pycom07g00460

mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
440391 .. 451224
10834 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g00460.21

Sequence Viewer

Length: 3492 bp
ATGGATATAAGACAATTTCTGCTTGATGCGCCAGAGACATGTTTCTTCACATGTTATGACTTATTGCTACACACAAAGGATGGCCCCACTCATCATTTGGAAGACTTTAATGAAATTTCCGAAGTTGCTGATATTACCGTTGGTGGTTGCTCCTTGGAGATGGTTCCTGCTTTATATGATGATAGATCTATAAGGGCTCATGTTCATCGTACGAGAGAATTGCTTTCCCTTTCTACACTTCATGCATCACTATCGACGTCACTTGCATTACAGTATGAGACAGCACAAAACAAAGTGGCGAGCCCTGGAGATACTGTGAAAACTGAGGTCCCAGGGCTTGATGGTTTGGGTTTTATGGAGGATGTTGCTGGTTCATTGAGCAATTTGCTATCTTCACCCTCAAAAGAGATAAAATGTGTGGAGAGTATTGTGTTTTCATCCTTCAATCCTCCGCCAAGCTATAGAAGGCTTGTTGGGGATTTGATTTATTTGGATATAGTAACATTGGAGGGCAATAAACACTGTATTACTGGGACTACAAAAATGTTTTATGTCAATTCCAGCACGGGGAACACTCTTGACCCTAAGCCAAGTAAAAGTAATTGGGAAGCAACCACACTTGTTGGACTTTTGCAAAATGTTAGCTCTAAGTTCAAAAAAGCTTTTCGTGAAATTTTGGAGCGGAGGGCATCTGCACATCCTTTTGAAAATGTTCAGTCTTTGTTGCCACCAAATTCATGGCTAGGGTTATATCCAGTTCCAGATCACAAGCGTGATGCAGCTAGAGCAGAGGATGCCCTTACTCTTTCATACGGCAGTGAGCTAATTGGCATGCAAAGGGATTGGAATGAGGAGTTGCAATCTTGTAGGGAATTTCCACATACAACTCCTCAGGAAAGAATTTTGCGGGATAGGGCTCTATACAAAGTGACTTCAGACTTTGTTGATGCAGCTATTAGTGGTGCTATTGGAGTTATTAGTAGATGCATACCTCCTATAAACCCAACTGATCCAGAGTGCTTCCACATGTATGTTCACAATAATATATTCTTCAGTTTTGCGGTTGATGCGGACCTTGAGCAGCTGTCTAAGAAACATGCGTCAGATTCAAGTCCAAAGATAGGGGGCACTGGTTCTGTACACAGTTCTTCTGAGAAGGCTACTGACAATTTGTTGCATGGAGAGAGTGCAATTCCCAATAGAGAAAAATGCAAAGGATCAAGTACAATCGATGATGCGACAGAATCTTCCCCTGATGTTTCTGCCGAGACGCAATTGGGTGAAACCGAGCAGGCTACTTATGCTTCTGCAAATAATGATTTGAAAGGCACCAAGGCGTACCAGGAAGCTGATGTCTCTGGACTTTATAATCTTGCTATGGCCATAATCGATTACAGGGGGCATAGAGTAGTAGCTCAGAGTGTTTTACCGGGCATTCTTCAAGGGGATAAATCAGACTCTCTTCTATATGGTTCTGTTGATAATGGCAAGAAAATATGCTGGAATGAAGAGTTCCATTCCAAGGTGCTGGAAGCTGCTAAGCGCCTTCATCTTAAAGAGCACACAGTCCTTGATGGATCTGGAAATGTTTTCAGATTGGCTGCACCGGTGGAATGCAAGGGTATTGTTGGTAGTGATGACAGGCATTATCTCCTCGACTTGATGAGAGTGACTCCTCGTGATTCAAACTGCACTGGACCTGGGTCCAGATTTTGTATCTTGAGGCTGGAATTAATTACTGCCTATTGCCAGGCCCAAGCTGCAGAGAAACCAAAATCTAAGTCTAAAGATGGAGAAGGTCTTGTCACCACTGATTCTTCAGTCATCACTGATGCTAAGCAGGCCATAACGGAAGAAGGGAATGCCACAGACGCACAAGAAATTGCATCTCCACCTCCATCCACTGAAAGCTCTGATCCATGTGAAGAAATTCTTTTTAACCCTAATGTCTTCACCGAGTTTAAGTTGGCTGGAAATGAGGAGGAGATAGCAGAAGATGAAGGAAATGTGAGGAAAGCCAGTTTGTATCTTACAGATGTTGTGCTTCCAAAATTTATACAAGACCTCTGCACGCTTGAAGTATCACCCATGGACGGGCAGACGCTAACTGAAGCACTCCATGCTCATGGAATTAATGTTCGCTATATTGGAAAAGTGGCTGAGGGGACCAGACATTTACCTCATCTTTGGGATCTTTGCTCCAATGAGATAGTGGTTAGATCTGCTAAGCACATTCTCAAGGATGCCTTGAGAGAAACGAATGATCATGATATTGGGCCCGCAATCACCCATTTCTTCAACTGTTTCTTTGGAAGCTGTCAAGCCGTTGGCTCAAAAGTTGCTGCTAATAATATGCAGTCTAGAACGCCCAAAAGGGAACAAACAGGACAGCAATCTCCAAGAAAATCGTCTAAGGGACTAGGAAAATTGAAGGATGGAGTATCTGCTAGAAAGAGTCGATCCTCATTTATGCTTGCTAGCTCAGAAACTCTATGGTCCGACATTCAAGAATTTGCAAAACTCAAATATCAGTTTGAGCTGCCGGAGGATGCTAGGATGCGTGTAAAGAAAGATTCTGTTATACGTAATCTTTGCCAAAAGGTGGGCATTACAATTGCAGCTCGCAGATATGATCTTAATTCTGCAGCACCTTTCCAAATGTCAGATATCTTAAATCTTCAACCTGTAGTGAAACATTCAGTTCCTGTCTGTTCAGAAGCTAAGGATCTTGTGGAAACAGGAAAGATCCAACTGGCCGAGGGAATGTTAAGTGAAGCGTACACATTATTTACCGAGGCATTTTCAATACTTCAGCAGGTTACTGGTCCAATGCATAGGGAGGTTGCTAACTGCTGTCGGTATCTTGCCATGGTTCTGTATCATGCGGGAGACATGGCTGGAGCCATAATGCAACAGCATAAGGAACTAATTATAAATGAACGCTGCCTTGGCCTAGACCACCCTGACACTGCTCACAGCTATGGAAATATGGCTCTTTTCTACCATGGACTTAACCAGACAGAACTTGCACTATGGCACATGTCAAGGGCATTGCTTCTGCTAAGTTTGTCATCGGGCCCAGATCAACCTGATGTTGCTGCAACTTTCATTAATGTTGCTATGATGTACCAGATCGATCTTGGGAAGATGGACACTGCTCTTCGATATTTGCAAGAGGCTCTGAAAAAAAATGAAAGGCTTCTAGGGGAGGAGCACATCCAGACTGCTGTATGCTATCACGCACTTGCTATTGCATTTAATTGTATGGGTGCCTTCAAGCTCTCTCACCAGCATGAGAAGAAAACTTATGACATACTAGTCAAACAATTGGGCGAGGAGGATTCTAGAACACGTGACTCTCAAAACTGGATGAAGACATTTAAGATGCGCGAGCTACAGATGAATGCACAAAAGCAAAAAGGTCAAGCTTTGAATGCTGCTTCGGCTCAAAAGGCAATTGACATCTTGAAGGTCTGGCCCATCCTGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1164

Amino Acids

128.63

Weight (kDa)

5.77

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1368, 2933
AasI GACNNNNNNGTC 1 cut(s) 3317
AatII GACGTC 1 cut(s) 260
Acc36I ACCTGC 1 cut(s) 2806
AccB1I GGYRCC 2 cut(s) 1328, 3269
AccB7I CCANNNNNTGG 1 cut(s) 2602
AccBSI CCGCTC 1 cut(s) 682
AccII CGCG 1 cut(s) 3390
AciI CCGC 7 cut(s) 452, 682, 907, 1061, 1070, 2280, 2885
AclWI GGATC 8 cut(s) 1004, 1225, 1585, 1910, 2199, 2454, 2733, 2740
AcoI YGGCCR 2 cut(s) 1380, 2754
AcsI RAATTY 8 cut(s) 114, 672, 733, 872, 900, 1929, 2051, 2510
AcuI CTGAAG 5 cut(s) 918, 1036, 1803, 2130, 2795
AcvI CACGTG 1 cut(s) 3353
AcyI GRCGYC 1 cut(s) 257
AfaI GTAC 6 cut(s) 211, 1140, 1225, 1340, 2780, 3128
AfiI CCNNNNNNNGG 6 cut(s) 567, 1121, 1522, 2093, 2094, 2602
AflIII ACRYGT 5 cut(s) 38, 50, 1026, 3039, 3350
AgeI ACCGGT 1 cut(s) 1606
AhlI ACTAGT 1 cut(s) 3316
AjnI CCWGG 5 cut(s) 304, 331, 1341, 1699, 1749
AjuI GAANNNNNNNTTGG 2 cut(s) 2931, 2963
AleI CACNNNNGTG 1 cut(s) 771
AloI GAACNNNNNNTCC 2 cut(s) 2121, 2153
Alw21I GWGCWC 2 cut(s) 1563, 3216
Alw26I GTCTC 5 cut(s) 29, 272, 1262, 1360, 2883
AlwI GGATC 8 cut(s) 1004, 1225, 1585, 1910, 2199, 2454, 2733, 2740
AlwNI CAGNNNCTG 1 cut(s) 2705
AoxI GGCC 9 cut(s) 82, 1380, 1752, 1842, 2276, 2754, 2950, 3076, 3476
ApaI GGGCCC 2 cut(s) 2280, 3080
ApoI RAATTY 8 cut(s) 114, 672, 733, 872, 900, 1929, 2051, 2510
ArsI GACNNNNNNTTYG 2 cut(s) 1766, 1798
AseI ATTAAT 3 cut(s) 1733, 2133, 3111
AsiGI ACCGGT 1 cut(s) 1606
Asp700I GAANNNNTTC 3 cut(s) 711, 1929, 3198
AspLEI GCGC 3 cut(s) 31, 1545, 3390
AsuC2I CCSGG 1 cut(s) 1431
AsuHPI GGTGA 7 cut(s) 387, 1292, 1798, 1945, 2076, 2278, 3278
AsuNHI GCTAGC 1 cut(s) 2477
AvaII GGWCC 7 cut(s) 328, 1072, 1697, 1704, 2166, 2496, 2825
AxyI CCTNAGG 1 cut(s) 891
BaeGI GKGCMC 3 cut(s) 1130, 2280, 3080
BalI TGGCCA 1 cut(s) 1382
BanI GGYRCC 2 cut(s) 1328, 3269
BanII GRGCYC 5 cut(s) 199, 305, 919, 2280, 3080
BauI CACGAG 1 cut(s) 1677
BbrPI CACGTG 1 cut(s) 3353
BbsI GAAGAC 3 cut(s) 108, 1942, 3380
Bbv12I GWGCWC 2 cut(s) 1563, 3216
BbvCI CCTCAGC 1 cut(s) 2160
BccI CCATC 9 cut(s) 74, 154, 335, 1568, 1784, 1906, 2429, 3142, 3488
BceAI ACGGC 2 cut(s) 829, 2309
BcgI CGANNNNNNTGC 4 cut(s) 202, 234, 236, 268
BciT130I CCWGG 5 cut(s) 306, 333, 1343, 1701, 1751
BclI TGATCA 1 cut(s) 2263
BcnI CCSGG 1 cut(s) 1431
BcoDI GTCTC 5 cut(s) 29, 272, 1262, 1360, 2883
BcuI ACTAGT 1 cut(s) 3316
BfmI CTRYAG 5 cut(s) 460, 1761, 2643, 2685, 3395
BfoI RGCGCY 1 cut(s) 1546
BfuAI ACCTGC 1 cut(s) 2806
BglII AGATCT 2 cut(s) 185, 2219
BlpI GCTNAGC 3 cut(s) 1539, 1836, 2226
Bme1390I CCNGG 6 cut(s) 306, 333, 1343, 1431, 1701, 1751
Bme18I GGWCC 7 cut(s) 328, 1072, 1697, 1704, 2166, 2496, 2825
BmrFI CCNGG 6 cut(s) 306, 333, 1343, 1431, 1701, 1751
BmrI ACTGGG 1 cut(s) 540
BmtI GCTAGC 1 cut(s) 2481
BmuI ACTGGG 1 cut(s) 540
BoxI GACNNNNGTC 1 cut(s) 1702
BpiI GAAGAC 3 cut(s) 108, 1942, 3380
BplI GAGNNNNNCTC 2 cut(s) 1657, 1689
BpmI CTGGAG 2 cut(s) 327, 2919
Bpu10I CCTNAGC 3 cut(s) 585, 2160, 2721
Bpu1102I GCTNAGC 3 cut(s) 1539, 1836, 2226
BpuEI CTTGAG 4 cut(s) 1097, 1741, 2222, 2269
BpuMI CCSGG 1 cut(s) 1431
Bsa29I ATCGAT 3 cut(s) 1230, 1389, 3135
BsaAI YACGTR 2 cut(s) 2585, 3353
BsaHI GRCGYC 1 cut(s) 257
BsaWI WCCGGW 1 cut(s) 1606
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 6 cut(s) 567, 1121, 1522, 2093, 2094, 2602
Bse118I RCCGGY 1 cut(s) 1606
Bse1I ACTGG 8 cut(s) 535, 755, 1135, 1699, 2019, 2757, 2827, 3371
Bse21I CCTNAGG 1 cut(s) 891
Bse3DI GCAATG 1 cut(s) 3050
BseBI CCWGG 5 cut(s) 306, 333, 1343, 1701, 1751
BseCI ATCGAT 3 cut(s) 1230, 1389, 3135
BseLI CCNNNNNNNGG 6 cut(s) 567, 1121, 1522, 2093, 2094, 2602
BseMI GCAATG 1 cut(s) 3050
BseMII CTCAG 6 cut(s) 315, 905, 1143, 1430, 2151, 2496
BseNI ACTGG 8 cut(s) 535, 755, 1135, 1699, 2019, 2757, 2827, 3371
BseRI GAGGAG 8 cut(s) 866, 879, 1643, 1665, 1994, 1997, 3224, 3350
BseSI GKGCMC 3 cut(s) 1130, 2280, 3080
BsgI GTGCAG 4 cut(s) 678, 1587, 1675, 2053
Bsh1236I CGCG 1 cut(s) 3390
BshFI GGCC 9 cut(s) 84, 1382, 1754, 1844, 2278, 2756, 2952, 3078, 3478
BshNI GGYRCC 2 cut(s) 1328, 3269
BshTI ACCGGT 1 cut(s) 1606
BshVI ATCGAT 3 cut(s) 1230, 1389, 3135
BsiHKAI GWGCWC 2 cut(s) 1563, 3216
BsiSI CCGG 3 cut(s) 1430, 1607, 2543
BsiWI CGTACG 1 cut(s) 209
BslFI GGGAC 4 cut(s) 314, 547, 2179, 2430
BslI CCNNNNNNNGG 6 cut(s) 567, 1121, 1522, 2093, 2094, 2602
BsmAI GTCTC 5 cut(s) 29, 272, 1262, 1360, 2883
BsmBI CGTCTC 1 cut(s) 1262
BsmFI GGGAC 4 cut(s) 314, 547, 2179, 2430
BsmI GAATGC 5 cut(s) 1434, 1619, 1867, 3409, 3439
BsnI GGCC 9 cut(s) 84, 1382, 1754, 1844, 2278, 2756, 2952, 3078, 3478
Bsp120I GGGCCC 2 cut(s) 2276, 3076
Bsp1286I GDGCHC 8 cut(s) 199, 305, 919, 1130, 1563, 2280, 3080, 3216
Bsp1407I TGTACA 1 cut(s) 1138
Bsp1720I GCTNAGC 3 cut(s) 1539, 1836, 2226
Bsp19I CCATGG 3 cut(s) 2088, 2868, 3004
BspACI CCGC 7 cut(s) 452, 682, 907, 1061, 1070, 2280, 2885
BspANI GGCC 9 cut(s) 84, 1382, 1754, 1844, 2278, 2756, 2952, 3078, 3478
BspCNI CTCAG 6 cut(s) 316, 904, 1144, 1429, 2152, 2495
BspDI ATCGAT 3 cut(s) 1230, 1389, 3135
BspFNI CGCG 1 cut(s) 3390
BspHI TCATGA 1 cut(s) 2266
BspMAI CTGCAG 2 cut(s) 1765, 2647
BspMI ACCTGC 1 cut(s) 2806
BspOI GCTAGC 1 cut(s) 2481
BspPI GGATC 8 cut(s) 1004, 1225, 1585, 1910, 2199, 2454, 2733, 2740
BspQI GCTCTTC 1 cut(s) 3165
BspT107I GGYRCC 2 cut(s) 1328, 3269
BsrBI CCGCTC 1 cut(s) 682
BsrDI GCAATG 1 cut(s) 3050
BsrFI RCCGGY 1 cut(s) 1606
BsrGI TGTACA 1 cut(s) 1138
BsrI ACTGG 8 cut(s) 535, 755, 1135, 1699, 2019, 2757, 2827, 3371
BssAI RCCGGY 1 cut(s) 1606
BssNI GRCGYC 1 cut(s) 257
BssSI CACGAG 1 cut(s) 1677
BssT1I CCWWGG 7 cut(s) 153, 1332, 1521, 2088, 2868, 2947, 3004
Bst2BI CACGAG 1 cut(s) 1677
Bst2UI CCWGG 5 cut(s) 306, 333, 1343, 1701, 1751
Bst4CI ACNGT 7 cut(s) 139, 273, 316, 524, 1145, 1567, 2303
Bst6I CTCTTC 3 cut(s) 1467, 1503, 3165
BstACI GRCGYC 1 cut(s) 257
BstAPI GCANNNNNTGC 2 cut(s) 794, 2120
BstAUI TGTACA 1 cut(s) 1138
BstBAI YACGTR 2 cut(s) 2585, 3353
BstDSI CCRYGG 3 cut(s) 2088, 2868, 3004
BstFNI CGCG 1 cut(s) 3390
BstH2I RGCGCY 1 cut(s) 1546
BstHHI GCGC 3 cut(s) 31, 1545, 3390
BstMAI GTCTC 5 cut(s) 29, 272, 1262, 1360, 2883
BstNI CCWGG 5 cut(s) 306, 333, 1343, 1701, 1751
BstNSI RCATGY 6 cut(s) 42, 54, 835, 1030, 1100, 3043
BstPAI GACNNNNGTC 1 cut(s) 1702
BstSCI CCNGG 6 cut(s) 304, 331, 1341, 1429, 1699, 1749
BstSFI CTRYAG 5 cut(s) 460, 1761, 2643, 2685, 3395
BstSLI GKGCMC 3 cut(s) 1130, 2280, 3080
BstSNI TACGTA 1 cut(s) 2585
BstUI CGCG 1 cut(s) 3390
BstV2I GAAGAC 3 cut(s) 108, 1942, 3380
BstX2I RGATCY 6 cut(s) 185, 1577, 2191, 2219, 2725, 2745
BstXI CCANNNNNNTGG 3 cut(s) 738, 1528, 2126
BstYI RGATCY 6 cut(s) 185, 1577, 2191, 2219, 2725, 2745
Bsu15I ATCGAT 3 cut(s) 1230, 1389, 3135
Bsu36I CCTNAGG 1 cut(s) 891
BsuRI GGCC 9 cut(s) 84, 1382, 1754, 1844, 2278, 2756, 2952, 3078, 3478
BsuTUI ATCGAT 3 cut(s) 1230, 1389, 3135
BtgI CCRYGG 3 cut(s) 2088, 2868, 3004
BtsI GCAGTG 3 cut(s) 823, 2967, 3153
BtsIMutI CAGTG 9 cut(s) 520, 823, 1128, 1692, 1809, 1827, 1902, 2967, 3153
BveI ACCTGC 1 cut(s) 2806
CaiI CAGNNNCTG 1 cut(s) 2705
CciI TCATGA 1 cut(s) 2266
CfoI GCGC 3 cut(s) 31, 1545, 3390
Cfr10I RCCGGY 1 cut(s) 1606
ClaI ATCGAT 3 cut(s) 1230, 1389, 3135
CseI GACGC 4 cut(s) 1089, 1279, 1880, 2110
Csp6I GTAC 6 cut(s) 210, 1139, 1224, 1339, 2779, 3127
CspAI ACCGGT 1 cut(s) 1606
CspCI CAANNNNNGTGG 2 cut(s) 604, 639
CviQI GTAC 6 cut(s) 210, 1139, 1224, 1339, 2779, 3127
DrdI GACNNNNNNGTC 1 cut(s) 3317
DseDI GACNNNNNNGTC 1 cut(s) 3317
EaeI YGGCCR 2 cut(s) 1380, 2754
Eam1104I CTCTTC 3 cut(s) 1467, 1503, 3165
EarI CTCTTC 3 cut(s) 1467, 1503, 3165
EciI GGCGGA 1 cut(s) 441
Eco105I TACGTA 1 cut(s) 2585
Eco130I CCWWGG 7 cut(s) 153, 1332, 1521, 2088, 2868, 2947, 3004
Eco24I GRGCYC 5 cut(s) 199, 305, 919, 2280, 3080
Eco32I GATATC 1 cut(s) 2668
Eco47I GGWCC 7 cut(s) 328, 1072, 1697, 1704, 2166, 2496, 2825
Eco57I CTGAAG 5 cut(s) 918, 1036, 1803, 2130, 2795
Eco72I CACGTG 1 cut(s) 3353
Eco81I CCTNAGG 1 cut(s) 891
EcoO109I RGGNCCY 1 cut(s) 328
EcoRII CCWGG 5 cut(s) 304, 331, 1341, 1699, 1749
EcoRV GATATC 1 cut(s) 2668
EcoT14I CCWWGG 7 cut(s) 153, 1332, 1521, 2088, 2868, 2947, 3004
EcoT22I ATGCAT 3 cut(s) 247, 989, 2835
EcoT38I GRGCYC 5 cut(s) 199, 305, 919, 2280, 3080
ErhI CCWWGG 7 cut(s) 153, 1332, 1521, 2088, 2868, 2947, 3004
Esp3I CGTCTC 1 cut(s) 1262
FalI AAGNNNNNCTT 4 cut(s) 1917, 1949, 2231, 2263
FaqI GGGAC 4 cut(s) 314, 547, 2179, 2430
FauI CCCGC 3 cut(s) 900, 2287, 2878
FbaI TGATCA 1 cut(s) 2263
FriOI GRGCYC 5 cut(s) 199, 305, 919, 2280, 3080
GlaI GCGC 3 cut(s) 30, 1544, 3389
GsuI CTGGAG 2 cut(s) 327, 2919
HaeII RGCGCY 1 cut(s) 1546
HaeIII GGCC 9 cut(s) 84, 1382, 1754, 1844, 2278, 2756, 2952, 3078, 3478
HapII CCGG 3 cut(s) 1430, 1607, 2543
HgaI GACGC 4 cut(s) 1089, 1279, 1880, 2110
HhaI GCGC 3 cut(s) 31, 1545, 3390
Hin1I GRCGYC 1 cut(s) 257
Hin6I GCGC 3 cut(s) 29, 1543, 3388
HinP1I GCGC 3 cut(s) 29, 1543, 3388
HindIII AAGCTT 2 cut(s) 660, 3426
HpaII CCGG 3 cut(s) 1430, 1607, 2543
HphI GGTGA 7 cut(s) 387, 1292, 1798, 1945, 2076, 2278, 3278
Hpy166II GTNNAC 3 cut(s) 1036, 1141, 2781
Hpy8I GTNNAC 3 cut(s) 1036, 1141, 2781
Hpy99I CGWCG 1 cut(s) 259
HpyCH4III ACNGT 7 cut(s) 139, 273, 316, 524, 1145, 1567, 2303
HpyCH4IV ACGT 3 cut(s) 257, 2584, 3352
HpySE526I ACGT 3 cut(s) 257, 2584, 3352
Hsp92I GRCGYC 1 cut(s) 257
HspAI GCGC 3 cut(s) 29, 1543, 3388
Ksp22I TGATCA 1 cut(s) 2263
LguI GCTCTTC 1 cut(s) 3165
LmnI GCTCC 5 cut(s) 155, 679, 2204, 2900, 3211
MaeII ACGT 3 cut(s) 257, 2584, 3352
MaeIII GTNAC 7 cut(s) 258, 499, 928, 1669, 1804, 2818, 3353
MbiI CCGCTC 1 cut(s) 682
MfeI CAATTG 4 cut(s) 1274, 2613, 3326, 3456
MflI RGATCY 6 cut(s) 185, 1577, 2191, 2219, 2725, 2745
MhlI GDGCHC 8 cut(s) 199, 305, 919, 1130, 1563, 2280, 3080, 3216
MlsI TGGCCA 1 cut(s) 1382
MluNI TGGCCA 1 cut(s) 1382
MlyI GAGTC 4 cut(s) 1451, 1666, 2464, 3350
MmeI TCCRAC 3 cut(s) 604, 2523, 2773
Mox20I TGGCCA 1 cut(s) 1382
Mph1103I ATGCAT 3 cut(s) 247, 989, 2835
MroXI GAANNNNTTC 3 cut(s) 711, 1929, 3198
MscI TGGCCA 1 cut(s) 1382
MslI CAYNNNNRTG 5 cut(s) 771, 1029, 2124, 2979, 3291
Msp20I TGGCCA 1 cut(s) 1382
MspA1I CMGCKG 1 cut(s) 1084
MspI CCGG 3 cut(s) 1430, 1607, 2543
MspR9I CCNGG 6 cut(s) 306, 333, 1343, 1431, 1701, 1751
MunI CAATTG 4 cut(s) 1274, 2613, 3326, 3456
Mva1269I GAATGC 5 cut(s) 1434, 1619, 1867, 3409, 3439
MvaI CCWGG 5 cut(s) 306, 333, 1343, 1701, 1751
MvnI CGCG 1 cut(s) 3390
NciI CCSGG 1 cut(s) 1431
NcoI CCATGG 3 cut(s) 2088, 2868, 3004
NheI GCTAGC 1 cut(s) 2477
NmeAIII GCCGAG 2 cut(s) 1291, 2782
NmuCI GTSAC 5 cut(s) 258, 928, 1669, 1804, 3353
NsiI ATGCAT 3 cut(s) 247, 989, 2835
NspI RCATGY 6 cut(s) 42, 54, 835, 1030, 1100, 3043
OliI CACNNNNGTG 1 cut(s) 771
PaeI GCATGC 1 cut(s) 835
PagI TCATGA 1 cut(s) 2266
PasI CCCWGGG 1 cut(s) 332
PciI ACATGT 4 cut(s) 38, 50, 1026, 3039
PciSI GCTCTTC 1 cut(s) 3165
PctI GAATGC 5 cut(s) 1434, 1619, 1867, 3409, 3439
PdmI GAANNNNTTC 3 cut(s) 711, 1929, 3198
PfeI GAWTC 6 cut(s) 1106, 1244, 1682, 1814, 2573, 3341
Pfl23II CGTACG 1 cut(s) 209
PflMI CCANNNNNTGG 1 cut(s) 2602
PinAI ACCGGT 1 cut(s) 1606
PleI GAGTC 4 cut(s) 1451, 1666, 2463, 3350
PmaCI CACGTG 1 cut(s) 3353
PmlI CACGTG 1 cut(s) 3353
PpsI GAGTC 4 cut(s) 1451, 1666, 2463, 3350
Ppu21I YACGTR 2 cut(s) 2585, 3353
PpuMI RGGWCCY 1 cut(s) 328
PscI ACATGT 4 cut(s) 38, 50, 1026, 3039
PshAI GACNNNNGTC 1 cut(s) 1702
PshBI ATTAAT 3 cut(s) 1733, 2133, 3111
PsiI TTATAA 2 cut(s) 1368, 2933
Psp5II RGGWCCY 1 cut(s) 328
Psp6I CCWGG 5 cut(s) 304, 331, 1341, 1699, 1749
PspCI CACGTG 1 cut(s) 3353
PspGI CCWGG 5 cut(s) 304, 331, 1341, 1699, 1749
PspLI CGTACG 1 cut(s) 209
PspOMI GGGCCC 2 cut(s) 2276, 3076
PspPPI RGGWCCY 1 cut(s) 328
PstI CTGCAG 2 cut(s) 1765, 2647
PstNI CAGNNNCTG 1 cut(s) 2705
PsuI RGATCY 6 cut(s) 185, 1577, 2191, 2219, 2725, 2745
PvuII CAGCTG 1 cut(s) 1084
RsaI GTAC 6 cut(s) 211, 1140, 1225, 1340, 2780, 3128
RsaNI GTAC 6 cut(s) 210, 1139, 1224, 1339, 2779, 3127
RseI CAYNNNNRTG 5 cut(s) 771, 1029, 2124, 2979, 3291
SapI GCTCTTC 1 cut(s) 3165
SchI GAGTC 4 cut(s) 1451, 1666, 2464, 3350
ScrFI CCNGG 6 cut(s) 306, 333, 1343, 1431, 1701, 1751
SduI GDGCHC 8 cut(s) 199, 305, 919, 1130, 1563, 2280, 3080, 3216
SfcI CTRYAG 5 cut(s) 460, 1761, 2643, 2685, 3395
SgrAI CRCCGGYG 1 cut(s) 1606
SinI GGWCC 7 cut(s) 328, 1072, 1697, 1704, 2166, 2496, 2825
SmiMI CAYNNNNRTG 5 cut(s) 771, 1029, 2124, 2979, 3291
SmlI CTYRAG 4 cut(s) 1076, 1720, 2237, 2248
SmoI CTYRAG 4 cut(s) 1076, 1720, 2237, 2248
SnaBI TACGTA 1 cut(s) 2585
SpeI ACTAGT 1 cut(s) 3316
SphI GCATGC 1 cut(s) 835
SsiI CCGC 7 cut(s) 452, 682, 907, 1061, 1070, 2280, 2885
StyD4I CCNGG 6 cut(s) 304, 331, 1341, 1429, 1699, 1749
StyI CCWWGG 7 cut(s) 153, 1332, 1521, 2088, 2868, 2947, 3004
TaaI ACNGT 7 cut(s) 139, 273, 316, 524, 1145, 1567, 2303
TaiI ACGT 3 cut(s) 260, 2587, 3355
TaqI TCGA 7 cut(s) 254, 1230, 1389, 1656, 2458, 3135, 3163
TatI WGTACW 2 cut(s) 1138, 1223
TfiI GAWTC 6 cut(s) 1106, 1244, 1682, 1814, 2573, 3341
TscAI CASTG 9 cut(s) 527, 823, 1135, 1699, 1816, 1834, 1909, 2974, 3160
TseFI GTSAC 5 cut(s) 258, 928, 1669, 1804, 3353
Tsp45I GTSAC 5 cut(s) 258, 928, 1669, 1804, 3353
TspGWI ACGGA 1 cut(s) 1865
TspRI CASTG 9 cut(s) 527, 823, 1135, 1699, 1816, 1834, 1909, 2974, 3160
Van91I CCANNNNNTGG 1 cut(s) 2602
VpaK11BI GGWCC 7 cut(s) 328, 1072, 1697, 1704, 2166, 2496, 2825
VspI ATTAAT 3 cut(s) 1733, 2133, 3111
XapI RAATTY 8 cut(s) 114, 672, 733, 872, 900, 1929, 2051, 2510
XbaI TCTAGA 2 cut(s) 2360, 3344
XceI RCATGY 6 cut(s) 42, 54, 835, 1030, 1100, 3043
XcmI CCANNNNNNNNNTGG 4 cut(s) 94, 735, 2209, 3137
XmnI GAANNNNTTC 3 cut(s) 711, 1929, 3198
ZraI GACGTC 1 cut(s) 258
Zsp2I ATGCAT 3 cut(s) 247, 989, 2835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.