Rh3AG130300

phosphatase 2C

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
11285033 .. 11285337
305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG130300.1

Sequence Viewer

Length: 305 bp
ATGAATCGGCGACACAAGTCGGCTGTGACGCCGAAAGAAATGGAGTCGGAGAAAATCAGCGAGGAGTTGAATCCGAGTAGTACTAACTTGAGCAGCCATGCGAGTTTGAGTGGAAATGAGAATGGGATTGGGGATTTCTCAATGGAAAGTCAGAATCTTCAGTGGGCTCAAGGGAAGGCGGGTGAGGATCGAGACGTGGTTTCTGATGAGCATGGTTGGGTGTTTGTGGGGATTTATGATGGGTTTAATGGCCCTGATGCTCCTAATTATTTGTTGTCGAATCTTTACTCTGCTGTGCATGAGGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

101

Amino Acids

11.11

Weight (kDa)

4.7

Isoelectric Point (pI)

31.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 179
AclWI GGATC 1 cut(s) 195
AcuI CTGAAG 1 cut(s) 143
AcyI GRCGYC 1 cut(s) 29
AfaI GTAC 1 cut(s) 82
AgsI TTSAA 1 cut(s) 70
AjiI CACGTC 1 cut(s) 196
Alw26I GTCTC 1 cut(s) 186
AlwI GGATC 1 cut(s) 195
AoxI GGCC 1 cut(s) 250
ApeKI GCWGC 1 cut(s) 93
AspS9I GGNCC 1 cut(s) 251
AsuHPI GGTGA 1 cut(s) 194
BanII GRGCYC 1 cut(s) 169
BbvI GCAGC 1 cut(s) 105
BccI CCATC 1 cut(s) 233
BcoDI GTCTC 1 cut(s) 186
BisI GCNGC 1 cut(s) 94
BlsI GCNGC 1 cut(s) 95
BmcAI AGTACT 1 cut(s) 82
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 1 cut(s) 251
BmsI GCATC 1 cut(s) 247
BoxI GACNNNNGTC 1 cut(s) 16
BpuEI CTTGAG 2 cut(s) 109, 153
BsaHI GRCGYC 1 cut(s) 29
BseRI GAGGAG 1 cut(s) 77
BseXI GCAGC 1 cut(s) 105
BshFI GGCC 1 cut(s) 252
BsmAI GTCTC 1 cut(s) 186
BsmBI CGTCTC 1 cut(s) 186
BsnI GGCC 1 cut(s) 252
Bsp1286I GDGCHC 1 cut(s) 169
Bsp143I GATC 1 cut(s) 187
BspACI CCGC 1 cut(s) 179
BspANI GGCC 1 cut(s) 252
BspPI GGATC 1 cut(s) 195
BssMI GATC 1 cut(s) 187
BssNI GRCGYC 1 cut(s) 29
BstACI GRCGYC 1 cut(s) 29
BstKTI GATC 1 cut(s) 190
BstMAI GTCTC 1 cut(s) 186
BstMBI GATC 1 cut(s) 187
BstPAI GACNNNNGTC 1 cut(s) 16
BstV1I GCAGC 1 cut(s) 105
BsuRI GGCC 1 cut(s) 252
BtrI CACGTC 1 cut(s) 196
BtsIMutI CAGTG 1 cut(s) 167
Cfr13I GGNCC 1 cut(s) 251
CseI GACGC 1 cut(s) 37
Csp6I GTAC 1 cut(s) 81
CviAII CATG 3 cut(s) 98, 212, 299
CviJI RGCY 4 cut(s) 23, 96, 167, 252
CviKI_1 RGCY 4 cut(s) 23, 96, 167, 252
CviQI GTAC 1 cut(s) 81
DpnI GATC 1 cut(s) 189
DpnII GATC 1 cut(s) 187
Eco24I GRGCYC 1 cut(s) 169
Eco57I CTGAAG 1 cut(s) 143
EcoT38I GRGCYC 1 cut(s) 169
Esp3I CGTCTC 1 cut(s) 186
FaeI CATG 3 cut(s) 101, 215, 302
FaiI YATR 4 cut(s) 99, 213, 237, 300
FatI CATG 3 cut(s) 97, 211, 298
FauI CCCGC 1 cut(s) 172
Fnu4HI GCNGC 1 cut(s) 94
FriOI GRGCYC 1 cut(s) 169
Fsp4HI GCNGC 1 cut(s) 94
GluI GCNGC 1 cut(s) 94
HaeIII GGCC 1 cut(s) 252
HgaI GACGC 1 cut(s) 37
Hin1I GRCGYC 1 cut(s) 29
Hin1II CATG 3 cut(s) 101, 215, 302
HinfI GANTC 5 cut(s) 4, 44, 70, 154, 280
HphI GGTGA 1 cut(s) 194
Hpy188I TCNGA 4 cut(s) 49, 75, 153, 205
Hpy188III TCNNGA 1 cut(s) 191
HpyAV CCTTC 1 cut(s) 169
HpyCH4IV ACGT 1 cut(s) 195
HpyCH4V TGCA 1 cut(s) 298
HpySE526I ACGT 1 cut(s) 195
Hsp92I GRCGYC 1 cut(s) 29
Hsp92II CATG 3 cut(s) 101, 215, 302
Kzo9I GATC 1 cut(s) 187
LmnI GCTCC 1 cut(s) 265
LpnPI CCDG 1 cut(s) 267
Lsp1109I GCAGC 1 cut(s) 105
LweI GCATC 1 cut(s) 247
MaeII ACGT 1 cut(s) 195
MaeIII GTNAC 1 cut(s) 25
MalI GATC 1 cut(s) 189
MboI GATC 1 cut(s) 187
MboII GAAGA 1 cut(s) 149
MhlI GDGCHC 1 cut(s) 169
MluCI AATT 1 cut(s) 265
MlyI GAGTC 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 27
MnlI CCTC 3 cut(s) 55, 178, 295
MseI TTAA 1 cut(s) 246
NdeII GATC 1 cut(s) 187
NlaIII CATG 3 cut(s) 101, 215, 302
NmuCI GTSAC 1 cut(s) 25
PfeI GAWTC 4 cut(s) 4, 70, 154, 280
PkrI GCNGC 1 cut(s) 95
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
PshAI GACNNNNGTC 1 cut(s) 16
PspPI GGNCC 1 cut(s) 251
RsaI GTAC 1 cut(s) 82
RsaNI GTAC 1 cut(s) 81
SaqAI TTAA 1 cut(s) 246
SatI GCNGC 1 cut(s) 94
Sau3AI GATC 1 cut(s) 187
Sau96I GGNCC 1 cut(s) 251
ScaI AGTACT 1 cut(s) 82
SchI GAGTC 1 cut(s) 53
SduI GDGCHC 1 cut(s) 169
SetI ASST 1 cut(s) 198
SfaNI GCATC 1 cut(s) 247
SmlI CTYRAG 2 cut(s) 88, 168
SmoI CTYRAG 2 cut(s) 88, 168
Sse9I AATT 1 cut(s) 265
SsiI CCGC 1 cut(s) 179
TaiI ACGT 1 cut(s) 198
TaqI TCGA 2 cut(s) 190, 278
TasI AATT 1 cut(s) 265
TatI WGTACW 1 cut(s) 80
TfiI GAWTC 4 cut(s) 4, 70, 154, 280
Tru1I TTAA 1 cut(s) 246
Tru9I TTAA 1 cut(s) 246
TscAI CASTG 1 cut(s) 167
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 1 cut(s) 93
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 167
ZrmI AGTACT 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.