Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0004926

Physical Location & Seq

Genomic Coordinates Reverse (-)

14536102 .. 14538588

Gene Structure 2487 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g11690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGGGAAACGCCGTCGGAAAAGCCGGTCGCTGTTTCTGCACCACCGGAGAAATCTCCCAGCGACACGGCAACTCCGTCGTTTTGTCGGACCCGCTTGACGAGGGCCTGGGCCATTCCTTCTGCTACTTCCGGCCCGACTCCTCCGATACGACATTGTCCAAAGTCTCGTCCGAAGAGCCGAACCCGCCAACGACGACGTTCCGGTCAATCTCCGGAGCCTCCGTCAGCGCTAACACATTCACGATGCACTCGACTTCTCTCTGCAAGCTCTACCCGTACAGCGCCGGCTCAGATCGGGCGGCGAAGTTCGAGAGCTCCACCTCGTTCGCCTCCATTCCTCTGCAGCCGGTTCCTCGGAAGTCGTACCAGGGAGTTTCGGGGCCGGCTCCGATCGAGATAGGCTTCTTGTCGGGTCCGATAGAGCGAGGTTACTTGTCTAGCCCAATTGATCGTGGGATGTATTCGGATCAGATCGAAAAAGAGTGCCAGAAACTATCCAGAAGACTTTCTTTTGGCGTTGAAACAAAACCCAAAATAAGGAGCTTGATGAAGATTATTAGAAGAGCGATTTCGAGCGCCATGATTCGAGGGCAGAAATCGAGCATTTCTCCGTTGAAATGTGGCATTTCGGTAAAAGAATCGGATTTGGAGAAGGTGGAGGAGAATCAGAATGGGACTTGCAGTAGTACTAATTTGAGTAGCCATGTGAGTTTGAGTAATGAGAATGAGGATGGTGGGAGTGGACATTACTCGATAGGAAGCCAGAATCTTCAATGGAAAGCTGGCGAGGATCGAGTTCATGTGGTTGTTTCGGAGGAACATGGCTGGGTTTTTGTGGGGATTTATGATGGGTTTAATGGCCCTGATGCTCCTGATTACTTGCTTTCCAATCTTTATTCTACTGTGCACAAGGAACTCAAAGGGTTGCTCTGGAATGACAAGTTCGAAATTGAAATCAAATCCGCAGAGATAAATTCATTGAACACGGATGTGGATTCAAGTTCGTTGAAGGAAACTAATCGAACCCAAATGGGGAATCGGATGCCTGATGGAGTTGATGAGGGGAATTATGCATTAGAAAATGGAGAAATGGATGGAAATGCTAATTCAATGAGAAAACAGAGTAATGCGTTGGAAAATAAGTTGGAGGGGACTCAGAGGAGGTGGAAGTGTGAATGGGATAGAGAAAGGCCAGAGCTTGATCGGAAGTTACAGCATAATATAAAGCGTCCAGAGTCTATTGGTGTGGCGGGTGTCAACCCCTATGATGTTCTTAAAGCGCTTTCAGAGGCATTGAGGAAGACAGAGGATGCATTTTTGGACGCTGCAGATAAGATGGTGACTGATAATCCTGAGTTGGCCTTGATGGGTTCTTGTGTTTTGGTAATGCTGATGAAGGGAGATGATGTTTACTTGTTGAACGTTGGGGACAGTAGGGCTGTTTTAGCTCGGAAGTCGGAACAAAACGTTCGGCGGAACTTGGATCGGATAAGTGAAGATGAGCCTTCACTTGATTCGTCAAATGCTGATGAAAGTTACAGTTTAAAAAATTTGACTGCGCTTCAGCTCACCATGGATCACAGCACATACGTGAAGGAGGAAGTTCAAAGAATAAAGAAAGAACATCCAGATGATACATCTGTGATATCGAATGACAGAGTGAAAGGTTATTTGAAGGTCACTCGAGCGTTTGGAGCTGGCTTTCTAAAACAGCCGAAGTGGAATGATGCACTGCTAGAGATGTTTAGGCTCAACTATGTTGGGACTGCTCCCTACCTCACCTGCAATCCGTCACTCTACCACCACAAACTCAGCCCGAGAGACAGGCTCTTAATATTGTCTTCTGATGGACTCTACCAGTACTTCACTAATGAAGAATCCGTCTCTGAAGTTGAATTGTTCATCTCTTCATTTCCCGATGGAGATCCTGCACAACATCTCATCGAAGAAGTGTTGTTTCGAGCAGCAAAGAAAGCTGGAATGGCATTCCATGAGTTGTTAGATATCCCGCAAGGGGAACGCCGACGGTACCATGATGACATTTCGGTCATTGTAATTTCGTTGGAGGGAAGAATATGGAGATCATCGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0016020 GO:0032501 GO:0032502 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

698

Amino Acids

77.6

Weight (kDa)

5.66

Isoelectric Point (pI)

44.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02400
fragaria_vesca	FvH4_6g13730
malus_domestica	MD04G1128600.v1.1 MD12G1141300.v1.1
prunus_persica	Prupe.6G254600_v2.0.a1 Prupe.6G254600_v2.0.a1 Prupe.6G254600_v2.0.a1
pyrus_communis	pycom04g11690
rosa_chinensis	RchiOBHm_Chr3g0466621 RchiOBHm_Chr3g0466691 RchiOBHm_Chr3g0466701
rosa_laevigata	RLG00000024560
rosa_multiflora	Rmu_co8411995.1_g000001 Rmu_sc0001726.1_g000001 Rmu_sc0008845.1_g000002 Rmu_sc0008845.1_g000005 Rmu_sc0023740.1_g000001 Rmu_sc0037733.1_g000001 Rmu_sc0039423.1_g000001
rosa_roxburghii	Rroxscaffold_6G00403980 Rroxscaffold_6G00414300 Rroxscaffold_6G00414310
rosa_rugosa	Rorug03G0083100
rosa_samantha	Rh3AG130000 Rh3AG130300 Rh3AG130400 Rh3BG151400 Rh3CG151200 Rh3DG152100
rosa_wichuraiana	Rw3G012290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1790
AasI	GACNNNNNNGTC	2 cut(s)	202, 2045
Acc36I	ACCTGC	1 cut(s)	1790
Acc65I	GGTACC	1 cut(s)	2028
AccB1I	GGYRCC	1 cut(s)	2028
AccIII	TCCGGA	1 cut(s)	212
AciI	CCGC	7 cut(s)	92, 185, 299, 963, 1250, 1474, 2009
AclI	AACGTT	2 cut(s)	1422, 1467
AclWI	GGATC	5 cut(s)	474, 798, 1491, 1584, 1919
AcsI	RAATTY	2 cut(s)	973, 1549
AcuI	CTGAAG	2 cut(s)	1547, 1908
AfaI	GTAC	5 cut(s)	278, 365, 688, 1862, 2030
AfeI	AGCGCT	2 cut(s)	229, 1281
AfiI	CCNNNNNNNGG	3 cut(s)	537, 1032, 2014
AjnI	CCWGG	2 cut(s)	105, 366
AleI	CACNNNNGTG	2 cut(s)	989, 1589
AluBI	AGCT	9 cut(s)	268, 315, 543, 782, 1198, 1448, 1567, 1697, 1976
AluI	AGCT	9 cut(s)	268, 315, 543, 782, 1198, 1448, 1567, 1697, 1976
Alw21I	GWGCWC	2 cut(s)	317, 909
Alw26I	GTCTC	3 cut(s)	169, 1815, 1888
Alw44I	GTGCAC	1 cut(s)	905
AlwI	GGATC	5 cut(s)	474, 798, 1491, 1584, 1919
Ama87I	CYCGRG	2 cut(s)	1683, 1816
Aor13HI	TCCGGA	1 cut(s)	212
Aor51HI	AGCGCT	2 cut(s)	229, 1281
AoxI	GGCC	7 cut(s)	103, 109, 131, 380, 859, 1190, 1359
ApaLI	GTGCAC	1 cut(s)	905
ApeKI	GCWGC	3 cut(s)	343, 1325, 1964
ApoI	RAATTY	2 cut(s)	973, 1549
Asp700I	GAANNNNTTC	1 cut(s)	505
Asp718I	GGTACC	1 cut(s)	2028
AspLEI	GCGC	5 cut(s)	230, 284, 578, 1282, 1561
AspS9I	GGNCC	7 cut(s)	88, 103, 109, 132, 380, 413, 860
AsuHPI	GGTGA	3 cut(s)	1351, 1561, 1771
AsuII	TTCGAA	1 cut(s)	945
AvaI	CYCGRG	2 cut(s)	1683, 1816
AvaII	GGWCC	2 cut(s)	88, 413
BaeGI	GKGCMC	1 cut(s)	909
BaeI	ACNNNNGTAYC	2 cut(s)	1626, 1659
BanI	GGYRCC	1 cut(s)	2028
BanII	GRGCYC	1 cut(s)	317
BbsI	GAAGAC	3 cut(s)	508, 1307, 1833
Bbv12I	GWGCWC	2 cut(s)	317, 909
BbvI	GCAGC	3 cut(s)	355, 1312, 1976
BccI	CCATC	8 cut(s)	725, 842, 1043, 1088, 1330, 1360, 1841, 1913
BceAI	ACGGC	1 cut(s)	82
BcgI	CGANNNNNNTGC	2 cut(s)	58, 92
BciT130I	CCWGG	2 cut(s)	107, 368
BcoDI	GTCTC	3 cut(s)	169, 1815, 1888
BfaI	CTAG	2 cut(s)	438, 1736
BfmI	CTRYAG	2 cut(s)	341, 1326
BfoI	RGCGCY	4 cut(s)	231, 285, 579, 1283
BfuAI	ACCTGC	1 cut(s)	1790
BisI	GCNGC	4 cut(s)	300, 344, 1326, 1965
BlsI	GCNGC	4 cut(s)	301, 345, 1327, 1966
BmcAI	AGTACT	2 cut(s)	688, 1862
Bme1390I	CCNGG	2 cut(s)	107, 368
Bme18I	GGWCC	2 cut(s)	88, 413
BmeT110I	CYCGRG	2 cut(s)	1683, 1816
BmgT120I	GGNCC	7 cut(s)	88, 103, 109, 132, 380, 413, 860
BmiI	GGNNCC	7 cut(s)	90, 217, 351, 381, 387, 414, 2030
BmrFI	CCNGG	2 cut(s)	107, 368
BmsI	GCATC	5 cut(s)	234, 856, 1032, 1300, 1717
BpiI	GAAGAC	3 cut(s)	508, 1307, 1833
BplI	GAGNNNNNCTC	4 cut(s)	592, 624, 1812, 1844
Bpu14I	TTCGAA	1 cut(s)	945
BsaAI	YACGTR	1 cut(s)	1591
BsaBI	GATNNNNATC	1 cut(s)	1923
BsaJI	CCNNGG	4 cut(s)	106, 353, 367, 1572
BsaWI	WCCGGW	3 cut(s)	44, 201, 212
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 86, 207, 237, 1392, 1422
Bsc4I	CCNNNNNNNGG	3 cut(s)	537, 1032, 2014
Bse118I	RCCGGY	4 cut(s)	23, 284, 346, 382
Bse1I	ACTGG	1 cut(s)	1858
Bse8I	GATNNNNATC	1 cut(s)	1923
BseAI	TCCGGA	1 cut(s)	212
BseBI	CCWGG	2 cut(s)	107, 368
BseDI	CCNNGG	4 cut(s)	106, 353, 367, 1572
BseGI	GGATG	7 cut(s)	462, 736, 994, 1047, 1099, 1315, 1624
BseJI	GATNNNNATC	1 cut(s)	1923
BseLI	CCNNNNNNNGG	3 cut(s)	537, 1032, 2014
BseMII	CTCAG	4 cut(s)	303, 1169, 1344, 1825
BseNI	ACTGG	1 cut(s)	1858
BseRI	GAGGAG	3 cut(s)	130, 674, 1174
BseSI	GKGCMC	1 cut(s)	909
BseXI	GCAGC	3 cut(s)	355, 1312, 1976
BseYI	CCCAGC	2 cut(s)	57, 825
BsgI	GTGCAG	2 cut(s)	22, 1914
Bsh1285I	CGRYCG	2 cut(s)	28, 393
BshFI	GGCC	7 cut(s)	105, 111, 133, 382, 861, 1192, 1361
BshNI	GGYRCC	1 cut(s)	2028
BsiEI	CGRYCG	2 cut(s)	28, 393
BsiHKAI	GWGCWC	2 cut(s)	317, 909
BsiHKCI	CYCGRG	2 cut(s)	1683, 1816
BsiSI	CCGG	8 cut(s)	24, 45, 130, 202, 213, 285, 347, 383
BslFI	GGGAC	4 cut(s)	688, 1165, 1442, 1777
BslI	CCNNNNNNNGG	3 cut(s)	537, 1032, 2014
BsmAI	GTCTC	3 cut(s)	169, 1815, 1888
BsmBI	CGTCTC	1 cut(s)	1888
BsmFI	GGGAC	4 cut(s)	688, 1165, 1442, 1777
BsmI	GAATGC	1 cut(s)	1985
BsnI	GGCC	7 cut(s)	105, 111, 133, 382, 861, 1192, 1361
BsoBI	CYCGRG	2 cut(s)	1683, 1816
Bsp119I	TTCGAA	1 cut(s)	945
Bsp1286I	GDGCHC	2 cut(s)	317, 909
Bsp13I	TCCGGA	1 cut(s)	212
Bsp19I	CCATGG	1 cut(s)	1572
BspACI	CCGC	7 cut(s)	92, 185, 299, 963, 1250, 1474, 2009
BspANI	GGCC	7 cut(s)	105, 111, 133, 382, 861, 1192, 1361
BspCNI	CTCAG	4 cut(s)	302, 1168, 1345, 1824
BspEI	TCCGGA	1 cut(s)	212
BspLI	GGNNCC	7 cut(s)	90, 217, 351, 381, 387, 414, 2030
BspMAI	CTGCAG	2 cut(s)	345, 1330
BspMI	ACCTGC	1 cut(s)	1790
BspPI	GGATC	5 cut(s)	474, 798, 1491, 1584, 1919
BspQI	GCTCTTC	2 cut(s)	168, 556
BspT104I	TTCGAA	1 cut(s)	945
BspT107I	GGYRCC	1 cut(s)	2028
BsrFI	RCCGGY	4 cut(s)	23, 284, 346, 382
BsrI	ACTGG	1 cut(s)	1858
BssAI	RCCGGY	4 cut(s)	23, 284, 346, 382
BssECI	CCNNGG	4 cut(s)	106, 353, 367, 1572
BssT1I	CCWWGG	1 cut(s)	1572
Bst2UI	CCWGG	2 cut(s)	107, 368
Bst4CI	ACNGT	4 cut(s)	904, 1433, 1541, 2028
Bst6I	CTCTTC	3 cut(s)	168, 556, 1912
BstBAI	YACGTR	1 cut(s)	1591
BstBI	TTCGAA	1 cut(s)	945
BstC8I	GCNNGC	5 cut(s)	266, 286, 384, 784, 1699
BstDEI	CTNAG	4 cut(s)	289, 1155, 1353, 1811
BstDSI	CCRYGG	1 cut(s)	1572
BstF5I	GGATG	7 cut(s)	462, 736, 994, 1047, 1099, 1315, 1624
BstH2I	RGCGCY	4 cut(s)	231, 285, 579, 1283
BstHHI	GCGC	5 cut(s)	230, 284, 578, 1282, 1561
BstMAI	GTCTC	3 cut(s)	169, 1815, 1888
BstMCI	CGRYCG	2 cut(s)	28, 393
BstMWI	GCNNNNNNNGC	6 cut(s)	36, 184, 1445, 1694, 1973, 1982
BstNI	CCWGG	2 cut(s)	107, 368
BstSCI	CCNGG	2 cut(s)	105, 366
BstSFI	CTRYAG	2 cut(s)	341, 1326
BstSLI	GKGCMC	1 cut(s)	909
BstV1I	GCAGC	3 cut(s)	355, 1312, 1976
BstV2I	GAAGAC	3 cut(s)	508, 1307, 1833
BstX2I	RGATCY	1 cut(s)	1924
BstYI	RGATCY	1 cut(s)	1924
BsuRI	GGCC	7 cut(s)	105, 111, 133, 382, 861, 1192, 1361
BtgI	CCRYGG	1 cut(s)	1572
BtsCI	GGATG	7 cut(s)	462, 736, 994, 1047, 1099, 1315, 1624
BtsI	GCAGTG	1 cut(s)	1730
BtsIMutI	CAGTG	1 cut(s)	1730
BveI	ACCTGC	1 cut(s)	1790
Cac8I	GCNNGC	5 cut(s)	266, 286, 384, 784, 1699
CfoI	GCGC	5 cut(s)	230, 284, 578, 1282, 1561
Cfr10I	RCCGGY	4 cut(s)	23, 284, 346, 382
Cfr13I	GGNCC	7 cut(s)	88, 103, 109, 132, 380, 413, 860
CseI	GACGC	2 cut(s)	1217, 1331
Csp6I	GTAC	5 cut(s)	277, 364, 687, 1861, 2029
CviAII	CATG	7 cut(s)	580, 704, 800, 821, 1573, 1991, 2033
CviQI	GTAC	5 cut(s)	277, 364, 687, 1861, 2029
DdeI	CTNAG	4 cut(s)	289, 1155, 1353, 1811
DraI	TTTAAA	1 cut(s)	1545
DrdI	GACNNNNNNGTC	2 cut(s)	202, 2045
DseDI	GACNNNNNNGTC	2 cut(s)	202, 2045
Eam1104I	CTCTTC	3 cut(s)	168, 556, 1912
EarI	CTCTTC	3 cut(s)	168, 556, 1912
EciI	GGCGGA	1 cut(s)	1489
Ecl136II	GAGCTC	1 cut(s)	315
Eco130I	CCWWGG	1 cut(s)	1572
Eco24I	GRGCYC	1 cut(s)	317
Eco32I	GATATC	2 cut(s)	1647, 2005
Eco47I	GGWCC	2 cut(s)	88, 413
Eco47III	AGCGCT	2 cut(s)	229, 1281
Eco53kI	GAGCTC	1 cut(s)	315
Eco57I	CTGAAG	2 cut(s)	1547, 1908
Eco88I	CYCGRG	2 cut(s)	1683, 1816
EcoICRI	GAGCTC	1 cut(s)	315
EcoO109I	RGGNCCY	1 cut(s)	103
EcoRII	CCWGG	2 cut(s)	105, 366
EcoRV	GATATC	2 cut(s)	1647, 2005
EcoT14I	CCWWGG	1 cut(s)	1572
EcoT22I	ATGCAT	2 cut(s)	1075, 1315
EcoT38I	GRGCYC	1 cut(s)	317
ErhI	CCWWGG	1 cut(s)	1572
Esp3I	CGTCTC	1 cut(s)	1888
FaeI	CATG	7 cut(s)	583, 707, 803, 824, 1576, 1994, 2036
FalI	AAGNNNNNCTT	2 cut(s)	493, 525
FaqI	GGGAC	4 cut(s)	688, 1165, 1442, 1777
FatI	CATG	7 cut(s)	579, 703, 799, 820, 1572, 1990, 2032
FauI	CCCGC	4 cut(s)	99, 192, 1243, 2016
Fnu4HI	GCNGC	4 cut(s)	300, 344, 1326, 1965
FokI	GGATG	7 cut(s)	469, 743, 1001, 1054, 1106, 1322, 1611
FriOI	GRGCYC	1 cut(s)	317
Fsp4HI	GCNGC	4 cut(s)	300, 344, 1326, 1965
FspBI	CTAG	2 cut(s)	438, 1736
GlaI	GCGC	5 cut(s)	229, 283, 577, 1281, 1560
GluI	GCNGC	4 cut(s)	300, 344, 1326, 1965
GsaI	CCCAGC	2 cut(s)	61, 829
HaeII	RGCGCY	4 cut(s)	231, 285, 579, 1283
HaeIII	GGCC	7 cut(s)	105, 111, 133, 382, 861, 1192, 1361
HapII	CCGG	8 cut(s)	24, 45, 130, 202, 213, 285, 347, 383
HgaI	GACGC	2 cut(s)	1217, 1331
HhaI	GCGC	5 cut(s)	230, 284, 578, 1282, 1561
Hin1II	CATG	7 cut(s)	583, 707, 803, 824, 1576, 1994, 2036
Hin6I	GCGC	5 cut(s)	228, 282, 576, 1280, 1559
HinP1I	GCGC	5 cut(s)	228, 282, 576, 1280, 1559
HincII	GTYRAC	1 cut(s)	1258
HindII	GTYRAC	1 cut(s)	1258
HpaII	CCGG	8 cut(s)	24, 45, 130, 202, 213, 285, 347, 383
HphI	GGTGA	3 cut(s)	1351, 1561, 1771
Hpy166II	GTNNAC	4 cut(s)	743, 907, 1258, 1411
Hpy8I	GTNNAC	4 cut(s)	743, 907, 1258, 1411
Hpy99I	CGWCG	5 cut(s)	17, 80, 196, 199, 2028
HpyAV	CCTTC	7 cut(s)	127, 646, 1003, 1390, 1515, 1588, 1669
HpyCH4III	ACNGT	4 cut(s)	904, 1433, 1541, 2028
HpyCH4IV	ACGT	4 cut(s)	197, 1422, 1467, 1590
HpyF10VI	GCNNNNNNNGC	6 cut(s)	36, 184, 1445, 1694, 1973, 1982
HpyF3I	CTNAG	4 cut(s)	289, 1155, 1353, 1811
HpySE526I	ACGT	4 cut(s)	197, 1422, 1467, 1590
Hsp92II	CATG	7 cut(s)	583, 707, 803, 824, 1576, 1994, 2036
HspAI	GCGC	5 cut(s)	228, 282, 576, 1280, 1559
Kpn2I	TCCGGA	1 cut(s)	212
KpnI	GGTACC	1 cut(s)	2032
KroI	GCCGGC	2 cut(s)	284, 382
KroNI	GCCGGC	2 cut(s)	286, 384
LguI	GCTCTTC	2 cut(s)	168, 556
LmnI	GCTCC	7 cut(s)	215, 320, 391, 540, 874, 1694, 1774
Lsp1109I	GCAGC	3 cut(s)	355, 1312, 1976
LweI	GCATC	5 cut(s)	234, 856, 1032, 1300, 1717
MaeI	CTAG	2 cut(s)	438, 1736
MaeII	ACGT	4 cut(s)	197, 1422, 1467, 1590
MaeIII	GTNAC	6 cut(s)	428, 1209, 1339, 1535, 1678, 1791
MfeI	CAATTG	1 cut(s)	444
MflI	RGATCY	1 cut(s)	1924
MhlI	GDGCHC	2 cut(s)	317, 909
MluCI	AATT	9 cut(s)	444, 691, 948, 973, 1066, 1105, 1549, 1895, 2055
MlyI	GAGTC	4 cut(s)	131, 1147, 1244, 1845
MmeI	TCCRAC	5 cut(s)	66, 1113, 1125, 1437, 2043
Mph1103I	ATGCAT	2 cut(s)	1075, 1315
MroI	TCCGGA	1 cut(s)	212
MroNI	GCCGGC	2 cut(s)	284, 382
MroXI	GAANNNNTTC	1 cut(s)	505
MseI	TTAA	4 cut(s)	855, 1275, 1544, 1832
MslI	CAYNNNNRTG	3 cut(s)	989, 1589, 1629
MspI	CCGG	8 cut(s)	24, 45, 130, 202, 213, 285, 347, 383
MspR9I	CCNGG	2 cut(s)	107, 368
MunI	CAATTG	1 cut(s)	444
Mva1269I	GAATGC	1 cut(s)	1985
MvaI	CCWGG	2 cut(s)	107, 368
MwoI	GCNNNNNNNGC	6 cut(s)	36, 184, 1445, 1694, 1973, 1982
NaeI	GCCGGC	2 cut(s)	286, 384
NcoI	CCATGG	1 cut(s)	1572
NgoMIV	GCCGGC	2 cut(s)	284, 382
NlaIII	CATG	7 cut(s)	583, 707, 803, 824, 1576, 1994, 2036
NlaIV	GGNNCC	7 cut(s)	90, 217, 351, 381, 387, 414, 2030
NmuCI	GTSAC	3 cut(s)	1339, 1678, 1791
NsiI	ATGCAT	2 cut(s)	1075, 1315
NspV	TTCGAA	1 cut(s)	945
OliI	CACNNNNGTG	2 cut(s)	989, 1589
PaeR7I	CTCGAG	1 cut(s)	1683
PaqCI	CACCTGC	1 cut(s)	1790
PciSI	GCTCTTC	2 cut(s)	168, 556
PcsI	WCGNNNNNNNCGW	2 cut(s)	72, 248
PctI	GAATGC	1 cut(s)	1985
PdiI	GCCGGC	2 cut(s)	286, 384
PdmI	GAANNNNTTC	1 cut(s)	505
PfeI	GAWTC	8 cut(s)	583, 638, 664, 766, 995, 1036, 1514, 1877
PflFI	GACNNNGTC	1 cut(s)	154
PkrI	GCNGC	4 cut(s)	301, 345, 1327, 1966
Ple19I	CGATCG	1 cut(s)	393
PleI	GAGTC	4 cut(s)	131, 1147, 1243, 1845
PpsI	GAGTC	4 cut(s)	131, 1147, 1243, 1845
Ppu21I	YACGTR	1 cut(s)	1591
Psp124BI	GAGCTC	1 cut(s)	317
Psp1406I	AACGTT	2 cut(s)	1422, 1467
Psp6I	CCWGG	2 cut(s)	105, 366
PspFI	CCCAGC	2 cut(s)	57, 825
PspGI	CCWGG	2 cut(s)	105, 366
PspN4I	GGNNCC	7 cut(s)	90, 217, 351, 381, 387, 414, 2030
PspPI	GGNCC	7 cut(s)	88, 103, 109, 132, 380, 413, 860
PspXI	VCTCGAGB	1 cut(s)	1683
PstI	CTGCAG	2 cut(s)	345, 1330
PsuI	RGATCY	1 cut(s)	1924
PsyI	GACNNNGTC	1 cut(s)	154
PvuI	CGATCG	1 cut(s)	393
RsaI	GTAC	5 cut(s)	278, 365, 688, 1862, 2030
RsaNI	GTAC	5 cut(s)	277, 364, 687, 1861, 2029
RseI	CAYNNNNRTG	3 cut(s)	989, 1589, 1629
SacI	GAGCTC	1 cut(s)	317
SapI	GCTCTTC	2 cut(s)	168, 556
SaqAI	TTAA	4 cut(s)	855, 1275, 1544, 1832
SatI	GCNGC	4 cut(s)	300, 344, 1326, 1965
Sau96I	GGNCC	7 cut(s)	88, 103, 109, 132, 380, 413, 860
ScaI	AGTACT	2 cut(s)	688, 1862
SchI	GAGTC	4 cut(s)	131, 1147, 1244, 1845
ScrFI	CCNGG	2 cut(s)	107, 368
SduI	GDGCHC	2 cut(s)	317, 909
SfaNI	GCATC	5 cut(s)	234, 856, 1032, 1300, 1717
SfcI	CTRYAG	2 cut(s)	341, 1326
Sfr274I	CTCGAG	1 cut(s)	1683
SfuI	TTCGAA	1 cut(s)	945
SinI	GGWCC	2 cut(s)	88, 413
SlaI	CTCGAG	1 cut(s)	1683
SmiMI	CAYNNNNRTG	3 cut(s)	989, 1589, 1629
SmlI	CTYRAG	1 cut(s)	1683
SmoI	CTYRAG	1 cut(s)	1683
Sse9I	AATT	9 cut(s)	444, 691, 948, 973, 1066, 1105, 1549, 1895, 2055
SsiI	CCGC	7 cut(s)	92, 185, 299, 963, 1250, 1474, 2009
SspI	AATATT	1 cut(s)	1836
SspMI	CTAG	2 cut(s)	438, 1736
SstI	GAGCTC	1 cut(s)	317
StyD4I	CCNGG	2 cut(s)	105, 366
StyI	CCWWGG	1 cut(s)	1572
TaaI	ACNGT	4 cut(s)	904, 1433, 1541, 2028
TaiI	ACGT	4 cut(s)	200, 1425, 1470, 1593
TaqII	GACCGA	1 cut(s)	2035
TasI	AATT	9 cut(s)	444, 691, 948, 973, 1066, 1105, 1549, 1895, 2055
TatI	WGTACW	2 cut(s)	686, 1860
TauI	GCSGC	1 cut(s)	302
TfiI	GAWTC	8 cut(s)	583, 638, 664, 766, 995, 1036, 1514, 1877
Tru1I	TTAA	4 cut(s)	855, 1275, 1544, 1832
Tru9I	TTAA	4 cut(s)	855, 1275, 1544, 1832
TscAI	CASTG	1 cut(s)	1737
TseFI	GTSAC	3 cut(s)	1339, 1678, 1791
TseI	GCWGC	3 cut(s)	343, 1325, 1964
Tsp45I	GTSAC	3 cut(s)	1339, 1678, 1791
TspDTI	ATGAA	8 cut(s)	563, 788, 966, 1409, 1545, 1887, 1891, 1899
TspGWI	ACGGA	6 cut(s)	64, 211, 600, 1001, 1779, 1870
TspRI	CASTG	1 cut(s)	1737
Tth111I	GACNNNGTC	1 cut(s)	154
VneI	GTGCAC	1 cut(s)	905
VpaK11BI	GGWCC	2 cut(s)	88, 413
XapI	RAATTY	2 cut(s)	973, 1549
XhoI	CTCGAG	1 cut(s)	1683
XmnI	GAANNNNTTC	1 cut(s)	505
XspI	CTAG	2 cut(s)	438, 1736
ZrmI	AGTACT	2 cut(s)	688, 1862
Zsp2I	ATGCAT	2 cut(s)	1075, 1315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.