Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006144.1

Orthogroup ID

OG0005851

Physical Location & Seq

Genomic Coordinates Reverse (-)

22992 .. 31690

Gene Structure 8699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006144.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2835 bp

ctgttgcagagtgttttgccaggcattcttcaaggggataaatcagactctcttttatatggttctgttgataatgggaaaaagatatgctggaatgaggattttcattccaaggtggtggaggctgctaaacgccttcatttgaaagaacacacagtccttgatggatctggaaatgttttcaaattagctgcaccagtcgaatgcaagggtattgttggtagtgatgacaggcattatcttcttgacttgatgagagtaactcctcgtgatgcaaacttcactggatctgggtctcgattttgtatcttgagaccagaactaattacttcctattgccaggtccttgatgcagagaaatcaaaatcgaagtctaaatgtgaaggagaggctcaggtcaccgctgatgggccaaacgataaccaggacatcgcacaaaaagagaagaccgttgatgcacaagaaattgtctcaccaccagctgaaagctctgaatcacatgaggaaactcttttcaaccctaatgtcttcactgagtttaagttggctggaaatgcggaggagatagcaacagatgaagaaaatgtgaggaaagccagtttgtatcttactgaggttgttcttccgaagttcatacaagatctttgcacacttgaagtatcacccatggatgggcagacactaactgaagcactccatgctcatggaattaatgttcgttatattggaaaagtggctgatgggaccaggcatttacctcatctttgggatctttgttctaatgagattgtggttagatcagccaagcacattcttaaggatgtcttaagagatacagaggatcatgatattgggcctgcaatctgccatttcttcaactgttttttcggaagctatcaagctgttggctcaaaagtcgctgctaatagttctcagtctagaacccccaaaaaagaacaagcaggtcatcaatctccgggaaaacggtcaaagggacaaggaagatggaaggctggagcttctacaaggaagagtgtatcttcatatatgcatgttagctcagagactctatggtctgacattcaagaatttgccaaactcaaatatgagtttgagttgccaaaggatgctaggatgcatgtaaagaaagattcggttatccgtaatctttgccaaaaggtgggcattacaattgcagctcgcagatatgatctgaaatctgcagcaccttttgaaatatcagatatcttgaatcttcaacctgtagtgaaacactctgttcctgtttgttcagaagctaaggatcttgtggaaacagggaaaatccaattggctgagggaatgttgagtgaagcctacacattattttccgaggcgttttccatacttcagcaggttacaggcccaatgcatcgggaggttgctaactgctgtcggtatcttgcaatggttctatatcatgctggagacatggcgggagccataatgcaacagcacaaggagctaattataaacgagcgttgcctgggtttggaccaccctgacactgctcacagctatgggaatatggctcttttctatcatggacttaaccaaacagaactcgccttacgacatatgtcccgggcattgctcctgttaagtttgtcatctggcccagatcatcctgatgttgcagcaacattcattaatgttgctatgatgtaccaggatcttgggaagatggacactgctcttcgatatttgcaagaggctttgaaaaagaatgaaaggcttctgggcgaggaacatatccaaactgctgtatgctatcatgcacttgctattgcatttaattgtatgggtgccttcaagctctcccaccagcatgagaagaaaacttatgatatacttgtcaaacaactgggtgaggaggattcgaggacacgtgactctcaaaactggatgaagacatttaagttgcgcgagcaacagatgaatgcacaaaagcaaaaaggtcaagctttgaatgccgcttcagctcaaaaggcaatcgacatgttaaaggccaatcctgacttgatgcaggcattccaatctgctgctatagccggcgggtctgggagttccaacacttctgtcaacaaatctcttaatgctgccgcaataatgggtgaaactcttccccgagggaggggagtagatgagagggctaaacgagcagcagccgaaatcaggaagaaggcagcagcgagaggcctcttaatacgtcaacacggtgttccggtccaagctctgcctccactgactcatctcctcaatatcatgagtgcagcaggtggggccccagattcagtggaaaatggagaaaccaatggagcgaaggaaggcaacaaccatccttcaaatggcccagcagatgagaaaactaaccaaccatcattagagccggaaggtcaacctccagttgggttgggcagaggcttagctgcacttgatggcaagaaacaaaagtcgaaagccaaagctgcatcattgaaggttgatgacgtgaaggccatgacgttcaagacagtaaaggacgcagagaagttctattctgcctattccttagcacttggctttggatttaggaaggataccaagggagaggctgaaggggggggatatgagatagtgagatttaccatgaaggacctgtacaacaagctagaccaacaacgacgcaccacttcctttgagagtgactctaaaggcgcacttgcctacatgaacgctctggcagcacaagacccatacttctactgtaggttcaatgtagatgtagaaaacaggttagcaaacatgttgtggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CLU CLU_N DUF727 TPR_10 TPR_12 eIF3_p135

Protein Analysis

944

Amino Acids

103.9

Weight (kDa)

7.23

Isoelectric Point (pI)

40.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52140 AT3G52140 AT3G52140 AT3G52140
fragaria_vesca	FvH4_4g12380
malus_domestica	MD02G1316400.v1.1 MD07G1005500.v1.1
prunus_persica	Prupe.2G007800_v2.0.a1 Prupe.2G007800_v2.0.a1
pyrus_communis	pycom02g26500 pycom02g26510 pycom07g00460
rosa_chinensis	RchiOBHm_Chr4g0410621
rosa_laevigata	RLG00000008410
rosa_multiflora	Rmu_co8298143.1_g000001 Rmu_sc0005100.1_g000010 Rmu_sc0006144.1_g000007 Rmu_sc0006144.1_g000008
rosa_roxburghii	Rroxscaffold_5G00355410
rosa_rugosa	Rorug04G0113200 Rorug04G0113200 Rorug04G0113300 Rorug04G0113400
rosa_samantha	Rh4AG161800 Rh4BG160800 Rh4CG174800 Rh4DG157100
rosa_wichuraiana	Rw4G013500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1511
AarI	CACCTGC	1 cut(s)	2306
AasI	GACNNNNNNGTC	1 cut(s)	1072
Acc36I	ACCTGC	3 cut(s)	953, 1384, 2306
AccB1I	GGYRCC	1 cut(s)	1844
AccB7I	CCANNNNNTGG	1 cut(s)	1180
AccII	CGCG	1 cut(s)	1965
AciI	CCGC	6 cut(s)	402, 557, 1475, 2013, 2094, 2142
AclWI	GGATC	6 cut(s)	175, 295, 777, 849, 1311, 1719
AcsI	RAATTY	1 cut(s)	1088
AcuI	CTGAAG	4 cut(s)	708, 1373, 2001, 2655
AcvI	CACGTG	1 cut(s)	1928
AfaI	GTAC	2 cut(s)	1706, 2681
AflII	CTTAAG	2 cut(s)	815, 826
AflIII	ACRYGT	3 cut(s)	1925, 2037, 2823
AjiI	CACGTC	1 cut(s)	2530
AjnI	CCWGG	6 cut(s)	19, 339, 423, 746, 1524, 1707
AjuI	GAANNNNNNNTTGG	2 cut(s)	1313, 1345
AloI	GAACNNNNNNTCC	4 cut(s)	141, 173, 699, 731
Alw26I	GTCTC	5 cut(s)	300, 307, 475, 1058, 1461
AlwI	GGATC	6 cut(s)	175, 295, 777, 849, 1311, 1719
Ama87I	CYCGRG	2 cut(s)	1623, 2166
AoxI	GGCC	9 cut(s)	410, 854, 1402, 1654, 2046, 2236, 2322, 2389, 2535
ApaI	GGGCCC	1 cut(s)	2326
ApoI	RAATTY	1 cut(s)	1088
ArsI	GACNNNNNNTTYG	2 cut(s)	356, 388
AseI	ATTAAT	2 cut(s)	711, 1689
Asp700I	GAANNNNTTC	2 cut(s)	1773, 2160
AspLEI	GCGC	2 cut(s)	1965, 2738
AsuC2I	CCSGG	3 cut(s)	978, 1624, 1625
AsuHPI	GGTGA	5 cut(s)	391, 465, 654, 1919, 2165
AvaI	CYCGRG	2 cut(s)	1623, 2166
AvaII	GGWCC	5 cut(s)	343, 744, 1534, 2266, 2674
BaeGI	GKGCMC	1 cut(s)	2326
BanI	GGYRCC	1 cut(s)	1844
BanII	GRGCYC	1 cut(s)	2326
BarI	GAAGNNNNNNTAC	2 cut(s)	2663, 2695
BauI	CACGAG	1 cut(s)	267
BbrPI	CACGTG	1 cut(s)	1928
BbsI	GAAGAC	3 cut(s)	452, 520, 1955
BbvCI	CCTCAGC	1 cut(s)	1335
BccI	CCATC	9 cut(s)	158, 401, 665, 734, 999, 1717, 2385, 2425, 2471
BciT130I	CCWGG	6 cut(s)	21, 341, 425, 748, 1526, 1709
BciVI	GTATCC	1 cut(s)	2611
BcnI	CCSGG	3 cut(s)	978, 1624, 1625
BcoDI	GTCTC	5 cut(s)	300, 307, 475, 1058, 1461
BfaI	CTAG	3 cut(s)	939, 1131, 2690
BfmI	CTRYAG	4 cut(s)	1221, 1263, 2085, 2785
BfrI	CTTAAG	2 cut(s)	815, 826
BfuAI	ACCTGC	3 cut(s)	953, 1384, 2306
BfuI	GTATCC	1 cut(s)	2611
BglII	AGATCT	1 cut(s)	640
BlpI	GCTNAGC	1 cut(s)	2464
Bme1390I	CCNGG	9 cut(s)	21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
Bme18I	GGWCC	5 cut(s)	343, 744, 1534, 2266, 2674
BmeT110I	CYCGRG	2 cut(s)	1623, 2166
BmgBI	CACGTC	1 cut(s)	2530
BmiI	GGNNCC	6 cut(s)	745, 1480, 1846, 2323, 2324, 2325
BmrFI	CCNGG	9 cut(s)	21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
BmrI	ACTGGG	1 cut(s)	1913
BmsI	GCATC	8 cut(s)	262, 340, 445, 1117, 1125, 1420, 2052, 2519
BmuI	ACTGGG	1 cut(s)	1913
BoxI	GACNNNNGTC	1 cut(s)	1618
BpiI	GAAGAC	3 cut(s)	452, 520, 1955
BplI	GAGNNNNNCTC	4 cut(s)	247, 279, 2711, 2743
BpmI	CTGGAG	3 cut(s)	1035, 1485, 2427
Bpu10I	CCTNAGC	4 cut(s)	393, 1299, 1335, 2590
Bpu1102I	GCTNAGC	1 cut(s)	2464
BpuEI	CTTGAG	1 cut(s)	331
BpuMI	CCSGG	3 cut(s)	978, 1624, 1625
BsaAI	YACGTR	1 cut(s)	1928
BsaI	GGTCTC	2 cut(s)	300, 307
BsaJI	CCNNGG	7 cut(s)	111, 666, 1371, 1525, 1623, 2167, 2622
BsaWI	WCCGGW	1 cut(s)	2263
Bse118I	RCCGGY	1 cut(s)	2090
Bse1I	ACTGG	6 cut(s)	197, 289, 597, 1908, 1946, 2444
Bse3DI	GCAATG	2 cut(s)	1452, 1628
BseBI	CCWGG	6 cut(s)	21, 341, 425, 748, 1526, 1709
BseDI	CCNNGG	7 cut(s)	111, 666, 1371, 1525, 1623, 2167, 2622
BseGI	GGATG	7 cut(s)	676, 826, 1132, 1140, 1663, 1950, 2377
BseMI	GCAATG	2 cut(s)	1452, 1628
BseMII	CTCAG	6 cut(s)	407, 525, 603, 947, 1074, 1326
BseNI	ACTGG	6 cut(s)	197, 289, 597, 1908, 1946, 2444
BseRI	GAGGAG	4 cut(s)	255, 575, 1925, 2285
BseSI	GKGCMC	1 cut(s)	2326
BseYI	CCCAGC	1 cut(s)	2392
BsgI	GTGCAG	3 cut(s)	177, 2331, 2454
Bsh1236I	CGCG	1 cut(s)	1965
BshFI	GGCC	9 cut(s)	412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
BshNI	GGYRCC	1 cut(s)	1844
BsiHKCI	CYCGRG	2 cut(s)	1623, 2166
BsiSI	CCGG	5 cut(s)	977, 1624, 2091, 2264, 2429
BslFI	GGGAC	3 cut(s)	757, 1008, 1606
BsmAI	GTCTC	5 cut(s)	300, 307, 475, 1058, 1461
BsmFI	GGGAC	3 cut(s)	757, 1008, 1606
BsmI	GAATGC	5 cut(s)	24, 209, 1984, 2014, 2069
BsnI	GGCC	9 cut(s)	412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
Bso31I	GGTCTC	2 cut(s)	300, 307
BsoBI	CYCGRG	2 cut(s)	1623, 2166
Bsp120I	GGGCCC	1 cut(s)	2322
Bsp1286I	GDGCHC	1 cut(s)	2326
Bsp1407I	TGTACA	1 cut(s)	2679
Bsp1720I	GCTNAGC	1 cut(s)	2464
Bsp19I	CCATGG	1 cut(s)	666
BspACI	CCGC	6 cut(s)	402, 557, 1475, 2013, 2094, 2142
BspANI	GGCC	9 cut(s)	412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
BspCNI	CTCAG	6 cut(s)	406, 526, 604, 946, 1073, 1327
BspFNI	CGCG	1 cut(s)	1965
BspHI	TCATGA	2 cut(s)	844, 2304
BspLI	GGNNCC	6 cut(s)	745, 1480, 1846, 2323, 2324, 2325
BspMAI	CTGCAG	1 cut(s)	1225
BspMI	ACCTGC	3 cut(s)	953, 1384, 2306
BspPI	GGATC	6 cut(s)	175, 295, 777, 849, 1311, 1719
BspQI	GCTCTTC	1 cut(s)	1740
BspT107I	GGYRCC	1 cut(s)	1844
BspTI	CTTAAG	2 cut(s)	815, 826
BspTNI	GGTCTC	2 cut(s)	300, 307
BsrDI	GCAATG	2 cut(s)	1452, 1628
BsrFI	RCCGGY	1 cut(s)	2090
BsrGI	TGTACA	1 cut(s)	2679
BsrI	ACTGG	6 cut(s)	197, 289, 597, 1908, 1946, 2444
BssAI	RCCGGY	1 cut(s)	2090
BssECI	CCNNGG	7 cut(s)	111, 666, 1371, 1525, 1623, 2167, 2622
BssSI	CACGAG	1 cut(s)	267
BssT1I	CCWWGG	3 cut(s)	111, 666, 2622
Bst2BI	CACGAG	1 cut(s)	267
Bst2UI	CCWGG	6 cut(s)	21, 341, 425, 748, 1526, 1709
Bst4CI	ACNGT	7 cut(s)	157, 451, 881, 987, 2258, 2554, 2786
Bst6I	CTCTTC	3 cut(s)	1025, 1740, 2166
BstAFI	CTTAAG	2 cut(s)	815, 826
BstAPI	GCANNNNNTGC	1 cut(s)	698
BstAUI	TGTACA	1 cut(s)	2679
BstBAI	YACGTR	1 cut(s)	1928
BstC8I	GCNNGC	5 cut(s)	858, 1201, 1967, 2067, 2092
BstDEI	CTNAG	9 cut(s)	393, 534, 612, 933, 1060, 1299, 1335, 2464, 2590
BstDSI	CCRYGG	1 cut(s)	666
BstEII	GGTNACC	1 cut(s)	397
BstF5I	GGATG	7 cut(s)	676, 826, 1132, 1140, 1663, 1950, 2377
BstFNI	CGCG	1 cut(s)	1965
BstHHI	GCGC	2 cut(s)	1965, 2738
BstMAI	GTCTC	5 cut(s)	300, 307, 475, 1058, 1461
BstNI	CCWGG	6 cut(s)	21, 341, 425, 748, 1526, 1709
BstNSI	RCATGY	4 cut(s)	1055, 1142, 2041, 2827
BstPAI	GACNNNNGTC	1 cut(s)	1618
BstPI	GGTNACC	1 cut(s)	397
BstSCI	CCNGG	9 cut(s)	19, 339, 423, 746, 976, 1524, 1622, 1623, 1707
BstSFI	CTRYAG	4 cut(s)	1221, 1263, 2085, 2785
BstSLI	GKGCMC	1 cut(s)	2326
BstUI	CGCG	1 cut(s)	1965
BstV2I	GAAGAC	3 cut(s)	452, 520, 1955
BstX2I	RGATCY	6 cut(s)	167, 287, 640, 769, 1303, 1711
BstXI	CCANNNNNNTGG	3 cut(s)	118, 704, 1715
BstYI	RGATCY	6 cut(s)	167, 287, 640, 769, 1303, 1711
BsuI	GTATCC	1 cut(s)	2611
BsuRI	GGCC	9 cut(s)	412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
BtgI	CCRYGG	1 cut(s)	666
BtgZI	GCGATG	1 cut(s)	415
BtrI	CACGTC	1 cut(s)	2530
BtsCI	GGATG	7 cut(s)	676, 826, 1132, 1140, 1663, 1950, 2377
BtsI	GCAGTG	2 cut(s)	1545, 1728
BtsIMutI	CAGTG	6 cut(s)	282, 531, 1545, 1728, 2282, 2340
BveI	ACCTGC	3 cut(s)	953, 1384, 2306
Cac8I	GCNNGC	5 cut(s)	858, 1201, 1967, 2067, 2092
CciI	TCATGA	2 cut(s)	844, 2304
CfoI	GCGC	2 cut(s)	1965, 2738
Cfr10I	RCCGGY	1 cut(s)	2090
Cfr9I	CCCGGG	1 cut(s)	1623
CseI	GACGC	2 cut(s)	2570, 2712
Csp6I	GTAC	2 cut(s)	1705, 2680
CspCI	CAANNNNNGTGG	2 cut(s)	2698, 2733
CviQI	GTAC	2 cut(s)	1705, 2680
DdeI	CTNAG	9 cut(s)	393, 534, 612, 933, 1060, 1299, 1335, 2464, 2590
DrdI	GACNNNNNNGTC	1 cut(s)	1072
DseDI	GACNNNNNNGTC	1 cut(s)	1072
Eam1104I	CTCTTC	3 cut(s)	1025, 1740, 2166
EarI	CTCTTC	3 cut(s)	1025, 1740, 2166
Eco130I	CCWWGG	3 cut(s)	111, 666, 2622
Eco147I	AGGCCT	1 cut(s)	2238
Eco24I	GRGCYC	1 cut(s)	2326
Eco31I	GGTCTC	2 cut(s)	300, 307
Eco32I	GATATC	1 cut(s)	1246
Eco47I	GGWCC	5 cut(s)	343, 744, 1534, 2266, 2674
Eco57I	CTGAAG	4 cut(s)	708, 1373, 2001, 2655
Eco72I	CACGTG	1 cut(s)	1928
Eco88I	CYCGRG	2 cut(s)	1623, 2166
Eco91I	GGTNACC	1 cut(s)	397
EcoO109I	RGGNCCY	4 cut(s)	343, 2322, 2323, 2674
EcoO65I	GGTNACC	1 cut(s)	397
EcoRII	CCWGG	6 cut(s)	19, 339, 423, 746, 1524, 1707
EcoRV	GATATC	1 cut(s)	1246
EcoT14I	CCWWGG	3 cut(s)	111, 666, 2622
EcoT22I	ATGCAT	3 cut(s)	1053, 1140, 1413
EcoT38I	GRGCYC	1 cut(s)	2326
ErhI	CCWWGG	3 cut(s)	111, 666, 2622
FalI	AAGNNNNNCTT	4 cut(s)	809, 841, 2724, 2756
FaqI	GGGAC	3 cut(s)	757, 1008, 1606
FauI	CCCGC	2 cut(s)	1468, 2087
FauNDI	CATATG	1 cut(s)	1617
FokI	GGATG	7 cut(s)	683, 833, 1139, 1147, 1650, 1957, 2364
FriOI	GRGCYC	1 cut(s)	2326
FspBI	CTAG	3 cut(s)	939, 1131, 2690
GlaI	GCGC	2 cut(s)	1964, 2737
GsaI	CCCAGC	1 cut(s)	2396
GsuI	CTGGAG	3 cut(s)	1035, 1485, 2427
HaeIII	GGCC	9 cut(s)	412, 856, 1404, 1656, 2048, 2238, 2324, 2391, 2537
HapII	CCGG	5 cut(s)	977, 1624, 2091, 2264, 2429
HgaI	GACGC	2 cut(s)	2570, 2712
HhaI	GCGC	2 cut(s)	1965, 2738
Hin6I	GCGC	2 cut(s)	1963, 2736
HinP1I	GCGC	2 cut(s)	1963, 2736
HincII	GTYRAC	3 cut(s)	2122, 2252, 2438
HindII	GTYRAC	3 cut(s)	2122, 2252, 2438
HindIII	AAGCTT	1 cut(s)	2001
HpaII	CCGG	5 cut(s)	977, 1624, 2091, 2264, 2429
HphI	GGTGA	5 cut(s)	391, 465, 654, 1919, 2165
Hpy166II	GTNNAC	3 cut(s)	2122, 2252, 2438
Hpy8I	GTNNAC	3 cut(s)	2122, 2252, 2438
Hpy99I	CGWCG	1 cut(s)	2706
HpyCH4III	ACNGT	7 cut(s)	157, 451, 881, 987, 2258, 2554, 2786
HpyCH4IV	ACGT	4 cut(s)	1927, 2248, 2529, 2543
HpyF3I	CTNAG	9 cut(s)	393, 534, 612, 933, 1060, 1299, 1335, 2464, 2590
HpySE526I	ACGT	4 cut(s)	1927, 2248, 2529, 2543
HspAI	GCGC	2 cut(s)	1963, 2736
KroI	GCCGGC	1 cut(s)	2090
KroNI	GCCGGC	1 cut(s)	2092
LguI	GCTCTTC	1 cut(s)	1740
LmnI	GCTCC	5 cut(s)	1016, 1478, 1501, 1638, 2357
LweI	GCATC	8 cut(s)	262, 340, 445, 1117, 1125, 1420, 2052, 2519
MaeI	CTAG	3 cut(s)	939, 1131, 2690
MaeII	ACGT	4 cut(s)	1927, 2248, 2529, 2543
MaeIII	GTNAC	5 cut(s)	259, 397, 1396, 1928, 2723
MfeI	CAATTG	2 cut(s)	1191, 1328
MflI	RGATCY	6 cut(s)	167, 287, 640, 769, 1303, 1711
MhlI	GDGCHC	1 cut(s)	2326
MluCI	AATT	9 cut(s)	185, 324, 465, 708, 1088, 1191, 1328, 1506, 1834
MlyI	GAGTC	5 cut(s)	41, 1060, 1925, 2281, 2720
MmeI	TCCRAC	1 cut(s)	2133
Mph1103I	ATGCAT	3 cut(s)	1053, 1140, 1413
MroNI	GCCGGC	1 cut(s)	2090
MroXI	GAANNNNTTC	2 cut(s)	1773, 2160
MslI	CAYNNNNRTG	4 cut(s)	702, 1557, 1668, 1866
MspA1I	CMGCKG	2 cut(s)	404, 482
MspCI	CTTAAG	2 cut(s)	815, 826
MspI	CCGG	5 cut(s)	977, 1624, 2091, 2264, 2429
MspR9I	CCNGG	9 cut(s)	21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
MunI	CAATTG	2 cut(s)	1191, 1328
Mva1269I	GAATGC	5 cut(s)	24, 209, 1984, 2014, 2069
MvaI	CCWGG	6 cut(s)	21, 341, 425, 748, 1526, 1709
MvnI	CGCG	1 cut(s)	1965
NaeI	GCCGGC	1 cut(s)	2092
NciI	CCSGG	3 cut(s)	978, 1624, 1625
NcoI	CCATGG	1 cut(s)	666
NdeI	CATATG	1 cut(s)	1617
NgoMIV	GCCGGC	1 cut(s)	2090
NlaIV	GGNNCC	6 cut(s)	745, 1480, 1846, 2323, 2324, 2325
NmuCI	GTSAC	3 cut(s)	397, 1928, 2723
NsiI	ATGCAT	3 cut(s)	1053, 1140, 1413
NspI	RCATGY	4 cut(s)	1055, 1142, 2041, 2827
PagI	TCATGA	2 cut(s)	844, 2304
PaqCI	CACCTGC	1 cut(s)	2306
PceI	AGGCCT	1 cut(s)	2238
PciI	ACATGT	2 cut(s)	2037, 2823
PciSI	GCTCTTC	1 cut(s)	1740
PctI	GAATGC	5 cut(s)	24, 209, 1984, 2014, 2069
PdiI	GCCGGC	1 cut(s)	2092
PdmI	GAANNNNTTC	2 cut(s)	1773, 2160
PfeI	GAWTC	5 cut(s)	494, 1151, 1252, 1916, 2330
PflMI	CCANNNNNTGG	1 cut(s)	1180
PfoI	TCCNGGA	1 cut(s)	976
PleI	GAGTC	5 cut(s)	41, 1060, 1925, 2281, 2720
PmaCI	CACGTG	1 cut(s)	1928
PmlI	CACGTG	1 cut(s)	1928
PpsI	GAGTC	5 cut(s)	41, 1060, 1925, 2281, 2720
Ppu21I	YACGTR	1 cut(s)	1928
PpuMI	RGGWCCY	2 cut(s)	343, 2674
PscI	ACATGT	2 cut(s)	2037, 2823
PshAI	GACNNNNGTC	1 cut(s)	1618
PshBI	ATTAAT	2 cut(s)	711, 1689
PsiI	TTATAA	1 cut(s)	1511
Psp5II	RGGWCCY	2 cut(s)	343, 2674
Psp6I	CCWGG	6 cut(s)	19, 339, 423, 746, 1524, 1707
PspCI	CACGTG	1 cut(s)	1928
PspEI	GGTNACC	1 cut(s)	397
PspFI	CCCAGC	1 cut(s)	2392
PspGI	CCWGG	6 cut(s)	19, 339, 423, 746, 1524, 1707
PspN4I	GGNNCC	6 cut(s)	745, 1480, 1846, 2323, 2324, 2325
PspOMI	GGGCCC	1 cut(s)	2322
PspPPI	RGGWCCY	2 cut(s)	343, 2674
PsrI	GAACNNNNNNTAC	2 cut(s)	1593, 1625
PstI	CTGCAG	1 cut(s)	1225
PsuI	RGATCY	6 cut(s)	167, 287, 640, 769, 1303, 1711
PvuII	CAGCTG	1 cut(s)	482
RsaI	GTAC	2 cut(s)	1706, 2681
RsaNI	GTAC	2 cut(s)	1705, 2680
RseI	CAYNNNNRTG	4 cut(s)	702, 1557, 1668, 1866
SapI	GCTCTTC	1 cut(s)	1740
SchI	GAGTC	5 cut(s)	41, 1060, 1925, 2281, 2720
ScrFI	CCNGG	9 cut(s)	21, 341, 425, 748, 978, 1526, 1624, 1625, 1709
SduI	GDGCHC	1 cut(s)	2326
SfaNI	GCATC	8 cut(s)	262, 340, 445, 1117, 1125, 1420, 2052, 2519
SfcI	CTRYAG	4 cut(s)	1221, 1263, 2085, 2785
SinI	GGWCC	5 cut(s)	343, 744, 1534, 2266, 2674
SmaI	CCCGGG	1 cut(s)	1625
SmiMI	CAYNNNNRTG	4 cut(s)	702, 1557, 1668, 1866
SmlI	CTYRAG	3 cut(s)	310, 815, 826
SmoI	CTYRAG	3 cut(s)	310, 815, 826
Sse9I	AATT	9 cut(s)	185, 324, 465, 708, 1088, 1191, 1328, 1506, 1834
SseBI	AGGCCT	1 cut(s)	2238
SsiI	CCGC	6 cut(s)	402, 557, 1475, 2013, 2094, 2142
SspMI	CTAG	3 cut(s)	939, 1131, 2690
StuI	AGGCCT	1 cut(s)	2238
StyD4I	CCNGG	9 cut(s)	19, 339, 423, 746, 976, 1524, 1622, 1623, 1707
StyI	CCWWGG	3 cut(s)	111, 666, 2622
TaaI	ACNGT	7 cut(s)	157, 451, 881, 987, 2258, 2554, 2786
TaiI	ACGT	4 cut(s)	1930, 2251, 2532, 2546
TaqI	TCGA	7 cut(s)	201, 298, 368, 1738, 1919, 2034, 2495
TasI	AATT	9 cut(s)	185, 324, 465, 708, 1088, 1191, 1328, 1506, 1834
TatI	WGTACW	1 cut(s)	2679
TauI	GCSGC	2 cut(s)	2015, 2144
TfiI	GAWTC	5 cut(s)	494, 1151, 1252, 1916, 2330
TscAI	CASTG	6 cut(s)	289, 538, 1552, 1735, 2289, 2340
TseFI	GTSAC	3 cut(s)	397, 1928, 2723
Tsp45I	GTSAC	3 cut(s)	397, 1928, 2723
TspGWI	ACGGA	1 cut(s)	1151
TspMI	CCCGGG	1 cut(s)	1623
TspRI	CASTG	6 cut(s)	289, 538, 1552, 1735, 2289, 2340
Van91I	CCANNNNNTGG	1 cut(s)	1180
Vha464I	CTTAAG	2 cut(s)	815, 826
VpaK11BI	GGWCC	5 cut(s)	343, 744, 1534, 2266, 2674
VspI	ATTAAT	2 cut(s)	711, 1689
XapI	RAATTY	1 cut(s)	1088
XbaI	TCTAGA	1 cut(s)	938
XceI	RCATGY	4 cut(s)	1055, 1142, 2041, 2827
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2384
XmaI	CCCGGG	1 cut(s)	1623
XmnI	GAANNNNTTC	2 cut(s)	1773, 2160
XspI	CTAG	3 cut(s)	939, 1131, 2690
Zsp2I	ATGCAT	3 cut(s)	1053, 1140, 1413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.