTGCTGAACCATTCTGATGCTTCTGCCTTTTCATGGTATAATAATAGCAAGACGTTGCAATCCTTTTTCCCAACATTTCCCATCACTGAATCGGAGGTTGCAAATAAATCCCATGATAGCCAGGAAAACATGTCTACCTTGGTTTCCGGTCAAACTGAGGAAGCTGATTTATGCTTTCCACGCTCTCAACTTGGGATGGTTCCTATCGCTGGGGCAAAGTCTGATAATATTTGCACTGCATACGGTCATTCTTTCCCATCCTTGTTTCATAGACAATCAGATGTAACCCCAACATGGAGTAGCAAATCGGCTTGCAATGGAGAACAATCCTCCTATCCTGTGAATTCCCCATATCATTCCAATCCTGAAGTTTACCTCTCAGAAGAAGGTTGTCACCTGTCTGACAAGACAACCTATAAATCTATTGGCCAGACTGTGCAGGGGCAGAACAACCAGGAGCAAATGGAGGAACTGAGACCTGGTTCGCCTGCTACTGGGCAAAGTGGCTGTAGTAGTTTAGGCAATGCTGTTGGTAATGCTGTTGGTCGCAGTGGACATGGAAGCAATTGTAGTAGCACTAATGGAAATGCCACTCTGGCTGTGTCTGGTGAGATGGAGGCTTCTGAGAGTTTGAATGACAGTGGTCGTTCTGTTCATGAGGGCTTTGGAGGAGCTGATCCTCTTCGTTCCAGCCAAAGGGAAGCAGCTCTGACCAAGTTCCGACTGAAGCGGAAAGATCGATGCTTTGAAAAGAAGGTCAGATACCAAAGCCGGAAAATACTAGCAGAGCAGCATCCCCGGGTGAAAGGTCAGTTTGTGCACCGAGCACGAACTAATGCTCCAACTGCCAATGCTGTTGGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0045892 GO:0045934 GO:0048511 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

681

Amino Acids

74.08

Weight (kDa)

5.94

Isoelectric Point (pI)

53.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46670 AT2G46790 AT2G46790 AT2G46790 AT2G46790 AT2G46790
fragaria_vesca	FvH4_7g17760 FvH4_7g17760 FvH4_7g17760 FvH4_7g17760 FvH4_7g17760
malus_domestica	MD01G1088900.v1.1
prunus_persica	Prupe.2G198500_v2.0.a1 Prupe.2G198500_v2.0.a1
pyrus_communis	pycom01g11320
rosa_chinensis	RchiOBHm_Chr1g0361151
rosa_laevigata	RLG00000027745
rosa_multiflora	Rmu_co8346237.1_g000001 Rmu_sc0000309.1_g000018 Rmu_sc0000427.1_g000034 Rmu_sc0001816.1_g000014 Rmu_sc0002872.1_g000001 Rmu_sc0006147.1_g000005 Rmu_sc0035862.1_g000001
rosa_roxburghii	Rroxscaffold_4G00295360 Rroxscaffold_6G00419120
rosa_rugosa	Rorug01G0286500 Rorug01G0286500 Rorug01G0286500 Rorug01G0286500
rosa_samantha	Rh1AG206100 Rh1AG297800 Rh1BG261800 Rh1CG191000 Rh1CG279200 Rh1DG291700 Rh2BG478900 Rh2DG487700 Rh2DG555300 Rh3AG290400 Rh4AG103700 Rh4AG103800 Rh4CG112000
rosa_wichuraiana	Rw1G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	144
AccI	GTMKAC	1 cut(s)	1310
AccII	CGCG	2 cut(s)	187, 338
AccIII	TCCGGA	1 cut(s)	329
AciI	CCGC	6 cut(s)	78, 187, 219, 475, 487, 1906
AclWI	GGATC	5 cut(s)	300, 835, 1095, 1108, 1847
AcoI	YGGCCR	2 cut(s)	1043, 1603
AcsI	RAATTY	1 cut(s)	1519
AcuI	CTGAAG	2 cut(s)	1563, 1922
AcyI	GRCGYC	1 cut(s)	647
AfaI	GTAC	5 cut(s)	643, 674, 820, 840, 1087
AfiI	CCNNNNNNNGG	6 cut(s)	1007, 1209, 1385, 1470, 1670, 1872
AflIII	ACRYGT	2 cut(s)	366, 1305
AgsI	TTSAA	8 cut(s)	170, 411, 427, 570, 847, 1149, 1810, 1925
AjnI	CCWGG	3 cut(s)	1296, 1629, 1654
AloI	GAACNNNNNNTCC	2 cut(s)	1999, 2031
Alw21I	GWGCWC	4 cut(s)	153, 1055, 1998, 2005
Alw26I	GTCTC	3 cut(s)	302, 1071, 1645
Alw44I	GTGCAC	2 cut(s)	1051, 1994
AlwI	GGATC	5 cut(s)	300, 835, 1095, 1108, 1847
Ama87I	CYCGRG	1 cut(s)	1974
Aor13HI	TCCGGA	1 cut(s)	329
AoxI	GGCC	3 cut(s)	1043, 1172, 1603
ApaLI	GTGCAC	2 cut(s)	1051, 1994
ApeKI	GCWGC	8 cut(s)	200, 316, 446, 484, 499, 581, 1880, 1966
ApoI	RAATTY	1 cut(s)	1519
ArsI	GACNNNNNNTTYG	2 cut(s)	797, 829
AspLEI	GCGC	2 cut(s)	205, 340
AspS9I	GGNCC	1 cut(s)	1061
AsuC2I	CCSGG	3 cut(s)	155, 1975, 1976
AsuHPI	GGTGA	7 cut(s)	17, 38, 130, 929, 1562, 1796, 1990
AvaI	CYCGRG	1 cut(s)	1974
AvaII	GGWCC	1 cut(s)	1061
BaeGI	GKGCMC	2 cut(s)	1055, 1998
BalI	TGGCCA	2 cut(s)	1045, 1605
BamHI	GGATCC	1 cut(s)	1100
BarI	GAAGNNNNNNTAC	2 cut(s)	1922, 1954
Bbv12I	GWGCWC	4 cut(s)	153, 1055, 1998, 2005
BbvI	GCAGC	8 cut(s)	187, 303, 458, 471, 511, 593, 1892, 1978
BccI	CCATC	8 cut(s)	68, 239, 283, 1136, 1265, 1366, 1441, 1783
BceAI	ACGGC	2 cut(s)	304, 966
BciT130I	CCWGG	3 cut(s)	1298, 1631, 1656
BcnI	CCSGG	3 cut(s)	155, 1975, 1976
BcoDI	GTCTC	3 cut(s)	302, 1071, 1645
BfaI	CTAG	3 cut(s)	414, 765, 1958
BfmI	CTRYAG	1 cut(s)	1684
BfuAI	ACCTGC	1 cut(s)	144
BglI	GCCNNNNNGGC	2 cut(s)	472, 1772
BisI	GCNGC	9 cut(s)	188, 201, 317, 447, 485, 500, 582, 1881, 1967
BlsI	GCNGC	9 cut(s)	189, 202, 318, 448, 486, 501, 583, 1882, 1968
Bme1390I	CCNGG	6 cut(s)	155, 1298, 1631, 1656, 1975, 1976
Bme18I	GGWCC	1 cut(s)	1061
BmeT110I	CYCGRG	1 cut(s)	1974
BmgT120I	GGNCC	1 cut(s)	1061
BmiI	GGNNCC	5 cut(s)	491, 1030, 1063, 1102, 1377
BmrFI	CCNGG	6 cut(s)	155, 1298, 1631, 1656, 1975, 1976
BmrI	ACTGGG	1 cut(s)	1680
BmsI	GCATC	4 cut(s)	940, 1183, 1907, 1978
BmuI	ACTGGG	1 cut(s)	1680
BoxI	GACNNNNGTC	1 cut(s)	1818
BplI	GAGNNNNNCTC	2 cut(s)	1120, 1152
BpmI	CTGGAG	2 cut(s)	71, 988
Bpu10I	CCTNAGC	1 cut(s)	704
BpuEI	CTTGAG	2 cut(s)	737, 812
BpuMI	CCSGG	3 cut(s)	155, 1975, 1976
Bsa29I	ATCGAT	1 cut(s)	1915
BsaHI	GRCGYC	1 cut(s)	647
BsaI	GGTCTC	1 cut(s)	1645
BsaJI	CCNNGG	3 cut(s)	1314, 1973, 1974
BsaWI	WCCGGW	4 cut(s)	329, 769, 931, 1322
BsaXI	ACNNNNNCTCC	2 cut(s)	1999, 2029
Bsc4I	CCNNNNNNNGG	6 cut(s)	1007, 1209, 1385, 1470, 1670, 1872
Bse1I	ACTGG	5 cut(s)	871, 996, 1005, 1119, 1675
Bse3DI	GCAATG	2 cut(s)	1498, 1705
BseAI	TCCGGA	1 cut(s)	329
BseBI	CCWGG	3 cut(s)	1298, 1631, 1656
BseCI	ATCGAT	1 cut(s)	1915
BseDI	CCNNGG	3 cut(s)	1314, 1973, 1974
BseGI	GGATG	7 cut(s)	73, 79, 1000, 1147, 1377, 1433, 1969
BseLI	CCNNNNNNNGG	6 cut(s)	1007, 1209, 1385, 1470, 1670, 1872
BseMI	GCAATG	2 cut(s)	1498, 1705
BseMII	CTCAG	7 cut(s)	393, 654, 892, 1323, 1569, 1640, 1791
BseNI	ACTGG	5 cut(s)	871, 996, 1005, 1119, 1675
BseRI	GAGGAG	2 cut(s)	99, 1860
BseSI	GKGCMC	2 cut(s)	1055, 1998
BseXI	GCAGC	8 cut(s)	187, 303, 458, 471, 511, 593, 1892, 1978
BseYI	CCCAGC	2 cut(s)	123, 1385
BsgI	GTGCAG	2 cut(s)	465, 1634
Bsh1236I	CGCG	2 cut(s)	187, 338
BshFI	GGCC	3 cut(s)	1045, 1174, 1605
BshVI	ATCGAT	1 cut(s)	1915
BsiHKAI	GWGCWC	4 cut(s)	153, 1055, 1998, 2005
BsiHKCI	CYCGRG	1 cut(s)	1974
BsiSI	CCGG	8 cut(s)	154, 330, 770, 932, 1059, 1323, 1948, 1975
BslI	CCNNNNNNNGG	6 cut(s)	1007, 1209, 1385, 1470, 1670, 1872
BsmAI	GTCTC	3 cut(s)	302, 1071, 1645
BsmBI	CGTCTC	1 cut(s)	1071
BsmI	GAATGC	1 cut(s)	611
BsnI	GGCC	3 cut(s)	1045, 1174, 1605
Bso31I	GGTCTC	1 cut(s)	1645
BsoBI	CYCGRG	1 cut(s)	1974
Bsp1286I	GDGCHC	4 cut(s)	153, 1055, 1998, 2005
Bsp13I	TCCGGA	1 cut(s)	329
Bsp143I	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
BspACI	CCGC	6 cut(s)	78, 187, 219, 475, 487, 1906
BspANI	GGCC	3 cut(s)	1045, 1174, 1605
BspCNI	CTCAG	7 cut(s)	394, 655, 891, 1324, 1568, 1641, 1792
BspDI	ATCGAT	1 cut(s)	1915
BspEI	TCCGGA	1 cut(s)	329
BspFNI	CGCG	2 cut(s)	187, 338
BspHI	TCATGA	1 cut(s)	1831
BspLI	GGNNCC	5 cut(s)	491, 1030, 1063, 1102, 1377
BspMI	ACCTGC	1 cut(s)	144
BspPI	GGATC	5 cut(s)	300, 835, 1095, 1108, 1847
BspTNI	GGTCTC	1 cut(s)	1645
BsrDI	GCAATG	2 cut(s)	1498, 1705
BsrI	ACTGG	5 cut(s)	871, 996, 1005, 1119, 1675
BssECI	CCNNGG	3 cut(s)	1314, 1973, 1974
BssMI	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
BssNI	GRCGYC	1 cut(s)	647
BssT1I	CCWWGG	1 cut(s)	1314
Bst2UI	CCWGG	3 cut(s)	1298, 1631, 1656
Bst4CI	ACNGT	4 cut(s)	1085, 1421, 1612, 1817
Bst6I	CTCTTC	1 cut(s)	1863
BstACI	GRCGYC	1 cut(s)	647
BstAPI	GCANNNNNTGC	1 cut(s)	685
BstC8I	GCNNGC	3 cut(s)	434, 1489, 1665
BstDEI	CTNAG	8 cut(s)	402, 663, 704, 878, 1332, 1555, 1649, 1800
BstF5I	GGATG	7 cut(s)	73, 79, 1000, 1147, 1377, 1433, 1969
BstFNI	CGCG	2 cut(s)	187, 338
BstHHI	GCGC	2 cut(s)	205, 340
BstKTI	GATC	6 cut(s)	195, 295, 830, 1103, 1855, 1915
BstMAI	GTCTC	3 cut(s)	302, 1071, 1645
BstMBI	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 472, 481, 685, 1356, 1772, 2021
BstNI	CCWGG	3 cut(s)	1298, 1631, 1656
BstNSI	RCATGY	5 cut(s)	370, 436, 506, 679, 1309
BstPAI	GACNNNNGTC	1 cut(s)	1818
BstSCI	CCNGG	6 cut(s)	153, 1296, 1629, 1654, 1973, 1974
BstSFI	CTRYAG	1 cut(s)	1684
BstSLI	GKGCMC	2 cut(s)	1055, 1998
BstUI	CGCG	2 cut(s)	187, 338
BstV1I	GCAGC	8 cut(s)	187, 303, 458, 471, 511, 593, 1892, 1978
BstX2I	RGATCY	2 cut(s)	292, 1100
BstYI	RGATCY	2 cut(s)	292, 1100
Bsu15I	ATCGAT	1 cut(s)	1915
BsuRI	GGCC	3 cut(s)	1045, 1174, 1605
BsuTUI	ATCGAT	1 cut(s)	1915
BtgZI	GCGATG	1 cut(s)	181
BtsCI	GGATG	7 cut(s)	73, 79, 1000, 1147, 1377, 1433, 1969
BtsI	GCAGTG	5 cut(s)	97, 616, 1053, 1410, 1732
BtsIMutI	CAGTG	8 cut(s)	97, 616, 1012, 1053, 1260, 1410, 1732, 1822
BveI	ACCTGC	1 cut(s)	144
Cac8I	GCNNGC	3 cut(s)	434, 1489, 1665
CciI	TCATGA	1 cut(s)	1831
CfoI	GCGC	2 cut(s)	205, 340
Cfr13I	GGNCC	1 cut(s)	1061
Cfr9I	CCCGGG	1 cut(s)	1974
ClaI	ATCGAT	1 cut(s)	1915
CseI	GACGC	2 cut(s)	193, 655
CsiI	ACCWGGT	1 cut(s)	1654
Csp6I	GTAC	5 cut(s)	642, 673, 819, 839, 1086
CviQI	GTAC	5 cut(s)	642, 673, 819, 839, 1086
DdeI	CTNAG	8 cut(s)	402, 663, 704, 878, 1332, 1555, 1649, 1800
DpnI	GATC	6 cut(s)	194, 294, 829, 1102, 1854, 1914
DpnII	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
EaeI	YGGCCR	2 cut(s)	1043, 1603
Eam1104I	CTCTTC	1 cut(s)	1863
EarI	CTCTTC	1 cut(s)	1863
EciI	GGCGGA	1 cut(s)	490
Eco130I	CCWWGG	1 cut(s)	1314
Eco147I	AGGCCT	1 cut(s)	1174
Eco31I	GGTCTC	1 cut(s)	1645
Eco47I	GGWCC	1 cut(s)	1061
Eco57I	CTGAAG	2 cut(s)	1563, 1922
Eco88I	CYCGRG	1 cut(s)	1974
EcoRI	GAATTC	1 cut(s)	1519
EcoRII	CCWGG	3 cut(s)	1296, 1629, 1654
EcoT14I	CCWWGG	1 cut(s)	1314
EcoT22I	ATGCAT	1 cut(s)	434
ErhI	CCWWGG	1 cut(s)	1314
Esp3I	CGTCTC	1 cut(s)	1071
FauNDI	CATATG	1 cut(s)	832
FblI	GTMKAC	1 cut(s)	1310
Fnu4HI	GCNGC	9 cut(s)	188, 201, 317, 447, 485, 500, 582, 1881, 1967
FokI	GGATG	7 cut(s)	80, 86, 1007, 1154, 1384, 1420, 1956
Fsp4HI	GCNGC	9 cut(s)	188, 201, 317, 447, 485, 500, 582, 1881, 1967
FspBI	CTAG	3 cut(s)	414, 765, 1958
GlaI	GCGC	2 cut(s)	204, 339
GluI	GCNGC	9 cut(s)	188, 201, 317, 447, 485, 500, 582, 1881, 1967
GsaI	CCCAGC	2 cut(s)	127, 1389
GsuI	CTGGAG	2 cut(s)	71, 988
HaeIII	GGCC	3 cut(s)	1045, 1174, 1605
HapII	CCGG	8 cut(s)	154, 330, 770, 932, 1059, 1323, 1948, 1975
HgaI	GACGC	2 cut(s)	193, 655
HhaI	GCGC	2 cut(s)	205, 340
Hin1I	GRCGYC	1 cut(s)	647
Hin6I	GCGC	2 cut(s)	203, 338
HinP1I	GCGC	2 cut(s)	203, 338
HinfI	GANTC	6 cut(s)	179, 333, 407, 779, 876, 1265
HpaII	CCGG	8 cut(s)	154, 330, 770, 932, 1059, 1323, 1948, 1975
HphI	GGTGA	7 cut(s)	17, 38, 130, 929, 1562, 1796, 1990
Hpy166II	GTNNAC	7 cut(s)	563, 1053, 1162, 1311, 1549, 1730, 1996
Hpy188III	TCNNGA	4 cut(s)	330, 1139, 1541, 1832
Hpy8I	GTNNAC	7 cut(s)	563, 1053, 1162, 1311, 1549, 1730, 1996
Hpy99I	CGWCG	4 cut(s)	187, 325, 649, 1085
HpyAV	CCTTC	6 cut(s)	507, 841, 845, 914, 1556, 1924
HpyCH4III	ACNGT	4 cut(s)	1085, 1421, 1612, 1817
HpyCH4IV	ACGT	3 cut(s)	60, 347, 1229
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 472, 481, 685, 1356, 1772, 2021
HpyF3I	CTNAG	8 cut(s)	402, 663, 704, 878, 1332, 1555, 1649, 1800
HpySE526I	ACGT	3 cut(s)	60, 347, 1229
Hsp92I	GRCGYC	1 cut(s)	647
HspAI	GCGC	2 cut(s)	203, 338
Kpn2I	TCCGGA	1 cut(s)	329
Kzo9I	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
LmnI	GCTCC	7 cut(s)	156, 345, 1010, 1028, 1633, 1847, 2020
Lsp1109I	GCAGC	8 cut(s)	187, 303, 458, 471, 511, 593, 1892, 1978
LweI	GCATC	4 cut(s)	940, 1183, 1907, 1978
MabI	ACCWGGT	1 cut(s)	1654
MaeI	CTAG	3 cut(s)	414, 765, 1958
MaeII	ACGT	3 cut(s)	60, 347, 1229
MaeIII	GTNAC	5 cut(s)	221, 575, 938, 1459, 1568
MalI	GATC	6 cut(s)	194, 294, 829, 1102, 1854, 1914
MboI	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
MboII	GAAGA	3 cut(s)	67, 1571, 1850
MfeI	CAATTG	1 cut(s)	1741
MflI	RGATCY	2 cut(s)	292, 1100
MhlI	GDGCHC	4 cut(s)	153, 1055, 1998, 2005
MlsI	TGGCCA	2 cut(s)	1045, 1605
MluCI	AATT	6 cut(s)	143, 550, 724, 1039, 1519, 1741
MluNI	TGGCCA	2 cut(s)	1045, 1605
MlyI	GAGTC	1 cut(s)	870
MmeI	TCCRAC	3 cut(s)	220, 1921, 2042
Mox20I	TGGCCA	2 cut(s)	1045, 1605
Mph1103I	ATGCAT	1 cut(s)	434
MroI	TCCGGA	1 cut(s)	329
MscI	TGGCCA	2 cut(s)	1045, 1605
MseI	TTAA	5 cut(s)	251, 302, 462, 728, 872
MslI	CAYNNNNRTG	2 cut(s)	570, 1191
Msp20I	TGGCCA	2 cut(s)	1045, 1605
MspA1I	CMGCKG	1 cut(s)	449
MspI	CCGG	8 cut(s)	154, 330, 770, 932, 1059, 1323, 1948, 1975
MspR9I	CCNGG	6 cut(s)	155, 1298, 1631, 1656, 1975, 1976
MunI	CAATTG	1 cut(s)	1741
Mva1269I	GAATGC	1 cut(s)	611
MvaI	CCWGG	3 cut(s)	1298, 1631, 1656
MvnI	CGCG	2 cut(s)	187, 338
MwoI	GCNNNNNNNGC	7 cut(s)	129, 472, 481, 685, 1356, 1772, 2021
NciI	CCSGG	3 cut(s)	155, 1975, 1976
NdeI	CATATG	1 cut(s)	832
NdeII	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
NlaIV	GGNNCC	5 cut(s)	491, 1030, 1063, 1102, 1377
NmuCI	GTSAC	1 cut(s)	1568
NsiI	ATGCAT	1 cut(s)	434
NspI	RCATGY	5 cut(s)	370, 436, 506, 679, 1309
PaeI	GCATGC	1 cut(s)	436
PagI	TCATGA	1 cut(s)	1831
PceI	AGGCCT	1 cut(s)	1174
PciI	ACATGT	2 cut(s)	366, 1305
PctI	GAATGC	1 cut(s)	611
PfeI	GAWTC	5 cut(s)	179, 333, 407, 779, 1265
PkrI	GCNGC	9 cut(s)	189, 202, 318, 448, 486, 501, 583, 1882, 1968
PleI	GAGTC	1 cut(s)	870
PpsI	GAGTC	1 cut(s)	870
PscI	ACATGT	2 cut(s)	366, 1305
PshAI	GACNNNNGTC	1 cut(s)	1818
Psp6I	CCWGG	3 cut(s)	1296, 1629, 1654
PspFI	CCCAGC	2 cut(s)	123, 1385
PspGI	CCWGG	3 cut(s)	1296, 1629, 1654
PspN4I	GGNNCC	5 cut(s)	491, 1030, 1063, 1102, 1377
PspPI	GGNCC	1 cut(s)	1061
PsuI	RGATCY	2 cut(s)	292, 1100
PvuII	CAGCTG	1 cut(s)	449
RsaI	GTAC	5 cut(s)	643, 674, 820, 840, 1087
RsaNI	GTAC	5 cut(s)	642, 673, 819, 839, 1086
RseI	CAYNNNNRTG	2 cut(s)	570, 1191
SaqAI	TTAA	5 cut(s)	251, 302, 462, 728, 872
SatI	GCNGC	9 cut(s)	188, 201, 317, 447, 485, 500, 582, 1881, 1967
Sau3AI	GATC	6 cut(s)	192, 292, 827, 1100, 1852, 1912
Sau96I	GGNCC	1 cut(s)	1061
SchI	GAGTC	1 cut(s)	870
ScrFI	CCNGG	6 cut(s)	155, 1298, 1631, 1656, 1975, 1976
SduI	GDGCHC	4 cut(s)	153, 1055, 1998, 2005
SexAI	ACCWGGT	1 cut(s)	1654
SfaNI	GCATC	4 cut(s)	940, 1183, 1907, 1978
SfcI	CTRYAG	1 cut(s)	1684
SinI	GGWCC	1 cut(s)	1061
SmaI	CCCGGG	1 cut(s)	1976
SmiMI	CAYNNNNRTG	2 cut(s)	570, 1191
SmlI	CTYRAG	2 cut(s)	752, 791
SmoI	CTYRAG	2 cut(s)	752, 791
SphI	GCATGC	1 cut(s)	436
Sse9I	AATT	6 cut(s)	143, 550, 724, 1039, 1519, 1741
SseBI	AGGCCT	1 cut(s)	1174
SsiI	CCGC	6 cut(s)	78, 187, 219, 475, 487, 1906
SspI	AATATT	1 cut(s)	1405
SspMI	CTAG	3 cut(s)	414, 765, 1958
StuI	AGGCCT	1 cut(s)	1174
StyD4I	CCNGG	6 cut(s)	153, 1296, 1629, 1654, 1973, 1974
StyI	CCWWGG	1 cut(s)	1314
TaaI	ACNGT	4 cut(s)	1085, 1421, 1612, 1817
TaiI	ACGT	3 cut(s)	63, 350, 1232
TaqI	TCGA	5 cut(s)	182, 323, 531, 913, 1915
TasI	AATT	6 cut(s)	143, 550, 724, 1039, 1519, 1741
TauI	GCSGC	1 cut(s)	190
TfiI	GAWTC	5 cut(s)	179, 333, 407, 779, 1265
Tru1I	TTAA	5 cut(s)	251, 302, 462, 728, 872
Tru9I	TTAA	5 cut(s)	251, 302, 462, 728, 872
TscAI	CASTG	8 cut(s)	97, 616, 1012, 1060, 1267, 1417, 1732, 1822
TseFI	GTSAC	1 cut(s)	1568
TseI	GCWGC	8 cut(s)	200, 316, 446, 484, 499, 581, 1880, 1966
Tsp45I	GTSAC	1 cut(s)	1568
TspDTI	ATGAA	5 cut(s)	1011, 1182, 1197, 1433, 1820
TspMI	CCCGGG	1 cut(s)	1974
TspRI	CASTG	8 cut(s)	97, 616, 1012, 1060, 1267, 1417, 1732, 1822
VneI	GTGCAC	2 cut(s)	1051, 1994
VpaK11BI	GGWCC	1 cut(s)	1061
XapI	RAATTY	1 cut(s)	1519
XceI	RCATGY	5 cut(s)	370, 436, 506, 679, 1309
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1111
XmaI	CCCGGG	1 cut(s)	1974
XmiI	GTMKAC	1 cut(s)	1310
XspI	CTAG	3 cut(s)	414, 765, 1958
Zsp2I	ATGCAT	1 cut(s)	434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.