pycom02g07700

3-oxoacyl- acyl-carrier-protein synthase II

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
5408956 .. 5412912
3957 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g07700.6

Sequence Viewer

Length: 1287 bp
ATGGCTGCCTCCTCTGTTGCATCTCCGCTCTGCACGTGGCTGGTGGCTGCTTGCATGTCGGTCACGTGCGACAGGGACTGCTCCCCCAGGGCATCTATGCTCAGCTCCTCCCGGAGGCGGCCGAAATGCGCCGGAAGGAGGCTGCCGTCCAAATGCAGTAGCTTTAGTGGCGAATTTCAGAAGGGTCTGATTTCTGCGTTCAGTGGATCGAGCATTCAGGGCCTCATGAGCTCCTGCTTGGCTTTCGAGCCGTGCGATGAGTACTACAGCTCTAGGGGTTTATCTTCTTTGGGATGCAGTGGGCTCTCGTCACTGTTTGGATCCAAATATGGGGCTTCCAATCGAAGGCAGAGGTCTCCAGGGGAAACCATGGCTGTAGCTGTGCAACCTACTGAAGAATTAACAAAACAGAAGAAACCTTTAACAAGACAGAGGCGGGTGGTTGTGACAGGAATGAGTGTGGTGACCCCACTCGGTCATGATTCTGATGTCTTCTACAATAATTTGCTTGAGGGAGTTAGTGGCATTAGTGAGATAGAAGCTTTTGATTGTACCCAGTTTCCAACGAGGATTGGTGGTGAGATCAAGTCTTTCTCAACGGATGGATGGGTAGCACCAAAGTTTTCTAGAAGAATGGATAAGTTCATGCTTTATTTGCTTACTGCTGGAAAGAAAGCCTTGGCAGATGCTGGAATCACAGAAGAAGTCATGGAGACATTAGACAAAGCAAAATGTGGGGTTTTGATTGGCTCAGCAATGGGTGGCATGAAGATCTTCAATGATGCAATTGAAGCTTTACGGGTTTCCTATAAGAAGATGAACCCTTTCTGTGTACCTTTCGCAACCACAAATATGGGTTCTGCCATGCTGGCAATGGATCTGGGTTGGATGGGCCCAAATTATTCAATTTCTACTGCTTGTGCTACAAGCAACTTCTGTATTTTGAATTCGGCTAATCATATCATTAGAGGTGAAGCAGACCTTATGCTTTGTGGTGGTTCAGATTCAGTGATGATACCTATTGGATTGGGAGGCTTTGTGGCATGCAGAGCACTGTCACAAAGAAACAATGATCCAACCAAAGCATCACGCCCTTGGGATAGTAATCGTGATGGCTTTGTTATGGGGGAAGGAGCTGGCGCTTTGCTTCTAGAAGAGTTAGAACATGCTAAGAAAAGAGGTGCAACTATTTATGCAGAATTCCTTGGTGGAAGCTTCACATGTGATGCTTACCACATGACTGAGCCACACCCTGATGATTTGGGCTGGGGTTATTCTCTGCATTGA

Protein Analysis

429

Amino Acids

46.02

Weight (kDa)

8.07

Isoelectric Point (pI)

55.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 28
AciI CCGC 3 cut(s) 26, 118, 436
AclWI GGATC 5 cut(s) 214, 315, 328, 885, 1067
AcoI YGGCCR 1 cut(s) 119
AcsI RAATTY 3 cut(s) 173, 946, 1199
AcuI CTGAAG 1 cut(s) 414
AcvI CACGTG 2 cut(s) 36, 66
AfaI GTAC 3 cut(s) 263, 553, 834
AfiI CCNNNNNNNGG 5 cut(s) 114, 117, 138, 330, 345
AflIII ACRYGT 1 cut(s) 1220
AgsI TTSAA 4 cut(s) 778, 791, 906, 946
AjnI CCWGG 2 cut(s) 86, 358
AluBI AGCT 9 cut(s) 105, 162, 231, 270, 380, 542, 794, 1136, 1215
AluI AGCT 9 cut(s) 105, 162, 231, 270, 380, 542, 794, 1136, 1215
Alw21I GWGCWC 2 cut(s) 233, 1054
Alw26I GTCTC 2 cut(s) 360, 707
AlwI GGATC 5 cut(s) 214, 315, 328, 885, 1067
AlwNI CAGNNNCTG 2 cut(s) 78, 689
AoxI GGCC 3 cut(s) 119, 220, 892
ApaI GGGCCC 1 cut(s) 896
ApeKI GCWGC 3 cut(s) 5, 47, 142
ApoI RAATTY 3 cut(s) 173, 946, 1199
Asp700I GAANNNNTTC 2 cut(s) 773, 824
AspLEI GCGC 2 cut(s) 131, 1142
AspS9I GGNCC 3 cut(s) 220, 892, 893
AsuC2I CCSGG 1 cut(s) 112
AsuHPI GGTGA 3 cut(s) 475, 590, 983
BaeGI GKGCMC 1 cut(s) 896
BamHI GGATCC 1 cut(s) 320
BanII GRGCYC 3 cut(s) 233, 306, 896
BbrPI CACGTG 2 cut(s) 36, 66
BbsI GAAGAC 1 cut(s) 484
Bbv12I GWGCWC 2 cut(s) 233, 1054
BbvI GCAGC 2 cut(s) 34, 129
BccI CCATC 4 cut(s) 596, 600, 883, 1106
BceAI ACGGC 2 cut(s) 130, 235
BciT130I CCWGG 2 cut(s) 88, 360
BcnI CCSGG 1 cut(s) 112
BcoDI GTCTC 2 cut(s) 360, 707
BfaI CTAG 3 cut(s) 273, 627, 1151
BfmI CTRYAG 2 cut(s) 265, 375
BfoI RGCGCY 1 cut(s) 1143
BglI GCCNNNNNGGC 1 cut(s) 869
BglII AGATCT 1 cut(s) 771
BisI GCNGC 4 cut(s) 6, 48, 119, 143
BlpI GCTNAGC 2 cut(s) 101, 751
BlsI GCNGC 4 cut(s) 7, 49, 120, 144
BmcAI AGTACT 1 cut(s) 263
Bme1390I CCNGG 3 cut(s) 88, 112, 360
BmgT120I GGNCC 3 cut(s) 220, 892, 893
BmiI GGNNCC 2 cut(s) 322, 894
BmrFI CCNGG 3 cut(s) 88, 112, 360
BmrI ACTGGG 1 cut(s) 550
BmsI GCATC 7 cut(s) 29, 101, 284, 676, 772, 1094, 1216
BmuI ACTGGG 1 cut(s) 550
BpiI GAAGAC 1 cut(s) 484
BpmI CTGGAG 1 cut(s) 342
Bpu1102I GCTNAGC 2 cut(s) 101, 751
BpuEI CTTGAG 1 cut(s) 530
BpuMI CCSGG 1 cut(s) 112
BsaAI YACGTR 2 cut(s) 36, 66
BsaBI GATNNNNATC 1 cut(s) 1104
BsaI GGTCTC 1 cut(s) 360
BsaJI CCNNGG 7 cut(s) 86, 87, 359, 369, 678, 1094, 1204
BsaXI ACNNNNNCTCC 2 cut(s) 1023, 1053
Bsc4I CCNNNNNNNGG 5 cut(s) 114, 117, 138, 330, 345
Bse1I ACTGG 1 cut(s) 556
Bse3DI GCAATG 2 cut(s) 762, 879
Bse8I GATNNNNATC 1 cut(s) 1104
BseBI CCWGG 2 cut(s) 88, 360
BseDI CCNNGG 7 cut(s) 86, 87, 359, 369, 678, 1094, 1204
BseGI GGATG 4 cut(s) 299, 607, 611, 894
BseJI GATNNNNATC 1 cut(s) 1104
BseLI CCNNNNNNNGG 5 cut(s) 114, 117, 138, 330, 345
BseMI GCAATG 2 cut(s) 762, 879
BseMII CTCAG 3 cut(s) 115, 765, 1233
BseNI ACTGG 1 cut(s) 556
BseRI GAGGAG 1 cut(s) 97
BseSI GKGCMC 1 cut(s) 896
BseX3I CGGCCG 1 cut(s) 119
BseXI GCAGC 2 cut(s) 34, 129
BseYI CCCAGC 1 cut(s) 1266
BsgI GTGCAG 1 cut(s) 16
Bsh1285I CGRYCG 1 cut(s) 122
BshFI GGCC 3 cut(s) 121, 222, 894
BsiEI CGRYCG 1 cut(s) 122
BsiHKAI GWGCWC 2 cut(s) 233, 1054
BsiSI CCGG 2 cut(s) 112, 132
BslFI GGGAC 1 cut(s) 89
BslI CCNNNNNNNGG 5 cut(s) 114, 117, 138, 330, 345
BsmAI GTCTC 2 cut(s) 360, 707
BsmFI GGGAC 1 cut(s) 89
BsmI GAATGC 1 cut(s) 213
BsnI GGCC 3 cut(s) 121, 222, 894
Bso31I GGTCTC 1 cut(s) 360
Bsp120I GGGCCC 1 cut(s) 892
Bsp1286I GDGCHC 4 cut(s) 233, 306, 896, 1054
Bsp143I GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
Bsp1720I GCTNAGC 2 cut(s) 101, 751
Bsp19I CCATGG 1 cut(s) 369
BspACI CCGC 3 cut(s) 26, 118, 436
BspANI GGCC 3 cut(s) 121, 222, 894
BspCNI CTCAG 3 cut(s) 114, 764, 1234
BspHI TCATGA 2 cut(s) 225, 478
BspLI GGNNCC 2 cut(s) 322, 894
BspPI GGATC 5 cut(s) 214, 315, 328, 885, 1067
BspTNI GGTCTC 1 cut(s) 360
BsrBI CCGCTC 1 cut(s) 28
BsrDI GCAATG 2 cut(s) 762, 879
BsrI ACTGG 1 cut(s) 556
BssECI CCNNGG 7 cut(s) 86, 87, 359, 369, 678, 1094, 1204
BssMI GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
BssT1I CCWWGG 4 cut(s) 369, 678, 1094, 1204
Bst2UI CCWGG 2 cut(s) 88, 360
Bst4CI ACNGT 2 cut(s) 315, 1056
Bst6I CTCTTC 1 cut(s) 1149
BstBAI YACGTR 2 cut(s) 36, 66
BstC8I GCNNGC 4 cut(s) 52, 870, 1045, 1138
BstDEI CTNAG 4 cut(s) 101, 751, 1170, 1242
BstDSI CCRYGG 1 cut(s) 369
BstEII GGTNACC 1 cut(s) 463
BstENI CCTNNNNNAGG 1 cut(s) 112
BstF5I GGATG 4 cut(s) 299, 607, 611, 894
BstH2I RGCGCY 1 cut(s) 1143
BstHHI GCGC 2 cut(s) 131, 1142
BstKTI GATC 6 cut(s) 209, 323, 585, 774, 880, 1075
BstMAI GTCTC 2 cut(s) 360, 707
BstMBI GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
BstMCI CGRYCG 1 cut(s) 122
BstMWI GCNNNNNNNGC 7 cut(s) 168, 219, 228, 655, 791, 869, 1049
BstNI CCWGG 2 cut(s) 88, 360
BstNSI RCATGY 4 cut(s) 58, 1047, 1169, 1224
BstPI GGTNACC 1 cut(s) 463
BstSCI CCNGG 3 cut(s) 86, 110, 358
BstSFI CTRYAG 2 cut(s) 265, 375
BstSLI GKGCMC 1 cut(s) 896
BstV1I GCAGC 2 cut(s) 34, 129
BstV2I GAAGAC 1 cut(s) 484
BstX2I RGATCY 3 cut(s) 320, 771, 877
BstXI CCANNNNNNTGG 1 cut(s) 853
BstYI RGATCY 3 cut(s) 320, 771, 877
BstZI CGGCCG 1 cut(s) 119
BsuRI GGCC 3 cut(s) 121, 222, 894
BtgI CCRYGG 1 cut(s) 369
BtgZI GCGATG 1 cut(s) 270
BtsCI GGATG 4 cut(s) 299, 607, 611, 894
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 5 cut(s) 208, 304, 311, 1014, 1052
Cac8I GCNNGC 4 cut(s) 52, 870, 1045, 1138
CaiI CAGNNNCTG 2 cut(s) 78, 689
CciI TCATGA 2 cut(s) 225, 478
CfoI GCGC 2 cut(s) 131, 1142
Cfr13I GGNCC 3 cut(s) 220, 892, 893
Csp6I GTAC 3 cut(s) 262, 552, 833
CviQI GTAC 3 cut(s) 262, 552, 833
DdeI CTNAG 4 cut(s) 101, 751, 1170, 1242
DpnI GATC 6 cut(s) 208, 322, 584, 773, 879, 1074
DpnII GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
EaeI YGGCCR 1 cut(s) 119
EagI CGGCCG 1 cut(s) 119
Eam1104I CTCTTC 1 cut(s) 1149
EarI CTCTTC 1 cut(s) 1149
Ecl136II GAGCTC 1 cut(s) 231
EclXI CGGCCG 1 cut(s) 119
Eco130I CCWWGG 4 cut(s) 369, 678, 1094, 1204
Eco24I GRGCYC 3 cut(s) 233, 306, 896
Eco31I GGTCTC 1 cut(s) 360
Eco52I CGGCCG 1 cut(s) 119
Eco53kI GAGCTC 1 cut(s) 231
Eco57I CTGAAG 1 cut(s) 414
Eco72I CACGTG 2 cut(s) 36, 66
Eco91I GGTNACC 1 cut(s) 463
EcoICRI GAGCTC 1 cut(s) 231
EcoNI CCTNNNNNAGG 1 cut(s) 112
EcoO109I RGGNCCY 1 cut(s) 220
EcoO65I GGTNACC 1 cut(s) 463
EcoRI GAATTC 2 cut(s) 946, 1199
EcoRII CCWGG 2 cut(s) 86, 358
EcoT14I CCWWGG 4 cut(s) 369, 678, 1094, 1204
EcoT38I GRGCYC 3 cut(s) 233, 306, 896
ErhI CCWWGG 4 cut(s) 369, 678, 1094, 1204
FalI AAGNNNNNCTT 4 cut(s) 662, 694, 966, 998
FaqI GGGAC 1 cut(s) 89
FauI CCCGC 1 cut(s) 429
Fnu4HI GCNGC 4 cut(s) 6, 48, 119, 143
FokI GGATG 4 cut(s) 306, 614, 618, 901
FriOI GRGCYC 3 cut(s) 233, 306, 896
Fsp4HI GCNGC 4 cut(s) 6, 48, 119, 143
FspBI CTAG 3 cut(s) 273, 627, 1151
GlaI GCGC 2 cut(s) 130, 1141
GluI GCNGC 4 cut(s) 6, 48, 119, 143
GsaI CCCAGC 1 cut(s) 1270
GsuI CTGGAG 1 cut(s) 342
HaeII RGCGCY 1 cut(s) 1143
HaeIII GGCC 3 cut(s) 121, 222, 894
HapII CCGG 2 cut(s) 112, 132
HhaI GCGC 2 cut(s) 131, 1142
Hin6I GCGC 2 cut(s) 129, 1140
HinP1I GCGC 2 cut(s) 129, 1140
HindIII AAGCTT 3 cut(s) 540, 792, 1213
HinfI GANTC 3 cut(s) 482, 693, 1004
HpaII CCGG 2 cut(s) 112, 132
HphI GGTGA 3 cut(s) 475, 590, 983
Hpy166II GTNNAC 1 cut(s) 833
Hpy188I TCNGA 4 cut(s) 180, 189, 487, 1003
Hpy188III TCNNGA 5 cut(s) 226, 479, 627, 1109, 1151
Hpy8I GTNNAC 1 cut(s) 833
HpyAV CCTTC 4 cut(s) 129, 175, 339, 1124
HpyCH4III ACNGT 2 cut(s) 315, 1056
HpyCH4IV ACGT 2 cut(s) 35, 65
HpyF10VI GCNNNNNNNGC 7 cut(s) 168, 219, 228, 655, 791, 869, 1049
HpyF3I CTNAG 4 cut(s) 101, 751, 1170, 1242
HpySE526I ACGT 2 cut(s) 35, 65
HspAI GCGC 2 cut(s) 129, 1140
Kzo9I GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
LmnI GCTCC 4 cut(s) 86, 110, 236, 1133
Lsp1109I GCAGC 2 cut(s) 34, 129
LweI GCATC 7 cut(s) 29, 101, 284, 676, 772, 1094, 1216
MaeI CTAG 3 cut(s) 273, 627, 1151
MaeII ACGT 2 cut(s) 35, 65
MaeIII GTNAC 5 cut(s) 61, 309, 445, 463, 1056
MalI GATC 6 cut(s) 208, 322, 584, 773, 879, 1074
MbiI CCGCTC 1 cut(s) 28
MboI GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
MfeI CAATTG 1 cut(s) 786
MflI RGATCY 3 cut(s) 320, 771, 877
MhlI GDGCHC 4 cut(s) 233, 306, 896, 1054
MluCI AATT 8 cut(s) 173, 398, 502, 786, 898, 906, 946, 1199
MmeI TCCRAC 3 cut(s) 587, 866, 1100
MroXI GAANNNNTTC 2 cut(s) 773, 824
MseI TTAA 2 cut(s) 401, 422
MslI CAYNNNNRTG 2 cut(s) 851, 1254
MspI CCGG 2 cut(s) 112, 132
MspR9I CCNGG 3 cut(s) 88, 112, 360
MunI CAATTG 1 cut(s) 786
Mva1269I GAATGC 1 cut(s) 213
MvaI CCWGG 2 cut(s) 88, 360
MwoI GCNNNNNNNGC 7 cut(s) 168, 219, 228, 655, 791, 869, 1049
NciI CCSGG 1 cut(s) 112
NcoI CCATGG 1 cut(s) 369
NdeII GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
NlaIV GGNNCC 2 cut(s) 322, 894
NmuCI GTSAC 5 cut(s) 61, 309, 445, 463, 1056
NspI RCATGY 4 cut(s) 58, 1047, 1169, 1224
PaeI GCATGC 1 cut(s) 1047
PagI TCATGA 2 cut(s) 225, 478
PasI CCCWGGG 1 cut(s) 87
PciI ACATGT 1 cut(s) 1220
PcsI WCGNNNNNNNCGW 1 cut(s) 252
PctI GAATGC 1 cut(s) 213
PdmI GAANNNNTTC 2 cut(s) 773, 824
PfeI GAWTC 3 cut(s) 482, 693, 1004
PfoI TCCNGGA 1 cut(s) 110
PkrI GCNGC 4 cut(s) 7, 49, 120, 144
PmaCI CACGTG 2 cut(s) 36, 66
PmlI CACGTG 2 cut(s) 36, 66
Ppu21I YACGTR 2 cut(s) 36, 66
PscI ACATGT 1 cut(s) 1220
Psp124BI GAGCTC 1 cut(s) 233
Psp6I CCWGG 2 cut(s) 86, 358
PspCI CACGTG 2 cut(s) 36, 66
PspEI GGTNACC 1 cut(s) 463
PspFI CCCAGC 1 cut(s) 1266
PspGI CCWGG 2 cut(s) 86, 358
PspN4I GGNNCC 2 cut(s) 322, 894
PspOMI GGGCCC 1 cut(s) 892
PspPI GGNCC 3 cut(s) 220, 892, 893
PstNI CAGNNNCTG 2 cut(s) 78, 689
PsuI RGATCY 3 cut(s) 320, 771, 877
RsaI GTAC 3 cut(s) 263, 553, 834
RsaNI GTAC 3 cut(s) 262, 552, 833
RseI CAYNNNNRTG 2 cut(s) 851, 1254
SacI GAGCTC 1 cut(s) 233
SaqAI TTAA 2 cut(s) 401, 422
SatI GCNGC 4 cut(s) 6, 48, 119, 143
Sau3AI GATC 6 cut(s) 206, 320, 582, 771, 877, 1072
Sau96I GGNCC 3 cut(s) 220, 892, 893
ScaI AGTACT 1 cut(s) 263
ScrFI CCNGG 3 cut(s) 88, 112, 360
SduI GDGCHC 4 cut(s) 233, 306, 896, 1054
SfaNI GCATC 7 cut(s) 29, 101, 284, 676, 772, 1094, 1216
SfcI CTRYAG 2 cut(s) 265, 375
SmiMI CAYNNNNRTG 2 cut(s) 851, 1254
SmlI CTYRAG 1 cut(s) 509
SmoI CTYRAG 1 cut(s) 509
SphI GCATGC 1 cut(s) 1047
Sse9I AATT 8 cut(s) 173, 398, 502, 786, 898, 906, 946, 1199
SsiI CCGC 3 cut(s) 26, 118, 436
SspMI CTAG 3 cut(s) 273, 627, 1151
SstI GAGCTC 1 cut(s) 233
StyD4I CCNGG 3 cut(s) 86, 110, 358
StyI CCWWGG 4 cut(s) 369, 678, 1094, 1204
TaaI ACNGT 2 cut(s) 315, 1056
TaiI ACGT 2 cut(s) 38, 68
TaqI TCGA 3 cut(s) 209, 246, 343
TaqII GACCGA 2 cut(s) 49, 464
TasI AATT 8 cut(s) 173, 398, 502, 786, 898, 906, 946, 1199
TatI WGTACW 1 cut(s) 261
TauI GCSGC 1 cut(s) 121
TfiI GAWTC 3 cut(s) 482, 693, 1004
Tru1I TTAA 2 cut(s) 401, 422
Tru9I TTAA 2 cut(s) 401, 422
TscAI CASTG 5 cut(s) 208, 304, 318, 1014, 1059
TseFI GTSAC 5 cut(s) 61, 309, 445, 463, 1056
TseI GCWGC 3 cut(s) 5, 47, 142
Tsp45I GTSAC 5 cut(s) 61, 309, 445, 463, 1056
TspDTI ATGAA 3 cut(s) 634, 782, 833
TspGWI ACGGA 1 cut(s) 614
TspRI CASTG 5 cut(s) 208, 304, 318, 1014, 1059
XagI CCTNNNNNAGG 1 cut(s) 112
XapI RAATTY 3 cut(s) 173, 946, 1199
XbaI TCTAGA 2 cut(s) 626, 1150
XceI RCATGY 4 cut(s) 58, 1047, 1169, 1224
XcmI CCANNNNNNNNNTGG 1 cut(s) 871
XmnI GAANNNNTTC 2 cut(s) 773, 824
XspI CTAG 3 cut(s) 273, 627, 1151
ZrmI AGTACT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.