pycom02g26500

mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0005851
Physical Location & Seq
Forward (+)
24265101 .. 24273274
8174 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g26500.1

Sequence Viewer

Length: 2559 bp
ATGGCTGGAAAGTCGAATAAGGGGAGGAACCGTAGAGGTGTGAGCAATGCTGTGGTCCCATCTGATGCTCCTGTGAAAGATAACTCAAGTGCTTCAGAGCCCATTAAAGCTGAAGACAATGGTGTTCCAGCTGTTGAAGAATCAACTGATGCTAGTCTGGAGGTAAAGGAGTCTGAAACAGAAAATTCAATCAGCCATACTAAGCAAGGTGACCTTCATCTGTACCCAGTTTCTGTCAAGACACAAAGTGGCGAGAAGCTTGACCTACAATTGAACCCAGGAGACTCTGTTATGGATATAAGACAATTTCTGCTTGATGCGCCAGAGACATGTTTCTTCACATGTTATGACTTATTGCTACACACAAAGGATGGCTCCACTCATCATTTGGAAGACTTTAATGAAATTTCTGAAGTTGCTGATATTACCATTGGTGGCTGTTCCTTGGAGATGGTTCCTGCTTTATATGATGATAGATCTATACGGGCTCATGTTCATCGTACGAGAGAATTGCTTTCCCTTTCTACACTTCATGCGTCACTATCGACATCACTTGCATTACAGTATGAGACTGCACAAAACAAAGTGGCGAGCCCTGGAGATACTGTGAAAACTGAGGTCCCAGAGCTTGATGGTTTGGGTTTTATGGAGGACATTGCTGGTTCATTGAGCAATTTGCTATCTTCACCCTCAAAAGAGATCAAATGCGTGGAGAGTATGGTGTTTTCATCCTTCAATCCTCCACCAAGCTATAGAAGGCTCGTTGGGGATTTGATTTATTTGGATGTAGTAACATTGGAGGGTAATAAACACTGCATTACTGGGACTACAAAAATGTTCTATGTCAATTCGAGCACGGGGAACACCCTTGACCCTAAGCTGAGTAAAAGTAATTCCGAAGCAACCACACTTGTTGGACTTTTGCAAAGGATTAGCTCTAAGTTCAAGAAAGCTTTTCGTGAAATTTTGGAGTGGAGGGCATCTGCACATCCTTTTGAAAATGTGCAGTCTTTATTGCCACCAAATTCATGGCTAGGGTTGTATCCAGTTCCAGATCACAAGCGTGATGCAGCTAGAGCAGAGGATTCCCTTACTCTTTCATATGGGAGTGAGCTAATTGGCATGCAAAGGGATTGGAATGAGGAGTTGCAATCTTGTAGGGAATTTCCGCATACAACTCCTCAGGAAAGAATTTTGCGGGATAGGGCTCTGTACAAAGTGACTTCAGACTTTGTTGATGCAGCTATTAGTGGTGCTATTGGAGTTATTAGTAGATGCATACCTCCTATAAACCCAACCGATCCAGAGTGCTTCCACATGTATGTTCACAATAATATATTCTTCAGTTTTGCTGTTGATGCGGACCTTGAGCAACTGTTTAAGAAACATGCATCGTATTCTAGTCCAAAGATAGGGGCCACTGGTTTTTTACACAGTTCTGAGAAGGCTCCTGACAGTTTGTTGCATGGAGAGAGTGCAATTCCCAATGGAGAAAAATGCAAAGGATCAAGTACGGTTGATGATGCCACTGAATCCTCTACTGATGTTTCTGCCGATACTCAATTGGGTGAAACTGAGCAGGCTACTTATGCTTCTGCAAATAATGATTTGAAAGGCACTAAGGCGTACCAGGAAGCTGATGTCTCTGGACTTTATAATCTTGCTATGGCCATAATCGATTACAGGGGGCACAGAGTAATAGCTCAGAGTGTTTTACCGGGCATTCTTCAAGGGGATAAATCAGACTCTCTTCTGTACGGTTCTGTTGATAATGGCAAGAAAATATGCTGGAATGAAGAGTTTCATTCCAAGGTGGTGGAAGCAGCTAAGTGCCTTCATCTGAAAGAGCATACAGTCCTGGATGGATCTGGAAATGTTTTCAGATTGGCTGCACCGGTGGAATGCAAGGGTATTGTTGGTAGTGATGACAGGCATTATCTCCTCGACTTGATGAGAGTGACTCCTCGTGATGCAAATTTCACTGGATCTGGGTCCAGATTTTGTATCTTGAGGCCAGAACTAATTACTGTCTATTCCCAGGCCCAAGCTGCTGAGAAACCAAAGTCTAAGTCTAAAGATGGAGAAGGTATTATCACCACTGATTCTTCAGTCATCACTGATGCTAAGCAGGACATAACGGAAGAAGGGAAAGCCACAGATGCACAAGAAAGTGCGTCTCCAGCTCCACACACTGATAGCTCTGATCCATGTGAAGAAATTCTTTTTAACCCTAATGTCTTCACTGAGTTTAAGTTGGCTGGAAATGAGGAGGAGATAGCAGAAGATGAAGGAAATGTGAGGAAAGCCAGTTTGTATCTTACAGATGTTGTGCTTCCAAAATTTATACAAGACCTCTGCACGCTTGAAGTATCACCTATGGACGGGCAGACACTAACTGAAGCACTCCATGCTCATGGAATTAATGTTCGCTATATTGGAAAAGTGGCTGATGGGACCAGACATTTACCTCATCTTTGGGATCGTTGCTCCAATGAGATAATGGTTAGATCTGCCAAGCACATTCTCAAGGATGCCTTGAGAGAAACAGACGATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLU CLU_N DUF727 TPR_10 TPR_12 eIF3_p135

Protein Analysis

853

Amino Acids

93.38

Weight (kDa)

5.09

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLU_N PF15044 95 - 171 1.1e-14 Mitochondrial function, CLU-N-term
CLU PF13236 378 - 460 7.7e-26 Clustered mitochondria
CLU PF13236 515 - 660 4.1e-47 Clustered mitochondria
eIF3_p135 PF12807 790 - 850 2e-19 Translation initiation factor eIF3 subunit 135
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1656
AciI CCGC 3 cut(s) 1169, 1198, 1361
AclWI GGATC 6 cut(s) 1295, 1513, 1873, 1993, 2198, 2487
AcoI YGGCCR 1 cut(s) 1668
AcsI RAATTY 9 cut(s) 184, 405, 963, 1024, 1163, 1191, 1975, 2217, 2339
AcuI CTGAAG 7 cut(s) 78, 132, 432, 1209, 1327, 2091, 2418
AdeI CACNNNGTG 1 cut(s) 248
AfaI GTAC 6 cut(s) 224, 502, 1214, 1513, 1628, 1757
AfiI CCNNNNNNNGG 2 cut(s) 1412, 2381
AflIII ACRYGT 3 cut(s) 329, 341, 1317
AgeI ACCGGT 1 cut(s) 1894
AgsI TTSAA 9 cut(s) 137, 189, 274, 736, 946, 998, 1612, 1730, 2366
AjnI CCWGG 5 cut(s) 277, 595, 1629, 1857, 2037
AleI CACNNNNGTG 1 cut(s) 1062
AloI GAACNNNNNNTCC 2 cut(s) 2409, 2441
Alw21I GWGCWC 1 cut(s) 857
Alw26I GTCTC 5 cut(s) 276, 320, 563, 1648, 2181
AlwI GGATC 6 cut(s) 1295, 1513, 1873, 1993, 2198, 2487
AlwNI CAGNNNCTG 1 cut(s) 233
AoxI GGCC 4 cut(s) 1416, 1668, 2012, 2040
ApeKI GCWGC 5 cut(s) 1070, 1241, 1823, 1889, 2048
ApoI RAATTY 9 cut(s) 184, 405, 963, 1024, 1163, 1191, 1975, 2217, 2339
ArsI GACNNNNNNTTYG 2 cut(s) 2054, 2086
AseI ATTAAT 1 cut(s) 2421
AsiGI ACCGGT 1 cut(s) 1894
Asp700I GAANNNNTTC 2 cut(s) 1800, 2217
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 7 cut(s) 55, 619, 1363, 1416, 1992, 2041, 2454
AsuC2I CCSGG 1 cut(s) 1719
AsuHPI GGTGA 5 cut(s) 221, 678, 1580, 2086, 2364
AvaII GGWCC 5 cut(s) 55, 619, 1363, 1992, 2454
AxyI CCTNAGG 1 cut(s) 1182
BaeGI GKGCMC 1 cut(s) 1692
BalI TGGCCA 1 cut(s) 1670
BanII GRGCYC 4 cut(s) 102, 490, 596, 1210
BauI CACGAG 1 cut(s) 1965
BbsI GAAGAC 3 cut(s) 120, 399, 2230
Bbv12I GWGCWC 1 cut(s) 857
BbvI GCAGC 5 cut(s) 1082, 1253, 1835, 1876, 2035
BccI CCATC 7 cut(s) 67, 365, 445, 626, 1856, 2072, 2444
BcgI CGANNNNNNTGC 2 cut(s) 493, 527
BciT130I CCWGG 5 cut(s) 279, 597, 1631, 1859, 2039
BciVI GTATCC 1 cut(s) 1053
BcnI CCSGG 1 cut(s) 1719
BcoDI GTCTC 5 cut(s) 276, 320, 563, 1648, 2181
BfaI CTAG 4 cut(s) 153, 1034, 1074, 1401
BfmI CTRYAG 1 cut(s) 751
BfuI GTATCC 1 cut(s) 1053
BglII AGATCT 2 cut(s) 476, 2507
BisI GCNGC 5 cut(s) 1071, 1242, 1824, 1890, 2049
BlpI GCTNAGC 1 cut(s) 2124
BlsI GCNGC 5 cut(s) 1072, 1243, 1825, 1891, 2050
Bme1390I CCNGG 6 cut(s) 279, 597, 1631, 1719, 1859, 2039
Bme18I GGWCC 5 cut(s) 55, 619, 1363, 1992, 2454
BmgT120I GGNCC 7 cut(s) 55, 619, 1363, 1416, 1992, 2041, 2454
BmiI GGNNCC 9 cut(s) 29, 57, 376, 456, 621, 1417, 1449, 1993, 2455
BmrFI CCNGG 6 cut(s) 279, 597, 1631, 1719, 1859, 2039
BmrI ACTGGG 2 cut(s) 221, 831
BmuI ACTGGG 2 cut(s) 221, 831
BpiI GAAGAC 3 cut(s) 120, 399, 2230
BplI GAGNNNNNCTC 2 cut(s) 1945, 1977
BpmI CTGGAG 3 cut(s) 179, 618, 2163
Bpu10I CCTNAGC 1 cut(s) 876
Bpu1102I GCTNAGC 1 cut(s) 2124
BpuEI CTTGAG 5 cut(s) 70, 1388, 2029, 2510, 2557
BpuMI CCSGG 1 cut(s) 1719
Bsa29I ATCGAT 2 cut(s) 1677, 2554
BsaJI CCNNGG 5 cut(s) 277, 444, 595, 1809, 2037
BsaWI WCCGGW 1 cut(s) 1894
BsaXI ACNNNNNCTCC 6 cut(s) 16, 46, 273, 303, 591, 621
Bsc4I CCNNNNNNNGG 2 cut(s) 1412, 2381
Bse118I RCCGGY 1 cut(s) 1894
Bse1I ACTGG 6 cut(s) 227, 826, 1046, 1426, 1987, 2307
Bse21I CCTNAGG 1 cut(s) 1182
Bse3DI GCAATG 2 cut(s) 52, 654
BseBI CCWGG 5 cut(s) 279, 597, 1631, 1859, 2039
BseCI ATCGAT 2 cut(s) 1677, 2554
BseDI CCNNGG 5 cut(s) 277, 444, 595, 1809, 2037
BseGI GGATG 6 cut(s) 376, 728, 790, 988, 1867, 2536
BseLI CCNNNNNNNGG 2 cut(s) 1412, 2381
BseMI GCAATG 2 cut(s) 52, 654
BseMII CTCAG 8 cut(s) 606, 872, 1196, 1431, 1566, 1718, 2043, 2235
BseNI ACTGG 6 cut(s) 227, 826, 1046, 1426, 1987, 2307
BseRI GAGGAG 6 cut(s) 1157, 1170, 1931, 1953, 2282, 2285
BseSI GKGCMC 1 cut(s) 1692
BseXI GCAGC 5 cut(s) 1082, 1253, 1835, 1876, 2035
BsgI GTGCAG 5 cut(s) 558, 969, 1025, 1875, 2341
Bsh1285I CGRYCG 1 cut(s) 2554
BshFI GGCC 4 cut(s) 1418, 1670, 2014, 2042
BshTI ACCGGT 1 cut(s) 1894
BshVI ATCGAT 2 cut(s) 1677, 2554
BsiEI CGRYCG 1 cut(s) 2554
BsiHKAI GWGCWC 1 cut(s) 857
BsiSI CCGG 2 cut(s) 1718, 1895
BsiWI CGTACG 1 cut(s) 500
BslFI GGGAC 4 cut(s) 41, 605, 838, 2467
BslI CCNNNNNNNGG 2 cut(s) 1412, 2381
BsmAI GTCTC 5 cut(s) 276, 320, 563, 1648, 2181
BsmBI CGTCTC 1 cut(s) 2181
BsmFI GGGAC 4 cut(s) 41, 605, 838, 2467
BsmI GAATGC 2 cut(s) 1722, 1907
BsnI GGCC 4 cut(s) 1418, 1670, 2014, 2042
Bsp1286I GDGCHC 6 cut(s) 102, 490, 596, 857, 1210, 1692
Bsp1407I TGTACA 1 cut(s) 1212
Bsp1720I GCTNAGC 1 cut(s) 2124
BspACI CCGC 3 cut(s) 1169, 1198, 1361
BspANI GGCC 4 cut(s) 1418, 1670, 2014, 2042
BspCNI CTCAG 8 cut(s) 607, 873, 1195, 1432, 1567, 1717, 2044, 2236
BspDI ATCGAT 2 cut(s) 1677, 2554
BspLI GGNNCC 9 cut(s) 29, 57, 376, 456, 621, 1417, 1449, 1993, 2455
BspPI GGATC 6 cut(s) 1295, 1513, 1873, 1993, 2198, 2487
BsrDI GCAATG 2 cut(s) 52, 654
BsrFI RCCGGY 1 cut(s) 1894
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 6 cut(s) 227, 826, 1046, 1426, 1987, 2307
BssAI RCCGGY 1 cut(s) 1894
BssECI CCNNGG 5 cut(s) 277, 444, 595, 1809, 2037
BssSI CACGAG 1 cut(s) 1965
BssT1I CCWWGG 2 cut(s) 444, 1809
Bst2BI CACGAG 1 cut(s) 1965
Bst2UI CCWGG 5 cut(s) 279, 597, 1631, 1859, 2039
Bst6I CTCTTC 2 cut(s) 1755, 1791
BstAPI GCANNNNNTGC 1 cut(s) 2408
BstAUI TGTACA 1 cut(s) 1212
BstC8I GCNNGC 4 cut(s) 592, 1124, 1581, 2360
BstEII GGTNACC 1 cut(s) 209
BstF5I GGATG 6 cut(s) 376, 728, 790, 988, 1867, 2536
BstHHI GCGC 1 cut(s) 322
BstMAI GTCTC 5 cut(s) 276, 320, 563, 1648, 2181
BstMCI CGRYCG 1 cut(s) 2554
BstMWI GCNNNNNNNGC 8 cut(s) 319, 1076, 1358, 1589, 2048, 2159, 2180, 2408
BstNI CCWGG 5 cut(s) 279, 597, 1631, 1859, 2039
BstNSI RCATGY 5 cut(s) 333, 345, 1126, 1321, 1391
BstPI GGTNACC 1 cut(s) 209
BstSCI CCNGG 6 cut(s) 277, 595, 1629, 1717, 1857, 2037
BstSFI CTRYAG 1 cut(s) 751
BstSLI GKGCMC 1 cut(s) 1692
BstV1I GCAGC 5 cut(s) 1082, 1253, 1835, 1876, 2035
BstV2I GAAGAC 3 cut(s) 120, 399, 2230
BstX2I RGATCY 4 cut(s) 476, 1865, 1985, 2507
BstXI CCANNNNNNTGG 3 cut(s) 1029, 1816, 2414
BstYI RGATCY 4 cut(s) 476, 1865, 1985, 2507
Bsu15I ATCGAT 2 cut(s) 1677, 2554
Bsu36I CCTNAGG 1 cut(s) 1182
BsuI GTATCC 1 cut(s) 1053
BsuRI GGCC 4 cut(s) 1418, 1670, 2014, 2042
BsuTUI ATCGAT 2 cut(s) 1677, 2554
BtsCI GGATG 6 cut(s) 376, 728, 790, 988, 1867, 2536
BtsI GCAGTG 1 cut(s) 811
BtsIMutI CAGTG 8 cut(s) 811, 1419, 1527, 1980, 2097, 2115, 2190, 2241
Cac8I GCNNGC 4 cut(s) 592, 1124, 1581, 2360
CaiI CAGNNNCTG 1 cut(s) 233
CfoI GCGC 1 cut(s) 322
Cfr10I RCCGGY 1 cut(s) 1894
Cfr13I GGNCC 7 cut(s) 55, 619, 1363, 1416, 1992, 2041, 2454
ClaI ATCGAT 2 cut(s) 1677, 2554
CseI GACGC 2 cut(s) 525, 2163
Csp6I GTAC 6 cut(s) 223, 501, 1213, 1512, 1627, 1756
CspAI ACCGGT 1 cut(s) 1894
CspCI CAANNNNNGTGG 2 cut(s) 895, 930
CviQI GTAC 6 cut(s) 223, 501, 1213, 1512, 1627, 1756
DraIII CACNNNGTG 1 cut(s) 248
EaeI YGGCCR 1 cut(s) 1668
Eam1104I CTCTTC 2 cut(s) 1755, 1791
EarI CTCTTC 2 cut(s) 1755, 1791
Eco130I CCWWGG 2 cut(s) 444, 1809
Eco24I GRGCYC 4 cut(s) 102, 490, 596, 1210
Eco47I GGWCC 5 cut(s) 55, 619, 1363, 1992, 2454
Eco57I CTGAAG 7 cut(s) 78, 132, 432, 1209, 1327, 2091, 2418
Eco81I CCTNAGG 1 cut(s) 1182
Eco91I GGTNACC 1 cut(s) 209
EcoO109I RGGNCCY 1 cut(s) 619
EcoO65I GGTNACC 1 cut(s) 209
EcoRII CCWGG 5 cut(s) 277, 595, 1629, 1857, 2037
EcoT14I CCWWGG 2 cut(s) 444, 1809
EcoT22I ATGCAT 2 cut(s) 1280, 1393
EcoT38I GRGCYC 4 cut(s) 102, 490, 596, 1210
ErhI CCWWGG 2 cut(s) 444, 1809
Esp3I CGTCTC 1 cut(s) 2181
FalI AAGNNNNNCTT 6 cut(s) 198, 230, 2205, 2237, 2519, 2551
FaqI GGGAC 4 cut(s) 41, 605, 838, 2467
FauI CCCGC 1 cut(s) 1191
FauNDI CATATG 1 cut(s) 1102
Fnu4HI GCNGC 5 cut(s) 1071, 1242, 1824, 1890, 2049
FokI GGATG 6 cut(s) 383, 715, 797, 975, 1874, 2543
FriOI GRGCYC 4 cut(s) 102, 490, 596, 1210
Fsp4HI GCNGC 5 cut(s) 1071, 1242, 1824, 1890, 2049
FspBI CTAG 4 cut(s) 153, 1034, 1074, 1401
GlaI GCGC 1 cut(s) 321
GluI GCNGC 5 cut(s) 1071, 1242, 1824, 1890, 2049
GsuI CTGGAG 3 cut(s) 179, 618, 2163
HaeIII GGCC 4 cut(s) 1418, 1670, 2014, 2042
HapII CCGG 2 cut(s) 1718, 1895
HgaI GACGC 2 cut(s) 525, 2163
HhaI GCGC 1 cut(s) 322
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HindIII AAGCTT 2 cut(s) 257, 951
HinfI GANTC 8 cut(s) 140, 170, 284, 1085, 1532, 1745, 1960, 2102
HpaII CCGG 2 cut(s) 1718, 1895
HphI GGTGA 5 cut(s) 221, 678, 1580, 2086, 2364
Hpy166II GTNNAC 1 cut(s) 1327
Hpy8I GTNNAC 1 cut(s) 1327
HpyAV CCTTC 8 cut(s) 224, 742, 750, 1438, 1844, 2078, 2138, 2282
HpyF10VI GCNNNNNNNGC 8 cut(s) 319, 1076, 1358, 1589, 2048, 2159, 2180, 2408
HspAI GCGC 1 cut(s) 320
LmnI GCTCC 5 cut(s) 73, 380, 1453, 2188, 2492
Lsp1109I GCAGC 5 cut(s) 1082, 1253, 1835, 1876, 2035
MaeI CTAG 4 cut(s) 153, 1034, 1074, 1401
MaeIII GTNAC 5 cut(s) 209, 537, 790, 1219, 1957
MfeI CAATTG 2 cut(s) 269, 1562
MflI RGATCY 4 cut(s) 476, 1865, 1985, 2507
MhlI GDGCHC 6 cut(s) 102, 490, 596, 857, 1210, 1692
MlsI TGGCCA 1 cut(s) 1670
MluNI TGGCCA 1 cut(s) 1670
MlyI GAGTC 4 cut(s) 179, 278, 1739, 1954
MmeI TCCRAC 1 cut(s) 895
Mox20I TGGCCA 1 cut(s) 1670
Mph1103I ATGCAT 2 cut(s) 1280, 1393
MroXI GAANNNNTTC 2 cut(s) 1800, 2217
MscI TGGCCA 1 cut(s) 1670
MseI TTAA 6 cut(s) 105, 399, 1380, 2226, 2250, 2421
MslI CAYNNNNRTG 3 cut(s) 1062, 1320, 2412
Msp20I TGGCCA 1 cut(s) 1670
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 2 cut(s) 1718, 1895
MspR9I CCNGG 6 cut(s) 279, 597, 1631, 1719, 1859, 2039
MunI CAATTG 2 cut(s) 269, 1562
Mva1269I GAATGC 2 cut(s) 1722, 1907
MvaI CCWGG 5 cut(s) 279, 597, 1631, 1859, 2039
MwoI GCNNNNNNNGC 8 cut(s) 319, 1076, 1358, 1589, 2048, 2159, 2180, 2408
NciI CCSGG 1 cut(s) 1719
NdeI CATATG 1 cut(s) 1102
NlaIV GGNNCC 9 cut(s) 29, 57, 376, 456, 621, 1417, 1449, 1993, 2455
NmuCI GTSAC 4 cut(s) 209, 537, 1219, 1957
NsiI ATGCAT 2 cut(s) 1280, 1393
NspI RCATGY 5 cut(s) 333, 345, 1126, 1321, 1391
OliI CACNNNNGTG 1 cut(s) 1062
PaeI GCATGC 1 cut(s) 1126
PciI ACATGT 3 cut(s) 329, 341, 1317
PctI GAATGC 2 cut(s) 1722, 1907
PdmI GAANNNNTTC 2 cut(s) 1800, 2217
PfeI GAWTC 4 cut(s) 140, 1085, 1532, 2102
Pfl23II CGTACG 1 cut(s) 500
PfoI TCCNGGA 1 cut(s) 1857
PinAI ACCGGT 1 cut(s) 1894
PkrI GCNGC 5 cut(s) 1072, 1243, 1825, 1891, 2050
Ple19I CGATCG 1 cut(s) 2554
PleI GAGTC 4 cut(s) 178, 278, 1739, 1954
PpsI GAGTC 4 cut(s) 178, 278, 1739, 1954
PpuMI RGGWCCY 1 cut(s) 619
PscI ACATGT 3 cut(s) 329, 341, 1317
PshBI ATTAAT 1 cut(s) 2421
PsiI TTATAA 1 cut(s) 1656
Psp5II RGGWCCY 1 cut(s) 619
Psp6I CCWGG 5 cut(s) 277, 595, 1629, 1857, 2037
PspEI GGTNACC 1 cut(s) 209
PspGI CCWGG 5 cut(s) 277, 595, 1629, 1857, 2037
PspLI CGTACG 1 cut(s) 500
PspN4I GGNNCC 9 cut(s) 29, 57, 376, 456, 621, 1417, 1449, 1993, 2455
PspPI GGNCC 7 cut(s) 55, 619, 1363, 1416, 1992, 2041, 2454
PspPPI RGGWCCY 1 cut(s) 619
PstNI CAGNNNCTG 1 cut(s) 233
PsuI RGATCY 4 cut(s) 476, 1865, 1985, 2507
PvuI CGATCG 1 cut(s) 2554
PvuII CAGCTG 1 cut(s) 131
RsaI GTAC 6 cut(s) 224, 502, 1214, 1513, 1628, 1757
RsaNI GTAC 6 cut(s) 223, 501, 1213, 1512, 1627, 1756
RseI CAYNNNNRTG 3 cut(s) 1062, 1320, 2412
SaqAI TTAA 6 cut(s) 105, 399, 1380, 2226, 2250, 2421
SatI GCNGC 5 cut(s) 1071, 1242, 1824, 1890, 2049
Sau96I GGNCC 7 cut(s) 55, 619, 1363, 1416, 1992, 2041, 2454
SchI GAGTC 4 cut(s) 179, 278, 1739, 1954
ScrFI CCNGG 6 cut(s) 279, 597, 1631, 1719, 1859, 2039
SduI GDGCHC 6 cut(s) 102, 490, 596, 857, 1210, 1692
SfcI CTRYAG 1 cut(s) 751
SgrAI CRCCGGYG 1 cut(s) 1894
SinI GGWCC 5 cut(s) 55, 619, 1363, 1992, 2454
SmiMI CAYNNNNRTG 3 cut(s) 1062, 1320, 2412
SmlI CTYRAG 5 cut(s) 85, 1367, 2008, 2525, 2536
SmoI CTYRAG 5 cut(s) 85, 1367, 2008, 2525, 2536
SphI GCATGC 1 cut(s) 1126
SsiI CCGC 3 cut(s) 1169, 1198, 1361
SspMI CTAG 4 cut(s) 153, 1034, 1074, 1401
StyD4I CCNGG 6 cut(s) 277, 595, 1629, 1717, 1857, 2037
StyI CCWWGG 2 cut(s) 444, 1809
TaqI TCGA 6 cut(s) 14, 545, 851, 1677, 1944, 2554
TatI WGTACW 1 cut(s) 1212
TfiI GAWTC 4 cut(s) 140, 1085, 1532, 2102
Tru1I TTAA 6 cut(s) 105, 399, 1380, 2226, 2250, 2421
Tru9I TTAA 6 cut(s) 105, 399, 1380, 2226, 2250, 2421
TscAI CASTG 8 cut(s) 818, 1426, 1534, 1987, 2104, 2122, 2197, 2248
TseFI GTSAC 4 cut(s) 209, 537, 1219, 1957
TseI GCWGC 5 cut(s) 1070, 1241, 1823, 1889, 2048
Tsp45I GTSAC 4 cut(s) 209, 537, 1219, 1957
TspGWI ACGGA 1 cut(s) 2153
TspRI CASTG 8 cut(s) 818, 1426, 1534, 1987, 2104, 2122, 2197, 2248
VpaK11BI GGWCC 5 cut(s) 55, 619, 1363, 1992, 2454
VspI ATTAAT 1 cut(s) 2421
XapI RAATTY 9 cut(s) 184, 405, 963, 1024, 1163, 1191, 1975, 2217, 2339
XceI RCATGY 5 cut(s) 333, 345, 1126, 1321, 1391
XcmI CCANNNNNNNNNTGG 3 cut(s) 385, 1026, 2497
XmnI GAANNNNTTC 2 cut(s) 1800, 2217
XspI CTAG 4 cut(s) 153, 1034, 1074, 1401
Zsp2I ATGCAT 2 cut(s) 1280, 1393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.