Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002067

Physical Location & Seq

Genomic Coordinates Forward (+)

53454054 .. 53458517

Gene Structure 4464 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G026320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGGTGGGTGAAATGGAGGCGGTAAAAATTGAGAGGAAGGAGGAGGAGGAAGAGGGTGGTGGGAGCTCCACAGAGGTGGTGAGCTGGGGGAACTATCTTCCCACCAATGTGCTGAGGGTTCTATTGGTTGAAGCTGATGACTCTACTCGTCAGATTATCACTGCTCTTCTTCGAAAATGCAATTACAGAGTTGTTTCGGTTTCTGATGGATTGAGGGCGTGGGAGACGATAAAGGTGAAGCATAATAAGATAGACCTTATTCTGACTGAGGCAGAGTTGCCATCGATATCTGGATTTGCGCTTCTTACTTTGGTGATGGAGCATGATATTTGCAAGCACATACCTGTTATAATGATGTCGTCTCAAGACTCTGTGAATATGGTTTTGAAGTGCATGCAAAAAGGGGCCGCCGACTATCTGATTAAGCCGGTCAGGAGGAATGAGCTGAGGAACCTTTGGCAACATGTGTGGAGAAGGCACACTCTAGCTAGTGGACAAGCTCCTCAGAACTTAACAGTTTCACAACAAAAAGTTGAAGCCACTTCGGAAAATAATGCAGCAAGTAATCATTCAAATGACTATGCTGCTTGTACGCGCAAAACTAAGGGATTCAGTCAGAAAGCAAGTGATGCCCAAAACTCCTGTACAACTCCTTACTTGGAAGCTGAAAGTGCATGCATTCAAAATATGCAGGATATATCGCAGCTAAAGTATGGCAGTGCTTCTAATTTGAGCAATACAGATATTGAAATGCTTGAAGATTGTGATAGATTGGACAATGAATCTGTTGTGCATGAGAGTGAAACTAAAGAGAATTCAGGTACATTTGGGTCAGATATTGTACCTTTGGATGAAGCACTTAACTCAGTTGCCTCAAGACTCAGAGAGGAAAATGTTTCTGCTAAAACAATGGTTCAAGATGAAGGTATCCAAGCAGAAATTTTTGAAGAAAAAGCTAAAACTGCTAGTGGCACTCACAGCCTCCAATATGAGGTTGAACCCTCAGTTGGGGTCAGGGACTTGCTTTGCACCTTTGACAATTGGCCCAACTGCAACATTGGAAGTTCTAACAGAAAAAATGATGGTATGAAGCACTTTGGATTGGAACTGTCTTTAAGAAGTTCAGATGGTTCACACAAGGAAGTGACTGAGGAGAGGTCTGCACTGAAACAATCTGATGCCTCTGCCTTTTCACGGTATAATAATAGCAAGGGACTGCAACCCCTTTTCCCGACATTTCCCAGTACAAAATCGGAGGATGCAAGCAATTCACATGATAGACAGGACAATATGGTAAACTTTGTTGATGGTCAAACTGAGCAAGCTGATTCATCCATCCGAGGCCCTCAACTTGGGGTGTTTCCTGTCACTAGTGTAAGGTCTGAGAATATGTGTGCTGGATACAGTCATTATTTCCCATCCTTGTTTCTTGGACAATCGGATTTGACCCCTATGTTCAGTATCAAATCAGTTGGCCAGAGCACACAATCCACCTTTCACTCAGAACAAGGTTATGACGAGTCTGATAAAACTACTGATAAATCTATTGACGAAACCCTGCATGAGCAGAACAAACTGGAGAATGTGGAGCATTTGAAACCTGGTTCTCCTGCAGCTTCTCAGAGTGGTTGTAGTAGTTTAGGCAATGGTACTGTTGATAATCATATTAGTGGCGGCGCATATGGAAGCATTTGCAGTAGCAATGATGGAAAGGCCAGTTTGGCTGTAGCAGGTGAGATGGCCACAGCTTCTGAGAGTTTGAATGACAATGGTCGCTATGTTCGTGAGGGATCTGGAGTGGATTCTCTTCGTTCCAGCCAAAGGGAAGCAGCTCTGACCAAGTTCCGACTGAAGCGGAAAGATAGATGCTTTGAGAAGAAGGTTAGATACCAAAGCCGGAAAATACTGGCAGAGAAGCGGCCAAGAGTGAAAGGTCAATTCGTGCATAGAGCTCATACTGATCCTCCAACTGCCAATGCTGTTGGTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0045892 GO:0045934 GO:0048511 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

663

Amino Acids

73.0

Weight (kDa)

5.61

Isoelectric Point (pI)

50.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	40 - 151	1e-21	Response regulator receiver domain
CCT	PF06203	608 - 649	7.9e-17	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46670 AT2G46790 AT2G46790 AT2G46790 AT2G46790 AT2G46790
fragaria_vesca	FvH4_7g17760 FvH4_7g17760 FvH4_7g17760 FvH4_7g17760 FvH4_7g17760
malus_domestica	MD01G1088900.v1.1
prunus_persica	Prupe.2G198500_v2.0.a1 Prupe.2G198500_v2.0.a1
pyrus_communis	pycom01g11320
rosa_chinensis	RchiOBHm_Chr1g0361151
rosa_laevigata	RLG00000027745
rosa_multiflora	Rmu_co8346237.1_g000001 Rmu_sc0000309.1_g000018 Rmu_sc0000427.1_g000034 Rmu_sc0001816.1_g000014 Rmu_sc0002872.1_g000001 Rmu_sc0006147.1_g000005 Rmu_sc0035862.1_g000001
rosa_roxburghii	Rroxscaffold_4G00295360 Rroxscaffold_6G00419120
rosa_rugosa	Rorug01G0286500 Rorug01G0286500 Rorug01G0286500 Rorug01G0286500
rosa_samantha	Rh1AG206100 Rh1AG297800 Rh1BG261800 Rh1CG191000 Rh1CG279200 Rh1DG291700 Rh2BG478900 Rh2DG487700 Rh2DG555300 Rh3AG290400 Rh4AG103700 Rh4AG103800 Rh4CG112000
rosa_wichuraiana	Rw1G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	350
AarI	CACCTGC	1 cut(s)	1721
Acc36I	ACCTGC	1 cut(s)	1721
AccII	CGCG	1 cut(s)	595
AciI	CCGC	5 cut(s)	20, 408, 1674, 1855, 1918
AclWI	GGATC	2 cut(s)	1798, 1955
AcoI	YGGCCR	3 cut(s)	1474, 1740, 1919
AcsI	RAATTY	2 cut(s)	814, 939
AcuI	CTGAAG	1 cut(s)	1871
AfaI	GTAC	6 cut(s)	592, 646, 823, 843, 1246, 1651
AfiI	CCNNNNNNNGG	6 cut(s)	991, 1007, 1008, 1194, 1352, 1821
AflIII	ACRYGT	1 cut(s)	463
AhlI	ACTAGT	1 cut(s)	1370
AjnI	CCWGG	1 cut(s)	1600
AjuI	GAANNNNNNNTTGG	2 cut(s)	990, 1022
AleI	CACNNNNGTG	2 cut(s)	74, 107
Alw21I	GWGCWC	3 cut(s)	68, 1484, 1954
Alw26I	GTCTC	2 cut(s)	218, 366
AlwI	GGATC	2 cut(s)	1798, 1955
AlwNI	CAGNNNCTG	1 cut(s)	1751
AoxI	GGCC	7 cut(s)	405, 1043, 1342, 1474, 1713, 1740, 1919
ApeKI	GCWGC	5 cut(s)	557, 584, 703, 1613, 1829
ApoI	RAATTY	2 cut(s)	814, 939
AspLEI	GCGC	3 cut(s)	301, 597, 1679
AspS9I	GGNCC	3 cut(s)	405, 1044, 1343
AsuHPI	GGTGA	5 cut(s)	20, 91, 247, 325, 1745
AsuII	TTCGAA	1 cut(s)	172
BalI	TGGCCA	2 cut(s)	1476, 1742
BanII	GRGCYC	2 cut(s)	68, 1954
BarI	GAAGNNNNNNTAC	2 cut(s)	1871, 1903
Bbv12I	GWGCWC	3 cut(s)	68, 1484, 1954
BbvCI	CCTCAGC	2 cut(s)	113, 446
BbvI	GCAGC	5 cut(s)	569, 571, 715, 1625, 1841
BciT130I	CCWGG	1 cut(s)	1602
BciVI	GTATCC	2 cut(s)	938, 1394
BcoDI	GTCTC	2 cut(s)	218, 366
BcuI	ACTAGT	1 cut(s)	1370
BfaI	CTAG	4 cut(s)	485, 489, 966, 1371
BfmI	CTRYAG	2 cut(s)	1611, 1725
BfuAI	ACCTGC	1 cut(s)	1721
BfuI	GTATCC	2 cut(s)	938, 1394
BglI	GCCNNNNNGGC	1 cut(s)	1721
BisI	GCNGC	8 cut(s)	408, 558, 585, 704, 1614, 1675, 1830, 1919
BlsI	GCNGC	8 cut(s)	409, 559, 586, 705, 1615, 1676, 1831, 1920
Bme1390I	CCNGG	1 cut(s)	1602
BmgT120I	GGNCC	3 cut(s)	405, 1044, 1343
BmiI	GGNNCC	2 cut(s)	406, 452
BmrFI	CCNGG	1 cut(s)	1602
BmrI	ACTGGG	1 cut(s)	1236
BmsI	GCATC	4 cut(s)	619, 1168, 1249, 1856
BmuI	ACTGGG	1 cut(s)	1236
BoxI	GACNNNNGTC	1 cut(s)	1770
BpmI	CTGGAG	2 cut(s)	1598, 1815
Bpu10I	CCTNAGC	2 cut(s)	113, 446
Bpu14I	TTCGAA	1 cut(s)	172
BpuEI	CTTGAG	2 cut(s)	348, 859
Bsa29I	ATCGAT	1 cut(s)	284
BsaJI	CCNNGG	1 cut(s)	1339
BsaXI	ACNNNNNCTCC	2 cut(s)	1948, 1978
Bsc4I	CCNNNNNNNGG	6 cut(s)	991, 1007, 1008, 1194, 1352, 1821
Bse118I	RCCGGY	1 cut(s)	427
Bse1I	ACTGG	4 cut(s)	1242, 1581, 1716, 1911
Bse3DI	GCAATG	2 cut(s)	1651, 1708
BseBI	CCWGG	1 cut(s)	1602
BseCI	ATCGAT	1 cut(s)	284
BseDI	CCNNGG	1 cut(s)	1339
BseGI	GGATG	5 cut(s)	856, 1264, 1331, 1335, 1418
BseLI	CCNNNNNNNGG	6 cut(s)	991, 1007, 1008, 1194, 1352, 1821
BseMI	GCAATG	2 cut(s)	1651, 1708
BseNI	ACTGG	4 cut(s)	1242, 1581, 1716, 1911
BseRI	GAGGAG	4 cut(s)	56, 59, 492, 1166
BseXI	GCAGC	5 cut(s)	569, 571, 715, 1625, 1841
BseYI	CCCAGC	1 cut(s)	84
BsgI	GTGCAG	1 cut(s)	1146
Bsh1236I	CGCG	1 cut(s)	595
BshFI	GGCC	7 cut(s)	407, 1045, 1344, 1476, 1715, 1742, 1921
BshVI	ATCGAT	1 cut(s)	284
BsiHKAI	GWGCWC	3 cut(s)	68, 1484, 1954
BsiSI	CCGG	2 cut(s)	428, 1897
BslFI	GGGAC	2 cut(s)	1031, 1227
BslI	CCNNNNNNNGG	6 cut(s)	991, 1007, 1008, 1194, 1352, 1821
BsmAI	GTCTC	2 cut(s)	218, 366
BsmBI	CGTCTC	2 cut(s)	218, 366
BsmFI	GGGAC	2 cut(s)	1031, 1227
BsmI	GAATGC	1 cut(s)	678
BsnI	GGCC	7 cut(s)	407, 1045, 1344, 1476, 1715, 1742, 1921
Bsp119I	TTCGAA	1 cut(s)	172
Bsp1286I	GDGCHC	3 cut(s)	68, 1484, 1954
Bsp1407I	TGTACA	1 cut(s)	644
Bsp143I	GATC	2 cut(s)	1790, 1960
BspACI	CCGC	5 cut(s)	20, 408, 1674, 1855, 1918
BspANI	GGCC	7 cut(s)	407, 1045, 1344, 1476, 1715, 1742, 1921
BspDI	ATCGAT	1 cut(s)	284
BspFNI	CGCG	1 cut(s)	595
BspHI	TCATGA	1 cut(s)	1988
BspLI	GGNNCC	2 cut(s)	406, 452
BspMAI	CTGCAG	1 cut(s)	1615
BspMI	ACCTGC	1 cut(s)	1721
BspPI	GGATC	2 cut(s)	1798, 1955
BspQI	GCTCTTC	1 cut(s)	171
BspT104I	TTCGAA	1 cut(s)	172
BsrDI	GCAATG	2 cut(s)	1651, 1708
BsrFI	RCCGGY	1 cut(s)	427
BsrGI	TGTACA	1 cut(s)	644
BsrI	ACTGG	4 cut(s)	1242, 1581, 1716, 1911
BssAI	RCCGGY	1 cut(s)	427
BssECI	CCNNGG	1 cut(s)	1339
BssMI	GATC	2 cut(s)	1790, 1960
Bst2UI	CCWGG	1 cut(s)	1602
Bst4CI	ACNGT	5 cut(s)	517, 1110, 1197, 1406, 1654
Bst6I	CTCTTC	3 cut(s)	45, 171, 1812
BstAPI	GCANNNNNTGC	1 cut(s)	629
BstAUI	TGTACA	1 cut(s)	644
BstBI	TTCGAA	1 cut(s)	172
BstC8I	GCNNGC	5 cut(s)	335, 395, 676, 1264, 1323
BstF5I	GGATG	5 cut(s)	856, 1264, 1331, 1335, 1418
BstFNI	CGCG	1 cut(s)	595
BstHHI	GCGC	3 cut(s)	301, 597, 1679
BstKTI	GATC	2 cut(s)	1793, 1963
BstMAI	GTCTC	2 cut(s)	218, 366
BstMBI	GATC	2 cut(s)	1790, 1960
BstMWI	GCNNNNNNNGC	5 cut(s)	629, 671, 962, 978, 1721
BstNI	CCWGG	1 cut(s)	1602
BstNSI	RCATGY	3 cut(s)	397, 467, 678
BstPAI	GACNNNNGTC	1 cut(s)	1770
BstSCI	CCNGG	1 cut(s)	1600
BstSFI	CTRYAG	2 cut(s)	1611, 1725
BstUI	CGCG	1 cut(s)	595
BstV1I	GCAGC	5 cut(s)	569, 571, 715, 1625, 1841
BstX2I	RGATCY	1 cut(s)	1790
BstXI	CCANNNNNNTGG	1 cut(s)	76
BstYI	RGATCY	1 cut(s)	1790
Bsu15I	ATCGAT	1 cut(s)	284
BsuI	GTATCC	2 cut(s)	938, 1394
BsuRI	GGCC	7 cut(s)	407, 1045, 1344, 1476, 1715, 1742, 1921
BsuTUI	ATCGAT	1 cut(s)	284
BtsCI	GGATG	5 cut(s)	856, 1264, 1331, 1335, 1418
BtsI	GCAGTG	2 cut(s)	159, 724
BtsIMutI	CAGTG	3 cut(s)	159, 724, 1163
BveI	ACCTGC	1 cut(s)	1721
Cac8I	GCNNGC	5 cut(s)	335, 395, 676, 1264, 1323
CaiI	CAGNNNCTG	1 cut(s)	1751
CciI	TCATGA	1 cut(s)	1988
CfoI	GCGC	3 cut(s)	301, 597, 1679
Cfr10I	RCCGGY	1 cut(s)	427
Cfr13I	GGNCC	3 cut(s)	405, 1044, 1343
ClaI	ATCGAT	1 cut(s)	284
CsiI	ACCWGGT	1 cut(s)	1600
Csp6I	GTAC	6 cut(s)	591, 645, 822, 842, 1245, 1650
CspCI	CAANNNNNGTGG	2 cut(s)	449, 484
CviAII	CATG	8 cut(s)	323, 394, 464, 675, 794, 1274, 1562, 1989
CviQI	GTAC	6 cut(s)	591, 645, 822, 842, 1245, 1650
DpnI	GATC	2 cut(s)	1792, 1962
DpnII	GATC	2 cut(s)	1790, 1960
EaeI	YGGCCR	3 cut(s)	1474, 1740, 1919
Eam1104I	CTCTTC	3 cut(s)	45, 171, 1812
EarI	CTCTTC	3 cut(s)	45, 171, 1812
Ecl136II	GAGCTC	2 cut(s)	66, 1952
Eco24I	GRGCYC	2 cut(s)	68, 1954
Eco32I	GATATC	1 cut(s)	288
Eco53kI	GAGCTC	2 cut(s)	66, 1952
Eco57I	CTGAAG	1 cut(s)	1871
EcoICRI	GAGCTC	2 cut(s)	66, 1952
EcoO109I	RGGNCCY	1 cut(s)	1343
EcoRI	GAATTC	1 cut(s)	814
EcoRII	CCWGG	1 cut(s)	1600
EcoRV	GATATC	1 cut(s)	288
EcoT22I	ATGCAT	1 cut(s)	680
EcoT38I	GRGCYC	2 cut(s)	68, 1954
Esp3I	CGTCTC	2 cut(s)	218, 366
FaeI	CATG	8 cut(s)	326, 397, 467, 678, 797, 1277, 1565, 1992
FaqI	GGGAC	2 cut(s)	1031, 1227
FatI	CATG	8 cut(s)	322, 393, 463, 674, 793, 1273, 1561, 1988
FauNDI	CATATG	1 cut(s)	1681
Fnu4HI	GCNGC	8 cut(s)	408, 558, 585, 704, 1614, 1675, 1830, 1919
FokI	GGATG	5 cut(s)	863, 1271, 1318, 1322, 1405
FriOI	GRGCYC	2 cut(s)	68, 1954
Fsp4HI	GCNGC	8 cut(s)	408, 558, 585, 704, 1614, 1675, 1830, 1919
FspBI	CTAG	4 cut(s)	485, 489, 966, 1371
GlaI	GCGC	3 cut(s)	300, 596, 1678
GluI	GCNGC	8 cut(s)	408, 558, 585, 704, 1614, 1675, 1830, 1919
GsaI	CCCAGC	1 cut(s)	88
GsuI	CTGGAG	2 cut(s)	1598, 1815
HaeIII	GGCC	7 cut(s)	407, 1045, 1344, 1476, 1715, 1742, 1921
HapII	CCGG	2 cut(s)	428, 1897
HhaI	GCGC	3 cut(s)	301, 597, 1679
Hin1II	CATG	8 cut(s)	326, 397, 467, 678, 797, 1277, 1565, 1992
Hin6I	GCGC	3 cut(s)	299, 595, 1677
HinP1I	GCGC	3 cut(s)	299, 595, 1677
HinfI	GANTC	8 cut(s)	140, 368, 609, 782, 879, 1328, 1520, 1802
HpaII	CCGG	2 cut(s)	428, 1897
HphI	GGTGA	5 cut(s)	20, 91, 247, 325, 1745
Hpy166II	GTNNAC	3 cut(s)	494, 1133, 1297
Hpy188III	TCNNGA	9 cut(s)	291, 365, 433, 876, 917, 1231, 1784, 1794, 1989
Hpy8I	GTNNAC	3 cut(s)	494, 1133, 1297
HpyAV	CCTTC	4 cut(s)	31, 468, 917, 1873
HpyCH4III	ACNGT	5 cut(s)	517, 1110, 1197, 1406, 1654
HpyF10VI	GCNNNNNNNGC	5 cut(s)	629, 671, 962, 978, 1721
Hsp92II	CATG	8 cut(s)	326, 397, 467, 678, 797, 1277, 1565, 1992
HspAI	GCGC	3 cut(s)	299, 595, 1677
Kzo9I	GATC	2 cut(s)	1790, 1960
LguI	GCTCTTC	1 cut(s)	171
LmnI	GCTCC	5 cut(s)	63, 71, 319, 505, 1588
Lsp1109I	GCAGC	5 cut(s)	569, 571, 715, 1625, 1841
LweI	GCATC	4 cut(s)	619, 1168, 1249, 1856
MabI	ACCWGGT	1 cut(s)	1600
MaeI	CTAG	4 cut(s)	485, 489, 966, 1371
MaeIII	GTNAC	2 cut(s)	1144, 1366
MalI	GATC	2 cut(s)	1792, 1962
MboI	GATC	2 cut(s)	1790, 1960
MboII	GAAGA	8 cut(s)	62, 89, 158, 161, 770, 959, 1799, 1888
MfeI	CAATTG	1 cut(s)	1039
MflI	RGATCY	1 cut(s)	1790
MhlI	GDGCHC	3 cut(s)	68, 1484, 1954
MlsI	TGGCCA	2 cut(s)	1476, 1742
MluCI	AATT	8 cut(s)	27, 181, 727, 814, 939, 1039, 1267, 1937
MluNI	TGGCCA	2 cut(s)	1476, 1742
MlyI	GAGTC	4 cut(s)	134, 362, 873, 1529
MmeI	TCCRAC	2 cut(s)	1870, 1991
Mox20I	TGGCCA	2 cut(s)	1476, 1742
Mph1103I	ATGCAT	1 cut(s)	680
MscI	TGGCCA	2 cut(s)	1476, 1742
MseI	TTAA	4 cut(s)	423, 512, 861, 1115
MslI	CAYNNNNRTG	5 cut(s)	74, 107, 573, 798, 1668
Msp20I	TGGCCA	2 cut(s)	1476, 1742
MspI	CCGG	2 cut(s)	428, 1897
MspR9I	CCNGG	1 cut(s)	1602
MunI	CAATTG	1 cut(s)	1039
Mva1269I	GAATGC	1 cut(s)	678
MvaI	CCWGG	1 cut(s)	1602
MvnI	CGCG	1 cut(s)	595
MwoI	GCNNNNNNNGC	5 cut(s)	629, 671, 962, 978, 1721
NdeI	CATATG	1 cut(s)	1681
NdeII	GATC	2 cut(s)	1790, 1960
NlaIII	CATG	8 cut(s)	326, 397, 467, 678, 797, 1277, 1565, 1992
NlaIV	GGNNCC	2 cut(s)	406, 452
NmuCI	GTSAC	2 cut(s)	1144, 1366
NsiI	ATGCAT	1 cut(s)	680
NspI	RCATGY	3 cut(s)	397, 467, 678
NspV	TTCGAA	1 cut(s)	172
OliI	CACNNNNGTG	2 cut(s)	74, 107
PaeI	GCATGC	2 cut(s)	397, 678
PagI	TCATGA	1 cut(s)	1988
PaqCI	CACCTGC	1 cut(s)	1721
PciI	ACATGT	1 cut(s)	463
PciSI	GCTCTTC	1 cut(s)	171
PcsI	WCGNNNNNNNCGW	1 cut(s)	1780
PctI	GAATGC	1 cut(s)	678
PfeI	GAWTC	4 cut(s)	609, 782, 1328, 1802
PkrI	GCNGC	8 cut(s)	409, 559, 586, 705, 1615, 1676, 1831, 1920
PleI	GAGTC	4 cut(s)	134, 362, 873, 1528
PpsI	GAGTC	4 cut(s)	134, 362, 873, 1528
PscI	ACATGT	1 cut(s)	463
PshAI	GACNNNNGTC	1 cut(s)	1770
PsiI	TTATAA	1 cut(s)	350
Psp124BI	GAGCTC	2 cut(s)	68, 1954
Psp6I	CCWGG	1 cut(s)	1600
PspFI	CCCAGC	1 cut(s)	84
PspGI	CCWGG	1 cut(s)	1600
PspN4I	GGNNCC	2 cut(s)	406, 452
PspPI	GGNCC	3 cut(s)	405, 1044, 1343
PstI	CTGCAG	1 cut(s)	1615
PstNI	CAGNNNCTG	1 cut(s)	1751
PsuI	RGATCY	1 cut(s)	1790
RsaI	GTAC	6 cut(s)	592, 646, 823, 843, 1246, 1651
RsaNI	GTAC	6 cut(s)	591, 645, 822, 842, 1245, 1650
RseI	CAYNNNNRTG	5 cut(s)	74, 107, 573, 798, 1668
SacI	GAGCTC	2 cut(s)	68, 1954
SapI	GCTCTTC	1 cut(s)	171
SaqAI	TTAA	4 cut(s)	423, 512, 861, 1115
SatI	GCNGC	8 cut(s)	408, 558, 585, 704, 1614, 1675, 1830, 1919
Sau3AI	GATC	2 cut(s)	1790, 1960
Sau96I	GGNCC	3 cut(s)	405, 1044, 1343
SchI	GAGTC	4 cut(s)	134, 362, 873, 1529
ScrFI	CCNGG	1 cut(s)	1602
SduI	GDGCHC	3 cut(s)	68, 1484, 1954
SexAI	ACCWGGT	1 cut(s)	1600
SfaNI	GCATC	4 cut(s)	619, 1168, 1249, 1856
SfcI	CTRYAG	2 cut(s)	1611, 1725
SfuI	TTCGAA	1 cut(s)	172
SmiMI	CAYNNNNRTG	5 cut(s)	74, 107, 573, 798, 1668
SmlI	CTYRAG	2 cut(s)	363, 874
SmoI	CTYRAG	2 cut(s)	363, 874
SpeI	ACTAGT	1 cut(s)	1370
SphI	GCATGC	2 cut(s)	397, 678
Sse9I	AATT	8 cut(s)	27, 181, 727, 814, 939, 1039, 1267, 1937
SsiI	CCGC	5 cut(s)	20, 408, 1674, 1855, 1918
SspMI	CTAG	4 cut(s)	485, 489, 966, 1371
SstI	GAGCTC	2 cut(s)	68, 1954
StyD4I	CCNGG	1 cut(s)	1600
TaaI	ACNGT	5 cut(s)	517, 1110, 1197, 1406, 1654
TaqI	TCGA	2 cut(s)	172, 284
TasI	AATT	8 cut(s)	27, 181, 727, 814, 939, 1039, 1267, 1937
TatI	WGTACW	2 cut(s)	644, 1244
TauI	GCSGC	3 cut(s)	410, 1677, 1921
TfiI	GAWTC	4 cut(s)	609, 782, 1328, 1802
Tru1I	TTAA	4 cut(s)	423, 512, 861, 1115
Tru9I	TTAA	4 cut(s)	423, 512, 861, 1115
TscAI	CASTG	3 cut(s)	166, 724, 1170
TseFI	GTSAC	2 cut(s)	1144, 1366
TseI	GCWGC	5 cut(s)	557, 584, 703, 1613, 1829
Tsp45I	GTSAC	2 cut(s)	1144, 1366
TspDTI	ATGAA	6 cut(s)	795, 867, 936, 1103, 1320, 1977
TspRI	CASTG	3 cut(s)	166, 724, 1170
XapI	RAATTY	2 cut(s)	814, 939
XceI	RCATGY	3 cut(s)	397, 467, 678
XspI	CTAG	4 cut(s)	485, 489, 966, 1371
Zsp2I	ATGCAT	1 cut(s)	680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.