Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0002725

Physical Location & Seq

Genomic Coordinates Reverse (-)

10496877 .. 10506853

Gene Structure 9977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3948 bp

ATGGAAGAAGTATTTGCGACTGCCGCGCACTCGAGAAGAAGCAGCCAAGCGGACGAAGATGAAGAAGCTCTGACATGGGCTGCCATTGAGAAACTGCCCACGTATGATCGGCTAAGAACAAGCATCATCAAGTCCCTTGGGGAAACTGAGCCTCAAGGAGTACATAAGCAAGTAGACGTTCTACAGCTCGATATGGACGACCGTCAGAATTTCATTCAAAGGGTTTTCAAGGTTGCAGAGGAAGATAATGAGACGTTCCTGAAAAAGTTCAGAAGTAGAATTGATAAGGTTGGGATCAAACTTCCCACAGTGGAAGTAAGGTACGAGCATTTGACAATTGAAGCTGATTGCCATGTTGGAACAAGAGCTCTTCCCACCCTCCCAAATGTTGCTCGGAACATCGCAGAATCAGCTCTTGGCTTAATTGGGATTAAGTTGAATAAGCAAACAAAACTAACAATTCTCAAAGATGTCTCTGGCATTATTAAACCTTCAAGGATGGCCCTTTTATTAGGTCCTCCATCCTCGGGGAAGACTTCCCTTTTGCTGGCTTTAGCTGGGAAGTTGGATTCAAGCTTGAAGGTTAAGGGAGAGATAACTTACAATGGTCACCGGCTGAATGAGTTTGTGCCACGGAAGACATCTGCATATATTAGCCAAAACGATCTTCATGTTGGAAATATGACGGTCAAAGAAACACTAGATTTTTCAGCAAGGTGCCAAGGGGTTGGGACACGATATGAACTTCTTACTGAGCTTGCTAGAAGAGAAAAGGCCGCTGGAATATATCCAGAGCCCGAAGTAGACCTTTTCATGAAGGCTACTGCAATGGGAGGACTTGAGAGCAGTCTCATTACTGATTATACTCTCAAAATTTTGGGGCTTGATATATGTAAGGACACAATTGTTGGAGATGAGATGCAGAGAGGGATATCTGGTGGCCAGAAAAAACGAGTAACCACAGGTGAGATGATTGTTGGACCTACTACAACATTGTTCATGGATGAGATATCAACGGGTCTCGATAGCTCCACGACGTTCCAAATCGTGAAGTGCCTACAACAAATTGTACACATCACTGAGGCTACGATATTGATGTCTTTACTCCAACCTGCTCCTGAGACATTTGATCTTTTTGATGATATCATCCTTTTATCAGAAGGCCAGATCGTCTACCAGGGACCACGTGAGCACATATTAGAGTTTTTTGAGACATTTGGATTCCGATGCCCTGAGAGAAAAGGAACTGCCGATTTCTTACAAGAGGTTACCTCAAGAAAAGACCAGGAGCAGTATTGGGCAGACAGAAGGACTCCATACAGATATGTATCGGTCACAGAATTTGCAAACCGGTTCAAGCGTTTCCATGTGGGCATGAGGATAGCGGATGAGCTCTCAATCCCATTCGACAAGGCTCAAAGCCACAAAGCAGCTCTTGTATTCAAAACATATTCAATGCCCAAAATGCAGCTTCTCAAAGCATGTTTTGACAAAGAATGGCTGCTCATGCAGAGGAACTCATTTATTTACATTTTCAAGACTGTCCAAATTATAATAGGGGCAATCATAGCGGCGACAGTGTTTTTGAGGACCGAAATGCACACTAGAAATGAAAATGATGGAGCACTCTATGTTGGTGCACTTATATATTCCCTAATCATTAACATGTTTAATGGGTTTGCTGAGCTCTCATTGACCATTGCAAGACTTCCTGTGTTTTACAAGCATAGAGACCTTCTTTTCCACCCTGCTTGGACTTTCACTCTCCCATCTGTCCTGCTTGGGATTCCTATATCCATGATAGAATCTACTGTTTTCATAGGCATTACATACTACACCATTGGATTTGCACCTGAAGCTAGCAGGTTTTTCAAGCAACTATTGTTGATATTTCTGATGCAACAAATGGCATCTGCGCTATTTAGGCTTATTGCTGGAGTTAGCAGGACCATTGCTTTAGATAATGTTACCAGGGTGGGTGAGACAGTGCTTAATAACTTTGATGTTTACCACAACAAAAACTGGTTTTGGATTGGTTCTGGCGCTCTTCTGGGGTTTATTGTTCTCTTCAACTCCCTTTATACGGTCTCCCTTATGTACCTAAGTCCTCCTGGAAAGCCACAAGCCATCATATCTGAAGAGGCGGCAAACGAAATGGAGCTAGACCAAGAAGAATCAAAGGAAGAGCCAAGACTGAGAAGACCCCCATCCAAGAATGTTTCATTGCCTCGATCATTATCTTCTACTGATGGAAACAATACAAGAGAAATGGAAGTCCGACGAATGAGCAGTCGATCCAGCTCTAGTGGACTAGATAGAAATGCTGATTCATCTCTCGAAGTCTCTGGTGGCGTTGCCCCCAAGAGAGGAATGGTTCTACCTTTCACTCCTCTTGCAATGTCCTTCGACAGTGTTAATTATTTCGTGGACATGCCCGCTGAAATGAAGGAGGAAGGAGTAGCAGAGGACAGGCTGCAACTACTTCGTGAAGTAACTGGTGCATTTAGGCCTGGGGTCTTGACTGCCCTAATGGGGGTAAGTGGGGCTGGGAAGACAACTTTGATGGATGTCTTAGCAGGAAGAAAGACCGGAGGTTACATTGAAGGTGACATTAGAATTTCCGGGTACCCTAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGTTACTGTGAACAAACTGATATCCACTCACCCCAAGTCACTATAAAAGAATCGTTGGTTTACTCAGCTTTCCTTAGACTCCCTAAAGAAGTCAGCAACGAGGAAAAGATGATTTTTGTAGATCAAGTGATGGAACTGGTTGAGCTGGACAATCTTAAAAATGCCTTAGTAGGGCTTCCAGGAGTTTCAGGGCTGTCAACAGAACAAAGAAAGAGGTTAACGATTGCAGTTGAGCTTGTTGCCAATCCCTCAATCATTTTCATGGATGAACCAACATCAGGTCTTGATGCAAGGGCAGCTGCCATCGTTATGAGGACTGTTAGAAATACAGTGGACACTGGGAGAACAGTTGTTTGCACAATTCATCAGCCTAGCATAGATATCTTTGAGGCATTCGATGAGCTGCTACTGATGAAGAGAGGAGGACAAGTTATCTACTTAGGACCACTGGGCCGCAATTCTCACAAGATTGTTGAATATTTTGAGGCGGTTCCTGGTGTGCCAAAAATCAAAGAGAAGTACAATCCAGCTACATGGATGCTTGAGGCGAGCTCAACGTCAATTGAGGTCCGGCTTGGAATGGATTTTGCTCAATACTACAAATCATCAGCCTTGTATCAAAAAAGCAGTTCTGATATGTCCATGGTTATCGGGGCTATGTACGCTGCTGTCTTTTTTGTCGGATTTGATAACTGCACAACGGTGCAACCCATTGTCGCCATTGAAAGAACAGTTTTCTATCGAGAAAGAGCTGCTGGGATGTACTCTGCATTACCTTATGCACTGGCACAGACCACGTATTATACACTGATAGTGTATGCTATGGTGCACTTCCATTGGGAAGCAGGAAAATTCTTTTGGTTCTTCTTTATCAACTTCTTCTCCTTCCTTTACTTCACATACTACGGCATGATGACCGTTTCCATCACACCGAACCACCAAGTAGCAGCCATATTCGCCGCAGCTTTCTATTCAGTCTTCAATCTCTTCTCCGGTTTCTTCATTCCAAGACCAAAAATACCCAATTGGTGGATTTGGTACTACTGGATATGTCCCGTGGCATGGACGGTGTATGGATTGATTGTGACACAGTATGGTGACATTGAGAAGACCATTACAGCACCTGGGTATACACCTGACCCAACTGTGAAATGGTACCTAGAAGACCGTTACGGATTTAAATCAGATTTCAAGGGACCAGTGGCTGGAGTTCTAGTTGGATTCGGATTCTTCTTCGCCTTCATGTTTGCCTTCTGCATTAGGAAACTCAACTTCCAAGTTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1316

Amino Acids

148.17

Weight (kDa)

6.63

Isoelectric Point (pI)

37.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_trans_N	PF14510	80 - 130	2.4e-09	ABC-transporter N-terminal
ABC_tran	PF00005	155 - 336	2.9e-13	ABC transporter
ABC2_membrane	PF01061	491 - 651	1.1e-32	ABC-2 type transporter
PDR_assoc	PF08370	654 - 711	2.2e-22	Plant PDR ABC transporter associated
ABC_tran	PF00005	829 - 980	1.2e-19	ABC transporter
ABC2_membrane	PF01061	1095 - 1252	1.7e-37	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15210 AT1G59870 AT3G16340 AT3G16340
fragaria_vesca	FvH4_6g32310 FvH4_6g32310
malus_domestica	MD09G1203500.v1.1 MD09G1204000.v1.1 MD09G1204200.v1.1 MD09G1204300.v1.1 MD17G1184700.v1.1
prunus_persica	Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059900_v2.0.a1 Prupe.3G060000_v2.0.a1 Prupe.3G060000_v2.0.a1
pyrus_communis	pycom09g12060 pycom09g12080 pycom09g12130 pycom17g19420
rosa_chinensis	RchiOBHm_Chr2g0140401
rosa_laevigata	RLG00000019862
rosa_multiflora	Rmu_sc0008211.1_g000001 Rmu_sc0010411.1_g000005 Rmu_sc0019541.1_g000001 Rmu_sc0019542.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104910
rosa_rugosa	Rorug02G0361800 Rorug02G0361900 Rorug02G0362000 Rorug02G0362100 Rorug02G0362100
rosa_samantha	Rh2AG413100 Rh2BG423600 Rh2CG399300 Rh2DG432500
rosa_wichuraiana	Rw2G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1553
Acc36I	ACCTGC	2 cut(s)	1120, 1854
Acc65I	GGTACC	2 cut(s)	2625, 3816
AccB1I	GGYRCC	3 cut(s)	717, 2625, 3816
AccB7I	CCANNNNNTGG	2 cut(s)	3690, 3866
AccI	GTMKAC	4 cut(s)	174, 804, 1173, 3791
AccII	CGCG	1 cut(s)	26
AclWI	GGATC	2 cut(s)	302, 2289
AcoI	YGGCCR	1 cut(s)	940
AcsI	RAATTY	6 cut(s)	208, 873, 1340, 2616, 2655, 3512
AcuI	CTGAAG	2 cut(s)	1875, 2157
AcvI	CACGTG	1 cut(s)	1187
AflIII	ACRYGT	1 cut(s)	1665
AgeI	ACCGGT	1 cut(s)	1350
AjnI	CCWGG	8 cut(s)	1176, 1284, 1970, 2110, 2509, 2839, 3154, 3784
AjuI	GAANNNNNNNTTGG	6 cut(s)	399, 431, 651, 683, 3502, 3534
AleI	CACNNNNGTG	1 cut(s)	3362
Alw21I	GWGCWC	8 cut(s)	370, 1194, 1395, 1627, 1642, 1689, 3215, 3492
Alw44I	GTGCAC	2 cut(s)	1638, 3488
AlwI	GGATC	2 cut(s)	302, 2289
AlwNI	CAGNNNCTG	2 cut(s)	3785, 3866
Ama87I	CYCGRG	2 cut(s)	31, 526
AoxI	GGCC	6 cut(s)	501, 774, 940, 1162, 2507, 3112
ApaLI	GTGCAC	2 cut(s)	1638, 3488
ApoI	RAATTY	6 cut(s)	208, 873, 1340, 2616, 2655, 3512
ArsI	GACNNNNNNTTYG	6 cut(s)	526, 558, 1567, 1599, 2275, 2307
AsiGI	ACCGGT	1 cut(s)	1350
Asp700I	GAANNNNTTC	1 cut(s)	266
Asp718I	GGTACC	2 cut(s)	2625, 3816
AspLEI	GCGC	3 cut(s)	28, 1918, 2045
AsuC2I	CCSGG	1 cut(s)	2623
AsuHPI	GGTGA	6 cut(s)	602, 977, 1991, 2618, 2682, 3770
AsuNHI	GCTAGC	1 cut(s)	1859
AvaI	CYCGRG	2 cut(s)	31, 526
AvaII	GGWCC	8 cut(s)	515, 980, 1181, 1590, 1947, 3104, 3229, 3857
BaeGI	GKGCMC	2 cut(s)	1642, 3492
BalI	TGGCCA	1 cut(s)	942
BanI	GGYRCC	3 cut(s)	717, 2625, 3816
BanII	GRGCYC	5 cut(s)	370, 798, 1395, 1689, 3215
BbrPI	CACGTG	1 cut(s)	1187
BbsI	GAAGAC	7 cut(s)	539, 644, 2206, 2558, 3631, 3776, 3831
Bbv12I	GWGCWC	8 cut(s)	370, 1194, 1395, 1627, 1642, 1689, 3215, 3492
BceAI	ACGGC	1 cut(s)	3583
BcgI	CGANNNNNNTGC	2 cut(s)	2465, 2499
BciT130I	CCWGG	8 cut(s)	1178, 1286, 1972, 2112, 2511, 2841, 3156, 3786
BcnI	CCSGG	1 cut(s)	2623
BfmI	CTRYAG	1 cut(s)	182
BfoI	RGCGCY	1 cut(s)	2046
BfuAI	ACCTGC	2 cut(s)	1120, 1854
BlpI	GCTNAGC	1 cut(s)	1683
Bme1390I	CCNGG	9 cut(s)	1178, 1286, 1972, 2112, 2511, 2623, 2841, 3156, 3786
Bme18I	GGWCC	8 cut(s)	515, 980, 1181, 1590, 1947, 3104, 3229, 3857
BmeT110I	CYCGRG	2 cut(s)	31, 526
BmiI	GGNNCC	6 cut(s)	719, 1182, 2627, 3153, 3818, 3858
BmrFI	CCNGG	9 cut(s)	1178, 1286, 1972, 2112, 2511, 2623, 2841, 3156, 3786
BmrI	ACTGGG	2 cut(s)	3009, 3119
BmsI	GCATC	7 cut(s)	132, 909, 1217, 1887, 1919, 2938, 3189
BmtI	GCTAGC	1 cut(s)	1863
BmuI	ACTGGG	2 cut(s)	3009, 3119
BoxI	GACNNNNGTC	1 cut(s)	201
BpiI	GAAGAC	7 cut(s)	539, 644, 2206, 2558, 3631, 3776, 3831
BplI	GAGNNNNNCTC	4 cut(s)	1256, 1288, 3197, 3229
BpmI	CTGGAG	2 cut(s)	1956, 3888
Bpu1102I	GCTNAGC	1 cut(s)	1683
BpuEI	CTTGAG	4 cut(s)	138, 860, 1258, 3224
BpuMI	CCSGG	1 cut(s)	2623
BsaAI	YACGTR	3 cut(s)	102, 1187, 3459
BsaBI	GATNNNNATC	3 cut(s)	1327, 2236, 3841
BsaI	GGTCTC	3 cut(s)	1025, 1725, 2092
BsaWI	WCCGGW	3 cut(s)	1350, 2588, 3653
BsaXI	ACNNNNNCTCC	6 cut(s)	3075, 3105, 3527, 3557, 3861, 3891
Bse118I	RCCGGY	2 cut(s)	612, 1350
Bse1I	ACTGG	8 cut(s)	2027, 2500, 2802, 3004, 3114, 3450, 3710, 3860
Bse3DI	GCAATG	5 cut(s)	834, 1698, 1950, 2222, 2403
Bse8I	GATNNNNATC	3 cut(s)	1327, 2236, 3841
BseBI	CCWGG	8 cut(s)	1178, 1286, 1972, 2112, 2511, 2841, 3156, 3786
BseJI	GATNNNNATC	3 cut(s)	1327, 2236, 3841
BseMI	GCAATG	5 cut(s)	834, 1698, 1950, 2222, 2403
BseMII	CTCAG	8 cut(s)	138, 744, 1071, 1110, 1224, 1674, 2186, 2739
BseNI	ACTGG	8 cut(s)	2027, 2500, 2802, 3004, 3114, 3450, 3710, 3860
BseRI	GAGGAG	2 cut(s)	2379, 3096
BseSI	GKGCMC	2 cut(s)	1642, 3492
BseYI	CCCAGC	3 cut(s)	557, 2546, 3416
BsgI	GTGCAG	1 cut(s)	3340
Bsh1236I	CGCG	1 cut(s)	26
Bsh1285I	CGRYCG	1 cut(s)	202
BshFI	GGCC	6 cut(s)	503, 776, 942, 1164, 2509, 3114
BshNI	GGYRCC	3 cut(s)	717, 2625, 3816
BshTI	ACCGGT	1 cut(s)	1350
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	8 cut(s)	370, 1194, 1395, 1627, 1642, 1689, 3215, 3492
BsiHKCI	CYCGRG	2 cut(s)	31, 526
BsiSI	CCGG	6 cut(s)	613, 1351, 2589, 2622, 3232, 3654
BslFI	GGGAC	5 cut(s)	118, 745, 1194, 3699, 3870
BsmBI	CGTCTC	1 cut(s)	245
BsmFI	GGGAC	5 cut(s)	118, 745, 1194, 3699, 3870
BsmI	GAATGC	1 cut(s)	3053
BsnI	GGCC	6 cut(s)	503, 776, 942, 1164, 2509, 3114
Bso31I	GGTCTC	3 cut(s)	1025, 1725, 2092
BsoBI	CYCGRG	2 cut(s)	31, 526
Bsp1286I	GDGCHC	9 cut(s)	370, 798, 1194, 1395, 1627, 1642, 1689, 3215, 3492
Bsp1407I	TGTACA	1 cut(s)	1069
Bsp143I	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
Bsp1720I	GCTNAGC	1 cut(s)	1683
Bsp19I	CCATGG	1 cut(s)	3303
BspANI	GGCC	6 cut(s)	503, 776, 942, 1164, 2509, 3114
BspCNI	CTCAG	8 cut(s)	139, 745, 1072, 1111, 1225, 1675, 2187, 2738
BspFNI	CGCG	1 cut(s)	26
BspHI	TCATGA	1 cut(s)	813
BspLI	GGNNCC	6 cut(s)	719, 1182, 2627, 3153, 3818, 3858
BspMI	ACCTGC	2 cut(s)	1120, 1854
BspOI	GCTAGC	1 cut(s)	1863
BspPI	GGATC	2 cut(s)	302, 2289
BspQI	GCTCTTC	3 cut(s)	375, 2052, 2178
BspT107I	GGYRCC	3 cut(s)	717, 2625, 3816
BspTNI	GGTCTC	3 cut(s)	1025, 1725, 2092
BsrDI	GCAATG	5 cut(s)	834, 1698, 1950, 2222, 2403
BsrFI	RCCGGY	2 cut(s)	612, 1350
BsrGI	TGTACA	1 cut(s)	1069
BsrI	ACTGG	8 cut(s)	2027, 2500, 2802, 3004, 3114, 3450, 3710, 3860
BssAI	RCCGGY	2 cut(s)	612, 1350
BssMI	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
BssNAI	GTATAC	1 cut(s)	3792
BssT1I	CCWWGG	3 cut(s)	136, 721, 3303
Bst1107I	GTATAC	1 cut(s)	3792
Bst2UI	CCWGG	8 cut(s)	1178, 1286, 1972, 2112, 2511, 2841, 3156, 3786
Bst6I	CTCTTC	8 cut(s)	375, 760, 2052, 2072, 2133, 2178, 3071, 3653
BstAUI	TGTACA	1 cut(s)	1069
BstBAI	YACGTR	3 cut(s)	102, 1187, 3459
BstC8I	GCNNGC	5 cut(s)	549, 759, 1861, 2436, 3211
BstDSI	CCRYGG	3 cut(s)	632, 3303, 3717
BstEII	GGTNACC	2 cut(s)	608, 1267
BstFNI	CGCG	1 cut(s)	26
BstH2I	RGCGCY	1 cut(s)	2046
BstHHI	GCGC	3 cut(s)	28, 1918, 2045
BstKTI	GATC	8 cut(s)	109, 297, 667, 1132, 1170, 2234, 2297, 2785
BstMBI	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
BstMCI	CGRYCG	1 cut(s)	202
BstNI	CCWGG	8 cut(s)	1178, 1286, 1972, 2112, 2511, 2841, 3156, 3786
BstNSI	RCATGY	3 cut(s)	1485, 1669, 2434
BstPAI	GACNNNNGTC	1 cut(s)	201
BstPI	GGTNACC	2 cut(s)	608, 1267
BstSCI	CCNGG	9 cut(s)	1176, 1284, 1970, 2110, 2509, 2621, 2839, 3154, 3784
BstSFI	CTRYAG	1 cut(s)	182
BstSLI	GKGCMC	2 cut(s)	1642, 3492
BstUI	CGCG	1 cut(s)	26
BstV2I	GAAGAC	7 cut(s)	539, 644, 2206, 2558, 3631, 3776, 3831
BstXI	CCANNNNNNTGG	2 cut(s)	728, 3195
BstZ17I	GTATAC	1 cut(s)	3792
BsuRI	GGCC	6 cut(s)	503, 776, 942, 1164, 2509, 3114
BtgI	CCRYGG	3 cut(s)	632, 3303, 3717
BtgZI	GCGATG	1 cut(s)	385
BveI	ACCTGC	2 cut(s)	1120, 1854
Cac8I	GCNNGC	5 cut(s)	549, 759, 1861, 2436, 3211
CaiI	CAGNNNCTG	2 cut(s)	3785, 3866
CciI	TCATGA	1 cut(s)	813
CfoI	GCGC	3 cut(s)	28, 1918, 2045
Cfr10I	RCCGGY	2 cut(s)	612, 1350
CspAI	ACCGGT	1 cut(s)	1350
CspCI	CAANNNNNGTGG	2 cut(s)	1733, 1768
DpnI	GATC	8 cut(s)	108, 296, 666, 1131, 1169, 2233, 2296, 2784
DpnII	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
DraI	TTTAAA	1 cut(s)	3841
EaeI	YGGCCR	1 cut(s)	940
Eam1104I	CTCTTC	8 cut(s)	375, 760, 2052, 2072, 2133, 2178, 3071, 3653
EarI	CTCTTC	8 cut(s)	375, 760, 2052, 2072, 2133, 2178, 3071, 3653
Ecl136II	GAGCTC	4 cut(s)	368, 1393, 1687, 3213
Eco130I	CCWWGG	3 cut(s)	136, 721, 3303
Eco147I	AGGCCT	1 cut(s)	2509
Eco24I	GRGCYC	5 cut(s)	370, 798, 1395, 1689, 3215
Eco31I	GGTCTC	3 cut(s)	1025, 1725, 2092
Eco32I	GATATC	5 cut(s)	933, 1011, 1144, 2683, 3043
Eco47I	GGWCC	8 cut(s)	515, 980, 1181, 1590, 1947, 3104, 3229, 3857
Eco53kI	GAGCTC	4 cut(s)	368, 1393, 1687, 3213
Eco57I	CTGAAG	2 cut(s)	1875, 2157
Eco72I	CACGTG	1 cut(s)	1187
Eco88I	CYCGRG	2 cut(s)	31, 526
Eco91I	GGTNACC	2 cut(s)	608, 1267
EcoICRI	GAGCTC	4 cut(s)	368, 1393, 1687, 3213
EcoO109I	RGGNCCY	1 cut(s)	515
EcoO65I	GGTNACC	2 cut(s)	608, 1267
EcoRII	CCWGG	8 cut(s)	1176, 1284, 1970, 2110, 2509, 2839, 3154, 3784
EcoRV	GATATC	5 cut(s)	933, 1011, 1144, 2683, 3043
EcoT14I	CCWWGG	3 cut(s)	136, 721, 3303
EcoT38I	GRGCYC	5 cut(s)	370, 798, 1395, 1689, 3215
ErhI	CCWWGG	3 cut(s)	136, 721, 3303
Esp3I	CGTCTC	1 cut(s)	245
FalI	AAGNNNNNCTT	4 cut(s)	792, 824, 1419, 1451
FaqI	GGGAC	5 cut(s)	118, 745, 1194, 3699, 3870
FauI	CCCGC	1 cut(s)	2443
FblI	GTMKAC	4 cut(s)	174, 804, 1173, 3791
FriOI	GRGCYC	5 cut(s)	370, 798, 1395, 1689, 3215
GlaI	GCGC	3 cut(s)	27, 1917, 2044
GsaI	CCCAGC	3 cut(s)	561, 2550, 3420
GsuI	CTGGAG	2 cut(s)	1956, 3888
HaeII	RGCGCY	1 cut(s)	2046
HaeIII	GGCC	6 cut(s)	503, 776, 942, 1164, 2509, 3114
HapII	CCGG	6 cut(s)	613, 1351, 2589, 2622, 3232, 3654
HhaI	GCGC	3 cut(s)	28, 1918, 2045
Hin6I	GCGC	3 cut(s)	26, 1916, 2043
HinP1I	GCGC	3 cut(s)	26, 1916, 2043
HincII	GTYRAC	2 cut(s)	2859, 2880
HindII	GTYRAC	2 cut(s)	2859, 2880
HindIII	AAGCTT	1 cut(s)	574
HpaI	GTTAAC	1 cut(s)	2880
HpaII	CCGG	6 cut(s)	613, 1351, 2589, 2622, 3232, 3654
HphI	GGTGA	6 cut(s)	602, 977, 1991, 2618, 2682, 3770
Hpy99I	CGWCG	2 cut(s)	1039, 2283
HpyCH4IV	ACGT	7 cut(s)	101, 177, 254, 1037, 1186, 3218, 3458
HpySE526I	ACGT	7 cut(s)	101, 177, 254, 1037, 1186, 3218, 3458
HspAI	GCGC	3 cut(s)	26, 1916, 2043
KpnI	GGTACC	2 cut(s)	2629, 3820
KspAI	GTTAAC	1 cut(s)	2880
Kzo9I	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
LguI	GCTCTTC	3 cut(s)	375, 2052, 2178
LmnI	GCTCC	5 cut(s)	1034, 1120, 1288, 1622, 2158
LweI	GCATC	7 cut(s)	132, 909, 1217, 1887, 1919, 2938, 3189
MaeII	ACGT	7 cut(s)	101, 177, 254, 1037, 1186, 3218, 3458
MalI	GATC	8 cut(s)	108, 296, 666, 1131, 1169, 2233, 2296, 2784
MboI	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
MfeI	CAATTG	4 cut(s)	336, 903, 3222, 3685
MhlI	GDGCHC	9 cut(s)	370, 798, 1194, 1395, 1627, 1642, 1689, 3215, 3492
MlsI	TGGCCA	1 cut(s)	942
MluNI	TGGCCA	1 cut(s)	942
MlyI	GAGTC	2 cut(s)	1306, 2733
MmeI	TCCRAC	9 cut(s)	337, 546, 655, 889, 958, 1132, 2302, 3322, 3859
Mox20I	TGGCCA	1 cut(s)	942
MroXI	GAANNNNTTC	1 cut(s)	266
MscI	TGGCCA	1 cut(s)	942
MslI	CAYNNNNRTG	4 cut(s)	1664, 2921, 2969, 3362
Msp20I	TGGCCA	1 cut(s)	942
MspA1I	CMGCKG	3 cut(s)	779, 2438, 2960
MspI	CCGG	6 cut(s)	613, 1351, 2589, 2622, 3232, 3654
MspR9I	CCNGG	9 cut(s)	1178, 1286, 1972, 2112, 2511, 2623, 2841, 3156, 3786
MunI	CAATTG	4 cut(s)	336, 903, 3222, 3685
Mva1269I	GAATGC	1 cut(s)	3053
MvaI	CCWGG	8 cut(s)	1178, 1286, 1972, 2112, 2511, 2841, 3156, 3786
MvnI	CGCG	1 cut(s)	26
NciI	CCSGG	1 cut(s)	2623
NcoI	CCATGG	1 cut(s)	3303
NdeII	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
NheI	GCTAGC	1 cut(s)	1859
NlaIV	GGNNCC	6 cut(s)	719, 1182, 2627, 3153, 3818, 3858
NmuCI	GTSAC	6 cut(s)	608, 1333, 2606, 2698, 3745, 3758
NspI	RCATGY	3 cut(s)	1485, 1669, 2434
OliI	CACNNNNGTG	1 cut(s)	3362
PaeR7I	CTCGAG	1 cut(s)	31
PagI	TCATGA	1 cut(s)	813
PceI	AGGCCT	1 cut(s)	2509
PciI	ACATGT	1 cut(s)	1665
PciSI	GCTCTTC	3 cut(s)	375, 2052, 2178
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PctI	GAATGC	1 cut(s)	3053
PdmI	GAANNNNTTC	1 cut(s)	266
PflMI	CCANNNNNTGG	2 cut(s)	3690, 3866
PfoI	TCCNGGA	2 cut(s)	2110, 2839
PinAI	ACCGGT	1 cut(s)	1350
PleI	GAGTC	2 cut(s)	1306, 2733
PmaCI	CACGTG	1 cut(s)	1187
PmlI	CACGTG	1 cut(s)	1187
PpsI	GAGTC	2 cut(s)	1306, 2733
Ppu21I	YACGTR	3 cut(s)	102, 1187, 3459
PpuMI	RGGWCCY	1 cut(s)	515
PscI	ACATGT	1 cut(s)	1665
PshAI	GACNNNNGTC	1 cut(s)	201
PsiI	TTATAA	1 cut(s)	1553
Psp124BI	GAGCTC	4 cut(s)	370, 1395, 1689, 3215
Psp5II	RGGWCCY	1 cut(s)	515
Psp6I	CCWGG	8 cut(s)	1176, 1284, 1970, 2110, 2509, 2839, 3154, 3784
PspCI	CACGTG	1 cut(s)	1187
PspEI	GGTNACC	2 cut(s)	608, 1267
PspFI	CCCAGC	3 cut(s)	557, 2546, 3416
PspGI	CCWGG	8 cut(s)	1176, 1284, 1970, 2110, 2509, 2839, 3154, 3784
PspN4I	GGNNCC	6 cut(s)	719, 1182, 2627, 3153, 3818, 3858
PspPPI	RGGWCCY	1 cut(s)	515
PstNI	CAGNNNCTG	2 cut(s)	3785, 3866
PvuII	CAGCTG	1 cut(s)	2960
RseI	CAYNNNNRTG	4 cut(s)	1664, 2921, 2969, 3362
SacI	GAGCTC	4 cut(s)	370, 1395, 1689, 3215
SapI	GCTCTTC	3 cut(s)	375, 2052, 2178
Sau3AI	GATC	8 cut(s)	106, 294, 664, 1129, 1167, 2231, 2294, 2782
SchI	GAGTC	2 cut(s)	1306, 2733
ScrFI	CCNGG	9 cut(s)	1178, 1286, 1972, 2112, 2511, 2623, 2841, 3156, 3786
SduI	GDGCHC	9 cut(s)	370, 798, 1194, 1395, 1627, 1642, 1689, 3215, 3492
SfaNI	GCATC	7 cut(s)	132, 909, 1217, 1887, 1919, 2938, 3189
SfcI	CTRYAG	1 cut(s)	182
Sfr274I	CTCGAG	1 cut(s)	31
SinI	GGWCC	8 cut(s)	515, 980, 1181, 1590, 1947, 3104, 3229, 3857
SlaI	CTCGAG	1 cut(s)	31
SmiI	ATTTAAAT	1 cut(s)	3841
SmiMI	CAYNNNNRTG	4 cut(s)	1664, 2921, 2969, 3362
SmlI	CTYRAG	5 cut(s)	31, 153, 839, 1273, 3203
SmoI	CTYRAG	5 cut(s)	31, 153, 839, 1273, 3203
SseBI	AGGCCT	1 cut(s)	2509
SspI	AATATT	1 cut(s)	3140
SstI	GAGCTC	4 cut(s)	370, 1395, 1689, 3215
StuI	AGGCCT	1 cut(s)	2509
StyD4I	CCNGG	9 cut(s)	1176, 1284, 1970, 2110, 2509, 2621, 2839, 3154, 3784
StyI	CCWWGG	3 cut(s)	136, 721, 3303
SwaI	ATTTAAAT	1 cut(s)	3841
TaiI	ACGT	7 cut(s)	104, 180, 257, 1040, 1189, 3221, 3461
TaqII	GACCGA	2 cut(s)	1321, 1607
TatI	WGTACW	4 cut(s)	160, 1069, 3180, 3423
TauI	GCSGC	6 cut(s)	26, 779, 1574, 2147, 3117, 3623
TseFI	GTSAC	6 cut(s)	608, 1333, 2606, 2698, 3745, 3758
Tsp45I	GTSAC	6 cut(s)	608, 1333, 2606, 2698, 3745, 3758
TspGWI	ACGGA	2 cut(s)	649, 3849
Van91I	CCANNNNNTGG	2 cut(s)	3690, 3866
VneI	GTGCAC	2 cut(s)	1638, 3488
VpaK11BI	GGWCC	8 cut(s)	515, 980, 1181, 1590, 1947, 3104, 3229, 3857
XapI	RAATTY	6 cut(s)	208, 873, 1340, 2616, 2655, 3512
XceI	RCATGY	3 cut(s)	1485, 1669, 2434
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2368, 3810
XhoI	CTCGAG	1 cut(s)	31
XmiI	GTMKAC	4 cut(s)	174, 804, 1173, 3791
XmnI	GAANNNNTTC	1 cut(s)	266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.