pycom10g03210

Sucrose transport

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
3568196 .. 3571334
3139 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g03210.3

Sequence Viewer

Length: 1524 bp
ATGGAAGTTGAAAACGCCAACAAGAATCCTCACGCCGCGCAGGAGCAGCAGGCAAGCCCGCTGAAAAAAATCATCCTCGTCGCTTCCATTGCCGCCGGAGTCCAATTTGGATGGGCCCTACAACTCTCCCTCCTCACTCCCTACGTCCAGCTCCTCGGCGTCCCCCACACCTGGGCCGCCTTCATCTGGCTTTGCGGCCCCATCTCTGGCTTGCTCGTCCAGCCCATCGTCGGCTATCACAGCGACCGTTGCACTTCCCGCTTTGGACGCCGTCGCCCCTTCATCGCTGCTGGCTCCGCCCTCGTCGCCGTCGCCGTCTTCCTCATTGGCTACGCTGCTGATCTTGGACACCTCACTGGAGACTCCCTTGAGAAGGCCACCAAGCCCCGTGCCGTCTCCGTCTTCGTGGTCGGTTTCTGGATCCTCGACGTCGCCAACAACACGCTGCAAGGGCCATGCAGGGCCCTCCTCGCCGACATCTCGGGATCCAACCCGAAGAGAATGCGGACTTCCAACGCGCTGTTCGCCTTCTTCATGGCTGTCGGAAACATCCTCGGTTACGCCGCCGGGGCCTACAACAACCTCCACAAAATGTTCCCCTTCACCAAGACCAAAGCCTGCGACATCTACTGCGCCAATCTGAAGAGCTGCTTCTTCCTCTCCATCGCCCTCCTCATCACCCTCACCGTATTGGCCCTCACCATCGTCAAGGAAACCCCCGCCGACGTCGCTCCAGACGAGCCGGAGGAGGAGTCAACGACAGCTCCAAAGGTGCCCTTTTTTGGTCAAATGATTGGGGCATTCAAGGAGTTGCAAAGGCCAATGCTGGTGTTGCTTCTGGTGACGTGTCTGAACTGGATTGCGTGGTTCCCGTTCTTGCTGTTCGACACTGACTGGATGGGAAAGGAGGTGTACGGCGGCCAGGTCGGTAAAGGGCGACTGTACGATTTGGGGGTGAGAGCCGGTTCGCTCGGCCTCTTGCTAAACTCTGTCGTTTTGGGGTTCATGTCTCTCGGGGTCGAGCATCTCGGCCGTTGGGTTGGCGGGGTCAAGAGATTGTGGGCTATTGTCAACTTCTTGCTCGCCGTCTGCATGGCCTTGACTGTTTTAATCACTAAATTGGCTGAAGCCAGCCGACACGGCCACATCGGAGTTGAGCCGCCTCCGCCACCTGCCGGTATCAAGGCCGGCGCATTGTCTCTGTTCGCCGTGCTTGGCATTCCTCTAGCGGTGACGTACAGTATTCCCTTTGCTCTGGCTTCCATATTTTCCAGCAATTCTGGTGCAGGCCAAGGGCTTTCTTTGGGAGTCCTAAATCTTGCAATTGTCGTACCACAGATGTTTGTGTCCGTCGTAAGTGGACCGTGGGATGATTTGTTTGGAGGTGGTAATTTACCGGCATTTGTCGCCGGCGCGGTTGCTGCCGTCGCAAGTGGAATGTTGGCTCTCTTTATGCTACCGTCTCCGCCACCCGATCTTCCGTCGAACAAAAATGCAAGAGCTCCTGTTGTTGCCTTCCATTGA

Protein Analysis

508

Amino Acids

53.88

Weight (kDa)

8.94

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1180
AatII GACGTC 2 cut(s) 432, 729
Acc36I ACCTGC 1 cut(s) 1180
AccB1I GGYRCC 1 cut(s) 772
AccII CGCG 3 cut(s) 38, 518, 1415
AclWI GGATC 4 cut(s) 415, 428, 480, 493
AcoI YGGCCR 3 cut(s) 919, 1030, 1141
AcuI CTGAAG 2 cut(s) 662, 1146
AcyI GRCGYC 4 cut(s) 159, 268, 429, 726
AfaI GTAC 4 cut(s) 914, 944, 1238, 1332
AfiI CCNNNNNNNGG 8 cut(s) 171, 172, 186, 206, 230, 373, 782, 1175
AflIII ACRYGT 1 cut(s) 845
AgsI TTSAA 2 cut(s) 11, 805
AjiI CACGTC 1 cut(s) 846
AjnI CCWGG 2 cut(s) 170, 921
AjuI GAANNNNNNNTTGG 2 cut(s) 506, 538
AluBI AGCT 4 cut(s) 151, 648, 764, 1502
AluI AGCT 4 cut(s) 151, 648, 764, 1502
Alw21I GWGCWC 1 cut(s) 1504
Alw26I GTCTC 5 cut(s) 354, 400, 1014, 1203, 1467
AlwI GGATC 4 cut(s) 415, 428, 480, 493
Ama87I CYCGRG 2 cut(s) 481, 1013
ApaI GGGCCC 2 cut(s) 118, 466
ApeKI GCWGC 6 cut(s) 46, 287, 335, 445, 648, 1421
AspLEI GCGC 5 cut(s) 40, 520, 635, 1193, 1415
AsuC2I CCSGG 1 cut(s) 568
AsuHPI GGTGA 7 cut(s) 595, 670, 676, 691, 853, 967, 1243
AvaI CYCGRG 2 cut(s) 481, 1013
AvaII GGWCC 1 cut(s) 1361
BaeGI GKGCMC 3 cut(s) 118, 466, 777
BamHI GGATCC 2 cut(s) 420, 485
BanI GGYRCC 1 cut(s) 772
BanII GRGCYC 3 cut(s) 118, 466, 1504
BbsI GAAGAC 2 cut(s) 310, 394
Bbv12I GWGCWC 1 cut(s) 1504
BbvI GCAGC 6 cut(s) 58, 274, 322, 432, 635, 1408
BccI CCATC 6 cut(s) 105, 209, 233, 671, 710, 892
BcgI CGANNNNNNTGC 2 cut(s) 484, 518
BciT130I CCWGG 2 cut(s) 172, 923
BcnI CCSGG 1 cut(s) 568
BcoDI GTCTC 5 cut(s) 354, 400, 1014, 1203, 1467
BfaI CTAG 1 cut(s) 1226
BfuAI ACCTGC 1 cut(s) 1180
BglI GCCNNNNNGGC 2 cut(s) 569, 1140
Bme1390I CCNGG 3 cut(s) 172, 568, 923
Bme18I GGWCC 1 cut(s) 1361
BmeT110I CYCGRG 2 cut(s) 481, 1013
BmgBI CACGTC 1 cut(s) 846
BmiI GGNNCC 9 cut(s) 116, 199, 295, 422, 464, 487, 571, 774, 869
BmrFI CCNGG 3 cut(s) 172, 568, 923
BmsI GCATC 1 cut(s) 1033
BpiI GAAGAC 2 cut(s) 310, 394
BpmI CTGGAG 2 cut(s) 378, 717
BpuEI CTTGAG 1 cut(s) 389
BpuMI CCSGG 1 cut(s) 568
BsaHI GRCGYC 4 cut(s) 159, 268, 429, 726
BsaJI CCNNGG 6 cut(s) 154, 171, 553, 567, 1291, 1364
BsaXI ACNNNNNCTCC 6 cut(s) 114, 144, 737, 748, 767, 778
Bsc4I CCNNNNNNNGG 8 cut(s) 171, 172, 186, 206, 230, 373, 782, 1175
Bse118I RCCGGY 5 cut(s) 962, 1175, 1187, 1396, 1409
Bse1I ACTGG 3 cut(s) 361, 860, 899
Bse3DI GCAATG 1 cut(s) 87
BseBI CCWGG 2 cut(s) 172, 923
BseDI CCNNGG 6 cut(s) 154, 171, 553, 567, 1291, 1364
BseGI GGATG 5 cut(s) 72, 116, 549, 903, 1375
BseLI CCNNNNNNNGG 8 cut(s) 171, 172, 186, 206, 230, 373, 782, 1175
BseMI GCAATG 1 cut(s) 87
BseNI ACTGG 3 cut(s) 361, 860, 899
BseRI GAGGAG 6 cut(s) 122, 143, 458, 662, 761, 764
BseSI GKGCMC 3 cut(s) 118, 466, 777
BseX3I CGGCCG 1 cut(s) 1030
BseXI GCAGC 6 cut(s) 58, 274, 322, 432, 635, 1408
BsgI GTGCAG 1 cut(s) 1305
Bsh1236I CGCG 3 cut(s) 38, 518, 1415
Bsh1285I CGRYCG 2 cut(s) 247, 1033
BshNI GGYRCC 1 cut(s) 772
BsiEI CGRYCG 2 cut(s) 247, 1033
BsiHKAI GWGCWC 1 cut(s) 1504
BsiHKCI CYCGRG 2 cut(s) 481, 1013
BsiSI CCGG 8 cut(s) 96, 567, 743, 963, 1176, 1188, 1397, 1410
BslFI GGGAC 1 cut(s) 146
BslI CCNNNNNNNGG 8 cut(s) 171, 172, 186, 206, 230, 373, 782, 1175
BsmAI GTCTC 5 cut(s) 354, 400, 1014, 1203, 1467
BsmBI CGTCTC 2 cut(s) 400, 1467
BsmFI GGGAC 1 cut(s) 146
BsmI GAATGC 3 cut(s) 507, 800, 1218
BsoBI CYCGRG 2 cut(s) 481, 1013
Bsp120I GGGCCC 2 cut(s) 114, 462
Bsp1286I GDGCHC 4 cut(s) 118, 466, 777, 1504
Bsp143I GATC 4 cut(s) 340, 420, 485, 1474
BspFNI CGCG 3 cut(s) 38, 518, 1415
BspLI GGNNCC 9 cut(s) 116, 199, 295, 422, 464, 487, 571, 774, 869
BspMI ACCTGC 1 cut(s) 1180
BspPI GGATC 4 cut(s) 415, 428, 480, 493
BspQI GCTCTTC 1 cut(s) 638
BspT107I GGYRCC 1 cut(s) 772
BsrDI GCAATG 1 cut(s) 87
BsrFI RCCGGY 5 cut(s) 962, 1175, 1187, 1396, 1409
BsrI ACTGG 3 cut(s) 361, 860, 899
BssAI RCCGGY 5 cut(s) 962, 1175, 1187, 1396, 1409
BssECI CCNNGG 6 cut(s) 154, 171, 553, 567, 1291, 1364
BssMI GATC 4 cut(s) 340, 420, 485, 1474
BssNI GRCGYC 4 cut(s) 159, 268, 429, 726
BssT1I CCWWGG 1 cut(s) 1291
Bst2UI CCWGG 2 cut(s) 172, 923
Bst4CI ACNGT 7 cut(s) 248, 688, 942, 1105, 1241, 1365, 1461
Bst6I CTCTTC 2 cut(s) 491, 638
BstACI GRCGYC 4 cut(s) 159, 268, 429, 726
BstDSI CCRYGG 1 cut(s) 1364
BstENI CCTNNNNNAGG 1 cut(s) 371
BstF5I GGATG 5 cut(s) 72, 116, 549, 903, 1375
BstFNI CGCG 3 cut(s) 38, 518, 1415
BstHHI GCGC 5 cut(s) 40, 520, 635, 1193, 1415
BstKTI GATC 4 cut(s) 343, 423, 488, 1477
BstMAI GTCTC 5 cut(s) 354, 400, 1014, 1203, 1467
BstMBI GATC 4 cut(s) 340, 420, 485, 1474
BstMCI CGRYCG 2 cut(s) 247, 1033
BstNI CCWGG 2 cut(s) 172, 923
BstSCI CCNGG 3 cut(s) 170, 566, 921
BstSLI GKGCMC 3 cut(s) 118, 466, 777
BstUI CGCG 3 cut(s) 38, 518, 1415
BstV1I GCAGC 6 cut(s) 58, 274, 322, 432, 635, 1408
BstV2I GAAGAC 2 cut(s) 310, 394
BstX2I RGATCY 2 cut(s) 420, 485
BstYI RGATCY 2 cut(s) 420, 485
BstZI CGGCCG 1 cut(s) 1030
BtgI CCRYGG 1 cut(s) 1364
BtgZI GCGATG 2 cut(s) 268, 649
BtrI CACGTC 1 cut(s) 846
BtsCI GGATG 5 cut(s) 72, 116, 549, 903, 1375
BtsIMutI CAGTG 2 cut(s) 354, 888
BveI ACCTGC 1 cut(s) 1180
CfoI GCGC 5 cut(s) 40, 520, 635, 1193, 1415
Cfr10I RCCGGY 5 cut(s) 962, 1175, 1187, 1396, 1409
CseI GACGC 2 cut(s) 148, 276
Csp6I GTAC 4 cut(s) 913, 943, 1237, 1331
CviAII CATG 4 cut(s) 456, 535, 1006, 1093
CviQI GTAC 4 cut(s) 913, 943, 1237, 1331
DpnI GATC 4 cut(s) 342, 422, 487, 1476
DpnII GATC 4 cut(s) 340, 420, 485, 1474
EaeI YGGCCR 3 cut(s) 919, 1030, 1141
EagI CGGCCG 1 cut(s) 1030
Eam1104I CTCTTC 2 cut(s) 491, 638
EarI CTCTTC 2 cut(s) 491, 638
EciI GGCGGA 3 cut(s) 286, 1155, 1455
Ecl136II GAGCTC 1 cut(s) 1502
EclXI CGGCCG 1 cut(s) 1030
Eco130I CCWWGG 1 cut(s) 1291
Eco24I GRGCYC 3 cut(s) 118, 466, 1504
Eco47I GGWCC 1 cut(s) 1361
Eco52I CGGCCG 1 cut(s) 1030
Eco53kI GAGCTC 1 cut(s) 1502
Eco57I CTGAAG 2 cut(s) 662, 1146
Eco88I CYCGRG 2 cut(s) 481, 1013
EcoICRI GAGCTC 1 cut(s) 1502
EcoNI CCTNNNNNAGG 1 cut(s) 371
EcoO109I RGGNCCY 4 cut(s) 115, 462, 463, 570
EcoRII CCWGG 2 cut(s) 170, 921
EcoT14I CCWWGG 1 cut(s) 1291
EcoT38I GRGCYC 3 cut(s) 118, 466, 1504
ErhI CCWWGG 1 cut(s) 1291
Esp3I CGTCTC 2 cut(s) 400, 1467
FaeI CATG 4 cut(s) 459, 538, 1009, 1096
FaiI YATR 6 cut(s) 457, 536, 1007, 1094, 1265, 1454
FalI AAGNNNNNCTT 4 cut(s) 635, 667, 761, 793
FaqI GGGAC 1 cut(s) 146
FatI CATG 4 cut(s) 455, 534, 1005, 1092
FauI CCCGC 4 cut(s) 66, 266, 727, 1037
FokI GGATG 5 cut(s) 59, 123, 536, 910, 1382
FriOI GRGCYC 3 cut(s) 118, 466, 1504
FspBI CTAG 1 cut(s) 1226
GlaI GCGC 5 cut(s) 39, 519, 634, 1192, 1414
GsuI CTGGAG 2 cut(s) 378, 717
HapII CCGG 8 cut(s) 96, 567, 743, 963, 1176, 1188, 1397, 1410
HgaI GACGC 2 cut(s) 148, 276
HhaI GCGC 5 cut(s) 40, 520, 635, 1193, 1415
Hin1I GRCGYC 4 cut(s) 159, 268, 429, 726
Hin1II CATG 4 cut(s) 459, 538, 1009, 1096
Hin6I GCGC 5 cut(s) 38, 518, 633, 1191, 1413
HinP1I GCGC 5 cut(s) 38, 518, 633, 1191, 1413
HincII GTYRAC 2 cut(s) 756, 1072
HindII GTYRAC 2 cut(s) 756, 1072
HinfI GANTC 5 cut(s) 25, 99, 362, 752, 1308
HpaII CCGG 8 cut(s) 96, 567, 743, 963, 1176, 1188, 1397, 1410
HphI GGTGA 7 cut(s) 595, 670, 676, 691, 853, 967, 1243
Hpy166II GTNNAC 4 cut(s) 756, 913, 1072, 1361
Hpy188I TCNGA 4 cut(s) 545, 642, 852, 1151
Hpy188III TCNNGA 4 cut(s) 418, 483, 734, 1051
Hpy8I GTNNAC 4 cut(s) 756, 913, 1072, 1361
HpyAV CCTTC 5 cut(s) 190, 289, 367, 538, 610
HpyCH4III ACNGT 7 cut(s) 248, 688, 942, 1105, 1241, 1365, 1461
HpyCH4IV ACGT 5 cut(s) 144, 429, 726, 845, 1235
HpyCH4V TGCA 8 cut(s) 252, 448, 459, 814, 1092, 1286, 1322, 1496
HpySE526I ACGT 5 cut(s) 144, 429, 726, 845, 1235
Hsp92I GRCGYC 4 cut(s) 159, 268, 429, 726
Hsp92II CATG 4 cut(s) 459, 538, 1009, 1096
HspAI GCGC 5 cut(s) 38, 518, 633, 1191, 1413
KroI GCCGGC 2 cut(s) 1187, 1409
KroNI GCCGGC 2 cut(s) 1189, 1411
Kzo9I GATC 4 cut(s) 340, 420, 485, 1474
LguI GCTCTTC 1 cut(s) 638
LmnI GCTCC 6 cut(s) 43, 156, 299, 736, 769, 1507
Lsp1109I GCAGC 6 cut(s) 58, 274, 322, 432, 635, 1408
LweI GCATC 1 cut(s) 1033
MaeI CTAG 1 cut(s) 1226
MaeII ACGT 5 cut(s) 144, 429, 726, 845, 1235
MaeIII GTNAC 3 cut(s) 557, 841, 1231
MalI GATC 4 cut(s) 342, 422, 487, 1476
MboI GATC 4 cut(s) 340, 420, 485, 1474
MboII GAAGA 7 cut(s) 310, 394, 508, 523, 646, 655, 1469
MfeI CAATTG 1 cut(s) 1323
MflI RGATCY 2 cut(s) 420, 485
MhlI GDGCHC 4 cut(s) 118, 466, 777, 1504
MluCI AATT 5 cut(s) 104, 1118, 1276, 1323, 1390
MlyI GAGTC 4 cut(s) 108, 356, 761, 1317
MmeI TCCRAC 3 cut(s) 513, 523, 537
MreI CGCCGGCG 1 cut(s) 1409
MroNI GCCGGC 2 cut(s) 1187, 1409
MseI TTAA 1 cut(s) 1109
MspA1I CMGCKG 1 cut(s) 61
MspI CCGG 8 cut(s) 96, 567, 743, 963, 1176, 1188, 1397, 1410
MspR9I CCNGG 3 cut(s) 172, 568, 923
MunI CAATTG 1 cut(s) 1323
Mva1269I GAATGC 3 cut(s) 507, 800, 1218
MvaI CCWGG 2 cut(s) 172, 923
MvnI CGCG 3 cut(s) 38, 518, 1415
NaeI GCCGGC 2 cut(s) 1189, 1411
NciI CCSGG 1 cut(s) 568
NdeII GATC 4 cut(s) 340, 420, 485, 1474
NgoMIV GCCGGC 2 cut(s) 1187, 1409
NlaIII CATG 4 cut(s) 459, 538, 1009, 1096
NlaIV GGNNCC 9 cut(s) 116, 199, 295, 422, 464, 487, 571, 774, 869
NmeAIII GCCGAG 3 cut(s) 135, 951, 1008
NmuCI GTSAC 2 cut(s) 841, 1231
PaqCI CACCTGC 1 cut(s) 1180
PciSI GCTCTTC 1 cut(s) 638
PcsI WCGNNNNNNNCGW 2 cut(s) 312, 735
PctI GAATGC 3 cut(s) 507, 800, 1218
PdiI GCCGGC 2 cut(s) 1189, 1411
PfeI GAWTC 1 cut(s) 25
PflFI GACNNNGTC 1 cut(s) 270
PleI GAGTC 4 cut(s) 107, 356, 760, 1316
PpsI GAGTC 4 cut(s) 107, 356, 760, 1316
Psp124BI GAGCTC 1 cut(s) 1504
Psp6I CCWGG 2 cut(s) 170, 921
PspGI CCWGG 2 cut(s) 170, 921
PspN4I GGNNCC 9 cut(s) 116, 199, 295, 422, 464, 487, 571, 774, 869
PspOMI GGGCCC 2 cut(s) 114, 462
PsuI RGATCY 2 cut(s) 420, 485
PsyI GACNNNGTC 1 cut(s) 270
RsaI GTAC 4 cut(s) 914, 944, 1238, 1332
RsaNI GTAC 4 cut(s) 913, 943, 1237, 1331
SacI GAGCTC 1 cut(s) 1504
SapI GCTCTTC 1 cut(s) 638
SaqAI TTAA 1 cut(s) 1109
Sau3AI GATC 4 cut(s) 340, 420, 485, 1474
SchI GAGTC 4 cut(s) 108, 356, 761, 1317
ScrFI CCNGG 3 cut(s) 172, 568, 923
SduI GDGCHC 4 cut(s) 118, 466, 777, 1504
SfaNI GCATC 1 cut(s) 1033
SgrAI CRCCGGYG 1 cut(s) 1409
SinI GGWCC 1 cut(s) 1361
SmlI CTYRAG 1 cut(s) 368
SmoI CTYRAG 1 cut(s) 368
Sse9I AATT 5 cut(s) 104, 1118, 1276, 1323, 1390
SspMI CTAG 1 cut(s) 1226
SstI GAGCTC 1 cut(s) 1504
StyD4I CCNGG 3 cut(s) 170, 566, 921
StyI CCWWGG 1 cut(s) 1291
TaaI ACNGT 7 cut(s) 248, 688, 942, 1105, 1241, 1365, 1461
TaiI ACGT 5 cut(s) 147, 432, 729, 848, 1238
TaqI TCGA 4 cut(s) 426, 885, 1020, 1484
TasI AATT 5 cut(s) 104, 1118, 1276, 1323, 1390
TauI GCSGC 7 cut(s) 38, 95, 179, 198, 566, 921, 1162
TfiI GAWTC 1 cut(s) 25
Tru1I TTAA 1 cut(s) 1109
Tru9I TTAA 1 cut(s) 1109
TscAI CASTG 2 cut(s) 361, 895
TseFI GTSAC 2 cut(s) 841, 1231
TseI GCWGC 6 cut(s) 46, 287, 335, 445, 648, 1421
Tsp45I GTSAC 2 cut(s) 841, 1231
TspDTI ATGAA 4 cut(s) 172, 271, 523, 994
TspGWI ACGGA 3 cut(s) 388, 1339, 1470
TspRI CASTG 2 cut(s) 361, 895
Tth111I GACNNNGTC 1 cut(s) 270
VpaK11BI GGWCC 1 cut(s) 1361
XagI CCTNNNNNAGG 1 cut(s) 371
XspI CTAG 1 cut(s) 1226
ZraI GACGTC 2 cut(s) 430, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.