A Receptor for Ubiquitination Targets
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46670 AT2G46790 AT2G46790 AT2G46790 AT2G46790 AT2G46790 |
| fragaria_vesca | FvH4_7g17760 FvH4_7g17760 FvH4_7g17760 FvH4_7g17760 FvH4_7g17760 |
| malus_domestica | MD01G1088900.v1.1 |
| prunus_persica | Prupe.2G198500_v2.0.a1 Prupe.2G198500_v2.0.a1 |
| pyrus_communis | pycom01g11320 |
| rosa_chinensis | RchiOBHm_Chr1g0361151 |
| rosa_laevigata | RLG00000027745 |
| rosa_multiflora | Rmu_co8346237.1_g000001 Rmu_sc0000309.1_g000018 Rmu_sc0000427.1_g000034 Rmu_sc0001816.1_g000014 Rmu_sc0002872.1_g000001 Rmu_sc0006147.1_g000005 Rmu_sc0035862.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00295360 Rroxscaffold_6G00419120 |
| rosa_rugosa | Rorug01G0286500 Rorug01G0286500 Rorug01G0286500 Rorug01G0286500 |
| rosa_samantha | Rh1AG206100 Rh1AG297800 Rh1BG261800 Rh1CG191000 Rh1CG279200 Rh1DG291700 Rh2BG478900 Rh2DG487700 Rh2DG555300 Rh3AG290400 Rh4AG103700 Rh4AG103800 Rh4CG112000 |
| rosa_wichuraiana | Rw1G026320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 89 |
| AgsI | TTSAA | 2 cut(s) | 230, 340 |
| AjnI | CCWGG | 1 cut(s) | 181 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 146, 178 |
| AluBI | AGCT | 1 cut(s) | 328 |
| AluI | AGCT | 1 cut(s) | 328 |
| Alw26I | GTCTC | 1 cut(s) | 248 |
| ApeKI | GCWGC | 2 cut(s) | 178, 234 |
| AspS9I | GGNCC | 1 cut(s) | 81 |
| AvaII | GGWCC | 1 cut(s) | 81 |
| BanII | GRGCYC | 1 cut(s) | 51 |
| BbvI | GCAGC | 2 cut(s) | 190, 221 |
| BciT130I | CCWGG | 1 cut(s) | 183 |
| BcoDI | GTCTC | 1 cut(s) | 248 |
| BisI | GCNGC | 2 cut(s) | 179, 235 |
| BlsI | GCNGC | 2 cut(s) | 180, 236 |
| Bme1390I | CCNGG | 1 cut(s) | 183 |
| Bme18I | GGWCC | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 1 cut(s) | 81 |
| BmiI | GGNNCC | 2 cut(s) | 82, 115 |
| BmrFI | CCNGG | 1 cut(s) | 183 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 38, 70 |
| BsaI | GGTCTC | 1 cut(s) | 248 |
| BseBI | CCWGG | 1 cut(s) | 183 |
| BseGI | GGATG | 1 cut(s) | 16 |
| BseRI | GAGGAG | 1 cut(s) | 173 |
| BseXI | GCAGC | 2 cut(s) | 190, 221 |
| BslFI | GGGAC | 1 cut(s) | 94 |
| BsmAI | GTCTC | 1 cut(s) | 248 |
| BsmFI | GGGAC | 1 cut(s) | 94 |
| Bso31I | GGTCTC | 1 cut(s) | 248 |
| Bsp1286I | GDGCHC | 1 cut(s) | 51 |
| BspHI | TCATGA | 2 cut(s) | 291, 365 |
| BspLI | GGNNCC | 2 cut(s) | 82, 115 |
| BspTNI | GGTCTC | 1 cut(s) | 248 |
| Bst2UI | CCWGG | 1 cut(s) | 183 |
| Bst6I | CTCTTC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 1 cut(s) | 324 |
| BstF5I | GGATG | 1 cut(s) | 16 |
| BstMAI | GTCTC | 1 cut(s) | 248 |
| BstNI | CCWGG | 1 cut(s) | 183 |
| BstSCI | CCNGG | 1 cut(s) | 181 |
| BstV1I | GCAGC | 2 cut(s) | 190, 221 |
| BtsCI | GGATG | 1 cut(s) | 16 |
| BtsIMutI | CAGTG | 1 cut(s) | 142 |
| CciI | TCATGA | 2 cut(s) | 291, 365 |
| Cfr13I | GGNCC | 1 cut(s) | 81 |
| CviAII | CATG | 3 cut(s) | 119, 292, 366 |
| CviJI | RGCY | 8 cut(s) | 49, 109, 114, 181, 234, 273, 328, 355 |
| CviKI_1 | RGCY | 8 cut(s) | 49, 109, 114, 181, 234, 273, 328, 355 |
| DdeI | CTNAG | 1 cut(s) | 324 |
| Eam1104I | CTCTTC | 1 cut(s) | 150 |
| EarI | CTCTTC | 1 cut(s) | 150 |
| Eco24I | GRGCYC | 1 cut(s) | 51 |
| Eco31I | GGTCTC | 1 cut(s) | 248 |
| Eco47I | GGWCC | 1 cut(s) | 81 |
| EcoRII | CCWGG | 1 cut(s) | 181 |
| EcoT38I | GRGCYC | 1 cut(s) | 51 |
| FaeI | CATG | 3 cut(s) | 122, 295, 369 |
| FaqI | GGGAC | 1 cut(s) | 94 |
| FatI | CATG | 3 cut(s) | 118, 291, 365 |
| FauNDI | CATATG | 1 cut(s) | 247 |
| Fnu4HI | GCNGC | 2 cut(s) | 179, 235 |
| FokI | GGATG | 1 cut(s) | 3 |
| FriOI | GRGCYC | 1 cut(s) | 51 |
| Fsp4HI | GCNGC | 2 cut(s) | 179, 235 |
| GluI | GCNGC | 2 cut(s) | 179, 235 |
| Hin1II | CATG | 3 cut(s) | 122, 295, 369 |
| HincII | GTYRAC | 1 cut(s) | 27 |
| HindII | GTYRAC | 1 cut(s) | 27 |
| HinfI | GANTC | 1 cut(s) | 314 |
| Hpy166II | GTNNAC | 1 cut(s) | 27 |
| Hpy188I | TCNGA | 1 cut(s) | 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 292, 366 |
| Hpy8I | GTNNAC | 1 cut(s) | 27 |
| HpyAV | CCTTC | 2 cut(s) | 224, 334 |
| HpyCH4IV | ACGT | 1 cut(s) | 188 |
| HpyCH4V | TGCA | 3 cut(s) | 178, 245, 321 |
| HpyF3I | CTNAG | 1 cut(s) | 324 |
| HpySE526I | ACGT | 1 cut(s) | 188 |
| Hsp92II | CATG | 3 cut(s) | 122, 295, 369 |
| LmnI | GCTCC | 1 cut(s) | 119 |
| LpnPI | CCDG | 2 cut(s) | 168, 195 |
| Lsp1109I | GCAGC | 2 cut(s) | 190, 221 |
| MaeII | ACGT | 1 cut(s) | 188 |
| MboII | GAAGA | 2 cut(s) | 167, 180 |
| MhlI | GDGCHC | 1 cut(s) | 51 |
| MluCI | AATT | 3 cut(s) | 63, 192, 207 |
| MnlI | CCTC | 3 cut(s) | 62, 88, 151 |
| MseI | TTAA | 4 cut(s) | 191, 206, 210, 333 |
| MspR9I | CCNGG | 1 cut(s) | 183 |
| MvaI | CCWGG | 1 cut(s) | 183 |
| NdeI | CATATG | 1 cut(s) | 247 |
| NlaIII | CATG | 3 cut(s) | 122, 295, 369 |
| NlaIV | GGNNCC | 2 cut(s) | 82, 115 |
| PacI | TTAATTAA | 1 cut(s) | 210 |
| PagI | TCATGA | 2 cut(s) | 291, 365 |
| PfeI | GAWTC | 1 cut(s) | 314 |
| PkrI | GCNGC | 2 cut(s) | 180, 236 |
| PsiI | TTATAA | 1 cut(s) | 89 |
| Psp6I | CCWGG | 1 cut(s) | 181 |
| PspGI | CCWGG | 1 cut(s) | 181 |
| PspN4I | GGNNCC | 2 cut(s) | 82, 115 |
| PspPI | GGNCC | 1 cut(s) | 81 |
| SaqAI | TTAA | 4 cut(s) | 191, 206, 210, 333 |
| SatI | GCNGC | 2 cut(s) | 179, 235 |
| Sau96I | GGNCC | 1 cut(s) | 81 |
| ScrFI | CCNGG | 1 cut(s) | 183 |
| SduI | GDGCHC | 1 cut(s) | 51 |
| SetI | ASST | 4 cut(s) | 43, 191, 330, 345 |
| SinI | GGWCC | 1 cut(s) | 81 |
| Sse9I | AATT | 3 cut(s) | 63, 192, 207 |
| SspI | AATATT | 1 cut(s) | 262 |
| StyD4I | CCNGG | 1 cut(s) | 181 |
| TaiI | ACGT | 1 cut(s) | 191 |
| TasI | AATT | 3 cut(s) | 63, 192, 207 |
| TfiI | GAWTC | 1 cut(s) | 314 |
| Tru1I | TTAA | 4 cut(s) | 191, 206, 210, 333 |
| Tru9I | TTAA | 4 cut(s) | 191, 206, 210, 333 |
| TscAI | CASTG | 1 cut(s) | 142 |
| TseI | GCWGC | 2 cut(s) | 178, 234 |
| TspDTI | ATGAA | 2 cut(s) | 92, 354 |
| TspRI | CASTG | 1 cut(s) | 142 |
| VpaK11BI | GGWCC | 1 cut(s) | 81 |