Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002788

Physical Location & Seq

Genomic Coordinates Reverse (-)

55762571 .. 55767881

Gene Structure 5311 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00206100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGACGGTGACTAACAACGGCATCCAATACGCCGTTCAGATCATCACCAAACACTTCGGCAAACCCGTCGCTAAAGTATGCGAGACCCTTCTGAAATCCGGACCACTAAACCTGGGTGCCTTAATCCGATCGACGGCGCTCACTCCCCAGCAAGTCAAGAACTCTCTCCTGATTCTGGTTCAGCACAATTGCGTCCAGCCCTTTACCCAAGAGTCCAAGGCTGGGCTTAAAGTTCAGTACATTGCGGTGTACGATAACATACTCCATCGCCTTAGGTTTGCGAAATTTCTGGCGGTTGTGGCCCAGGAGCTTGATGATGATTGCAAACAACTTCTTGCTGGTTTACTCGAGCATGGTAGACTTACACAGCAACAATTAATGGACAGAGCCAATCAGAAATCCAAATCAAATAGTAGTCAAGTTCAGAATGCTGCTCAAGATAACTTTGTTAGACTTGTGACTGCCCATTTTGTTGAACGCTGCCCGGCCCCAGAACCACTTCTTGAAGAAGCACCTGAACAAGAACGTCCAAAGAAACCACGCACTAAACCTGCTAAGATGGCTCAAGTATCAGAGACCATAGAACAACGTGTTCTAGCAGCAGCAAAGCCTATGGAAGCAATAAGATTCTTAATTATGACAGATGCAGAAATTGATGATCCATTACAAAAAAGTGAGAATAATTCCTCTGGTATGAGTGTTGGGGTGCAGCGCAAGTTTGATGATTTGGATATTGGTGAAGAACATGGGTCTAATGATAAGGAAGTGATTCTTTGGCGTGCTAATTTTGAGCAGTTCATTTGTTGTCTAAGGCATAAGGCTTATGAAGCTGCAGTTGAGTTAAGAGCAATGCTGAAGGCAACTAGAACTGCAGAGACCAAAGTGAAAACAGATTATTCAGGAGTATATGAGGATGAGGGTGAGGGTGAGGATGGGGATGTGCCATATAGCATTGCCTTGAAGAAAATTATAGAACTGCTTCAGAATGATGAGGTGGAGTTGATTGTTTTGAAAAGATATGGACAGGATGCTCATAGTATATTTAGGTTACTGACAACGCAGTCAAACGCTGGTCAGTTTTTTGAGACAGATATGATATCAAAAGAGGCCTTTGTTGACAAAATTGAAGCACTTAAGATTCTTTATAAGCTCTGGAAGGATGACTACGTACATATGGAGAAATTATCAGTGACAACAGCTAAACAGTCACAAGTCATGGTGTGGAAAGTACACAAGCCCATTGTTTGGGAACATGTTTTAGATGAGATGTACCATGCGGCGTACAATTTGGTTAAGCGATATGATCATGAGAGGGAAGAGAATAAGGAGGTTACTAATACCCCCAAGGAGAAACGCGTGGGTGAATTAGAGAAAAAAGCCAACCGGTTTCTAGGTGTCAGGAAAATCATGGCATTATCCCTCATGAAGCTTGATGATGCTCTCACGCTCTTCCATGACTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko04623 ko05169 map00230 map00240 map01100 map03020 map04623 map05169

Pfam Domains

Protein Families

HTH_9 RNA_pol_Rpc82

Protein Analysis

487

Amino Acids

55.53

Weight (kDa)

6.43

Isoelectric Point (pI)

32.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HTH_9	PF08221	10 - 66	7.5e-18	RNA polymerase III subunit RPC82 helix-turn-helix domain
RNA_pol_Rpc82	PF05645	147 - 279	4e-09	RNA polymerase III subunit RPC82
WHD_POLR3C	PF22536	332 - 401	3.7e-07	POLR3C, C-terminal winged-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49000
fragaria_vesca	FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570 FvH4_7g29570
malus_domestica	MD01G1202100.v1.1 MD07G1271200.v1.1 MD07G1271300.v1.1
prunus_persica	Prupe.2G295500_v2.0.a1
pyrus_communis	pycom01g21170 pycom07g24820 pycom16g25350
rosa_chinensis	RchiOBHm_Chr1g0377571 RchiOBHm_Chr6g0258831
rosa_laevigata	RLG00000014582 RLG00000026516
rosa_multiflora	Rmu_co8176084.1_g000001 Rmu_sc0002832.1_g000008 Rmu_sc0005290.1_g000010 Rmu_sc0012587.1_g000006 Rmu_sc0041364.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281230 Rroxscaffold_7G00206100
rosa_rugosa	Rorug01G0403500 Rorug01G0403500 Rorug05G0583700
rosa_samantha	Rh1AG429300 Rh1BG380000 Rh1CG394200 Rh1DG411200 Rh6AG100200 Rh6BG091700 Rh6CG089200 Rh6DG083500
rosa_wichuraiana	Rw1G036950 Rw6G008680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1146
AasI	GACNNNNNNGTC	1 cut(s)	1060
Acc36I	ACCTGC	1 cut(s)	559
AccB1I	GGYRCC	1 cut(s)	116
AccB7I	CCANNNNNTGG	1 cut(s)	1245
AccI	GTMKAC	1 cut(s)	358
AccII	CGCG	1 cut(s)	1356
AccIII	TCCGGA	1 cut(s)	98
AciI	CCGC	3 cut(s)	245, 293, 1277
AclWI	GGATC	1 cut(s)	653
AcsI	RAATTY	1 cut(s)	284
AcuI	CTGAAG	2 cut(s)	875, 965
AfaI	GTAC	6 cut(s)	239, 251, 1170, 1230, 1271, 1283
AfiI	CCNNNNNNNGG	4 cut(s)	133, 175, 222, 1245
AflII	CTTAAG	1 cut(s)	1133
AflIII	ACRYGT	3 cut(s)	589, 1252, 1354
AgeI	ACCGGT	1 cut(s)	1383
AgsI	TTSAA	5 cut(s)	476, 506, 961, 1012, 1127
AjnI	CCWGG	2 cut(s)	111, 303
AjuI	GAANNNNNNNTTGG	2 cut(s)	18, 50
AluBI	AGCT	5 cut(s)	310, 830, 1150, 1199, 1429
AluI	AGCT	5 cut(s)	310, 830, 1150, 1199, 1429
Alw26I	GTCTC	4 cut(s)	77, 569, 869, 1079
AlwI	GGATC	1 cut(s)	653
Ama87I	CYCGRG	1 cut(s)	347
Aor13HI	TCCGGA	1 cut(s)	98
AoxI	GGCC	3 cut(s)	300, 486, 1107
ApeKI	GCWGC	6 cut(s)	431, 480, 599, 602, 709, 830
ApoI	RAATTY	1 cut(s)	284
AseI	ATTAAT	1 cut(s)	377
AsiGI	ACCGGT	1 cut(s)	1383
Asp700I	GAANNNNTTC	3 cut(s)	498, 768, 978
AspLEI	GCGC	2 cut(s)	139, 714
AspS9I	GGNCC	3 cut(s)	101, 301, 487
AsuC2I	CCSGG	1 cut(s)	485
AsuHPI	GGTGA	6 cut(s)	19, 37, 749, 932, 938, 1373
AvaI	CYCGRG	1 cut(s)	347
AvaII	GGWCC	1 cut(s)	101
AxyI	CCTNAGG	1 cut(s)	272
BanI	GGYRCC	1 cut(s)	116
BarI	GAAGNNNNNNTAC	2 cut(s)	1148, 1180
BbvI	GCAGC	6 cut(s)	418, 467, 611, 614, 721, 817
BccI	CCATC	3 cut(s)	273, 553, 926
BceAI	ACGGC	3 cut(s)	17, 34, 150
BcgI	CGANNNNNNTGC	2 cut(s)	49, 83
BciT130I	CCWGG	2 cut(s)	113, 305
BclI	TGATCA	1 cut(s)	1303
BcnI	CCSGG	1 cut(s)	485
BcoDI	GTCTC	4 cut(s)	77, 569, 869, 1079
BfaI	CTAG	3 cut(s)	596, 864, 1391
BfmI	CTRYAG	2 cut(s)	831, 870
BfoI	RGCGCY	1 cut(s)	140
BfrI	CTTAAG	1 cut(s)	1133
BfuAI	ACCTGC	1 cut(s)	559
BisI	GCNGC	7 cut(s)	432, 481, 600, 603, 710, 831, 1278
BlsI	GCNGC	7 cut(s)	433, 482, 601, 604, 711, 832, 1279
Bme1390I	CCNGG	3 cut(s)	113, 305, 485
Bme18I	GGWCC	1 cut(s)	101
BmeT110I	CYCGRG	1 cut(s)	347
BmgT120I	GGNCC	3 cut(s)	101, 301, 487
BmiI	GGNNCC	2 cut(s)	118, 489
BmrFI	CCNGG	3 cut(s)	113, 305, 485
BmsI	GCATC	4 cut(s)	30, 634, 1018, 1426
BpuEI	CTTGAG	2 cut(s)	420, 549
BpuMI	CCSGG	1 cut(s)	485
BsaAI	YACGTR	1 cut(s)	1168
BsaI	GGTCTC	3 cut(s)	77, 569, 869
BsaJI	CCNNGG	4 cut(s)	112, 216, 303, 1344
BsaWI	WCCGGW	2 cut(s)	98, 1383
Bsc4I	CCNNNNNNNGG	4 cut(s)	133, 175, 222, 1245
Bse118I	RCCGGY	1 cut(s)	1383
Bse21I	CCTNAGG	1 cut(s)	272
Bse3DI	GCAATG	3 cut(s)	240, 855, 951
BseAI	TCCGGA	1 cut(s)	98
BseBI	CCWGG	2 cut(s)	113, 305
BseDI	CCNNGG	4 cut(s)	112, 216, 303, 1344
BseGI	GGATG	6 cut(s)	21, 919, 937, 943, 1033, 1165
BseLI	CCNNNNNNNGG	4 cut(s)	133, 175, 222, 1245
BseMI	GCAATG	3 cut(s)	240, 855, 951
BseXI	GCAGC	6 cut(s)	418, 467, 611, 614, 721, 817
BseYI	CCCAGC	2 cut(s)	147, 221
BsgI	GTGCAG	1 cut(s)	728
Bsh1236I	CGCG	1 cut(s)	1356
Bsh1285I	CGRYCG	1 cut(s)	131
BshFI	GGCC	3 cut(s)	302, 488, 1109
BshNI	GGYRCC	1 cut(s)	116
BshTI	ACCGGT	1 cut(s)	1383
BsiEI	CGRYCG	1 cut(s)	131
BsiHKCI	CYCGRG	1 cut(s)	347
BsiSI	CCGG	3 cut(s)	99, 485, 1384
BslI	CCNNNNNNNGG	4 cut(s)	133, 175, 222, 1245
BsmAI	GTCTC	4 cut(s)	77, 569, 869, 1079
BsmI	GAATGC	1 cut(s)	433
BsnI	GGCC	3 cut(s)	302, 488, 1109
Bso31I	GGTCTC	3 cut(s)	77, 569, 869
BsoBI	CYCGRG	1 cut(s)	347
Bsp13I	TCCGGA	1 cut(s)	98
Bsp143I	GATC	4 cut(s)	39, 128, 658, 1303
BspACI	CCGC	3 cut(s)	245, 293, 1277
BspANI	GGCC	3 cut(s)	302, 488, 1109
BspEI	TCCGGA	1 cut(s)	98
BspFNI	CGCG	1 cut(s)	1356
BspHI	TCATGA	2 cut(s)	1306, 1422
BspLI	GGNNCC	2 cut(s)	118, 489
BspMAI	CTGCAG	2 cut(s)	835, 874
BspMI	ACCTGC	1 cut(s)	559
BspPI	GGATC	1 cut(s)	653
BspQI	GCTCTTC	1 cut(s)	1454
BspT107I	GGYRCC	1 cut(s)	116
BspTI	CTTAAG	1 cut(s)	1133
BspTNI	GGTCTC	3 cut(s)	77, 569, 869
BsrDI	GCAATG	3 cut(s)	240, 855, 951
BsrFI	RCCGGY	1 cut(s)	1383
BssAI	RCCGGY	1 cut(s)	1383
BssECI	CCNNGG	4 cut(s)	112, 216, 303, 1344
BssMI	GATC	4 cut(s)	39, 128, 658, 1303
BssT1I	CCWWGG	2 cut(s)	216, 1344
Bst2UI	CCWGG	2 cut(s)	113, 305
Bst4CI	ACNGT	2 cut(s)	7, 1206
Bst6I	CTCTTC	2 cut(s)	1311, 1454
BstAFI	CTTAAG	1 cut(s)	1133
BstBAI	YACGTR	1 cut(s)	1168
BstC8I	GCNNGC	1 cut(s)	780
BstDEI	CTNAG	3 cut(s)	272, 555, 809
BstF5I	GGATG	6 cut(s)	21, 919, 937, 943, 1033, 1165
BstFNI	CGCG	1 cut(s)	1356
BstH2I	RGCGCY	1 cut(s)	140
BstHHI	GCGC	2 cut(s)	139, 714
BstKTI	GATC	4 cut(s)	42, 131, 661, 1306
BstMAI	GTCTC	4 cut(s)	77, 569, 869, 1079
BstMBI	GATC	4 cut(s)	39, 128, 658, 1303
BstMCI	CGRYCG	1 cut(s)	131
BstMWI	GCNNNNNNNGC	3 cut(s)	299, 560, 827
BstNI	CCWGG	2 cut(s)	113, 305
BstNSI	RCATGY	1 cut(s)	1256
BstSCI	CCNGG	3 cut(s)	111, 303, 483
BstSFI	CTRYAG	2 cut(s)	831, 870
BstSNI	TACGTA	1 cut(s)	1168
BstUI	CGCG	1 cut(s)	1356
BstV1I	GCAGC	6 cut(s)	418, 467, 611, 614, 721, 817
Bsu36I	CCTNAGG	1 cut(s)	272
BsuRI	GGCC	3 cut(s)	302, 488, 1109
BtgZI	GCGATG	1 cut(s)	251
BtsCI	GGATG	6 cut(s)	21, 919, 937, 943, 1033, 1165
BtsIMutI	CAGTG	1 cut(s)	1194
BveI	ACCTGC	1 cut(s)	559
Cac8I	GCNNGC	1 cut(s)	780
CciI	TCATGA	2 cut(s)	1306, 1422
CfoI	GCGC	2 cut(s)	139, 714
Cfr10I	RCCGGY	1 cut(s)	1383
Cfr13I	GGNCC	3 cut(s)	101, 301, 487
CseI	GACGC	1 cut(s)	181
Csp6I	GTAC	6 cut(s)	238, 250, 1169, 1229, 1270, 1282
CspAI	ACCGGT	1 cut(s)	1383
CviAII	CATG	9 cut(s)	353, 746, 1216, 1253, 1274, 1307, 1408, 1423, 1454
CviQI	GTAC	6 cut(s)	238, 250, 1169, 1229, 1270, 1282
DdeI	CTNAG	3 cut(s)	272, 555, 809
DpnI	GATC	4 cut(s)	41, 130, 660, 1305
DpnII	GATC	4 cut(s)	39, 128, 658, 1303
DrdI	GACNNNNNNGTC	1 cut(s)	1060
DseDI	GACNNNNNNGTC	1 cut(s)	1060
Eam1104I	CTCTTC	2 cut(s)	1311, 1454
EarI	CTCTTC	2 cut(s)	1311, 1454
Eco105I	TACGTA	1 cut(s)	1168
Eco130I	CCWWGG	2 cut(s)	216, 1344
Eco147I	AGGCCT	1 cut(s)	1109
Eco31I	GGTCTC	3 cut(s)	77, 569, 869
Eco32I	GATATC	1 cut(s)	1098
Eco47I	GGWCC	1 cut(s)	101
Eco57I	CTGAAG	2 cut(s)	875, 965
Eco81I	CCTNAGG	1 cut(s)	272
Eco88I	CYCGRG	1 cut(s)	347
EcoRII	CCWGG	2 cut(s)	111, 303
EcoRV	GATATC	1 cut(s)	1098
EcoT14I	CCWWGG	2 cut(s)	216, 1344
ErhI	CCWWGG	2 cut(s)	216, 1344
FaeI	CATG	9 cut(s)	356, 749, 1219, 1256, 1277, 1310, 1411, 1426, 1457
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FatI	CATG	9 cut(s)	352, 745, 1215, 1252, 1273, 1306, 1407, 1422, 1453
FauNDI	CATATG	1 cut(s)	1173
FbaI	TGATCA	1 cut(s)	1303
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	7 cut(s)	432, 481, 600, 603, 710, 831, 1278
FokI	GGATG	6 cut(s)	8, 926, 944, 950, 1040, 1172
Fsp4HI	GCNGC	7 cut(s)	432, 481, 600, 603, 710, 831, 1278
FspBI	CTAG	3 cut(s)	596, 864, 1391
GlaI	GCGC	2 cut(s)	138, 713
GluI	GCNGC	7 cut(s)	432, 481, 600, 603, 710, 831, 1278
GsaI	CCCAGC	2 cut(s)	151, 225
HaeII	RGCGCY	1 cut(s)	140
HaeIII	GGCC	3 cut(s)	302, 488, 1109
HapII	CCGG	3 cut(s)	99, 485, 1384
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	2 cut(s)	139, 714
Hin1II	CATG	9 cut(s)	356, 749, 1219, 1256, 1277, 1310, 1411, 1426, 1457
Hin6I	GCGC	2 cut(s)	137, 712
HinP1I	GCGC	2 cut(s)	137, 712
HincII	GTYRAC	1 cut(s)	1117
HindII	GTYRAC	1 cut(s)	1117
HindIII	AAGCTT	1 cut(s)	1427
HinfI	GANTC	5 cut(s)	172, 212, 627, 769, 1138
HpaII	CCGG	3 cut(s)	99, 485, 1384
HphI	GGTGA	6 cut(s)	19, 37, 749, 932, 938, 1373
Hpy166II	GTNNAC	5 cut(s)	250, 344, 359, 1117, 1231
Hpy188I	TCNGA	8 cut(s)	39, 93, 128, 396, 426, 574, 984, 1463
Hpy8I	GTNNAC	5 cut(s)	250, 344, 359, 1117, 1231
Hpy99I	CGWCG	2 cut(s)	71, 136
HpyAV	CCTTC	3 cut(s)	98, 850, 1150
HpyCH4III	ACNGT	2 cut(s)	7, 1206
HpyCH4IV	ACGT	3 cut(s)	526, 589, 1167
HpyCH4V	TGCA	5 cut(s)	324, 647, 709, 833, 872
HpyF10VI	GCNNNNNNNGC	3 cut(s)	299, 560, 827
HpyF3I	CTNAG	3 cut(s)	272, 555, 809
HpySE526I	ACGT	3 cut(s)	526, 589, 1167
Hsp92II	CATG	9 cut(s)	356, 749, 1219, 1256, 1277, 1310, 1411, 1426, 1457
HspAI	GCGC	2 cut(s)	137, 712
Kpn2I	TCCGGA	1 cut(s)	98
Ksp22I	TGATCA	1 cut(s)	1303
Kzo9I	GATC	4 cut(s)	39, 128, 658, 1303
LguI	GCTCTTC	1 cut(s)	1454
LmnI	GCTCC	1 cut(s)	307
Lsp1109I	GCAGC	6 cut(s)	418, 467, 611, 614, 721, 817
LweI	GCATC	4 cut(s)	30, 634, 1018, 1426
MaeI	CTAG	3 cut(s)	596, 864, 1391
MaeII	ACGT	3 cut(s)	526, 589, 1167
MaeIII	GTNAC	6 cut(s)	7, 457, 1047, 1189, 1206, 1330
MalI	GATC	4 cut(s)	41, 130, 660, 1305
MboI	GATC	4 cut(s)	39, 128, 658, 1303
MboII	GAAGA	5 cut(s)	518, 752, 973, 1328, 1441
MfeI	CAATTG	1 cut(s)	187
MluI	ACGCGT	1 cut(s)	1354
MlyI	GAGTC	1 cut(s)	221
MroI	TCCGGA	1 cut(s)	98
MroXI	GAANNNNTTC	3 cut(s)	498, 768, 978
MseI	TTAA	7 cut(s)	122, 228, 377, 632, 842, 1134, 1293
MslI	CAYNNNNRTG	1 cut(s)	245
MspCI	CTTAAG	1 cut(s)	1133
MspI	CCGG	3 cut(s)	99, 485, 1384
MspR9I	CCNGG	3 cut(s)	113, 305, 485
MunI	CAATTG	1 cut(s)	187
Mva1269I	GAATGC	1 cut(s)	433
MvaI	CCWGG	2 cut(s)	113, 305
MvnI	CGCG	1 cut(s)	1356
MwoI	GCNNNNNNNGC	3 cut(s)	299, 560, 827
NciI	CCSGG	1 cut(s)	485
NdeI	CATATG	1 cut(s)	1173
NdeII	GATC	4 cut(s)	39, 128, 658, 1303
NlaIII	CATG	9 cut(s)	356, 749, 1219, 1256, 1277, 1310, 1411, 1426, 1457
NlaIV	GGNNCC	2 cut(s)	118, 489
NmuCI	GTSAC	4 cut(s)	7, 457, 1189, 1206
NspI	RCATGY	1 cut(s)	1256
PaeR7I	CTCGAG	1 cut(s)	347
PagI	TCATGA	2 cut(s)	1306, 1422
PceI	AGGCCT	1 cut(s)	1109
PciI	ACATGT	1 cut(s)	1252
PciSI	GCTCTTC	1 cut(s)	1454
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	433
PdmI	GAANNNNTTC	3 cut(s)	498, 768, 978
PfeI	GAWTC	4 cut(s)	172, 627, 769, 1138
PflMI	CCANNNNNTGG	1 cut(s)	1245
PinAI	ACCGGT	1 cut(s)	1383
PkrI	GCNGC	7 cut(s)	433, 482, 601, 604, 711, 832, 1279
Ple19I	CGATCG	1 cut(s)	131
PleI	GAGTC	1 cut(s)	220
PpsI	GAGTC	1 cut(s)	220
Ppu21I	YACGTR	1 cut(s)	1168
PscI	ACATGT	1 cut(s)	1252
PshBI	ATTAAT	1 cut(s)	377
PsiI	TTATAA	1 cut(s)	1146
Psp6I	CCWGG	2 cut(s)	111, 303
PspFI	CCCAGC	2 cut(s)	147, 221
PspGI	CCWGG	2 cut(s)	111, 303
PspN4I	GGNNCC	2 cut(s)	118, 489
PspPI	GGNCC	3 cut(s)	101, 301, 487
PspXI	VCTCGAGB	1 cut(s)	347
PstI	CTGCAG	2 cut(s)	835, 874
PvuI	CGATCG	1 cut(s)	131
RsaI	GTAC	6 cut(s)	239, 251, 1170, 1230, 1271, 1283
RsaNI	GTAC	6 cut(s)	238, 250, 1169, 1229, 1270, 1282
RseI	CAYNNNNRTG	1 cut(s)	245
SapI	GCTCTTC	1 cut(s)	1454
SaqAI	TTAA	7 cut(s)	122, 228, 377, 632, 842, 1134, 1293
SatI	GCNGC	7 cut(s)	432, 481, 600, 603, 710, 831, 1278
Sau3AI	GATC	4 cut(s)	39, 128, 658, 1303
Sau96I	GGNCC	3 cut(s)	101, 301, 487
SchI	GAGTC	1 cut(s)	221
ScrFI	CCNGG	3 cut(s)	113, 305, 485
SfaNI	GCATC	4 cut(s)	30, 634, 1018, 1426
SfcI	CTRYAG	2 cut(s)	831, 870
Sfr274I	CTCGAG	1 cut(s)	347
SinI	GGWCC	1 cut(s)	101
SlaI	CTCGAG	1 cut(s)	347
SmiMI	CAYNNNNRTG	1 cut(s)	245
SmlI	CTYRAG	4 cut(s)	347, 435, 564, 1133
SmoI	CTYRAG	4 cut(s)	347, 435, 564, 1133
SnaBI	TACGTA	1 cut(s)	1168
SseBI	AGGCCT	1 cut(s)	1109
SsiI	CCGC	3 cut(s)	245, 293, 1277
SspMI	CTAG	3 cut(s)	596, 864, 1391
StuI	AGGCCT	1 cut(s)	1109
StyD4I	CCNGG	3 cut(s)	111, 303, 483
StyI	CCWWGG	2 cut(s)	216, 1344
TaaI	ACNGT	2 cut(s)	7, 1206
TaiI	ACGT	3 cut(s)	529, 592, 1170
TaqI	TCGA	2 cut(s)	131, 348
TatI	WGTACW	2 cut(s)	237, 1228
TauI	GCSGC	1 cut(s)	1280
TfiI	GAWTC	4 cut(s)	172, 627, 769, 1138
Tru1I	TTAA	7 cut(s)	122, 228, 377, 632, 842, 1134, 1293
Tru9I	TTAA	7 cut(s)	122, 228, 377, 632, 842, 1134, 1293
TscAI	CASTG	1 cut(s)	1194
TseFI	GTSAC	4 cut(s)	7, 457, 1189, 1206
TseI	GCWGC	6 cut(s)	431, 480, 599, 602, 709, 830
Tsp45I	GTSAC	4 cut(s)	7, 457, 1189, 1206
TspDTI	ATGAA	3 cut(s)	787, 840, 1439
TspRI	CASTG	1 cut(s)	1194
Van91I	CCANNNNNTGG	1 cut(s)	1245
Vha464I	CTTAAG	1 cut(s)	1133
VpaK11BI	GGWCC	1 cut(s)	101
VspI	ATTAAT	1 cut(s)	377
XapI	RAATTY	1 cut(s)	284
XceI	RCATGY	1 cut(s)	1256
XhoI	CTCGAG	1 cut(s)	347
XmiI	GTMKAC	1 cut(s)	358
XmnI	GAANNNNTTC	3 cut(s)	498, 768, 978
XspI	CTAG	3 cut(s)	596, 864, 1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.