Rmu_sc0008845.1_g000002

phosphatase 2C

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008845.1
Physical Location & Seq
Forward (+)
1874 .. 6560
4687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008845.1_g000002.1.cds

Sequence Viewer

Length: 957 bp
atgggcaacgccatcgcaaaggtctctcactgctgctctgtcgccggcgatgtctccaggcgccacgacgtcgacgtcgtctcccccgacgagggtctcggccactccttctactacattcgccgcccagaaatgatctcccccacgacctcgtttgaggcttcctctgaggagttccccaacccggctaccaccacgttccggtcaatctccggcgcctccgtcagcgccaacacgttcacgccgctctctactacactgtatgatctctaccccgacagctccggtgttctcgatcgtgctgctaggtttgagagctctacttcgttcgcttcgattcctctgcagccggttcctcggaacccgggacttccggggtccggtcctgctgaaagaggcttcttgtccggtccgatcgagcgggggttcatgtccggtccgattgacaggttggtgtgttcgggtccgattgagaagcagtccgagaagatggagagaagcctctcttttgggcttgagaaaaagcccaagagaaggaatttgatgaggatgataagaagagcgatttcgaagagtatgaatcggcggcacaagtcggctgtgacgccgaaagaaacggagtcggagaaaatcggcgaggagttgaatccgagtagtactaacttgagcagccatgcgagtttgagtggaaatgagaatgggattggggatttctcaatggaaagtcagaatcttcagtgggctcaagggaaggcgggggaggatcgagttcatgttgtggtttctgatgagcatgatatctttcgatacttaagatgtatgattgatatgggcttgttctatccctacaaagagatgatggattcggactcatcacacaccaggaacgccgccaacactggcgtgcgtctacttaccccatcccaaaacgacatgtgttttggaaggttttgctga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

318

Amino Acids

35.04

Weight (kDa)

6.72

Isoelectric Point (pI)

55.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 74
AatII GACGTC 2 cut(s) 72, 78
AccB1I GGYRCC 2 cut(s) 60, 215
AccBSI CCGCTC 2 cut(s) 247, 421
AccI GTMKAC 2 cut(s) 72, 910
AciI CCGC 6 cut(s) 124, 245, 421, 586, 755, 891
AclWI GGATC 1 cut(s) 771
AcoI YGGCCR 1 cut(s) 100
AcsI RAATTY 1 cut(s) 538
AcuI CTGAAG 1 cut(s) 719
AcyI GRCGYC 5 cut(s) 61, 69, 75, 216, 605
AfaI GTAC 1 cut(s) 658
AfiI CCNNNNNNNGG 6 cut(s) 91, 92, 184, 201, 380, 534
AflII CTTAAG 1 cut(s) 811
AflIII ACRYGT 2 cut(s) 234, 933
AgsI TTSAA 1 cut(s) 646
AjnI CCWGG 2 cut(s) 56, 881
AleI CACNNNNGTG 1 cut(s) 902
AluBI AGCT 2 cut(s) 282, 318
AluI AGCT 2 cut(s) 282, 318
Alw21I GWGCWC 1 cut(s) 320
Alw26I GTCTC 4 cut(s) 28, 58, 85, 101
AlwI GGATC 1 cut(s) 771
Ama87I CYCGRG 1 cut(s) 364
AoxI GGCC 1 cut(s) 100
ApeKI GCWGC 4 cut(s) 33, 302, 346, 669
ApoI RAATTY 1 cut(s) 538
ArsI GACNNNNNNTTYG 2 cut(s) 923, 955
AspLEI GCGC 3 cut(s) 63, 218, 230
AspS9I GGNCC 5 cut(s) 378, 383, 410, 437, 464
AsuC2I CCSGG 4 cut(s) 185, 365, 366, 375
AsuII TTCGAA 1 cut(s) 569
AvaI CYCGRG 1 cut(s) 364
AvaII GGWCC 5 cut(s) 378, 383, 410, 437, 464
BanI GGYRCC 2 cut(s) 60, 215
BanII GRGCYC 2 cut(s) 320, 745
Bbv12I GWGCWC 1 cut(s) 320
BbvI GCAGC 4 cut(s) 20, 289, 358, 681
BccI CCATC 4 cut(s) 20, 484, 853, 928
BcgI CGANNNNNNTGC 5 cut(s) 29, 284, 318, 325, 359
BciT130I CCWGG 2 cut(s) 58, 883
BcnI CCSGG 4 cut(s) 185, 365, 366, 375
BcoDI GTCTC 4 cut(s) 28, 58, 85, 101
BfaI CTAG 1 cut(s) 306
BfmI CTRYAG 1 cut(s) 344
BfoI RGCGCY 3 cut(s) 64, 219, 231
BfrI CTTAAG 1 cut(s) 811
BisI GCNGC 8 cut(s) 34, 124, 245, 303, 347, 587, 670, 891
BlsI GCNGC 8 cut(s) 35, 125, 246, 304, 348, 588, 671, 892
BmcAI AGTACT 1 cut(s) 658
Bme1390I CCNGG 6 cut(s) 58, 185, 365, 366, 375, 883
Bme18I GGWCC 5 cut(s) 378, 383, 410, 437, 464
BmeT110I CYCGRG 1 cut(s) 364
BmgT120I GGNCC 5 cut(s) 378, 383, 410, 437, 464
BmiI GGNNCC 6 cut(s) 62, 217, 354, 362, 379, 465
BmrFI CCNGG 6 cut(s) 58, 185, 365, 366, 375, 883
BoxI GACNNNNGTC 1 cut(s) 93
BplI GAGNNNNNCTC 2 cut(s) 149, 181
BpmI CTGGAG 1 cut(s) 40
Bpu14I TTCGAA 1 cut(s) 569
BpuEI CTTGAG 3 cut(s) 536, 685, 729
BpuMI CCSGG 4 cut(s) 185, 365, 366, 375
BsaHI GRCGYC 5 cut(s) 61, 69, 75, 216, 605
BsaI GGTCTC 2 cut(s) 28, 101
BsaJI CCNNGG 3 cut(s) 356, 364, 374
BsaWI WCCGGW 5 cut(s) 201, 284, 380, 407, 434
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 6 cut(s) 91, 92, 184, 201, 380, 534
Bse118I RCCGGY 2 cut(s) 44, 349
Bse1I ACTGG 1 cut(s) 904
BseBI CCWGG 2 cut(s) 58, 883
BseDI CCNNGG 3 cut(s) 356, 364, 374
BseGI GGATG 2 cut(s) 555, 920
BseLI CCNNNNNNNGG 6 cut(s) 91, 92, 184, 201, 380, 534
BseMII CTCAG 1 cut(s) 159
BseNI ACTGG 1 cut(s) 904
BseRI GAGGAG 2 cut(s) 185, 653
BseXI GCAGC 4 cut(s) 20, 289, 358, 681
Bsh1285I CGRYCG 2 cut(s) 298, 417
BshFI GGCC 1 cut(s) 102
BshNI GGYRCC 2 cut(s) 60, 215
BsiEI CGRYCG 2 cut(s) 298, 417
BsiHKAI GWGCWC 1 cut(s) 320
BsiHKCI CYCGRG 1 cut(s) 364
BslFI GGGAC 1 cut(s) 381
BslI CCNNNNNNNGG 6 cut(s) 91, 92, 184, 201, 380, 534
BsmAI GTCTC 4 cut(s) 28, 58, 85, 101
BsmBI CGTCTC 1 cut(s) 85
BsmFI GGGAC 1 cut(s) 381
BsnI GGCC 1 cut(s) 102
Bso31I GGTCTC 2 cut(s) 28, 101
BsoBI CYCGRG 1 cut(s) 364
Bsp119I TTCGAA 1 cut(s) 569
Bsp1286I GDGCHC 2 cut(s) 320, 745
Bsp143I GATC 5 cut(s) 135, 265, 295, 414, 763
BspACI CCGC 6 cut(s) 124, 245, 421, 586, 755, 891
BspANI GGCC 1 cut(s) 102
BspCNI CTCAG 1 cut(s) 160
BspLI GGNNCC 6 cut(s) 62, 217, 354, 362, 379, 465
BspMAI CTGCAG 1 cut(s) 348
BspPI GGATC 1 cut(s) 771
BspQI GCTCTTC 1 cut(s) 553
BspT104I TTCGAA 1 cut(s) 569
BspT107I GGYRCC 2 cut(s) 60, 215
BspTI CTTAAG 1 cut(s) 811
BspTNI GGTCTC 2 cut(s) 28, 101
BsrBI CCGCTC 2 cut(s) 247, 421
BsrFI RCCGGY 2 cut(s) 44, 349
BsrI ACTGG 1 cut(s) 904
BssAI RCCGGY 2 cut(s) 44, 349
BssECI CCNNGG 3 cut(s) 356, 364, 374
BssMI GATC 5 cut(s) 135, 265, 295, 414, 763
BssNI GRCGYC 5 cut(s) 61, 69, 75, 216, 605
Bst2UI CCWGG 2 cut(s) 58, 883
Bst4CI ACNGT 1 cut(s) 261
Bst6I CTCTTC 2 cut(s) 553, 566
BstACI GRCGYC 5 cut(s) 61, 69, 75, 216, 605
BstAFI CTTAAG 1 cut(s) 811
BstBI TTCGAA 1 cut(s) 569
BstC8I GCNNGC 2 cut(s) 46, 905
BstDEI CTNAG 1 cut(s) 168
BstF5I GGATG 2 cut(s) 555, 920
BstH2I RGCGCY 3 cut(s) 64, 219, 231
BstHHI GCGC 3 cut(s) 63, 218, 230
BstKTI GATC 5 cut(s) 138, 268, 298, 417, 766
BstMAI GTCTC 4 cut(s) 28, 58, 85, 101
BstMBI GATC 5 cut(s) 135, 265, 295, 414, 763
BstMCI CGRYCG 2 cut(s) 298, 417
BstNI CCWGG 2 cut(s) 58, 883
BstNSI RCATGY 1 cut(s) 937
BstPAI GACNNNNGTC 1 cut(s) 93
BstSCI CCNGG 6 cut(s) 56, 183, 363, 364, 373, 881
BstSFI CTRYAG 1 cut(s) 344
BstV1I GCAGC 4 cut(s) 20, 289, 358, 681
BsuRI GGCC 1 cut(s) 102
BtgZI GCGATG 1 cut(s) 63
BtsCI GGATG 2 cut(s) 555, 920
BtsI GCAGTG 1 cut(s) 28
BtsIMutI CAGTG 4 cut(s) 28, 257, 743, 897
Cac8I GCNNGC 2 cut(s) 46, 905
CfoI GCGC 3 cut(s) 63, 218, 230
Cfr10I RCCGGY 2 cut(s) 44, 349
Cfr13I GGNCC 5 cut(s) 378, 383, 410, 437, 464
Cfr9I CCCGGG 1 cut(s) 364
CpoI CGGWCCG 2 cut(s) 410, 437
CseI GACGC 2 cut(s) 613, 896
Csp6I GTAC 1 cut(s) 657
CspI CGGWCCG 2 cut(s) 410, 437
CviAII CATG 5 cut(s) 430, 674, 773, 794, 934
CviQI GTAC 1 cut(s) 657
DdeI CTNAG 1 cut(s) 168
DinI GGCGCC 2 cut(s) 62, 217
DpnI GATC 5 cut(s) 137, 267, 297, 416, 765
DpnII GATC 5 cut(s) 135, 265, 295, 414, 763
DrdI GACNNNNNNGTC 1 cut(s) 74
DseDI GACNNNNNNGTC 1 cut(s) 74
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 2 cut(s) 553, 566
EarI CTCTTC 2 cut(s) 553, 566
Ecl136II GAGCTC 1 cut(s) 318
Eco24I GRGCYC 2 cut(s) 320, 745
Eco31I GGTCTC 2 cut(s) 28, 101
Eco32I GATATC 1 cut(s) 799
Eco47I GGWCC 5 cut(s) 378, 383, 410, 437, 464
Eco53kI GAGCTC 1 cut(s) 318
Eco57I CTGAAG 1 cut(s) 719
Eco88I CYCGRG 1 cut(s) 364
EcoICRI GAGCTC 1 cut(s) 318
EcoRII CCWGG 2 cut(s) 56, 881
EcoRV GATATC 1 cut(s) 799
EcoT38I GRGCYC 2 cut(s) 320, 745
EgeI GGCGCC 2 cut(s) 62, 217
EheI GGCGCC 2 cut(s) 62, 217
Esp3I CGTCTC 1 cut(s) 85
FaeI CATG 5 cut(s) 433, 677, 776, 797, 937
FaiI YATR 9 cut(s) 264, 431, 578, 675, 774, 795, 821, 830, 935
FalI AAGNNNNNCTT 2 cut(s) 490, 522
FaqI GGGAC 1 cut(s) 381
FatI CATG 5 cut(s) 429, 673, 772, 793, 933
FauI CCCGC 2 cut(s) 414, 748
FblI GTMKAC 2 cut(s) 72, 910
Fnu4HI GCNGC 8 cut(s) 34, 124, 245, 303, 347, 587, 670, 891
FokI GGATG 2 cut(s) 562, 907
FriOI GRGCYC 2 cut(s) 320, 745
Fsp4HI GCNGC 8 cut(s) 34, 124, 245, 303, 347, 587, 670, 891
FspBI CTAG 1 cut(s) 306
GlaI GCGC 3 cut(s) 62, 217, 229
GluI GCNGC 8 cut(s) 34, 124, 245, 303, 347, 587, 670, 891
GsuI CTGGAG 1 cut(s) 40
HaeII RGCGCY 3 cut(s) 64, 219, 231
HaeIII GGCC 1 cut(s) 102
HgaI GACGC 2 cut(s) 613, 896
HhaI GCGC 3 cut(s) 63, 218, 230
Hin1I GRCGYC 5 cut(s) 61, 69, 75, 216, 605
Hin1II CATG 5 cut(s) 433, 677, 776, 797, 937
Hin6I GCGC 3 cut(s) 61, 216, 228
HinP1I GCGC 3 cut(s) 61, 216, 228
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HinfI GANTC 7 cut(s) 337, 580, 620, 646, 730, 863, 869
Hpy166II GTNNAC 3 cut(s) 73, 240, 911
Hpy188III TCNNGA 1 cut(s) 293
Hpy8I GTNNAC 3 cut(s) 73, 240, 911
Hpy99I CGWCG 5 cut(s) 71, 74, 77, 80, 92
HpyAV CCTTC 4 cut(s) 118, 528, 745, 939
HpyCH4III ACNGT 1 cut(s) 261
HpyCH4IV ACGT 4 cut(s) 69, 75, 197, 236
HpyCH4V TGCA 1 cut(s) 346
HpyF3I CTNAG 1 cut(s) 168
HpySE526I ACGT 4 cut(s) 69, 75, 197, 236
Hsp92I GRCGYC 5 cut(s) 61, 69, 75, 216, 605
Hsp92II CATG 5 cut(s) 433, 677, 776, 797, 937
HspAI GCGC 3 cut(s) 61, 216, 228
KasI GGCGCC 2 cut(s) 60, 215
KroI GCCGGC 1 cut(s) 44
KroNI GCCGGC 1 cut(s) 46
Kzo9I GATC 5 cut(s) 135, 265, 295, 414, 763
LguI GCTCTTC 1 cut(s) 553
LmnI GCTCC 1 cut(s) 287
Lsp1109I GCAGC 4 cut(s) 20, 289, 358, 681
MaeI CTAG 1 cut(s) 306
MaeII ACGT 4 cut(s) 69, 75, 197, 236
MaeIII GTNAC 1 cut(s) 601
MalI GATC 5 cut(s) 137, 267, 297, 416, 765
MbiI CCGCTC 2 cut(s) 247, 421
MboI GATC 5 cut(s) 135, 265, 295, 414, 763
MboII GAAGA 4 cut(s) 499, 570, 583, 725
MhlI GDGCHC 2 cut(s) 320, 745
MluCI AATT 1 cut(s) 538
Mly113I GGCGCC 2 cut(s) 61, 216
MlyI GAGTC 2 cut(s) 629, 863
MmeI TCCRAC 1 cut(s) 603
MreI CGCCGGCG 1 cut(s) 44
MroNI GCCGGC 1 cut(s) 44
MseI TTAA 1 cut(s) 812
MslI CAYNNNNRTG 1 cut(s) 902
MspCI CTTAAG 1 cut(s) 811
MspR9I CCNGG 6 cut(s) 58, 185, 365, 366, 375, 883
MvaI CCWGG 2 cut(s) 58, 883
NaeI GCCGGC 1 cut(s) 46
NarI GGCGCC 2 cut(s) 61, 216
NciI CCSGG 4 cut(s) 185, 365, 366, 375
NdeII GATC 5 cut(s) 135, 265, 295, 414, 763
NgoMIV GCCGGC 1 cut(s) 44
NlaIII CATG 5 cut(s) 433, 677, 776, 797, 937
NlaIV GGNNCC 6 cut(s) 62, 217, 354, 362, 379, 465
NmeAIII GCCGAG 1 cut(s) 78
NmuCI GTSAC 1 cut(s) 601
NspI RCATGY 1 cut(s) 937
NspV TTCGAA 1 cut(s) 569
OliI CACNNNNGTG 1 cut(s) 902
PciI ACATGT 1 cut(s) 933
PciSI GCTCTTC 1 cut(s) 553
PcsI WCGNNNNNNNCGW 4 cut(s) 72, 75, 84, 332
PdiI GCCGGC 1 cut(s) 46
PfeI GAWTC 5 cut(s) 337, 580, 646, 730, 863
PflFI GACNNNGTC 1 cut(s) 77
PkrI GCNGC 8 cut(s) 35, 125, 246, 304, 348, 588, 671, 892
Ple19I CGATCG 2 cut(s) 298, 417
PleI GAGTC 2 cut(s) 628, 863
PluTI GGCGCC 2 cut(s) 64, 219
PpsI GAGTC 2 cut(s) 628, 863
PscI ACATGT 1 cut(s) 933
PshAI GACNNNNGTC 1 cut(s) 93
Psp124BI GAGCTC 1 cut(s) 320
Psp6I CCWGG 2 cut(s) 56, 881
PspGI CCWGG 2 cut(s) 56, 881
PspN4I GGNNCC 6 cut(s) 62, 217, 354, 362, 379, 465
PspPI GGNCC 5 cut(s) 378, 383, 410, 437, 464
PstI CTGCAG 1 cut(s) 348
PsyI GACNNNGTC 1 cut(s) 77
PvuI CGATCG 2 cut(s) 298, 417
RsaI GTAC 1 cut(s) 658
RsaNI GTAC 1 cut(s) 657
RseI CAYNNNNRTG 1 cut(s) 902
Rsr2I CGGWCCG 2 cut(s) 410, 437
RsrII CGGWCCG 2 cut(s) 410, 437
SacI GAGCTC 1 cut(s) 320
SalI GTCGAC 1 cut(s) 71
SapI GCTCTTC 1 cut(s) 553
SaqAI TTAA 1 cut(s) 812
SatI GCNGC 8 cut(s) 34, 124, 245, 303, 347, 587, 670, 891
Sau3AI GATC 5 cut(s) 135, 265, 295, 414, 763
Sau96I GGNCC 5 cut(s) 378, 383, 410, 437, 464
ScaI AGTACT 1 cut(s) 658
SchI GAGTC 2 cut(s) 629, 863
ScrFI CCNGG 6 cut(s) 58, 185, 365, 366, 375, 883
SduI GDGCHC 2 cut(s) 320, 745
SfcI CTRYAG 1 cut(s) 344
SfoI GGCGCC 2 cut(s) 62, 217
SfuI TTCGAA 1 cut(s) 569
SgrAI CRCCGGYG 1 cut(s) 44
SgrDI CGTCGACG 1 cut(s) 71
SinI GGWCC 5 cut(s) 378, 383, 410, 437, 464
SmaI CCCGGG 1 cut(s) 366
SmiMI CAYNNNNRTG 1 cut(s) 902
SmlI CTYRAG 4 cut(s) 515, 664, 744, 811
SmoI CTYRAG 4 cut(s) 515, 664, 744, 811
Sse9I AATT 1 cut(s) 538
SsiI CCGC 6 cut(s) 124, 245, 421, 586, 755, 891
SspDI GGCGCC 2 cut(s) 60, 215
SspMI CTAG 1 cut(s) 306
SstI GAGCTC 1 cut(s) 320
StyD4I CCNGG 6 cut(s) 56, 183, 363, 364, 373, 881
TaaI ACNGT 1 cut(s) 261
TaiI ACGT 4 cut(s) 72, 78, 200, 239
TaqI TCGA 7 cut(s) 72, 294, 335, 417, 569, 766, 805
TasI AATT 1 cut(s) 538
TatI WGTACW 1 cut(s) 656
TauI GCSGC 4 cut(s) 126, 247, 589, 893
TfiI GAWTC 5 cut(s) 337, 580, 646, 730, 863
Tru1I TTAA 1 cut(s) 812
Tru9I TTAA 1 cut(s) 812
TscAI CASTG 4 cut(s) 35, 264, 743, 904
TseFI GTSAC 1 cut(s) 601
TseI GCWGC 4 cut(s) 33, 302, 346, 669
Tsp45I GTSAC 1 cut(s) 601
TspDTI ATGAA 3 cut(s) 418, 593, 761
TspGWI ACGGA 2 cut(s) 211, 632
TspMI CCCGGG 1 cut(s) 364
TspRI CASTG 4 cut(s) 35, 264, 743, 904
Tth111I GACNNNGTC 1 cut(s) 77
Vha464I CTTAAG 1 cut(s) 811
VpaK11BI GGWCC 5 cut(s) 378, 383, 410, 437, 464
XapI RAATTY 1 cut(s) 538
XceI RCATGY 1 cut(s) 937
XmaI CCCGGG 1 cut(s) 364
XmiI GTMKAC 2 cut(s) 72, 910
XspI CTAG 1 cut(s) 306
ZraI GACGTC 2 cut(s) 70, 76
ZrmI AGTACT 1 cut(s) 658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.