Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0002788

Physical Location & Seq

Genomic Coordinates Forward (+)

25367170 .. 25372034

Gene Structure 4865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g24820.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGACATTTTGCTTTACACGCGTGGAGAATCTAAAAATCTCATATTTAGGCATGAATATGCCGGCGACCCACTTCGGCGTCAAGTACGCCGTACACATCATCACCTCCCACTTCGGCAATCTTGTCGCTAATGTGTGTGAAAATCTTCTGAAACGAGGACCCCTAACACTGAGACTCCTAATTGGGTTCACGGAGCTCACCCCTCAGCAAGTCAAGAACTCCCTCCTCATCCTAATCCAGCACAATTGCGTTCAGCCCTTCTCCGTCGACCAAGCAGAGGGCCCGAAAGTCACTCAGTATGTAGCGCTGTTCGATAACATACTCCATCGATGGAGGTTTGCCAAATTCATGACGGTTGTTTCCCAGGAATTCGATAAAGAGTGTGAACTAATTATTAAGGATTTGCTTGAGAATGGTAGGCTTACACTAAAACAAATAACTGAAGGAGAATATGCAGTTAAGGATACTGTTGAGAAAAGCTTTCTTAAACTTGTGAACGCTCATTTTGTGGAACGCTGCCCTGCTCCTGAAGCAGTTCTTGAAGAAGCAAGTAAAGATGCTCCAAAGAAGCGAGGTCCTAAGTCTTCCAAGATTGTTGAAGTACCAGAGACTATAGAACAACGTGTTGTAGCAGCAGCAGCACCTTCAGCAGCTATGAGATTTTCAATCCTGACTGATTCTGAAACCGATGTTCATGGGGGTAGTTCTTCTAGTATGAGTACTGGGGACAAGCGAAAGCATGATGCTTTGGAGTTGGATGAAGAATTTGCTAATAATGAAGTGGTTATTTGGCGTGCTAATTTTGAGGAATTCATTCGCTGCCTAAGGCACAAGACTTGCGTCGAGAATGTTAGAGCACGTCTGGATGACGGAGCTGCACTTGTCTTAAGAGCAATGCTTAAGTCAACTAGAACTGCAGAGAAGAAAGTAAAGATGGAAAATTCAGTTCCTGTATCATTCAGTACTATTTATGAGGAGGTGATAAACAGTGAAGCTGGTCGTAATTTGACATGTGATCGCGTCAAAGCTTCCCTCAGCCTGTTGTGCGATGAAAGAGATGTAGATGAGGATGAGTCCTATAGTGTTGACTTGAAGAAAATTCTGGAGCTGGCTCAGAATGATGAGGTGGAGTCAATTGTTTTGAAAAGATATGGGAGAGATGCTTATAAAATGTTTAGGCTACTGTCGACTTCAAGTCGTGCACTTGAGACGGATAAGATTTCAGATATGACACTTGTTGAAAAGAAGGAAACTCCCACAATTCTCTATAAGCTGTGGAAGGATGAGTACTTGCTTATGGAGAGATTAGCTGTGACGGGAGCCAGACAGGCACAGTTCTTGGTGTGGAAGGTAGACAGGCCCATTGTTTGGAAACATGTTTTAGATGAGATGTTCCACGCAGCGCTGAATCTGAGTCTTCGACTGGCATACGAGGACGAACAGATTAAAGAGGTACAACTTCTCCCAGCGCACAAGCGAACGGGGCCATTGGGGAAACAATGGCAAAGATTTAGAAATGTGGTTTATGTTATGCACGCATCCCAATTGAAGATTGATGATGCTATCATGCTCTTCCATGACTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko04623 ko05169 map00230 map00240 map01100 map03020 map04623 map05169

Pfam Domains

Protein Families

HTH_9 RNA_pol_Rpc82

Protein Analysis

529

Amino Acids

60.33

Weight (kDa)

6.43

Isoelectric Point (pI)

36.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49000
fragaria_vesca	FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570
malus_domestica	MD01G1202100.v1.1 MD07G1271200.v1.1 MD07G1271300.v1.1
prunus_persica	Prupe.2G295500_v2.0.a1
pyrus_communis	pycom01g21170 pycom07g24820 pycom16g25350
rosa_chinensis	RchiOBHm_Chr1g0377571 RchiOBHm_Chr6g0258831
rosa_laevigata	RLG00000014582 RLG00000026516
rosa_multiflora	Rmu_co8176084.1_g000001 Rmu_sc0002832.1_g000008 Rmu_sc0005290.1_g000010 Rmu_sc0012587.1_g000006 Rmu_sc0041364.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281230 Rroxscaffold_7G00206100
rosa_rugosa	Rorug01G0403500 Rorug01G0403500 Rorug05G0583700
rosa_samantha	Rh1AG429300 Rh1BG380000 Rh1CG394200 Rh1DG411200 Rh6AG100200 Rh6BG091700 Rh6CG089200 Rh6DG083500
rosa_wichuraiana	Rw1G036950 Rw6G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1167
AccB7I	CCANNNNNTGG	1 cut(s)	1368
AccI	GTMKAC	3 cut(s)	267, 1187, 1353
AccII	CGCG	2 cut(s)	21, 1020
AcsI	RAATTY	6 cut(s)	344, 368, 764, 809, 940, 1098
AcuI	CTGAAG	3 cut(s)	462, 549, 630
AcyI	GRCGYC	1 cut(s)	78
AfaI	GTAC	7 cut(s)	86, 93, 603, 721, 964, 1289, 1455
AfeI	AGCGCT	2 cut(s)	306, 1404
AfiI	CCNNNNNNNGG	2 cut(s)	277, 1368
AflII	CTTAAG	2 cut(s)	886, 899
AflIII	ACRYGT	4 cut(s)	19, 622, 1010, 1375
AgsI	TTSAA	8 cut(s)	542, 599, 666, 1093, 1144, 1194, 1241, 1549
AhdI	GACNNNNNGTC	1 cut(s)	1194
AjiI	CACGTC	1 cut(s)	860
AjnI	CCWGG	1 cut(s)	363
AluBI	AGCT	9 cut(s)	196, 480, 653, 875, 995, 1028, 1108, 1273, 1310
AluI	AGCT	9 cut(s)	196, 480, 653, 875, 995, 1028, 1108, 1273, 1310
Alw21I	GWGCWC	3 cut(s)	198, 859, 1204
Alw26I	GTCTC	3 cut(s)	166, 602, 1202
Alw44I	GTGCAC	1 cut(s)	1200
AlwNI	CAGNNNCTG	1 cut(s)	950
Aor51HI	AGCGCT	2 cut(s)	306, 1404
AoxI	GGCC	3 cut(s)	280, 1358, 1484
ApaI	GGGCCC	1 cut(s)	284
ApaLI	GTGCAC	1 cut(s)	1200
ApeKI	GCWGC	8 cut(s)	516, 632, 635, 638, 650, 819, 875, 1400
ApoI	RAATTY	6 cut(s)	344, 368, 764, 809, 940, 1098
Asp700I	GAANNNNTTC	3 cut(s)	144, 534, 813
AspLEI	GCGC	3 cut(s)	307, 1405, 1471
AspS9I	GGNCC	6 cut(s)	158, 280, 281, 575, 1359, 1484
AsuHPI	GGTGA	3 cut(s)	94, 190, 991
AvaII	GGWCC	2 cut(s)	158, 575
AxyI	CCTNAGG	1 cut(s)	824
BaeGI	GKGCMC	2 cut(s)	284, 1204
BanII	GRGCYC	2 cut(s)	198, 284
BarI	GAAGNNNNNNTAC	2 cut(s)	1271, 1303
BbsI	GAAGAC	2 cut(s)	576, 1409
Bbv12I	GWGCWC	3 cut(s)	198, 859, 1204
BbvCI	CCTCAGC	2 cut(s)	204, 1034
BbvI	GCAGC	8 cut(s)	503, 644, 647, 650, 662, 806, 862, 1412
BccI	CCATC	3 cut(s)	324, 333, 928
BceAI	ACGGC	1 cut(s)	74
BcgI	CGANNNNNNTGC	2 cut(s)	106, 140
BciT130I	CCWGG	1 cut(s)	365
BciVI	GTATCC	1 cut(s)	457
BcoDI	GTCTC	3 cut(s)	166, 602, 1202
BfaI	CTAG	2 cut(s)	711, 909
BfmI	CTRYAG	3 cut(s)	612, 915, 1078
BfoI	RGCGCY	2 cut(s)	308, 1406
BfrI	CTTAAG	2 cut(s)	886, 899
BfuI	GTATCC	1 cut(s)	457
BglI	GCCNNNNNGGC	1 cut(s)	1328
BisI	GCNGC	8 cut(s)	517, 633, 636, 639, 651, 820, 876, 1401
BlsI	GCNGC	8 cut(s)	518, 634, 637, 640, 652, 821, 877, 1402
BmcAI	AGTACT	3 cut(s)	721, 964, 1289
Bme1390I	CCNGG	1 cut(s)	365
Bme18I	GGWCC	2 cut(s)	158, 575
BmeRI	GACNNNNNGTC	1 cut(s)	1194
BmgBI	CACGTC	1 cut(s)	860
BmgT120I	GGNCC	6 cut(s)	158, 280, 281, 575, 1359, 1484
BmiI	GGNNCC	4 cut(s)	160, 282, 1321, 1485
BmrFI	CCNGG	1 cut(s)	365
BmrI	ACTGGG	1 cut(s)	732
BmsI	GCATC	5 cut(s)	547, 733, 1150, 1547, 1549
BmuI	ACTGGG	1 cut(s)	732
BoxI	GACNNNNGTC	1 cut(s)	839
BpiI	GAAGAC	2 cut(s)	576, 1409
BpmI	CTGGAG	1 cut(s)	1124
Bpu10I	CCTNAGC	2 cut(s)	204, 1034
BpuEI	CTTGAG	2 cut(s)	428, 1226
Bsa29I	ATCGAT	1 cut(s)	328
BsaHI	GRCGYC	1 cut(s)	78
BsaJI	CCNNGG	1 cut(s)	363
BsaXI	ACNNNNNCTCC	4 cut(s)	159, 189, 1446, 1476
Bsc4I	CCNNNNNNNGG	2 cut(s)	277, 1368
Bse118I	RCCGGY	1 cut(s)	61
Bse1I	ACTGG	2 cut(s)	727, 1428
Bse21I	CCTNAGG	1 cut(s)	824
Bse3DI	GCAATG	1 cut(s)	900
BseBI	CCWGG	1 cut(s)	365
BseCI	ATCGAT	1 cut(s)	328
BseDI	CCNNGG	1 cut(s)	363
BseGI	GGATG	6 cut(s)	228, 763, 871, 1075, 1288, 1538
BseLI	CCNNNNNNNGG	2 cut(s)	277, 1368
BseMI	GCAATG	1 cut(s)	900
BseMII	CTCAG	6 cut(s)	161, 218, 308, 1048, 1127, 1403
BseNI	ACTGG	2 cut(s)	727, 1428
BseRI	GAGGAG	2 cut(s)	215, 989
BseSI	GKGCMC	2 cut(s)	284, 1204
BseXI	GCAGC	8 cut(s)	503, 644, 647, 650, 662, 806, 862, 1412
BseYI	CCCAGC	1 cut(s)	1465
BsgI	GTGCAG	1 cut(s)	861
Bsh1236I	CGCG	2 cut(s)	21, 1020
BshFI	GGCC	3 cut(s)	282, 1360, 1486
BshVI	ATCGAT	1 cut(s)	328
BsiHKAI	GWGCWC	3 cut(s)	198, 859, 1204
BsiSI	CCGG	1 cut(s)	62
BslFI	GGGAC	1 cut(s)	740
BslI	CCNNNNNNNGG	2 cut(s)	277, 1368
BsmAI	GTCTC	3 cut(s)	166, 602, 1202
BsmBI	CGTCTC	1 cut(s)	1202
BsmFI	GGGAC	1 cut(s)	740
BsnI	GGCC	3 cut(s)	282, 1360, 1486
Bsp120I	GGGCCC	1 cut(s)	280
Bsp1286I	GDGCHC	4 cut(s)	198, 284, 859, 1204
Bsp143I	GATC	1 cut(s)	1015
BspANI	GGCC	3 cut(s)	282, 1360, 1486
BspCNI	CTCAG	6 cut(s)	162, 217, 307, 1047, 1126, 1404
BspDI	ATCGAT	1 cut(s)	328
BspFNI	CGCG	2 cut(s)	21, 1020
BspHI	TCATGA	1 cut(s)	348
BspLI	GGNNCC	4 cut(s)	160, 282, 1321, 1485
BspMAI	CTGCAG	1 cut(s)	919
BspQI	GCTCTTC	1 cut(s)	1577
BspTI	CTTAAG	2 cut(s)	886, 899
BsrDI	GCAATG	1 cut(s)	900
BsrFI	RCCGGY	1 cut(s)	61
BsrI	ACTGG	2 cut(s)	727, 1428
BssAI	RCCGGY	1 cut(s)	61
BssECI	CCNNGG	1 cut(s)	363
BssMI	GATC	1 cut(s)	1015
BssNI	GRCGYC	1 cut(s)	78
Bst2UI	CCWGG	1 cut(s)	365
Bst4CI	ACNGT	5 cut(s)	355, 469, 989, 1185, 1335
Bst6I	CTCTTC	1 cut(s)	1577
BstACI	GRCGYC	1 cut(s)	78
BstAFI	CTTAAG	2 cut(s)	886, 899
BstC8I	GCNNGC	4 cut(s)	63, 795, 1110, 1536
BstDEI	CTNAG	8 cut(s)	170, 204, 294, 579, 824, 1034, 1113, 1412
BstF5I	GGATG	6 cut(s)	228, 763, 871, 1075, 1288, 1538
BstFNI	CGCG	2 cut(s)	21, 1020
BstH2I	RGCGCY	2 cut(s)	308, 1406
BstHHI	GCGC	3 cut(s)	307, 1405, 1471
BstKTI	GATC	1 cut(s)	1018
BstMAI	GTCTC	3 cut(s)	166, 602, 1202
BstMBI	GATC	1 cut(s)	1015
BstMWI	GCNNNNNNNGC	7 cut(s)	18, 530, 638, 647, 1044, 1328, 1483
BstNI	CCWGG	1 cut(s)	365
BstNSI	RCATGY	2 cut(s)	1014, 1379
BstPAI	GACNNNNGTC	1 cut(s)	839
BstSCI	CCNGG	1 cut(s)	363
BstSFI	CTRYAG	3 cut(s)	612, 915, 1078
BstSLI	GKGCMC	2 cut(s)	284, 1204
BstUI	CGCG	2 cut(s)	21, 1020
BstV1I	GCAGC	8 cut(s)	503, 644, 647, 650, 662, 806, 862, 1412
BstV2I	GAAGAC	2 cut(s)	576, 1409
Bsu15I	ATCGAT	1 cut(s)	328
Bsu36I	CCTNAGG	1 cut(s)	824
BsuI	GTATCC	1 cut(s)	457
BsuRI	GGCC	3 cut(s)	282, 1360, 1486
BsuTUI	ATCGAT	1 cut(s)	328
BtgZI	GCGATG	1 cut(s)	1062
BtrI	CACGTC	1 cut(s)	860
BtsCI	GGATG	6 cut(s)	228, 763, 871, 1075, 1288, 1538
BtsIMutI	CAGTG	2 cut(s)	167, 994
Cac8I	GCNNGC	4 cut(s)	63, 795, 1110, 1536
CaiI	CAGNNNCTG	1 cut(s)	950
CciI	TCATGA	1 cut(s)	348
CfoI	GCGC	3 cut(s)	307, 1405, 1471
Cfr10I	RCCGGY	1 cut(s)	61
Cfr13I	GGNCC	6 cut(s)	158, 280, 281, 575, 1359, 1484
ClaI	ATCGAT	1 cut(s)	328
CseI	GACGC	3 cut(s)	67, 829, 1009
Csp6I	GTAC	7 cut(s)	85, 92, 602, 720, 963, 1288, 1454
CviAII	CATG	8 cut(s)	52, 349, 695, 740, 1011, 1376, 1567, 1577
CviQI	GTAC	7 cut(s)	85, 92, 602, 720, 963, 1288, 1454
DdeI	CTNAG	8 cut(s)	170, 204, 294, 579, 824, 1034, 1113, 1412
DpnI	GATC	1 cut(s)	1017
DpnII	GATC	1 cut(s)	1015
DriI	GACNNNNNGTC	1 cut(s)	1194
Eam1104I	CTCTTC	1 cut(s)	1577
Eam1105I	GACNNNNNGTC	1 cut(s)	1194
EarI	CTCTTC	1 cut(s)	1577
Ecl136II	GAGCTC	1 cut(s)	196
Eco24I	GRGCYC	2 cut(s)	198, 284
Eco47I	GGWCC	2 cut(s)	158, 575
Eco47III	AGCGCT	2 cut(s)	306, 1404
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	3 cut(s)	462, 549, 630
Eco81I	CCTNAGG	1 cut(s)	824
EcoICRI	GAGCTC	1 cut(s)	196
EcoO109I	RGGNCCY	3 cut(s)	158, 280, 575
EcoRI	GAATTC	2 cut(s)	368, 809
EcoRII	CCWGG	1 cut(s)	363
EcoT38I	GRGCYC	2 cut(s)	198, 284
Esp3I	CGTCTC	1 cut(s)	1202
FaeI	CATG	8 cut(s)	55, 352, 698, 743, 1014, 1379, 1570, 1580
FalI	AAGNNNNNCTT	2 cut(s)	522, 554
FaqI	GGGAC	1 cut(s)	740
FatI	CATG	8 cut(s)	51, 348, 694, 739, 1010, 1375, 1566, 1576
FblI	GTMKAC	3 cut(s)	267, 1187, 1353
Fnu4HI	GCNGC	8 cut(s)	517, 633, 636, 639, 651, 820, 876, 1401
FokI	GGATG	6 cut(s)	215, 770, 878, 1082, 1295, 1525
FriOI	GRGCYC	2 cut(s)	198, 284
Fsp4HI	GCNGC	8 cut(s)	517, 633, 636, 639, 651, 820, 876, 1401
FspBI	CTAG	2 cut(s)	711, 909
GlaI	GCGC	3 cut(s)	306, 1404, 1470
GluI	GCNGC	8 cut(s)	517, 633, 636, 639, 651, 820, 876, 1401
GsaI	CCCAGC	1 cut(s)	1469
GsuI	CTGGAG	1 cut(s)	1124
HaeII	RGCGCY	2 cut(s)	308, 1406
HaeIII	GGCC	3 cut(s)	282, 1360, 1486
HapII	CCGG	1 cut(s)	62
HgaI	GACGC	3 cut(s)	67, 829, 1009
HhaI	GCGC	3 cut(s)	307, 1405, 1471
Hin1I	GRCGYC	1 cut(s)	78
Hin1II	CATG	8 cut(s)	55, 352, 698, 743, 1014, 1379, 1570, 1580
Hin6I	GCGC	3 cut(s)	305, 1403, 1469
HinP1I	GCGC	3 cut(s)	305, 1403, 1469
HincII	GTYRAC	4 cut(s)	268, 906, 1087, 1188
HindII	GTYRAC	4 cut(s)	268, 906, 1087, 1188
HindIII	AAGCTT	2 cut(s)	478, 1026
HinfI	GANTC	7 cut(s)	28, 174, 677, 1073, 1130, 1408, 1414
HpaII	CCGG	1 cut(s)	62
HphI	GGTGA	3 cut(s)	94, 190, 991
Hpy188I	TCNGA	6 cut(s)	150, 682, 1116, 1225, 1413, 1586
Hpy188III	TCNNGA	8 cut(s)	214, 349, 527, 539, 670, 844, 863, 1103
Hpy99I	CGWCG	2 cut(s)	269, 845
HpyAV	CCTTC	6 cut(s)	268, 437, 654, 1240, 1273, 1342
HpyCH4III	ACNGT	5 cut(s)	355, 469, 989, 1185, 1335
HpyCH4IV	ACGT	2 cut(s)	622, 859
HpyCH4V	TGCA	5 cut(s)	455, 878, 917, 1202, 1534
HpyF10VI	GCNNNNNNNGC	7 cut(s)	18, 530, 638, 647, 1044, 1328, 1483
HpyF3I	CTNAG	8 cut(s)	170, 204, 294, 579, 824, 1034, 1113, 1412
HpySE526I	ACGT	2 cut(s)	622, 859
Hsp92I	GRCGYC	1 cut(s)	78
Hsp92II	CATG	8 cut(s)	55, 352, 698, 743, 1014, 1379, 1570, 1580
HspAI	GCGC	3 cut(s)	305, 1403, 1469
KroI	GCCGGC	1 cut(s)	61
KroNI	GCCGGC	1 cut(s)	63
Kzo9I	GATC	1 cut(s)	1015
LguI	GCTCTTC	1 cut(s)	1577
LmnI	GCTCC	6 cut(s)	193, 529, 565, 872, 1105, 1319
Lsp1109I	GCAGC	8 cut(s)	503, 644, 647, 650, 662, 806, 862, 1412
LweI	GCATC	5 cut(s)	547, 733, 1150, 1547, 1549
MaeI	CTAG	2 cut(s)	711, 909
MaeII	ACGT	2 cut(s)	622, 859
MaeIII	GTNAC	2 cut(s)	289, 1312
MalI	GATC	1 cut(s)	1017
MboI	GATC	1 cut(s)	1015
MfeI	CAATTG	3 cut(s)	244, 1134, 1544
MhlI	GDGCHC	4 cut(s)	198, 284, 859, 1204
MluI	ACGCGT	1 cut(s)	19
MlyI	GAGTC	4 cut(s)	168, 1082, 1139, 1423
MmeI	TCCRAC	1 cut(s)	735
MroNI	GCCGGC	1 cut(s)	61
MroXI	GAANNNNTTC	3 cut(s)	144, 534, 813
MseI	TTAA	6 cut(s)	396, 459, 486, 887, 900, 1446
MslI	CAYNNNNRTG	1 cut(s)	56
MspCI	CTTAAG	2 cut(s)	886, 899
MspI	CCGG	1 cut(s)	62
MspR9I	CCNGG	1 cut(s)	365
MunI	CAATTG	3 cut(s)	244, 1134, 1544
MvaI	CCWGG	1 cut(s)	365
MvnI	CGCG	2 cut(s)	21, 1020
MwoI	GCNNNNNNNGC	7 cut(s)	18, 530, 638, 647, 1044, 1328, 1483
NaeI	GCCGGC	1 cut(s)	63
NdeII	GATC	1 cut(s)	1015
NgoMIV	GCCGGC	1 cut(s)	61
NlaIII	CATG	8 cut(s)	55, 352, 698, 743, 1014, 1379, 1570, 1580
NlaIV	GGNNCC	4 cut(s)	160, 282, 1321, 1485
NmuCI	GTSAC	2 cut(s)	289, 1312
NspI	RCATGY	2 cut(s)	1014, 1379
PagI	TCATGA	1 cut(s)	348
PciI	ACATGT	2 cut(s)	1010, 1375
PciSI	GCTCTTC	1 cut(s)	1577
PdiI	GCCGGC	1 cut(s)	63
PdmI	GAANNNNTTC	3 cut(s)	144, 534, 813
PfeI	GAWTC	3 cut(s)	28, 677, 1408
PflMI	CCANNNNNTGG	1 cut(s)	1368
PkrI	GCNGC	8 cut(s)	518, 634, 637, 640, 652, 821, 877, 1402
PleI	GAGTC	4 cut(s)	168, 1081, 1138, 1422
PpsI	GAGTC	4 cut(s)	168, 1081, 1138, 1422
PpuMI	RGGWCCY	2 cut(s)	158, 575
PscI	ACATGT	2 cut(s)	1010, 1375
PshAI	GACNNNNGTC	1 cut(s)	839
PsiI	TTATAA	1 cut(s)	1167
Psp124BI	GAGCTC	1 cut(s)	198
Psp5II	RGGWCCY	2 cut(s)	158, 575
Psp6I	CCWGG	1 cut(s)	363
PspFI	CCCAGC	1 cut(s)	1465
PspGI	CCWGG	1 cut(s)	363
PspN4I	GGNNCC	4 cut(s)	160, 282, 1321, 1485
PspOMI	GGGCCC	1 cut(s)	280
PspPI	GGNCC	6 cut(s)	158, 280, 281, 575, 1359, 1484
PspPPI	RGGWCCY	2 cut(s)	158, 575
PstI	CTGCAG	1 cut(s)	919
PstNI	CAGNNNCTG	1 cut(s)	950
RsaI	GTAC	7 cut(s)	86, 93, 603, 721, 964, 1289, 1455
RsaNI	GTAC	7 cut(s)	85, 92, 602, 720, 963, 1288, 1454
RseI	CAYNNNNRTG	1 cut(s)	56
SacI	GAGCTC	1 cut(s)	198
SalI	GTCGAC	2 cut(s)	266, 1186
SapI	GCTCTTC	1 cut(s)	1577
SaqAI	TTAA	6 cut(s)	396, 459, 486, 887, 900, 1446
SatI	GCNGC	8 cut(s)	517, 633, 636, 639, 651, 820, 876, 1401
Sau3AI	GATC	1 cut(s)	1015
Sau96I	GGNCC	6 cut(s)	158, 280, 281, 575, 1359, 1484
ScaI	AGTACT	3 cut(s)	721, 964, 1289
SchI	GAGTC	4 cut(s)	168, 1082, 1139, 1423
ScrFI	CCNGG	1 cut(s)	365
SduI	GDGCHC	4 cut(s)	198, 284, 859, 1204
SfaNI	GCATC	5 cut(s)	547, 733, 1150, 1547, 1549
SfcI	CTRYAG	3 cut(s)	612, 915, 1078
SinI	GGWCC	2 cut(s)	158, 575
SmiMI	CAYNNNNRTG	1 cut(s)	56
SmlI	CTYRAG	4 cut(s)	407, 886, 899, 1205
SmoI	CTYRAG	4 cut(s)	407, 886, 899, 1205
SspMI	CTAG	2 cut(s)	711, 909
SstI	GAGCTC	1 cut(s)	198
StyD4I	CCNGG	1 cut(s)	363
TaaI	ACNGT	5 cut(s)	355, 469, 989, 1185, 1335
TaiI	ACGT	2 cut(s)	625, 862
TaqI	TCGA	7 cut(s)	267, 312, 328, 372, 843, 1187, 1420
TatI	WGTACW	3 cut(s)	719, 962, 1287
TfiI	GAWTC	3 cut(s)	28, 677, 1408
Tru1I	TTAA	6 cut(s)	396, 459, 486, 887, 900, 1446
Tru9I	TTAA	6 cut(s)	396, 459, 486, 887, 900, 1446
TscAI	CASTG	2 cut(s)	174, 994
TseFI	GTSAC	2 cut(s)	289, 1312
TseI	GCWGC	8 cut(s)	516, 632, 635, 638, 650, 819, 875, 1400
Tsp45I	GTSAC	2 cut(s)	289, 1312
TspDTI	ATGAA	7 cut(s)	68, 337, 683, 774, 792, 802, 1065
TspGWI	ACGGA	4 cut(s)	206, 253, 885, 1226
TspRI	CASTG	2 cut(s)	174, 994
Van91I	CCANNNNNTGG	1 cut(s)	1368
Vha464I	CTTAAG	2 cut(s)	886, 899
VneI	GTGCAC	1 cut(s)	1200
VpaK11BI	GGWCC	2 cut(s)	158, 575
XapI	RAATTY	6 cut(s)	344, 368, 764, 809, 940, 1098
XceI	RCATGY	2 cut(s)	1014, 1379
XmiI	GTMKAC	3 cut(s)	267, 1187, 1353
XmnI	GAANNNNTTC	3 cut(s)	144, 534, 813
XspI	CTAG	2 cut(s)	711, 909
ZrmI	AGTACT	3 cut(s)	721, 964, 1289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.