Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002832.1

Orthogroup ID

OG0002788

Physical Location & Seq

Genomic Coordinates Forward (+)

27206 .. 32688

Gene Structure 5483 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002832.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

atgctcgtcacaataacccggcccgggttagttcggttagggctctgcaaactcccaccgtttatttcccgcgtctctctaactgaagcttcaaaccagaagaagaagaagaagaagaagaagaagatgacggtgactaacagcggcatccaatacgccgttcagatcatcaccaaacacttcggcaacctcgtcgctaaagtttgcgaaacccttctgaaatccggaccgttaaacctgggcgctctgatccgatcgacggcgctcactccccagcaagtcaagaactctctcctgattctggtccagcacaattgcgtccagccctttacccaagagtccaaggctgggcttaaagttcagtacatggcggtgtacgataacatactccatcgacttaggtttgccaaatttctggcggttgtggcccaggagcttgatgatgattgcaaacaacttcttgctggtttacttgaacatggtagacttacacagcaacagttaatggacagaaccaatcagaaatccaaatcaaatagcagtcaagttcagaatgctgctcaagataactttattagacttgtgactgctcgttttgttgaacgctgcccggcccctgaaccacttcttgaagaagcacctgaacaagaaggtccaaagaagccacgctctaaatctgctaagatggctcaagtatcagagaccatagaacaacgtgttctagcagcagcaaggcctatggaagcaatacgatttttaattacgacagatccagaaactgatgatccatcacaaaaaagtgagaataattcctctagtatgagtgttggggagaagcgcaagtttgatgatttggatattggtgaacatgggtccaatgataaggaagtgattctttggcgtgctaattttgagcaattcattcgttgtctaaggcataaggcttgtgttgagaatgttagagcacgacatgatgatggagctgcagttgtgttaaaagctgtgctgaaggcaactagaatgcaggagaccaaagtgaaaacagattattcagttcctttaaagatgggtgccatttataatgaggtgatagatagtgcagccggccgtaatttgaccaaagtttctgtcaaagcttccctccacttgttgtgcggtgcagatcctgtaagaggaggatatgagggtgagggtgagggtgaggatgaggatgaggatgtgccatatagcgttgacttgaagaaaattatagaactgcttcagaatgatgaggtggagtcgattgttttgaaaagatatggacaggatgcttgtagaatatttaggttactgacaaggcagtcaaacactggtcagttttttgagacagataagatatcagtcgatgcccttgttgacaaaaaggaaacacctaagattctctataagctctggaaggatgactacgttcatatggagaaattatcattgacaacagctaaacagtcacaagtcatggtgtggaaagtgcacaagtccattgtttgggaacatgttttagatgagatgtaccatgcggcgtacaatttggttaagcgatatgatcatgagagggaagagaataaggaggttacaaataccccgaaggagaaacgtgtcggtgaattagagaaaaaagccaaccggtttctaggtgtcaggaaaattatggcattatcgcttgtgaagcttgatgatgctctcatgctcttccatgacttctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko04623 ko05169 map00230 map00240 map01100 map03020 map04623 map05169

Pfam Domains

Protein Families

HTH_9 RNA_pol_Rpc82

Protein Analysis

580

Amino Acids

65.71

Weight (kDa)

9.01

Isoelectric Point (pI)

35.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49000
fragaria_vesca	FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570
malus_domestica	MD01G1202100.v1.1 MD07G1271200.v1.1 MD07G1271300.v1.1
prunus_persica	Prupe.2G295500_v2.0.a1
pyrus_communis	pycom01g21170 pycom07g24820 pycom16g25350
rosa_chinensis	RchiOBHm_Chr1g0377571 RchiOBHm_Chr6g0258831
rosa_laevigata	RLG00000014582 RLG00000026516
rosa_multiflora	Rmu_co8176084.1_g000001 Rmu_sc0002832.1_g000008 Rmu_sc0005290.1_g000010 Rmu_sc0012587.1_g000006 Rmu_sc0041364.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281230 Rroxscaffold_7G00206100
rosa_rugosa	Rorug01G0403500 Rorug01G0403500 Rorug05G0583700
rosa_samantha	Rh1AG429300 Rh1BG380000 Rh1CG394200 Rh1DG411200 Rh6AG100200 Rh6BG091700 Rh6CG089200 Rh6DG083500
rosa_wichuraiana	Rw1G036950 Rw6G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1080
AasI	GACNNNNNNGTC	1 cut(s)	1339
AccB1I	GGYRCC	1 cut(s)	1070
AccB7I	CCANNNNNTGG	1 cut(s)	1524
AccI	GTMKAC	1 cut(s)	484
AccII	CGCG	1 cut(s)	72
AccIII	TCCGGA	1 cut(s)	224
AciI	CCGC	6 cut(s)	70, 144, 371, 419, 1155, 1556
AclWI	GGATC	4 cut(s)	244, 764, 779, 1157
AcoI	YGGCCR	1 cut(s)	1105
AcsI	RAATTY	1 cut(s)	410
AcuI	CTGAAG	3 cut(s)	105, 1028, 1244
AfaI	GTAC	4 cut(s)	365, 377, 1550, 1562
AfiI	CCNNNNNNNGG	6 cut(s)	24, 259, 301, 348, 1172, 1524
AflIII	ACRYGT	3 cut(s)	715, 1531, 1633
AgeI	ACCGGT	1 cut(s)	1662
AgsI	TTSAA	6 cut(s)	93, 476, 602, 632, 1240, 1291
AjnI	CCWGG	2 cut(s)	237, 429
AjuI	GAANNNNNNNTTGG	2 cut(s)	144, 176
AluBI	AGCT	8 cut(s)	89, 436, 983, 1001, 1136, 1429, 1478, 1708
AluI	AGCT	8 cut(s)	89, 436, 983, 1001, 1136, 1429, 1478, 1708
Alw21I	GWGCWC	2 cut(s)	967, 1512
Alw26I	GTCTC	4 cut(s)	79, 695, 1022, 1358
Alw44I	GTGCAC	1 cut(s)	1508
AlwI	GGATC	4 cut(s)	244, 764, 779, 1157
AlwNI	CAGNNNCTG	2 cut(s)	779, 1166
Ama87I	CYCGRG	1 cut(s)	23
Aor13HI	TCCGGA	1 cut(s)	224
AoxI	GGCC	5 cut(s)	20, 426, 612, 734, 1105
ApaLI	GTGCAC	1 cut(s)	1508
ApeKI	GCWGC	6 cut(s)	557, 606, 725, 728, 983, 1100
ApoI	RAATTY	1 cut(s)	410
ArsI	GACNNNNNNTTYG	2 cut(s)	1113, 1145
AsiGI	ACCGGT	1 cut(s)	1662
Asp700I	GAANNNNTTC	4 cut(s)	213, 624, 891, 1257
AspLEI	GCGC	3 cut(s)	245, 265, 840
AspS9I	GGNCC	7 cut(s)	21, 227, 304, 427, 613, 653, 873
AsuC2I	CCSGG	4 cut(s)	19, 24, 25, 611
AsuHPI	GGTGA	8 cut(s)	145, 163, 875, 1099, 1199, 1205, 1211, 1652
AvaI	CYCGRG	1 cut(s)	23
AvaII	GGWCC	4 cut(s)	227, 304, 653, 873
BaeGI	GKGCMC	1 cut(s)	1512
BanI	GGYRCC	1 cut(s)	1070
BanII	GRGCYC	1 cut(s)	45
BarI	GAAGNNNNNNTAC	2 cut(s)	1427, 1459
Bbv12I	GWGCWC	2 cut(s)	967, 1512
BbvI	GCAGC	6 cut(s)	544, 593, 737, 740, 970, 1112
BccI	CCATC	5 cut(s)	399, 679, 796, 971, 1060
BceAI	ACGGC	3 cut(s)	143, 276, 1092
BcgI	CGANNNNNNTGC	4 cut(s)	175, 209, 905, 939
BciT130I	CCWGG	2 cut(s)	239, 431
BclI	TGATCA	1 cut(s)	1582
BcnI	CCSGG	4 cut(s)	19, 24, 25, 611
BcoDI	GTCTC	4 cut(s)	79, 695, 1022, 1358
BfaI	CTAG	4 cut(s)	722, 816, 1017, 1670
BfmI	CTRYAG	1 cut(s)	984
BfoI	RGCGCY	2 cut(s)	246, 266
BisI	GCNGC	8 cut(s)	145, 558, 607, 726, 729, 984, 1101, 1557
BlsI	GCNGC	8 cut(s)	146, 559, 608, 727, 730, 985, 1102, 1558
Bme1390I	CCNGG	6 cut(s)	19, 24, 25, 239, 431, 611
Bme18I	GGWCC	4 cut(s)	227, 304, 653, 873
BmeT110I	CYCGRG	1 cut(s)	23
BmgT120I	GGNCC	7 cut(s)	21, 227, 304, 427, 613, 653, 873
BmiI	GGNNCC	3 cut(s)	615, 874, 1072
BmrFI	CCNGG	6 cut(s)	19, 24, 25, 239, 431, 611
BmsI	GCATC	4 cut(s)	156, 1297, 1375, 1705
BpuEI	CTTGAG	2 cut(s)	546, 675
BpuMI	CCSGG	4 cut(s)	19, 24, 25, 611
BsaI	GGTCTC	2 cut(s)	695, 1022
BsaJI	CCNNGG	4 cut(s)	23, 238, 342, 429
BsaWI	WCCGGW	2 cut(s)	224, 1662
BsaXI	ACNNNNNCTCC	2 cut(s)	972, 1002
Bsc4I	CCNNNNNNNGG	6 cut(s)	24, 259, 301, 348, 1172, 1524
Bse118I	RCCGGY	2 cut(s)	1103, 1662
Bse1I	ACTGG	1 cut(s)	1354
BseAI	TCCGGA	1 cut(s)	224
BseBI	CCWGG	2 cut(s)	239, 431
BseDI	CCNNGG	4 cut(s)	23, 238, 342, 429
BseGI	GGATG	6 cut(s)	147, 1210, 1216, 1222, 1312, 1444
BseLI	CCNNNNNNNGG	6 cut(s)	24, 259, 301, 348, 1172, 1524
BseNI	ACTGG	1 cut(s)	1354
BseRI	GAGGAG	1 cut(s)	1188
BseSI	GKGCMC	1 cut(s)	1512
BseX3I	CGGCCG	1 cut(s)	1105
BseXI	GCAGC	6 cut(s)	544, 593, 737, 740, 970, 1112
BseYI	CCCAGC	2 cut(s)	273, 347
BsgI	GTGCAG	2 cut(s)	1119, 1179
Bsh1236I	CGCG	1 cut(s)	72
Bsh1285I	CGRYCG	2 cut(s)	257, 1108
BshFI	GGCC	5 cut(s)	22, 428, 614, 736, 1107
BshNI	GGYRCC	1 cut(s)	1070
BshTI	ACCGGT	1 cut(s)	1662
BsiEI	CGRYCG	2 cut(s)	257, 1108
BsiHKAI	GWGCWC	2 cut(s)	967, 1512
BsiHKCI	CYCGRG	1 cut(s)	23
BsiSI	CCGG	6 cut(s)	19, 24, 225, 611, 1104, 1663
BslI	CCNNNNNNNGG	6 cut(s)	24, 259, 301, 348, 1172, 1524
BsmAI	GTCTC	4 cut(s)	79, 695, 1022, 1358
BsmBI	CGTCTC	1 cut(s)	79
BsmI	GAATGC	2 cut(s)	559, 1026
BsnI	GGCC	5 cut(s)	22, 428, 614, 736, 1107
Bso31I	GGTCTC	2 cut(s)	695, 1022
BsoBI	CYCGRG	1 cut(s)	23
Bsp1286I	GDGCHC	3 cut(s)	45, 967, 1512
Bsp13I	TCCGGA	1 cut(s)	224
Bsp143I	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
BspACI	CCGC	6 cut(s)	70, 144, 371, 419, 1155, 1556
BspANI	GGCC	5 cut(s)	22, 428, 614, 736, 1107
BspEI	TCCGGA	1 cut(s)	224
BspFNI	CGCG	1 cut(s)	72
BspHI	TCATGA	1 cut(s)	1585
BspLI	GGNNCC	3 cut(s)	615, 874, 1072
BspMAI	CTGCAG	1 cut(s)	988
BspPI	GGATC	4 cut(s)	244, 764, 779, 1157
BspQI	GCTCTTC	1 cut(s)	1733
BspT107I	GGYRCC	1 cut(s)	1070
BspTNI	GGTCTC	2 cut(s)	695, 1022
BsrFI	RCCGGY	2 cut(s)	1103, 1662
BsrI	ACTGG	1 cut(s)	1354
BssAI	RCCGGY	2 cut(s)	1103, 1662
BssECI	CCNNGG	4 cut(s)	23, 238, 342, 429
BssMI	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
BssT1I	CCWWGG	1 cut(s)	342
Bst2UI	CCWGG	2 cut(s)	239, 431
Bst4CI	ACNGT	5 cut(s)	60, 133, 231, 501, 1485
Bst6I	CTCTTC	2 cut(s)	1590, 1733
BstC8I	GCNNGC	2 cut(s)	903, 1105
BstDEI	CTNAG	4 cut(s)	398, 681, 932, 1413
BstENI	CCTNNNNNAGG	1 cut(s)	1170
BstF5I	GGATG	6 cut(s)	147, 1210, 1216, 1222, 1312, 1444
BstFNI	CGCG	1 cut(s)	72
BstH2I	RGCGCY	2 cut(s)	246, 266
BstHHI	GCGC	3 cut(s)	245, 265, 840
BstKTI	GATC	7 cut(s)	168, 252, 257, 772, 787, 1165, 1585
BstMAI	GTCTC	4 cut(s)	79, 695, 1022, 1358
BstMBI	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
BstMCI	CGRYCG	2 cut(s)	257, 1108
BstMWI	GCNNNNNNNGC	3 cut(s)	425, 686, 1705
BstNI	CCWGG	2 cut(s)	239, 431
BstNSI	RCATGY	1 cut(s)	1535
BstSCI	CCNGG	6 cut(s)	17, 22, 23, 237, 429, 609
BstSFI	CTRYAG	1 cut(s)	984
BstSLI	GKGCMC	1 cut(s)	1512
BstUI	CGCG	1 cut(s)	72
BstV1I	GCAGC	6 cut(s)	544, 593, 737, 740, 970, 1112
BstX2I	RGATCY	2 cut(s)	769, 1162
BstXI	CCANNNNNNTGG	1 cut(s)	415
BstYI	RGATCY	2 cut(s)	769, 1162
BstZI	CGGCCG	1 cut(s)	1105
BsuRI	GGCC	5 cut(s)	22, 428, 614, 736, 1107
BtsCI	GGATG	6 cut(s)	147, 1210, 1216, 1222, 1312, 1444
BtsIMutI	CAGTG	1 cut(s)	1347
Cac8I	GCNNGC	2 cut(s)	903, 1105
CaiI	CAGNNNCTG	2 cut(s)	779, 1166
CciI	TCATGA	1 cut(s)	1585
CfoI	GCGC	3 cut(s)	245, 265, 840
Cfr10I	RCCGGY	2 cut(s)	1103, 1662
Cfr13I	GGNCC	7 cut(s)	21, 227, 304, 427, 613, 653, 873
Cfr9I	CCCGGG	1 cut(s)	23
CpoI	CGGWCCG	1 cut(s)	227
CseI	GACGC	2 cut(s)	61, 307
Csp6I	GTAC	4 cut(s)	364, 376, 1549, 1561
CspAI	ACCGGT	1 cut(s)	1662
CspI	CGGWCCG	1 cut(s)	227
CviQI	GTAC	4 cut(s)	364, 376, 1549, 1561
DdeI	CTNAG	4 cut(s)	398, 681, 932, 1413
DpnI	GATC	7 cut(s)	167, 251, 256, 771, 786, 1164, 1584
DpnII	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
DraI	TTTAAA	1 cut(s)	1062
DrdI	GACNNNNNNGTC	1 cut(s)	1339
DseDI	GACNNNNNNGTC	1 cut(s)	1339
EaeI	YGGCCR	1 cut(s)	1105
EagI	CGGCCG	1 cut(s)	1105
Eam1104I	CTCTTC	2 cut(s)	1590, 1733
EarI	CTCTTC	2 cut(s)	1590, 1733
EclXI	CGGCCG	1 cut(s)	1105
Eco130I	CCWWGG	1 cut(s)	342
Eco147I	AGGCCT	1 cut(s)	736
Eco24I	GRGCYC	1 cut(s)	45
Eco31I	GGTCTC	2 cut(s)	695, 1022
Eco32I	GATATC	1 cut(s)	1377
Eco47I	GGWCC	4 cut(s)	227, 304, 653, 873
Eco52I	CGGCCG	1 cut(s)	1105
Eco57I	CTGAAG	3 cut(s)	105, 1028, 1244
Eco88I	CYCGRG	1 cut(s)	23
EcoNI	CCTNNNNNAGG	1 cut(s)	1170
EcoRII	CCWGG	2 cut(s)	237, 429
EcoRV	GATATC	1 cut(s)	1377
EcoT14I	CCWWGG	1 cut(s)	342
EcoT38I	GRGCYC	1 cut(s)	45
ErhI	CCWWGG	1 cut(s)	342
Esp3I	CGTCTC	1 cut(s)	79
FalI	AAGNNNNNCTT	2 cut(s)	879, 911
FauI	CCCGC	1 cut(s)	77
FauNDI	CATATG	1 cut(s)	1452
FbaI	TGATCA	1 cut(s)	1582
FblI	GTMKAC	1 cut(s)	484
Fnu4HI	GCNGC	8 cut(s)	145, 558, 607, 726, 729, 984, 1101, 1557
FokI	GGATG	6 cut(s)	134, 1217, 1223, 1229, 1319, 1451
FriOI	GRGCYC	1 cut(s)	45
Fsp4HI	GCNGC	8 cut(s)	145, 558, 607, 726, 729, 984, 1101, 1557
FspBI	CTAG	4 cut(s)	722, 816, 1017, 1670
GlaI	GCGC	3 cut(s)	244, 264, 839
GluI	GCNGC	8 cut(s)	145, 558, 607, 726, 729, 984, 1101, 1557
GsaI	CCCAGC	2 cut(s)	277, 351
HaeII	RGCGCY	2 cut(s)	246, 266
HaeIII	GGCC	5 cut(s)	22, 428, 614, 736, 1107
HapII	CCGG	6 cut(s)	19, 24, 225, 611, 1104, 1663
HgaI	GACGC	2 cut(s)	61, 307
HhaI	GCGC	3 cut(s)	245, 265, 840
Hin6I	GCGC	3 cut(s)	243, 263, 838
HinP1I	GCGC	3 cut(s)	243, 263, 838
HincII	GTYRAC	2 cut(s)	1234, 1396
HindII	GTYRAC	2 cut(s)	1234, 1396
HindIII	AAGCTT	3 cut(s)	87, 1134, 1706
HinfI	GANTC	5 cut(s)	298, 338, 892, 1277, 1417
HpaII	CCGG	6 cut(s)	19, 24, 225, 611, 1104, 1663
HphI	GGTGA	8 cut(s)	145, 163, 875, 1099, 1199, 1205, 1211, 1652
Hpy166II	GTNNAC	7 cut(s)	376, 470, 485, 866, 1234, 1396, 1510
Hpy188I	TCNGA	9 cut(s)	165, 219, 249, 254, 522, 552, 700, 1263, 1742
Hpy188III	TCNNGA	9 cut(s)	225, 283, 295, 563, 629, 773, 1432, 1586, 1678
Hpy8I	GTNNAC	7 cut(s)	376, 470, 485, 866, 1234, 1396, 1510
Hpy99I	CGWCG	2 cut(s)	197, 262
HpyAV	CCTTC	5 cut(s)	224, 644, 1003, 1429, 1618
HpyCH4III	ACNGT	5 cut(s)	60, 133, 231, 501, 1485
HpyCH4IV	ACGT	3 cut(s)	715, 1446, 1633
HpyCH4V	TGCA	7 cut(s)	48, 450, 986, 1024, 1100, 1160, 1510
HpyF10VI	GCNNNNNNNGC	3 cut(s)	425, 686, 1705
HpyF3I	CTNAG	4 cut(s)	398, 681, 932, 1413
HpySE526I	ACGT	3 cut(s)	715, 1446, 1633
HspAI	GCGC	3 cut(s)	243, 263, 838
Kpn2I	TCCGGA	1 cut(s)	224
KroI	GCCGGC	1 cut(s)	1103
KroNI	GCCGGC	1 cut(s)	1105
Ksp22I	TGATCA	1 cut(s)	1582
Kzo9I	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
LguI	GCTCTTC	1 cut(s)	1733
LmnI	GCTCC	2 cut(s)	433, 980
Lsp1109I	GCAGC	6 cut(s)	544, 593, 737, 740, 970, 1112
LweI	GCATC	4 cut(s)	156, 1297, 1375, 1705
MaeI	CTAG	4 cut(s)	722, 816, 1017, 1670
MaeII	ACGT	3 cut(s)	715, 1446, 1633
MaeIII	GTNAC	6 cut(s)	7, 133, 583, 1326, 1485, 1609
MalI	GATC	7 cut(s)	167, 251, 256, 771, 786, 1164, 1584
MboI	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
MfeI	CAATTG	1 cut(s)	313
MflI	RGATCY	2 cut(s)	769, 1162
MhlI	GDGCHC	3 cut(s)	45, 967, 1512
MlyI	GAGTC	2 cut(s)	347, 1286
MroI	TCCGGA	1 cut(s)	224
MroNI	GCCGGC	1 cut(s)	1103
MroXI	GAANNNNTTC	4 cut(s)	213, 624, 891, 1257
MseI	TTAA	7 cut(s)	233, 354, 503, 758, 995, 1061, 1572
MslI	CAYNNNNRTG	2 cut(s)	371, 975
MspA1I	CMGCKG	1 cut(s)	144
MspI	CCGG	6 cut(s)	19, 24, 225, 611, 1104, 1663
MspR9I	CCNGG	6 cut(s)	19, 24, 25, 239, 431, 611
MunI	CAATTG	1 cut(s)	313
Mva1269I	GAATGC	2 cut(s)	559, 1026
MvaI	CCWGG	2 cut(s)	239, 431
MvnI	CGCG	1 cut(s)	72
MwoI	GCNNNNNNNGC	3 cut(s)	425, 686, 1705
NaeI	GCCGGC	1 cut(s)	1105
NciI	CCSGG	4 cut(s)	19, 24, 25, 611
NdeI	CATATG	1 cut(s)	1452
NdeII	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
NgoMIV	GCCGGC	1 cut(s)	1103
NlaIV	GGNNCC	3 cut(s)	615, 874, 1072
NmuCI	GTSAC	4 cut(s)	7, 133, 583, 1485
NspI	RCATGY	1 cut(s)	1535
PagI	TCATGA	1 cut(s)	1585
PceI	AGGCCT	1 cut(s)	736
PciI	ACATGT	1 cut(s)	1531
PciSI	GCTCTTC	1 cut(s)	1733
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PctI	GAATGC	2 cut(s)	559, 1026
PdiI	GCCGGC	1 cut(s)	1105
PdmI	GAANNNNTTC	4 cut(s)	213, 624, 891, 1257
PfeI	GAWTC	3 cut(s)	298, 892, 1417
PflMI	CCANNNNNTGG	1 cut(s)	1524
PinAI	ACCGGT	1 cut(s)	1662
PkrI	GCNGC	8 cut(s)	146, 559, 608, 727, 730, 985, 1102, 1558
Ple19I	CGATCG	1 cut(s)	257
PleI	GAGTC	2 cut(s)	346, 1285
PpsI	GAGTC	2 cut(s)	346, 1285
PscI	ACATGT	1 cut(s)	1531
PsiI	TTATAA	1 cut(s)	1080
Psp6I	CCWGG	2 cut(s)	237, 429
PspFI	CCCAGC	2 cut(s)	273, 347
PspGI	CCWGG	2 cut(s)	237, 429
PspN4I	GGNNCC	3 cut(s)	615, 874, 1072
PspPI	GGNCC	7 cut(s)	21, 227, 304, 427, 613, 653, 873
PstI	CTGCAG	1 cut(s)	988
PstNI	CAGNNNCTG	2 cut(s)	779, 1166
PsuI	RGATCY	2 cut(s)	769, 1162
PvuI	CGATCG	1 cut(s)	257
RsaI	GTAC	4 cut(s)	365, 377, 1550, 1562
RsaNI	GTAC	4 cut(s)	364, 376, 1549, 1561
RseI	CAYNNNNRTG	2 cut(s)	371, 975
Rsr2I	CGGWCCG	1 cut(s)	227
RsrII	CGGWCCG	1 cut(s)	227
SapI	GCTCTTC	1 cut(s)	1733
SaqAI	TTAA	7 cut(s)	233, 354, 503, 758, 995, 1061, 1572
SatI	GCNGC	8 cut(s)	145, 558, 607, 726, 729, 984, 1101, 1557
Sau3AI	GATC	7 cut(s)	165, 249, 254, 769, 784, 1162, 1582
Sau96I	GGNCC	7 cut(s)	21, 227, 304, 427, 613, 653, 873
SchI	GAGTC	2 cut(s)	347, 1286
ScrFI	CCNGG	6 cut(s)	19, 24, 25, 239, 431, 611
SduI	GDGCHC	3 cut(s)	45, 967, 1512
SfaNI	GCATC	4 cut(s)	156, 1297, 1375, 1705
SfcI	CTRYAG	1 cut(s)	984
SinI	GGWCC	4 cut(s)	227, 304, 653, 873
SmaI	CCCGGG	1 cut(s)	25
SmiMI	CAYNNNNRTG	2 cut(s)	371, 975
SmlI	CTYRAG	2 cut(s)	561, 690
SmoI	CTYRAG	2 cut(s)	561, 690
SseBI	AGGCCT	1 cut(s)	736
SsiI	CCGC	6 cut(s)	70, 144, 371, 419, 1155, 1556
SspI	AATATT	1 cut(s)	1320
SspMI	CTAG	4 cut(s)	722, 816, 1017, 1670
StuI	AGGCCT	1 cut(s)	736
StyD4I	CCNGG	6 cut(s)	17, 22, 23, 237, 429, 609
StyI	CCWWGG	1 cut(s)	342
TaaI	ACNGT	5 cut(s)	60, 133, 231, 501, 1485
TaiI	ACGT	3 cut(s)	718, 1449, 1636
TaqI	TCGA	4 cut(s)	257, 394, 1280, 1383
TatI	WGTACW	1 cut(s)	363
TauI	GCSGC	2 cut(s)	147, 1559
TfiI	GAWTC	3 cut(s)	298, 892, 1417
Tru1I	TTAA	7 cut(s)	233, 354, 503, 758, 995, 1061, 1572
Tru9I	TTAA	7 cut(s)	233, 354, 503, 758, 995, 1061, 1572
TscAI	CASTG	1 cut(s)	1354
TseFI	GTSAC	4 cut(s)	7, 133, 583, 1485
TseI	GCWGC	6 cut(s)	557, 606, 725, 728, 983, 1100
Tsp45I	GTSAC	4 cut(s)	7, 133, 583, 1485
TspDTI	ATGAA	2 cut(s)	910, 1439
TspMI	CCCGGG	1 cut(s)	23
TspRI	CASTG	1 cut(s)	1354
Van91I	CCANNNNNTGG	1 cut(s)	1524
VneI	GTGCAC	1 cut(s)	1508
VpaK11BI	GGWCC	4 cut(s)	227, 304, 653, 873
XagI	CCTNNNNNAGG	1 cut(s)	1170
XapI	RAATTY	1 cut(s)	410
XceI	RCATGY	1 cut(s)	1535
XmaI	CCCGGG	1 cut(s)	23
XmiI	GTMKAC	1 cut(s)	484
XmnI	GAANNNNTTC	4 cut(s)	213, 624, 891, 1257
XspI	CTAG	4 cut(s)	722, 816, 1017, 1670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.