Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001309.1

Orthogroup ID

OG0002195

Physical Location & Seq

Genomic Coordinates Reverse (-)

96734 .. 105430

Gene Structure 8697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001309.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

atggctgccgccacttcggccgcgtctcctctctgcacgtggctcgtcgccgcttgcatgtcggtcacgtgcgacggggactactccgcccggccgtcacgtgccaagttgggcggcggccggagacggaggctggcgaaatgtagtggcagctactgcttaagtagtaggggcggatccagcattcagggcctgatgacttcttgtttggcgtttgagccttgcgatgagtactatagctctcagggtttatcttctttgggctcaaatgggctgtcctcgctgtttggatccaaaactgggtctttgaatcgaagcaggaggcgctttaatgcccattctggggaaaccatggctgttgctgtgcaacctactgaagaattaacaaagcaaaagaaacctataacaagacagaggcgagtggttgtgacaggaatgagcgtggtgaccccacttggtcatgatgctgatgttttctacaataatctgcttcagggtgttagtggcattagtgagatagaagcttttgattgttccccatttcctacgaaaattggtggagagatcaagtccttttccactgatggatgggtagcaccaaagttttccagacgaatggataaattcatgctttacttgcttactgctggaaagaaagccttggcagatggtggaattacagaagaagtcatggagaaaattgataaaactaaatgtggtgtgttgatcggttctgcaatgggtggaatgaagatcttcaatgatgcaattgaagctttacgggtttcatataaaaagatgaatcctttctgtgtgcctttcgcaactacaaatatgggttctgccatgctcgcaatggatctgggttggatgggcccaaattattcaatctctactgcttgtgctacaagcaacttctgcattttgaattcagcaaatcatatcattagaggtgaagctgacattatgctttctggtggttcagattcagtaatgatacctattggcttgggaggctttgtggcatgcagagcactttcacaaaggaacagtgatccaactaaagcatcacgaccttgggatactaatcgtgatggatttgttatgggggaaggagctggagtgttgcttctagaagagttagaacatgctaagaaaagaggtgcaaccatttatgcagagtttctcggtggaagcttcacatgtgatgcttaccacatgactgagccacgccctgatggggctggagttattcaatgcatagagaaggcattagctcagtctggcgtatctaaggaagacgtcaattacattaatgcacatgcaacatccacacctgctggagacctaaaagagtataatgctctgatgcattgttttggccagaatcctgagttgagagtcaactctacaaaatccatgattggtcacctgctaggagcagctggcgcagtcgaggctgttgcagcagtacaggcaattcgaactggatgggttcatccaaatatcaatctggaagacccagatgagggtgtggatatgaaggtgcttgtaggcccaaagaaagaaagactggacattaaggtggcattgtctaattcgtttgggtttggggatcattttccttttgtttttgatatcttcgacataaggaccaagctccacatcttcttctctgtctccgacaccaaggatctccagatcgtgaacctcactcttacagttctctatcaccgtgaggtgaatcgcctccatcagatcttcaaaaccctagggatcgagtacgacaagaaggtcctcccttcggcaaccacaggaaggcctcacggcgatctgcttgtgaagctggcgtcagagtcgcggtggcggaagtgctcgagcggctttgatggtggcagtgagttcatggacgacttgggtcgccaccttcaaaccctagccgccacctccgtatttattaaagccctcaatcccaggattccagaaccggcggcggaaccaccagaaccggtaggaaaactaccgaactggccaccagaagtatcgaaccagccctccaagaagaaaaaaagagggatccctgcaagggttcaccaccttccggacctccgattgctaccaaatttttccaccagtagcggctcaaccccaggattcctgaataggaagcaaaaccccaaaaaccggtccggaaataggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004312 GO:0004315 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006636 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009266 GO:0009409 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009631 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0032787 GO:0033559 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00780 ko01100 ko01212 map00061 map00780 map01100 map01212

Pfam Domains

Protein Families

Ketoacyl-synt_C ketoacyl-synt

Protein Analysis

733

Amino Acids

79.32

Weight (kDa)

8.96

Isoelectric Point (pI)

47.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74960 AT1G74960 AT1G74960
fragaria_vesca	FvH4_1g09200 FvH4_1g09200 FvH4_1g09200 FvH4_1g09200 FvH4_6g35220 FvH4_6g35220
malus_domestica	MD02G1097200.v1.1 MD02G1097500.v1.1 MD02G1098500.v1.1 MD02G1101500.v1.1 MD09G1177500.v1.1 MD15G1221800.v1.1
prunus_persica	Prupe.3G036900_v2.0.a1 Prupe.3G036900_v2.0.a1 Prupe.7G193900_v2.0.a1 Prupe.7G193900_v2.0.a1 Prupe.7G193900_v2.0.a1
pyrus_communis	pycom02g07700 pycom15g19630
rosa_chinensis	RchiOBHm_Chr2g0095651 RchiOBHm_Chr2g0146561
rosa_laevigata	RLG00000016584 RLG00000020207
rosa_multiflora	Rmu_sc0001309.1_g000017 Rmu_sc0001986.1_g000028
rosa_roxburghii	Rroxscaffold_2G00100040 Rroxscaffold_2G00146150
rosa_rugosa	Rorug02G0052800 Rorug02G0394700 Rorug02G0394800 Rorug02G0394800
rosa_samantha	Rh2AG100800 Rh2AG451600 Rh2BG464400 Rh2CG104800 Rh2CG438500 Rh2DG102000 Rh2DG473400
rosa_wichuraiana	Rw2G007650 Rw2G036890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1345, 1440
AasI	GACNNNNNNGTC	1 cut(s)	1793
AatII	GACGTC	1 cut(s)	1305
Acc36I	ACCTGC	2 cut(s)	1345, 1440
AccBSI	CCGCTC	1 cut(s)	1881
AccII	CGCG	2 cut(s)	23, 1861
AccIII	TCCGGA	2 cut(s)	2101, 2189
AcoI	YGGCCR	5 cut(s)	18, 92, 118, 1381, 2030
AcsI	RAATTY	3 cut(s)	623, 928, 2122
AcuI	CTGAAG	2 cut(s)	396, 476
AcvI	CACGTG	3 cut(s)	39, 69, 101
AcyI	GRCGYC	2 cut(s)	1302, 1850
AfaI	GTAC	3 cut(s)	233, 1473, 1784
AflII	CTTAAG	1 cut(s)	160
AflIII	ACRYGT	1 cut(s)	1202
AgeI	ACCGGT	2 cut(s)	2008, 2184
AgsI	TTSAA	8 cut(s)	310, 760, 773, 888, 928, 1256, 1765, 1931
AjnI	CCWGG	2 cut(s)	1973, 2149
AloI	GAACNNNNNNTCC	2 cut(s)	2039, 2071
Alw21I	GWGCWC	2 cut(s)	1036, 1877
Alw26I	GTCTC	4 cut(s)	30, 118, 1338, 1684
AlwNI	CAGNNNCTG	2 cut(s)	156, 193
Ama87I	CYCGRG	1 cut(s)	1876
Aor13HI	TCCGGA	2 cut(s)	2101, 2189
AoxI	GGCC	9 cut(s)	18, 92, 118, 190, 874, 1381, 1555, 1820, 2030
ApaI	GGGCCC	1 cut(s)	878
ApeKI	GCWGC	4 cut(s)	5, 150, 1442, 1466
ApoI	RAATTY	3 cut(s)	623, 928, 2122
ArsI	GACNNNNNNTTYG	4 cut(s)	190, 222, 260, 292
AseI	ATTAAT	1 cut(s)	1314
AsiGI	ACCGGT	2 cut(s)	2008, 2184
Asp700I	GAANNNNTTC	2 cut(s)	755, 806
AspA2I	CCTAGG	1 cut(s)	1771
AspLEI	GCGC	2 cut(s)	327, 1451
AspS9I	GGNCC	8 cut(s)	190, 874, 875, 1556, 1653, 1795, 2104, 2187
AsuC2I	CCSGG	1 cut(s)	91
AsuHPI	GGTGA	6 cut(s)	457, 965, 1421, 1724, 1753, 2084
AsuII	TTCGAA	1 cut(s)	1483
AvaI	CYCGRG	1 cut(s)	1876
AvaII	GGWCC	4 cut(s)	1653, 1795, 2104, 2187
AvrII	CCTAGG	1 cut(s)	1771
BaeGI	GKGCMC	1 cut(s)	878
BalI	TGGCCA	2 cut(s)	1383, 2032
BamHI	GGATCC	3 cut(s)	176, 290, 2076
BanII	GRGCYC	2 cut(s)	266, 878
BbrPI	CACGTG	3 cut(s)	39, 69, 101
BbsI	GAAGAC	2 cut(s)	1305, 1524
Bbv12I	GWGCWC	2 cut(s)	1036, 1877
BbvI	GCAGC	3 cut(s)	162, 1454, 1478
BccI	CCATC	9 cut(s)	578, 582, 662, 865, 1088, 1232, 1485, 1761, 1883
BceAI	ACGGC	2 cut(s)	79, 1843
BcgI	CGANNNNNNTGC	4 cut(s)	25, 59, 1445, 1479
BciT130I	CCWGG	2 cut(s)	1975, 2151
BciVI	GTATCC	1 cut(s)	1075
BcnI	CCSGG	1 cut(s)	91
BcoDI	GTCTC	4 cut(s)	30, 118, 1338, 1684
BfaI	CTAG	4 cut(s)	1133, 1436, 1772, 1937
BfmI	CTRYAG	1 cut(s)	235
BfoI	RGCGCY	1 cut(s)	328
BfrI	CTTAAG	1 cut(s)	160
BfuAI	ACCTGC	2 cut(s)	1345, 1440
BfuI	GTATCC	1 cut(s)	1075
BglI	GCCNNNNNGGC	1 cut(s)	17
BglII	AGATCT	2 cut(s)	753, 1758
BlnI	CCTAGG	1 cut(s)	1771
BmcAI	AGTACT	1 cut(s)	233
Bme1390I	CCNGG	3 cut(s)	91, 1975, 2151
Bme18I	GGWCC	4 cut(s)	1653, 1795, 2104, 2187
BmeT110I	CYCGRG	1 cut(s)	1876
BmgT120I	GGNCC	8 cut(s)	190, 874, 875, 1556, 1653, 1795, 2104, 2187
BmiI	GGNNCC	5 cut(s)	178, 292, 876, 1998, 2078
BmrFI	CCNGG	3 cut(s)	91, 1975, 2151
BmrI	ACTGGG	1 cut(s)	309
BmsI	GCATC	5 cut(s)	454, 754, 1076, 1198, 1359
BmuI	ACTGGG	1 cut(s)	309
BoxI	GACNNNNGTC	1 cut(s)	1917
BpiI	GAAGAC	2 cut(s)	1305, 1524
BpmI	CTGGAG	4 cut(s)	1140, 1266, 1362, 1682
Bpu14I	TTCGAA	1 cut(s)	1483
BpuMI	CCSGG	1 cut(s)	91
BsaAI	YACGTR	3 cut(s)	39, 69, 101
BsaBI	GATNNNNATC	1 cut(s)	1086
BsaHI	GRCGYC	2 cut(s)	1302, 1850
BsaI	GGTCTC	1 cut(s)	1338
BsaJI	CCNNGG	7 cut(s)	351, 660, 1076, 1689, 1771, 1973, 2149
BsaWI	WCCGGW	4 cut(s)	2008, 2101, 2184, 2189
BsaXI	ACNNNNNCTCC	6 cut(s)	1005, 1035, 1107, 1137, 2039, 2069
Bse118I	RCCGGY	3 cut(s)	1987, 2008, 2184
Bse1I	ACTGG	5 cut(s)	304, 1492, 1578, 2033, 2133
Bse3DI	GCAATG	2 cut(s)	744, 861
Bse8I	GATNNNNATC	1 cut(s)	1086
BseAI	TCCGGA	2 cut(s)	2101, 2189
BseBI	CCWGG	2 cut(s)	1975, 2151
BseDI	CCNNGG	7 cut(s)	351, 660, 1076, 1689, 1771, 1973, 2149
BseGI	GGATG	5 cut(s)	593, 876, 1328, 1496, 1498
BseJI	GATNNNNATC	1 cut(s)	1086
BseMI	GCAATG	2 cut(s)	744, 861
BseMII	CTCAG	4 cut(s)	257, 1215, 1292, 1383
BseNI	ACTGG	5 cut(s)	304, 1492, 1578, 2033, 2133
BseRI	GAGGAG	1 cut(s)	18
BseSI	GKGCMC	1 cut(s)	878
BseX3I	CGGCCG	3 cut(s)	18, 92, 118
BseXI	GCAGC	3 cut(s)	162, 1454, 1478
BsgI	GTGCAG	1 cut(s)	19
Bsh1236I	CGCG	2 cut(s)	23, 1861
Bsh1285I	CGRYCG	3 cut(s)	21, 95, 121
BshFI	GGCC	9 cut(s)	20, 94, 120, 192, 876, 1383, 1557, 1822, 2032
BshTI	ACCGGT	2 cut(s)	2008, 2184
BsiEI	CGRYCG	3 cut(s)	21, 95, 121
BsiHKAI	GWGCWC	2 cut(s)	1036, 1877
BsiHKCI	CYCGRG	1 cut(s)	1876
BsiSI	CCGG	7 cut(s)	91, 121, 1988, 2009, 2102, 2185, 2190
BslFI	GGGAC	1 cut(s)	92
BsmAI	GTCTC	4 cut(s)	30, 118, 1338, 1684
BsmBI	CGTCTC	2 cut(s)	30, 118
BsmFI	GGGAC	1 cut(s)	92
BsmI	GAATGC	1 cut(s)	183
BsnI	GGCC	9 cut(s)	20, 94, 120, 192, 876, 1383, 1557, 1822, 2032
Bso31I	GGTCTC	1 cut(s)	1338
BsoBI	CYCGRG	1 cut(s)	1876
Bsp119I	TTCGAA	1 cut(s)	1483
Bsp120I	GGGCCC	1 cut(s)	874
Bsp1286I	GDGCHC	4 cut(s)	266, 878, 1036, 1877
Bsp13I	TCCGGA	2 cut(s)	2101, 2189
Bsp19I	CCATGG	1 cut(s)	351
BspANI	GGCC	9 cut(s)	20, 94, 120, 192, 876, 1383, 1557, 1822, 2032
BspCNI	CTCAG	4 cut(s)	256, 1216, 1291, 1384
BspEI	TCCGGA	2 cut(s)	2101, 2189
BspFNI	CGCG	2 cut(s)	23, 1861
BspHI	TCATGA	1 cut(s)	460
BspLI	GGNNCC	5 cut(s)	178, 292, 876, 1998, 2078
BspMI	ACCTGC	2 cut(s)	1345, 1440
BspT104I	TTCGAA	1 cut(s)	1483
BspTI	CTTAAG	1 cut(s)	160
BspTNI	GGTCTC	1 cut(s)	1338
BsrBI	CCGCTC	1 cut(s)	1881
BsrDI	GCAATG	2 cut(s)	744, 861
BsrFI	RCCGGY	3 cut(s)	1987, 2008, 2184
BsrI	ACTGG	5 cut(s)	304, 1492, 1578, 2033, 2133
BssAI	RCCGGY	3 cut(s)	1987, 2008, 2184
BssECI	CCNNGG	7 cut(s)	351, 660, 1076, 1689, 1771, 1973, 2149
BssNI	GRCGYC	2 cut(s)	1302, 1850
BssT1I	CCWWGG	5 cut(s)	351, 660, 1076, 1689, 1771
Bst2UI	CCWGG	2 cut(s)	1975, 2151
Bst4CI	ACNGT	3 cut(s)	1052, 1723, 1736
Bst6I	CTCTTC	1 cut(s)	1131
BstACI	GRCGYC	2 cut(s)	1302, 1850
BstAFI	CTTAAG	1 cut(s)	160
BstAPI	GCANNNNNTGC	2 cut(s)	156, 918
BstBAI	YACGTR	3 cut(s)	39, 69, 101
BstBI	TTCGAA	1 cut(s)	1483
BstC8I	GCNNGC	6 cut(s)	55, 135, 852, 1027, 1447, 1848
BstDEI	CTNAG	6 cut(s)	243, 1152, 1224, 1278, 1293, 1392
BstDSI	CCRYGG	1 cut(s)	351
BstEII	GGTNACC	2 cut(s)	445, 1427
BstF5I	GGATG	5 cut(s)	593, 876, 1328, 1496, 1498
BstFNI	CGCG	2 cut(s)	23, 1861
BstH2I	RGCGCY	1 cut(s)	328
BstHHI	GCGC	2 cut(s)	327, 1451
BstMAI	GTCTC	4 cut(s)	30, 118, 1338, 1684
BstMCI	CGRYCG	3 cut(s)	21, 95, 121
BstNI	CCWGG	2 cut(s)	1975, 2151
BstNSI	RCATGY	5 cut(s)	61, 1029, 1151, 1206, 1325
BstPAI	GACNNNNGTC	1 cut(s)	1917
BstPI	GGTNACC	2 cut(s)	445, 1427
BstSCI	CCNGG	3 cut(s)	89, 1973, 2149
BstSFI	CTRYAG	1 cut(s)	235
BstSLI	GKGCMC	1 cut(s)	878
BstUI	CGCG	2 cut(s)	23, 1861
BstV1I	GCAGC	3 cut(s)	162, 1454, 1478
BstV2I	GAAGAC	2 cut(s)	1305, 1524
BstX2I	RGATCY	7 cut(s)	176, 290, 753, 859, 1693, 1758, 2076
BstXI	CCANNNNNNTGG	1 cut(s)	616
BstYI	RGATCY	7 cut(s)	176, 290, 753, 859, 1693, 1758, 2076
BstZI	CGGCCG	3 cut(s)	18, 92, 118
BsuI	GTATCC	1 cut(s)	1075
BsuRI	GGCC	9 cut(s)	20, 94, 120, 192, 876, 1383, 1557, 1822, 2032
BtgI	CCRYGG	1 cut(s)	351
BtgZI	GCGATG	1 cut(s)	240
BtsCI	GGATG	5 cut(s)	593, 876, 1328, 1496, 1498
BtsI	GCAGTG	1 cut(s)	1903
BtsIMutI	CAGTG	3 cut(s)	579, 1057, 1903
BveI	ACCTGC	2 cut(s)	1345, 1440
Cac8I	GCNNGC	6 cut(s)	55, 135, 852, 1027, 1447, 1848
CaiI	CAGNNNCTG	2 cut(s)	156, 193
CciI	TCATGA	1 cut(s)	460
CfoI	GCGC	2 cut(s)	327, 1451
Cfr10I	RCCGGY	3 cut(s)	1987, 2008, 2184
Cfr13I	GGNCC	8 cut(s)	190, 874, 875, 1556, 1653, 1795, 2104, 2187
CpoI	CGGWCCG	1 cut(s)	2187
CseI	GACGC	2 cut(s)	12, 1839
Csp6I	GTAC	3 cut(s)	232, 1472, 1783
CspAI	ACCGGT	2 cut(s)	2008, 2184
CspI	CGGWCCG	1 cut(s)	2187
CviQI	GTAC	3 cut(s)	232, 1472, 1783
DdeI	CTNAG	6 cut(s)	243, 1152, 1224, 1278, 1293, 1392
DrdI	GACNNNNNNGTC	1 cut(s)	1793
DseDI	GACNNNNNNGTC	1 cut(s)	1793
EaeI	YGGCCR	5 cut(s)	18, 92, 118, 1381, 2030
EagI	CGGCCG	3 cut(s)	18, 92, 118
Eam1104I	CTCTTC	1 cut(s)	1131
EarI	CTCTTC	1 cut(s)	1131
EciI	GGCGGA	4 cut(s)	76, 189, 1882, 2009
EclXI	CGGCCG	3 cut(s)	18, 92, 118
Eco130I	CCWWGG	5 cut(s)	351, 660, 1076, 1689, 1771
Eco147I	AGGCCT	1 cut(s)	1822
Eco24I	GRGCYC	2 cut(s)	266, 878
Eco31I	GGTCTC	1 cut(s)	1338
Eco32I	GATATC	1 cut(s)	1639
Eco47I	GGWCC	4 cut(s)	1653, 1795, 2104, 2187
Eco52I	CGGCCG	3 cut(s)	18, 92, 118
Eco57I	CTGAAG	2 cut(s)	396, 476
Eco72I	CACGTG	3 cut(s)	39, 69, 101
Eco88I	CYCGRG	1 cut(s)	1876
Eco91I	GGTNACC	2 cut(s)	445, 1427
EcoO109I	RGGNCCY	2 cut(s)	190, 1795
EcoO65I	GGTNACC	2 cut(s)	445, 1427
EcoRI	GAATTC	1 cut(s)	928
EcoRII	CCWGG	2 cut(s)	1973, 2149
EcoRV	GATATC	1 cut(s)	1639
EcoT14I	CCWWGG	5 cut(s)	351, 660, 1076, 1689, 1771
EcoT22I	ATGCAT	2 cut(s)	1262, 1374
EcoT38I	GRGCYC	2 cut(s)	266, 878
ErhI	CCWWGG	5 cut(s)	351, 660, 1076, 1689, 1771
Esp3I	CGTCTC	2 cut(s)	30, 118
FalI	AAGNNNNNCTT	2 cut(s)	644, 676
FaqI	GGGAC	1 cut(s)	92
FokI	GGATG	5 cut(s)	600, 883, 1315, 1485, 1503
FriOI	GRGCYC	2 cut(s)	266, 878
FspBI	CTAG	4 cut(s)	1133, 1436, 1772, 1937
GlaI	GCGC	2 cut(s)	326, 1450
GsuI	CTGGAG	4 cut(s)	1140, 1266, 1362, 1682
HaeII	RGCGCY	1 cut(s)	328
HaeIII	GGCC	9 cut(s)	20, 94, 120, 192, 876, 1383, 1557, 1822, 2032
HapII	CCGG	7 cut(s)	91, 121, 1988, 2009, 2102, 2185, 2190
HgaI	GACGC	2 cut(s)	12, 1839
HhaI	GCGC	2 cut(s)	327, 1451
Hin1I	GRCGYC	2 cut(s)	1302, 1850
Hin6I	GCGC	2 cut(s)	325, 1449
HinP1I	GCGC	2 cut(s)	325, 1449
HincII	GTYRAC	1 cut(s)	1405
HindII	GTYRAC	1 cut(s)	1405
HindIII	AAGCTT	3 cut(s)	522, 774, 1195
HinfI	GANTC	9 cut(s)	310, 802, 986, 1387, 1401, 1744, 1856, 1978, 2154
HpaII	CCGG	7 cut(s)	91, 121, 1988, 2009, 2102, 2185, 2190
HphI	GGTGA	6 cut(s)	457, 965, 1421, 1724, 1753, 2084
Hpy166II	GTNNAC	3 cut(s)	1405, 1708, 2092
Hpy188I	TCNGA	6 cut(s)	985, 1368, 1684, 1758, 1855, 2111
Hpy8I	GTNNAC	3 cut(s)	1405, 1708, 2092
Hpy99I	CGWCG	2 cut(s)	50, 77
HpyAV	CCTTC	8 cut(s)	1106, 1261, 1537, 1786, 1812, 1812, 1937, 2108
HpyCH4III	ACNGT	3 cut(s)	1052, 1723, 1736
HpyCH4IV	ACGT	4 cut(s)	38, 68, 100, 1302
HpyF3I	CTNAG	6 cut(s)	243, 1152, 1224, 1278, 1293, 1392
HpySE526I	ACGT	4 cut(s)	38, 68, 100, 1302
Hsp92I	GRCGYC	2 cut(s)	1302, 1850
HspAI	GCGC	2 cut(s)	325, 1449
Kpn2I	TCCGGA	2 cut(s)	2101, 2189
LmnI	GCTCC	3 cut(s)	1115, 1439, 1665
Lsp1109I	GCAGC	3 cut(s)	162, 1454, 1478
LweI	GCATC	5 cut(s)	454, 754, 1076, 1198, 1359
MaeI	CTAG	4 cut(s)	1133, 1436, 1772, 1937
MaeII	ACGT	4 cut(s)	38, 68, 100, 1302
MaeIII	GTNAC	5 cut(s)	64, 96, 427, 445, 1427
MbiI	CCGCTC	1 cut(s)	1881
MfeI	CAATTG	1 cut(s)	768
MflI	RGATCY	7 cut(s)	176, 290, 753, 859, 1693, 1758, 2076
MhlI	GDGCHC	4 cut(s)	266, 878, 1036, 1877
MlsI	TGGCCA	2 cut(s)	1383, 2032
MluNI	TGGCCA	2 cut(s)	1383, 2032
MlyI	GAGTC	2 cut(s)	1410, 1865
MmeI	TCCRAC	3 cut(s)	848, 1082, 1707
Mox20I	TGGCCA	2 cut(s)	1383, 2032
Mph1103I	ATGCAT	2 cut(s)	1262, 1374
MroI	TCCGGA	2 cut(s)	2101, 2189
MroXI	GAANNNNTTC	2 cut(s)	755, 806
MscI	TGGCCA	2 cut(s)	1383, 2032
MseI	TTAA	6 cut(s)	161, 330, 383, 1314, 1581, 1959
MslI	CAYNNNNRTG	1 cut(s)	1583
Msp20I	TGGCCA	2 cut(s)	1383, 2032
MspA1I	CMGCKG	1 cut(s)	1445
MspCI	CTTAAG	1 cut(s)	160
MspI	CCGG	7 cut(s)	91, 121, 1988, 2009, 2102, 2185, 2190
MspR9I	CCNGG	3 cut(s)	91, 1975, 2151
MunI	CAATTG	1 cut(s)	768
Mva1269I	GAATGC	1 cut(s)	183
MvaI	CCWGG	2 cut(s)	1975, 2151
MvnI	CGCG	2 cut(s)	23, 1861
NciI	CCSGG	1 cut(s)	91
NcoI	CCATGG	1 cut(s)	351
NlaIV	GGNNCC	5 cut(s)	178, 292, 876, 1998, 2078
NmuCI	GTSAC	5 cut(s)	64, 96, 427, 445, 1427
NsiI	ATGCAT	2 cut(s)	1262, 1374
NspI	RCATGY	5 cut(s)	61, 1029, 1151, 1206, 1325
NspV	TTCGAA	1 cut(s)	1483
PaeI	GCATGC	1 cut(s)	1029
PaeR7I	CTCGAG	1 cut(s)	1876
PagI	TCATGA	1 cut(s)	460
PaqCI	CACCTGC	2 cut(s)	1345, 1440
PceI	AGGCCT	1 cut(s)	1822
PciI	ACATGT	1 cut(s)	1202
PctI	GAATGC	1 cut(s)	183
PdmI	GAANNNNTTC	2 cut(s)	755, 806
PfeI	GAWTC	7 cut(s)	310, 802, 986, 1387, 1744, 1978, 2154
PinAI	ACCGGT	2 cut(s)	2008, 2184
PleI	GAGTC	2 cut(s)	1409, 1864
PmaCI	CACGTG	3 cut(s)	39, 69, 101
PmlI	CACGTG	3 cut(s)	39, 69, 101
PpsI	GAGTC	2 cut(s)	1409, 1864
Ppu21I	YACGTR	3 cut(s)	39, 69, 101
PpuMI	RGGWCCY	1 cut(s)	1795
PscI	ACATGT	1 cut(s)	1202
PshAI	GACNNNNGTC	1 cut(s)	1917
PshBI	ATTAAT	1 cut(s)	1314
Psp5II	RGGWCCY	1 cut(s)	1795
Psp6I	CCWGG	2 cut(s)	1973, 2149
PspCI	CACGTG	3 cut(s)	39, 69, 101
PspEI	GGTNACC	2 cut(s)	445, 1427
PspGI	CCWGG	2 cut(s)	1973, 2149
PspN4I	GGNNCC	5 cut(s)	178, 292, 876, 1998, 2078
PspOMI	GGGCCC	1 cut(s)	874
PspPI	GGNCC	8 cut(s)	190, 874, 875, 1556, 1653, 1795, 2104, 2187
PspPPI	RGGWCCY	1 cut(s)	1795
PspXI	VCTCGAGB	1 cut(s)	1876
PstNI	CAGNNNCTG	2 cut(s)	156, 193
PsuI	RGATCY	7 cut(s)	176, 290, 753, 859, 1693, 1758, 2076
PvuII	CAGCTG	1 cut(s)	1445
RsaI	GTAC	3 cut(s)	233, 1473, 1784
RsaNI	GTAC	3 cut(s)	232, 1472, 1783
RseI	CAYNNNNRTG	1 cut(s)	1583
Rsr2I	CGGWCCG	1 cut(s)	2187
RsrII	CGGWCCG	1 cut(s)	2187
SaqAI	TTAA	6 cut(s)	161, 330, 383, 1314, 1581, 1959
Sau96I	GGNCC	8 cut(s)	190, 874, 875, 1556, 1653, 1795, 2104, 2187
ScaI	AGTACT	1 cut(s)	233
SchI	GAGTC	2 cut(s)	1410, 1865
ScrFI	CCNGG	3 cut(s)	91, 1975, 2151
SduI	GDGCHC	4 cut(s)	266, 878, 1036, 1877
SfaNI	GCATC	5 cut(s)	454, 754, 1076, 1198, 1359
SfcI	CTRYAG	1 cut(s)	235
Sfr274I	CTCGAG	1 cut(s)	1876
SfuI	TTCGAA	1 cut(s)	1483
SinI	GGWCC	4 cut(s)	1653, 1795, 2104, 2187
SlaI	CTCGAG	1 cut(s)	1876
SmiMI	CAYNNNNRTG	1 cut(s)	1583
SmlI	CTYRAG	2 cut(s)	160, 1876
SmoI	CTYRAG	2 cut(s)	160, 1876
SphI	GCATGC	1 cut(s)	1029
SseBI	AGGCCT	1 cut(s)	1822
SspMI	CTAG	4 cut(s)	1133, 1436, 1772, 1937
StuI	AGGCCT	1 cut(s)	1822
StyD4I	CCNGG	3 cut(s)	89, 1973, 2149
StyI	CCWWGG	5 cut(s)	351, 660, 1076, 1689, 1771
TaaI	ACNGT	3 cut(s)	1052, 1723, 1736
TaiI	ACGT	4 cut(s)	41, 71, 103, 1305
TaqI	TCGA	7 cut(s)	313, 1455, 1483, 1644, 1779, 1877, 2045
TaqII	GACCGA	1 cut(s)	52
TatI	WGTACW	2 cut(s)	231, 1471
TauI	GCSGC	9 cut(s)	11, 23, 53, 117, 120, 1884, 1943, 1994, 2142
TfiI	GAWTC	7 cut(s)	310, 802, 986, 1387, 1744, 1978, 2154
Tru1I	TTAA	6 cut(s)	161, 330, 383, 1314, 1581, 1959
Tru9I	TTAA	6 cut(s)	161, 330, 383, 1314, 1581, 1959
TscAI	CASTG	3 cut(s)	586, 1057, 1903
TseFI	GTSAC	5 cut(s)	64, 96, 427, 445, 1427
TseI	GCWGC	4 cut(s)	5, 150, 1442, 1466
Tsp45I	GTSAC	5 cut(s)	64, 96, 427, 445, 1427
TspDTI	ATGAA	7 cut(s)	616, 764, 777, 815, 1487, 1556, 1894
TspGWI	ACGGA	2 cut(s)	142, 1939
TspRI	CASTG	3 cut(s)	586, 1057, 1903
Vha464I	CTTAAG	1 cut(s)	160
VpaK11BI	GGWCC	4 cut(s)	1653, 1795, 2104, 2187
VspI	ATTAAT	1 cut(s)	1314
XapI	RAATTY	3 cut(s)	623, 928, 2122
XbaI	TCTAGA	1 cut(s)	1132
XceI	RCATGY	5 cut(s)	61, 1029, 1151, 1206, 1325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	853
XhoI	CTCGAG	1 cut(s)	1876
XmaJI	CCTAGG	1 cut(s)	1771
XmnI	GAANNNNTTC	2 cut(s)	755, 806
XspI	CTAG	4 cut(s)	1133, 1436, 1772, 1937
ZraI	GACGTC	1 cut(s)	1303
ZrmI	AGTACT	1 cut(s)	233
Zsp2I	ATGCAT	2 cut(s)	1262, 1374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.