pycom04g09090

adenosine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0002092
Physical Location & Seq
Reverse (-)
11368280 .. 11369643
1364 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 627 bp
ATGCTTCAAGTACCTGGTGCAACAAGTTATATGGGCTCCATTGGAAAGGACAAGTATGGGGAAGAGATGAAGAAGAACTCAAAACTTGCTGGTGTTAATGTTCACTATCATGTGGATGAGACTGCCCCAACAGGAACTTGTGCTGTCTGTGTTGTTGGTAGTCACAGGTCACTTGTTGCCAATTTGTCAGCTGCCAACTGCTACAAAATTGAGCATTTAAAAAAAACCCAAAAATTGGTTGAGAAGGCCAAGTACATCTACATTGCTGGGTTTTTTCTAACCGTATCCCCAGGCTCCATTCAGCTTGTTGCTGAACATGCTGCTGCAAATAACAAGCTATTGCTAAACAGAGTCTTGACTCTTGAAAATTCCCTTTATCTGCAGGTTTTCTCGATGAACCTTTCTGCTCCATTCATGTGCGAGTTTTTCAAGGATGCTCAGGAGAAAGCCTTGCCGTATGTGGACTATGTTTTTGGAAACGAGACAGAAGCAAGAACCTTTTCCAAAGTTCATGGCTGGGAGACCAATGATGTCGAGCAAATAGCTCTAAAGATCGATCCCAATGGCCCAAAGCATCAGGGACACACAAGAGGATTACTGTTATCACTCAGGGTGCAGATCCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004001 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006166 GO:0006167 GO:0006169 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0030054 GO:0034404 GO:0034641 GO:0034654 GO:0042221 GO:0042278 GO:0042451 GO:0042455 GO:0043094 GO:0043101 GO:0043167 GO:0043169 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046085 GO:0046086 GO:0046128 GO:0046129 GO:0046390 GO:0046483 GO:0046683 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0080094 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 map00230 map01100
Pfam Domains
Protein Families
PfkB

Protein Analysis

209

Amino Acids

23.02

Weight (kDa)

8.58

Isoelectric Point (pI)

22.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 7 - 192 6.4e-30 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 373
AccB7I CCANNNNNTGG 1 cut(s) 235
AclWI GGATC 2 cut(s) 551, 613
AcsI RAATTY 1 cut(s) 367
AfaI GTAC 2 cut(s) 12, 254
AfiI CCNNNNNNNGG 1 cut(s) 235
AgsI TTSAA 3 cut(s) 8, 365, 430
AjnI CCWGG 2 cut(s) 13, 289
AluBI AGCT 4 cut(s) 191, 304, 337, 545
AluI AGCT 4 cut(s) 191, 304, 337, 545
Alw26I GTCTC 3 cut(s) 113, 476, 515
AlwI GGATC 2 cut(s) 551, 613
AoxI GGCC 2 cut(s) 246, 565
ApeKI GCWGC 3 cut(s) 191, 320, 323
ApoI RAATTY 1 cut(s) 367
ArsI GACNNNNNNTTYG 2 cut(s) 455, 487
Asp700I GAANNNNTTC 1 cut(s) 499
AspS9I GGNCC 1 cut(s) 566
BanII GRGCYC 1 cut(s) 38
BarI GAAGNNNNNNTAC 2 cut(s) 236, 268
BbvI GCAGC 3 cut(s) 178, 307, 310
BceAI ACGGC 1 cut(s) 439
BciT130I CCWGG 2 cut(s) 15, 291
BciVI GTATCC 1 cut(s) 295
BcoDI GTCTC 3 cut(s) 113, 476, 515
BfmI CTRYAG 1 cut(s) 380
BfuAI ACCTGC 1 cut(s) 373
BfuI GTATCC 1 cut(s) 295
BisI GCNGC 3 cut(s) 192, 321, 324
BlsI GCNGC 3 cut(s) 193, 322, 325
Bme1390I CCNGG 2 cut(s) 15, 291
BmgT120I GGNCC 1 cut(s) 566
BmiI GGNNCC 2 cut(s) 37, 295
BmrFI CCNGG 2 cut(s) 15, 291
BmsI GCATC 2 cut(s) 424, 583
Bpu10I CCTNAGC 1 cut(s) 438
Bsa29I ATCGAT 1 cut(s) 555
BsaI GGTCTC 1 cut(s) 515
BsaJI CCNNGG 1 cut(s) 289
Bsc4I CCNNNNNNNGG 1 cut(s) 235
Bse3DI GCAATG 1 cut(s) 261
BseBI CCWGG 2 cut(s) 15, 291
BseCI ATCGAT 1 cut(s) 555
BseDI CCNNGG 1 cut(s) 289
BseGI GGATG 2 cut(s) 121, 439
BseLI CCNNNNNNNGG 1 cut(s) 235
BseMI GCAATG 1 cut(s) 261
BseMII CTCAG 2 cut(s) 452, 622
BseXI GCAGC 3 cut(s) 178, 307, 310
BseYI CCCAGC 2 cut(s) 266, 516
BshFI GGCC 2 cut(s) 248, 567
BshVI ATCGAT 1 cut(s) 555
BslFI GGGAC 1 cut(s) 594
BslI CCNNNNNNNGG 1 cut(s) 235
BsmAI GTCTC 3 cut(s) 113, 476, 515
BsmFI GGGAC 1 cut(s) 594
BsnI GGCC 2 cut(s) 248, 567
Bso31I GGTCTC 1 cut(s) 515
Bsp1286I GDGCHC 1 cut(s) 38
Bsp143I GATC 3 cut(s) 552, 556, 618
BspANI GGCC 2 cut(s) 248, 567
BspCNI CTCAG 2 cut(s) 451, 621
BspDI ATCGAT 1 cut(s) 555
BspLI GGNNCC 2 cut(s) 37, 295
BspMAI CTGCAG 1 cut(s) 384
BspMI ACCTGC 1 cut(s) 373
BspPI GGATC 2 cut(s) 551, 613
BspTNI GGTCTC 1 cut(s) 515
BsrDI GCAATG 1 cut(s) 261
BssECI CCNNGG 1 cut(s) 289
BssMI GATC 3 cut(s) 552, 556, 618
Bst2UI CCWGG 2 cut(s) 15, 291
Bst4CI ACNGT 2 cut(s) 283, 600
Bst6I CTCTTC 1 cut(s) 57
BstDEI CTNAG 2 cut(s) 438, 608
BstF5I GGATG 2 cut(s) 121, 439
BstKTI GATC 3 cut(s) 555, 559, 621
BstMAI GTCTC 3 cut(s) 113, 476, 515
BstMBI GATC 3 cut(s) 552, 556, 618
BstMWI GCNNNNNNNGC 1 cut(s) 317
BstNI CCWGG 2 cut(s) 15, 291
BstNSI RCATGY 1 cut(s) 320
BstSCI CCNGG 2 cut(s) 13, 289
BstSFI CTRYAG 1 cut(s) 380
BstV1I GCAGC 3 cut(s) 178, 307, 310
BstX2I RGATCY 1 cut(s) 618
BstYI RGATCY 1 cut(s) 618
Bsu15I ATCGAT 1 cut(s) 555
BsuI GTATCC 1 cut(s) 295
BsuRI GGCC 2 cut(s) 248, 567
BsuTUI ATCGAT 1 cut(s) 555
BtsCI GGATG 2 cut(s) 121, 439
BveI ACCTGC 1 cut(s) 373
Cfr13I GGNCC 1 cut(s) 566
ClaI ATCGAT 1 cut(s) 555
CsiI ACCWGGT 1 cut(s) 13
Csp6I GTAC 2 cut(s) 11, 253
CviAII CATG 4 cut(s) 110, 317, 415, 512
CviQI GTAC 2 cut(s) 11, 253
DdeI CTNAG 2 cut(s) 438, 608
DpnI GATC 3 cut(s) 554, 558, 620
DpnII GATC 3 cut(s) 552, 556, 618
DraI TTTAAA 1 cut(s) 219
Eam1104I CTCTTC 1 cut(s) 57
EarI CTCTTC 1 cut(s) 57
Eco24I GRGCYC 1 cut(s) 38
Eco31I GGTCTC 1 cut(s) 515
EcoRII CCWGG 2 cut(s) 13, 289
EcoT38I GRGCYC 1 cut(s) 38
FaeI CATG 4 cut(s) 113, 320, 418, 515
FaiI YATR 9 cut(s) 30, 32, 57, 111, 318, 416, 459, 468, 513
FaqI GGGAC 1 cut(s) 594
FatI CATG 4 cut(s) 109, 316, 414, 511
Fnu4HI GCNGC 3 cut(s) 192, 321, 324
FokI GGATG 2 cut(s) 128, 446
FriOI GRGCYC 1 cut(s) 38
Fsp4HI GCNGC 3 cut(s) 192, 321, 324
GluI GCNGC 3 cut(s) 192, 321, 324
GsaI CCCAGC 2 cut(s) 270, 520
HaeIII GGCC 2 cut(s) 248, 567
Hin1II CATG 4 cut(s) 113, 320, 418, 515
HinfI GANTC 2 cut(s) 351, 358
Hpy166II GTNNAC 2 cut(s) 103, 463
Hpy188III TCNNGA 4 cut(s) 355, 362, 391, 440
Hpy8I GTNNAC 2 cut(s) 103, 463
HpyAV CCTTC 1 cut(s) 238
HpyCH4III ACNGT 2 cut(s) 283, 600
HpyCH4V TGCA 4 cut(s) 20, 326, 382, 616
HpyF10VI GCNNNNNNNGC 1 cut(s) 317
HpyF3I CTNAG 2 cut(s) 438, 608
Hsp92II CATG 4 cut(s) 113, 320, 418, 515
Kzo9I GATC 3 cut(s) 552, 556, 618
LmnI GCTCC 3 cut(s) 41, 299, 412
Lsp1109I GCAGC 3 cut(s) 178, 307, 310
LweI GCATC 2 cut(s) 424, 583
MabI ACCWGGT 1 cut(s) 13
MaeIII GTNAC 2 cut(s) 161, 168
MalI GATC 3 cut(s) 554, 558, 620
MboI GATC 3 cut(s) 552, 556, 618
MboII GAAGA 3 cut(s) 74, 82, 85
MflI RGATCY 1 cut(s) 618
MhlI GDGCHC 1 cut(s) 38
MluCI AATT 4 cut(s) 181, 207, 233, 367
MlyI GAGTC 2 cut(s) 352, 360
MnlI CCTC 1 cut(s) 584
MroXI GAANNNNTTC 1 cut(s) 499
MseI TTAA 2 cut(s) 96, 218
MslI CAYNNNNRTG 3 cut(s) 108, 114, 415
MspA1I CMGCKG 1 cut(s) 191
MspR9I CCNGG 2 cut(s) 15, 291
MvaI CCWGG 2 cut(s) 15, 291
MwoI GCNNNNNNNGC 1 cut(s) 317
NdeII GATC 3 cut(s) 552, 556, 618
NlaIII CATG 4 cut(s) 113, 320, 418, 515
NlaIV GGNNCC 2 cut(s) 37, 295
NmuCI GTSAC 2 cut(s) 161, 168
NspI RCATGY 1 cut(s) 320
PdmI GAANNNNTTC 1 cut(s) 499
PflMI CCANNNNNTGG 1 cut(s) 235
PkrI GCNGC 3 cut(s) 193, 322, 325
PleI GAGTC 2 cut(s) 352, 359
PpsI GAGTC 2 cut(s) 352, 359
Psp6I CCWGG 2 cut(s) 13, 289
PspFI CCCAGC 2 cut(s) 266, 516
PspGI CCWGG 2 cut(s) 13, 289
PspN4I GGNNCC 2 cut(s) 37, 295
PspPI GGNCC 1 cut(s) 566
PstI CTGCAG 1 cut(s) 384
PsuI RGATCY 1 cut(s) 618
PvuII CAGCTG 1 cut(s) 191
RsaI GTAC 2 cut(s) 12, 254
RsaNI GTAC 2 cut(s) 11, 253
RseI CAYNNNNRTG 3 cut(s) 108, 114, 415
SaqAI TTAA 2 cut(s) 96, 218
SatI GCNGC 3 cut(s) 192, 321, 324
Sau3AI GATC 3 cut(s) 552, 556, 618
Sau96I GGNCC 1 cut(s) 566
SchI GAGTC 2 cut(s) 352, 360
ScrFI CCNGG 2 cut(s) 15, 291
SduI GDGCHC 1 cut(s) 38
SetI ASST 9 cut(s) 16, 170, 193, 306, 339, 387, 402, 500, 547
SexAI ACCWGGT 1 cut(s) 13
SfaNI GCATC 2 cut(s) 424, 583
SfcI CTRYAG 1 cut(s) 380
SmiMI CAYNNNNRTG 3 cut(s) 108, 114, 415
Sse9I AATT 4 cut(s) 181, 207, 233, 367
StyD4I CCNGG 2 cut(s) 13, 289
TaaI ACNGT 2 cut(s) 283, 600
TaqI TCGA 3 cut(s) 392, 534, 555
TasI AATT 4 cut(s) 181, 207, 233, 367
TatI WGTACW 1 cut(s) 252
Tru1I TTAA 2 cut(s) 96, 218
Tru9I TTAA 2 cut(s) 96, 218
TseFI GTSAC 2 cut(s) 161, 168
TseI GCWGC 3 cut(s) 191, 320, 323
Tsp45I GTSAC 2 cut(s) 161, 168
TspDTI ATGAA 4 cut(s) 83, 403, 410, 500
Van91I CCANNNNNTGG 1 cut(s) 235
XapI RAATTY 1 cut(s) 367
XceI RCATGY 1 cut(s) 320
XmnI GAANNNNTTC 1 cut(s) 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.